BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg913919 Length=1725 Score E Sequences producing significant alignments: (Bits) Value AT1G48800.1 | Symbols: | Terpenoid cyclases/Protein prenyltran... 1031 0.0 AT1G48820.1 | Symbols: | Terpenoid cyclases/Protein prenyltran... 514 1e-144 > AT1G48800.1 | Symbols: | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr1:18049844-18052975 FORWARD LENGTH=1812 Length=1812 Score = 1031 bits (558), Expect = 0.0 Identities = 616/645 (96%), Gaps = 0/645 (0%) Strand=Plus/Plus Query 1081 GATTATTTAAAATCTGTGGCTAAATTTATATTTAATACCTTCCAAGAGTTTGAAAGAGAA 1140 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct 1168 GATTATTTAAAATCTGTGGCCAAATTTATATTTCATACCTTCCAAGAGTTTGAAAGAGAA 1227 Query 1141 GTGGGGTCAGAATCAGGAGGATCTTACAGCTTGAAAGCTACAATTGAAGACTGCAAGAGA 1200 ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1228 GTGTCGTCAGAATCAGGAGGATCTTACAGCTTGAAAGCTACAATTGAAGATTGCAAGAGA 1287 Query 1201 ATGATGAGAAGCAATCTTCAACTGGCCAAATGGGCAGTAACGGGTCACTTGCCTGGCTTT 1260 |||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 1288 ATGATGAGAAGCAACCTTCAACTTGCCAAATGGGCAGTAACGGGTCACTTGCCTAGCTTT 1347 Query 1261 GATGAGTACCTAGATGTTGCTGGAGTCGAGATAGCCATAGATTTTACCTTGGCAGGTATT 1320 ||||||||||||||||| |||||||||||||| ||| || |||||||| ||||||||||| Sbjct 1348 GATGAGTACCTAGATGTCGCTGGAGTCGAGATCGCCGTATATTTTACCGTGGCAGGTATT 1407 Query 1321 TTGTTGGGTATGGACAATATCAACAAGAAAGAAGCTTATGAGTGGTTGATATTTAGAGAC 1380 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1408 TTGTTGGGCATGGAAAATATCAACAAGAAAGAAGCTTATGAGTGGTTGATATTTAGAGAC 1467 Query 1381 AAACTCGTTAGAGCAATGTCTACAAAAGCAAGACTGGTGAATGATTTGTTTGGCTATAAG 1440 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1468 AAACTCGTAAGAGCAATGTCTACAAAAGCACGACTGGTGAATGATTTGTTTGGCTATAAG 1527 Query 1441 GATGACATGAGGAGAGGATATGTCACGAACTCGATTAACTGTTATAAGAAGCAATATGGA 1500 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1528 GATGACATGAGGAGAGGATATGTCACGAACTCGATCAACTGTTATAAGAAGCAATATGGA 1587 Query 1501 GTTACCGAAGAAGAAGCCTTTAGAAAGCTTCATCAAATAGTTGCGGAAGGTGATAAGATG 1560 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1588 GTTACCGAAGAAGAAGCCTTTAGAAAGCTTCATCAAATGGTTGCGGACGGTGATAAGATG 1647 Query 1561 ATGAATGAGGAGTTTTTGAAGCCAATCAATGTGCCACATCAGGTTCTAAAAGCAGTCCTC 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1648 ATGAATGAGGAGTTTTTGAAGCCAATCAATGTGCCACATCAGGTTCTAAAAGCAGTCCTC 1707 Query 1621 GACACGTTACGTGCGGTTAATATTTGCTACGACAATGAAGATGGATTTACCCGTCTCGAT 1680 ||||| |||||||| |||| |||||||||||||||||||||||||||||||| ||| || Sbjct 1708 GACACTTTACGTGCAATTAACATTTGCTACGACAATGAAGATGGATTTACCCGACTCAAT 1767 Query 1681 GGCAATCTCAAGAACTACATCACGTCTATGTACGTTGATATTTGA 1725 || ||||| |||||||||||||||||||||||||||||| ||||| Sbjct 1768 GGTAATCTGAAGAACTACATCACGTCTATGTACGTTGATCTTTGA 1812 Score = 1020 bits (552), Expect = 0.0 Identities = 680/740 (92%), Gaps = 15/740 (2%) Strand=Plus/Plus Query 1 ATGGAAGCCATAAGAGTTTTTGGACCAAAACTTGGATCTAAACTCTCTATTCGTTCTCAG 60 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1 ATGGAAGCCATAAGAGTTTTTGGACCAAAACTTGGATCTAGACTCTCTATTCGTTCTCAC 60 Query 61 ACCAGTGCATTTCCGCCATGCAAACTCTCTCCCTTTCCGCTGAC-TCAAATTT-CCAGCA 118 |||| |||||||||| ||||||||||||||| ||||||||| || || |||| || | | Sbjct 61 ACCACTGCATTTCCGGCATGCAAACTCTCTCGCTTTCCGCTAACGTC--ATTTCCCGGTA 118 Query 119 AGCCTCTC-CATCTTATTCCTTTGAGGGCCACTACTATTCCTCTGGCTTGTGATGATAAA 177 ||| | | |||||| ||| ||||| ||||||||||||||||||||| | || ||| ||| Sbjct 119 AGCAT-GCACATCTTGTTCTTTTGAAGGCCACTACTATTCCTCTGGCGTCTGGTGACAAA 177 Query 178 GAAAATAATCGCAAATTCGAAAAGTTGGGTCCTTCTGAATGGGGTC-ATCAATTCCTCTC 236 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | Sbjct 178 GAAAATAATCGCAAATTCGAAAAGTTGGGTCCTTCTGAATGGGG-CAATCAATTCCTTTT 236 Query 237 TGCTCATGTTGATCTCTCAGAAATGGAGGCGCTCGGGAGAGAGATAGAGGCACTAAAGCC 296 ||||||||||||||||||||||||||| ||||| | ||||||||| |||||||||||||| Sbjct 237 TGCTCATGTTGATCTCTCAGAAATGGATGCGCTTGAGAGAGAGATTGAGGCACTAAAGCC 296 Query 297 GAAAGTGAGGGACATGTTCAAGTCTTTCAAAGGAATGAAGTCGAACAAGAAGAATTT-TC 355 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 297 GAAAGTGAGGGACATGTTCATGTCTTTCAAAGGAATGAAGTCGAACAAGAAGAATTTGT- 355 Query 356 TTTTAATATATTTGCTTGTGAGTCTTGGTCTCGCACATCATTTCGAGGATGAGATCGAGA 415 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 356 TTTTGATATATTTGCTTGTGAGTCTTGGTCTCGCTCATCATTTCGAGGATGAGATCGAGG 415 Query 416 AGAGTATCAAA-GATGATTCCCAAGAGATGGAGGAGATGATGG-CGGGTGAAAATGATTT 473 ||||| ||||| | || |||||||||||||| ||||||||||| | |||||||||||||| Sbjct 416 AGAGTGTCAAAGGTTG-TTCCCAAGAGATGGTGGAGATGATGGAC-GGTGAAAATGATTT 473 Query 474 GTACACAGTTTCCATCATCTTCTGGGTTTTCAGGACATATGGTCACAACATTTCTTCCGA 533 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 474 GTACACAGTTTCCATCATCTTCTGGGTTTTCAGGACATATGGTCACAACATTTCTTCTGA 533 Query 534 TGTTTTTAACAGATTCAAAGGGGACAACGGAAAATTTAAGGAATGTCTTGCCACCGATGC 593 | ||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||| Sbjct 534 TATTTTTAACAGATTTAAAGGACACAATGGAAAGTTTAAGGAATGTCTTGCCACCGATGC 593 Query 594 TAAGGGTATCCTGAGCTTGTATGAAGCTGCTCACATGGGGACGACGACCGATTATATATT 653 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 594 TAAGGGTATCCTAAGCTTGTATGAAGCTGCTCACATGGGGACGACAACCGATTATATATT 653 Query 654 GGATGAAGCCTTGAGCTTCGCATTGAGTTACTTGAAGTCGTTAGCAGCAAGTGGGATATG 713 ||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||| ||| Sbjct 654 GGATGAAGCCTTGAGCTTCACATTGAGTTACTTGGAGTCGTTAGCTGCAAATGGGACATG 713 Query 714 CAAACCTAATCTC-TCAGGC 732 ||||||||||||| | |||| Sbjct 714 CAAACCTAATCTCGTGAGGC 733 Score = 508 bits (275), Expect = 5e-143 Identities = 313/332 (94%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 736 AAGAACGTGGAGATATTAGTCGCAAAGGAATATATCCGGTTCTATAAACAAGAAGAAGAT 795 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 766 AAGAACGTGGAGATATTAGTCGCAAAGGAATATATCCGGTTCTACGAACAAGAAGAAGAT 825 Query 796 TGCGATAATACGCTACTCAAGTTTGCCAAGCTTAACCTCAAATTCCTACAGCTACATTAC 855 |||||||| || ||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct 826 TGCGATAAGACTATACTCGAGTTTTCCATGCTTAACCTCAAATTCCTACAGCTACATTAC 885 Query 856 CTTCAAGAACTCAAAATCCTTTCAAAATGGTACAAGGAACAAGACTTTGAATCTAAGTTG 915 ||||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||||| Sbjct 886 CTTCAAGAACTCAAACTTCTTACAAAATGGTACAAGGAACAAGACTTTGAATCCAAGTTG 945 Query 916 CCACCTTACTACAGAGACAGAATCGCGGAACTGCACCTCGCTACGCTAGCATACATCAAT 975 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 946 CCACCTTACTACAGAGACAGAATCGTGGAACTGCACCTCGCTACGCTAGCATACATCAAT 1005 Query 976 CCAAAATACTCACGTGTGAGAATTTTTCTGACTAAGATTTACACGATTCAAATAATTCTA 1035 || ||||||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||| Sbjct 1006 CCGAAATACTCACGTGTGAGGATTATTCTGACTATGATTTACACTATTCAAATAATTCTA 1065 Query 1036 GATGATACATGTGACAGATATGCTTCTCTTCG 1067 |||||||| ||||||||||||||||||||||| Sbjct 1066 GATGATACGTGTGACAGATATGCTTCTCTTCG 1097 > AT1G48820.1 | Symbols: | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr1:18055229-18059367 FORWARD LENGTH=1686 Length=1686 Score = 514 bits (278), Expect = 1e-144 Identities = 457/542 (84%), Gaps = 17/542 (3%) Strand=Plus/Plus Query 1192 TGCAAGAGAAT-GATGAGAAGCAATCTTCAACTGGCCAAATGGGCAGTAA-CGGGTCACT 1249 |||||||| || | |||| | ||| |||||| | || ||||||| | || ||||||||| Sbjct 1150 TGCAAGAG-ATCGTTGAGGATCAACCTTCAAGTCGCTAAATGGGTA-AAAGCGGGTCACT 1207 Query 1250 TGCCTGGCTTTGATGAGTACCTAGATGTTGCTGGAGTCGAGATAGCCATAGATTTTACCT 1309 ||||| ||||||||||||||||||||||||||||| ||||| | || ||| |||||||| Sbjct 1208 TGCCTAGCTTTGATGAGTACCTAGATGTTGCTGGACTCGAGCTCGCTATATCTTTTACCT 1267 Query 1310 TGGCAGGTATTTTGTTGGGTATGGACAATATCAACAAGAAAGAAGCTTATGAGTGGTTGA 1369 | |||||||||||| |||||||||| ||| || |||| ||||||||||||||||||| Sbjct 1268 TCGCAGGTATTTTGATGGGTATGGAAAATGTCTGCAAGCCGGAAGCTTATGAGTGGTTGA 1327 Query 1370 TATTTAGAGACAAACTCGTTAGAGCAAT-GTCTACAAAAG-CAAGACTGGTGAATGATTT 1427 || |||||||||||||||||||| | | | |||||||| | || || |||||||| | Sbjct 1328 AATCTAGAGACAAACTCGTTAGAGGAGTAAT-TACAAAAGTC-CGATTGTTGAATGATAT 1385 Query 1428 GTTTGGCTATAAGGATGACATGAGGAGAGGATATGTCACGAACTCGATTAACTGTTATAA 1487 ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1386 CTTTGGCTATGAGGATGACATGAGGAGAGGATATGTCACGAACTCGATCAACTGTTATAA 1445 Query 1488 GAAGCAATATGGAGTTACCGAAGAAGAAGCCT-TTAGAAAGCTTCATCAAATAGTTGCGG 1546 ||||||||| |||||||| ||||||| || || ||||||||||||||||||| ||||| | Sbjct 1446 GAAGCAATACGGAGTTACGGAAGAAG-AGGCTATTAGAAAGCTTCATCAAATTGTTGCAG 1504 Query 1547 AAGGTGATAAGATGATGAATGAGGAGTTTTTGAAGCCAATCAATGTGCCACATCAGGTTC 1606 | ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1505 ACGGTGAAAAGATGATGAATGAGGAGTTTTTGAAGCCAATCAATGTGCCATACCAGGTTC 1564 Query 1607 TAAAAGCAGTC---CTCGACACGTTACGTGCGGTTAATATTTGCTACGACAATGAAGATG 1663 ||| | |||| |||||||| |||||||||| ||| | |||| || || || |||| Sbjct 1565 CAAAGGTAGTCATTCTCGACACTTTACGTGCGGCGAATGTCAGCTATGAAAAGGATGATG 1624 Query 1664 GATTTACCCGTC-TCGATGG-CAATCTCAAGAACTACATCACGTCTATGTACGTTGATAT 1721 ||||||||||| | | || || ||||||||||| ||||||||| || || ||||| | Sbjct 1625 AATTTACCCGTCCTGG-TGAACA-TCTCAAGAACTGCATCACGTCAATTTATTTTGATCT 1682 Query 1722 TT 1723 || Sbjct 1683 TT 1684 Score = 484 bits (262), Expect = 9e-136 Identities = 414/483 (86%), Gaps = 27/483 (6%) Strand=Plus/Plus Query 1 ATGGAAGCCATAAGAGTTTTTGGACCAAAACTTGGATCTAAACTCTCTATTCGTTCTCAG 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 1 ATGGAAGCCATAAGAGTTTTTGGACTAAAACTTGGATCTAAACTCTCTATTCATTCTCAG 60 Query 61 ACCAGTGCATTTCCGCCATGCAAACTCTCTCCCTTTCCGCTGAC-TCAAATTT-CCAGCA 118 |||| |||||||||| ||| |||||||||| |||||||||||| || |||| || | | Sbjct 61 ACCAATGCATTTCCGGCATTTAAACTCTCTCGCTTTCCGCTGACGTC--ATTTCCCGGAA 118 Query 119 AGCCTCTC-CATCTT-ATTCCTTTGAGGGCCACTACT-ATTCCTCTGGCTTGTGATGATA 175 ||| | | |||||| | |||||||| |||||||||| | |||| |||||| ||| | | Sbjct 119 AGCAT-GCACATCTTGA-TCCTTTGAAGGCCACTACTCA-TCCTTTGGCTTTTGACGGTG 175 Query 176 AAGAAAATAATCGCAAATTCGAAAAGTTGGGTCCTTCTGAATGGGGTCATCAATTCCTCT 235 |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 176 AAGAAAATAATCGCGAATTCAAAAATTTGGGTCCTTCTGAATGGGGTCATCAATTCCTCT 235 Query 236 CTGCTCATGTTGATCTCTCAGAAATGGAGGCGCTCGGGAGAGAGATAGAGGCACTAAAGC 295 |||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct 236 CTGCTCATGTTGATCTCTCAGAAATGGATGCGCTTGAGAGAGAGATAGAGGCACTAAAGC 295 Query 296 CGAAAGTGAGGGACATGTTCA-AGTCTTTCAAAGGAATGAAGTCGAACAAGAAGAATTTT 354 | ||||| ||||||||||| | | |||| | ||| ||||| ||||||||| | Sbjct 296 CAAAAGTAAGGGACATGTTGATA-TCTT-C-------TGA-GTCGAGCAAGAAGAAAATC 345 Query 355 CTTTTAATATATTTGCTTGTGAGTCTTGGTCTCGCACATCATTTCGAGGATGAGATCGAG 414 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 346 CTTTTTCTATATTTGCTTGTGAGTCTTGGTCTCGCATATCATTTCGAGGATGAGATCAAG 405 Query 415 -AAGAGTATCA-AAGATGAT-TCCCAAGAGATGGAGGAGATGATGGCGGGTGAAAATGAT 471 || ||| | | |||||| | | | || |||| |||||||||||||| ||||| ||||| Sbjct 406 GAA-AGTCT-AGAAGATGGTCTTCAAA-AGATAGAGGAGATGATGGCTAGTGAAGATGAT 462 Query 472 TTG 474 ||| Sbjct 463 TTG 465 Score = 250 bits (135), Expect = 4e-65 Identities = 173/191 (91%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 544 AGATTCAAAGGGGACAACGGAAAATTTAAGGAATGTCTTGCCACCGATGCTAAGGGTATC 603 ||||||||||| ||||| |||||||||||||||||||| || | ||||||||||||||| Sbjct 466 AGATTCAAAGGAGACAATGGAAAATTTAAGGAATGTCTAGCTAAAGATGCTAAGGGTATC 525 Query 604 CTGAGCTTGTATGAAGCTGCTCACATGGGGACGACGACCGATTATATATTGGATGAAGCC 663 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 526 CTGAGCTTGTATGAAGCTGCTCACATGGGAACAACGACCGATTATATATTGGATGAAGCC 585 Query 664 TTGAGCTTCGCATTGAGTTACTTGAAGTCGTTAGCAGCAAGTGGGA-TATGCAAACCTAA 722 ||||||||| |||||| |||| || |||||||||| |||||||||| | |||||| ||| Sbjct 586 TTGAGCTTCACATTGACTTACATGGAGTCGTTAGCTGCAAGTGGGACT-TGCAAAATTAA 644 Query 723 TCTCTCA-GGC 732 ||||||| ||| Sbjct 645 TCTCTCAAGGC 655 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85290725955 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5