BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg914009 Length=573 Score E Sequences producing significant alignments: (Bits) Value AT1G52470.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 418 3e-116 AT1G52460.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 67.6 1e-10 > AT1G52470.1 | Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:19553217-19555543 FORWARD LENGTH=1024 Length=1024 Score = 418 bits (226), Expect = 3e-116 Identities = 348/402 (87%), Gaps = 27/402 (7%) Strand=Plus/Plus Query 85 TACGACTTCGGATCTAATATCAAACAAGATGATCGAGAGGCAATAGATTCCGCAGCTAAA 144 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 338 TACGACTTCGGATCTAATATCAAACAAGATGATCGAGAGGCATTAGATTCCGCAGCTAAA 397 Query 145 CTTGTTGCTGG-CTTTTTGTTG-GCTGAACCACTAAATGTCGTAAAAGGAGTAGGAGGTT 202 ||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||| | Sbjct 398 TTTGTTGCTGATCTTTTA-TTGCG-TGAACCACTAAATGTCGTAAAAGGAGTAGGAGGCT 455 Query 203 TTGGCATGGGTGCAGTAGTTGCTCTCCAGTTTGCAACAAATTGTGCTCTTGGACATTATC 262 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 456 TTGGCATGGGTGCAGTAGTAGCTCTCCAATTTGCAACAAATTGTGCTCTTGGACATTATC 515 Query 263 CTTTAAGTCCCCGAGTTGTTGTTGGAATTAATGGATGGCTGTCTATT--G-----C---- 311 || ||| ||||||||||||||||||||||||||| ||||| |||||| | | Sbjct 516 CTATAAATCCCCGAGTTGTTGTTGGAATTAATGGGTGGCTTTCTATTACGGGGAGCATAA 575 Query 312 C--G--GTATAGAATCTACAGTTGGGGCTGTAGCTCGTGCTGCG-CAACAGAAAATCTTA 366 | | | ||||||| ||||||||||||||||||||||||||| || ||||||||||| Sbjct 576 CAAGCAGCATAGAATATACAGTTGGGGCTGTAGCTCGTGCTGCATCA-CAGAAAATCTT- 633 Query 367 TTTT-CACGTCCAACAGACGA-TCGTATACTTCCTTACACCAGTGAAAAAGAGGTTGTTG 424 |||| ||||| | |||| || |||| |||||||||||||| ||||| |||| ||||||| Sbjct 634 TTTTACACGTGGAGCAGA-GAATCGTCTACTTCCTTACACCCGTGAAGAAGAAGTTGTTG 692 Query 425 ACTCCCTTA-ACGAGGCTGGCTTCGGAGAAGTCTACTTCTTA 465 | ||||||| | |||||||| || ||||| |||| |||||| Sbjct 693 AGTCCCTTAGA-GAGGCTGGTTTTGGAGACGTCTTTTTCTTA 733 > AT1G52460.1 | Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:19549331-19551282 FORWARD LENGTH=828 Length=828 Score = 67.6 bits (36), Expect = 1e-10 Identities = 42/45 (93%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 38 AAGGAGACCAAAGGGTCACTATAGTATGGCTGCATGATAAGGATG 82 ||||||| || || ||||||||||||||||||||||||||||||| Sbjct 87 AAGGAGAGCATAGAGTCACTATAGTATGGCTGCATGATAAGGATG 131 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27528312556 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5