BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg913908 Length=369 Score E Sequences producing significant alignments: (Bits) Value AT1G48690.1 | Symbols: | Auxin-responsive GH3 family protein |... 287 5e-77 > AT1G48690.1 | Symbols: | Auxin-responsive GH3 family protein | chr1:18009057-18009989 REVERSE LENGTH=732 Length=732 Score = 287 bits (155), Expect = 5e-77 Identities = 219/250 (88%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 64 TCTGGAACTTCTGGAGGGAAACAAAAGATCTTTCCTGTGAACAACAAGTACTTCGAGAAT 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 382 TCTGGAACTTCTGGAGGGAAACAAAAGATCTTTCCTGTGAACAACAAGTACTTCGAGAAT 441 Query 124 ATGGCATTCATCAATGGTCTATGCTCCTCCATTCTATCCAAGTACATCGATGGTGTCAGG 183 ||| ||||||| | | | ||||||| |||| | ||||||||||||||||||| | || Sbjct 442 ATGATATTCATCCACGCTTTATGCTCGTCCACTATATCCAAGTACATCGATGGCATTGGG 501 Query 184 AAAGGAAAGGTGATGACGTTTCTCAACACTAGACCGTTGTC-TACAACTCCCTCTGGTTT 242 ||||||| |||||| |||||||||| ||||||||||| | || ||||||||||||||| Sbjct 502 GAAGGAAAAGTGATGGCGTTTCTCAATACTAGACCGTT-TAGTAAAACTCCCTCTGGTTT 560 Query 243 GCCTATTGCTCCCCTGTCTACGAGCTTC-CTAATGAGTGATTATTTCAAGAACCTGCCTT 301 |||| ||||||| || ||||| ||||| ||| ||||||||||||||||||||| ||| | Sbjct 561 GCCTGTTGCTCCTCTATCTACAAGCTTTGCTA-TGAGTGATTATTTCAAGAACCGGCCAT 619 Query 302 CAAAATGTTA 311 |||| ||||| Sbjct 620 CAAAGTGTTA 629 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17342373405 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5