BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg914035
Length=1533
Score E
Sequences producing significant alignments: (Bits) Value
AT4G03930.1 | Symbols: | Plant invertase/pectin methylesterase... 1661 0.0
AT1G11590.1 | Symbols: | Plant invertase/pectin methylesterase... 1615 0.0
AT3G27980.1 | Symbols: | Plant invertase/pectin methylesterase... 1240 0.0
AT1G36700.1 | Symbols: | pseudogene, hypothetical protein | ch... 573 2e-162
> AT4G03930.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:1870422-1872387 FORWARD LENGTH=1575
Length=1575
Score = 1661 bits (899), Expect = 0.0
Identities = 1331/1535 (87%), Gaps = 47/1535 (3%)
Strand=Plus/Plus
Query 2 TGGTGATCGGAGTTTGCAAAGGATA---TGACAACAAACAGTCATGTCAAAATC-TTTTG 57
|||| || || ||| |||||| ||| ||| ||||||| ||||||||||| | |||||
Sbjct 47 TGGTTATTGGTGTTAGCAAAGAATATTGTGATGACAAACACTCATGTCAAAA-CTTTTTG 105
Query 58 TTGGAGCTCAAGAC-GGTATCCTCGTCACTCTCGAAGATGAGATGTCGTGATTTATTGAT 116
|||||||| ||||| | | ||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct 106 TTGGAGCTTAAGACAGCT-TCCTCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGAT 164
Query 117 CATCGTTTTGAAGAATTCCGTGTGGAGGATCGATATGGCTATGATTGGTGTGATGGAAGA 176
|||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||
Sbjct 165 CATCGTTTTGAAGAATTCCGTGCGGAAGATCGACATGGCTATGATTGGTGTGATGGAAGA 224
Query 177 TACAAAACTACTTGAGGAGATGGAGAATGATATGCT-TGGTGTGAAGGAGGACACAAATC 235
|||||||| || |||||||||||||||||||| ||| | || ||||||||||||||||||
Sbjct 225 TACAAAACAACATGAGGAGATGGAGAATGATAAGCTAT-GTTTGAAGGAGGACACAAATC 283
Query 236 TGTTTGAGGAAATGATGGAGTCGGCAAAAGATAGGATCATCCGTTCAGTGGAGGAACTCT 295
| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 284 TATTTGAGGAGATGATGGAGTCGGCAAAAGATAGGATGATCCGTTCAGTGGAGGAACTCT 343
Query 296 TAAGAGGAGAAAGCCATAATCTTGGATCTTACGAAAACGTCCACACTTGGCTCAGTGGTG 355
|| |||||||| || | |||||||||||||||||||| ||||||||||||||||||| |
Sbjct 344 TAGGAGGAGAATTCCCTTATCTTGGATCTTACGAAAACATCCACACTTGGCTCAGTGGCG 403
Query 356 TTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGAAGGTGCCTATAAACGTCGGG 415
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 404 TTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGACGGTGCCTATAAACGTCGGG 463
Query 416 TCGAGCCAGTGCTTGAGGACCTCATTTCTAGGGC-AAGAGTAGCTTTGGC-CATTTTTAT 473
|||||||| |||| | ||||||||||||| ||| ||| ||||||||||| | |||||||
Sbjct 464 TCGAGCCACAGCTTCAAGACCTCATTTCTAAGGCAAAG-GTAGCTTTGGCTC-TTTTTAT 521
Query 474 CTCTATTTCGCCGATAGACGACACCGAACTTAAGTCGGTGGTTCCCAATGGCCCATCTTG 533
||| |||||||||| |||| ||||||||||||| ||||||||||||||| |||| |||||
Sbjct 522 CTCCATTTCGCCGAGAGACAACACCGAACTTAACTCGGTGGTTCCCAATAGCCCGTCTTG 581
Query 534 GTTATCTAACGTTGACAAGAAATATCTATATCTCAATCCTGAGGTTCTAAAGAAGATTGC 593
||||||| | |||||||||||| |||||||||||||| |||||| |||||| ||||||||
Sbjct 582 GTTATCTCATGTTGACAAGAAAGATCTATATCTCAATGCTGAGGCTCTAAAAAAGATTGC 641
Query 594 CGATGTTGTGGTCGC-AAAGGATGGGATCGGAGATTACAACACATTGAATGAGGCCATTG 652
||||||||||||||| ||| ||||||| |||| | ||||||||| |||||| ||||||||
Sbjct 642 CGATGTTGTGGTCGCGAAA-GATGGGACCGGAAAGTACAACACAGTGAATGCGGCCATTG 700
Query 653 CAGTGGTACCTGAATACAGTCGA-AAGAGATTCGTCATCTATATAAAGACAGGCGTCTAT 711
||| | |||| || |||| | | ||||||||| |||||||||||||||||||| | |||
Sbjct 701 CAGCAGCACCTCAACACAG-CCACAAGAGATTCATCATCTATATAAAGACAGGCATTTAT 759
Query 712 GATGAAATTGTCCG-TATTGGGAGTACGAAAGCCAATTTAACTCTCATCGGTGATGGTCA 770
|||||||| || || |||| || ||||||| ||||||||||||| || |||||||||||
Sbjct 760 GATGAAATCGT-CGCCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCA 818
Query 771 AGATTCAACCATCATCACGGGCAATTTAAGCTATAATGATGGTAAAACAACGTTTC-AAA 829
||||||||||||||||||||||||||||||| || ||| || || |||| ||| | |
Sbjct 819 AGATTCAACCATCATCACGGGCAATTTAAGCGCTAGCAATGTTAGAAGAACG-TTCTACA 877
Query 830 CCGCAACTGTTGCTTCTAATGGTAATGGTTTCATCGGAATAGACATGTGCTTCCGGAACA 889
| |||||| |||||||||||||||| || ||||||||| |||||||||||||||| ||||
Sbjct 878 CTGCAACTTTTGCTTCTAATGGTAAAGGATTCATCGGAGTAGACATGTGCTTCCGAAACA 937
Query 890 CGGCT-GGACCGGCAAAGGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTC 948
||| | || |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 CGG-TCGGGCCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTC 996
Query 949 ATTTACCGATGTCGTATCGATGGG-TATCAGGATGCGTTGTATTCTCAAAGAGACCGCCA 1007
|||||| |||||||| |||| ||| ||||||||||| |||||| |||| | |||||||||
Sbjct 997 ATTTACAGATGTCGTGTCGA-GGGATATCAGGATGCCTTGTATCCTCACATAGACCGCCA 1055
Query 1008 ATTTTATAGGGAGTGCTTTATTACCGGCACTACAGATTTTATCTGTGGAAACGCCGCGGC 1067
|||||||||||||||||||||||||| ||| |||||| || ||||||||||| |||||
Sbjct 1056 GTTTTATAGGGAGTGCTTTATTACCGGTACTGTAGATTTCATTTGTGGAAACGCAGCGGC 1115
Query 1068 CGTCTTCCAATTCTGCCAAATTGTAGCAAGACTA-CCGA-TGAAAGGACATAGCAATGTG 1125
|| || ||||||||||| ||||||||||||| | || | | | || || |||||| |
Sbjct 1116 GGTATTTCAATTCTGCCAGATTGTAGCAAGAC-AGCCTAAT-ATGGGGCAAAGCAATTTC 1173
Query 1126 ATAACCGCTCAGTCACGC-ACAAGTATGGAAGACAACTCGGGCTTCTCCATTCAAAAATG 1184
||||||||||| |||||| | | || ||| ||||| ||||||||||| |||||||| ||
Sbjct 1174 ATAACCGCTCAATCACGCGAGAC-TAAGGACGACAAATCGGGCTTCTCAATTCAAAACTG 1232
Query 1185 CAATATCACTGCAAGTTCTGATCTAGATCCGGTTAAAGCAACCGTGAAGACGTAT-TTGG 1243
||| ||||| |||||||| ||||||||| | | |||||||| || |||||| ||||
Sbjct 1233 CAACATCACAGCAAGTTCGGATCTAGATAC----A--GCAACCGTAAAAACGTATCTTGG 1286
Query 1244 GTCGTCCATGGAGGA-ATTATTCAACAGTTGTGGTTCTACAATCTTTCATCGGTGATTTA 1302
| || ||||||| ||| ||||||||| | |||||| || ||||||||||||||||||
Sbjct 1287 AAGG-CCTTGGAGGATATT-TTCAACAGTCGCGGTTCTGCAGTCTTTCATCGGTGATTTA 1344
Query 1303 GTTGATCCCGCAGGCTGGACTCCTTGGAAAGGAGAAACTGGTCTATCAACTCTCTACTAC 1362
||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||
Sbjct 1345 GTTGATCCCGCAGGCTGGACTCCTTGGGAAGGAGAAACTGGTCTGTCAACTCTCCACTAC 1404
Query 1363 GGCGAATATCAAAACAGCGGTCTAGGAGCTGTGACTAGCAAAAGGGTAAAGTGGACAGGG 1422
||||||||||||| || |||| |||||||||||||||| |||||| |||||| | |||
Sbjct 1405 CGCGAATATCAAAATAGGGGTCCGGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTC-GGG 1463
Query 1423 -TTTAGAGTTATTACAGATCCTAAAGAGGCTACA-ACATTTACTGTTA-CCAAGCTATTA 1479
|||| |||||| | |||||||||| |||||||| | ||| ||||| | ||||||| |||
Sbjct 1464 CTTTAAAGTTATGAAAGATCCTAAACAGGCTACAGA-ATTCACTGT-AGCCAAGCTCTTA 1521
Query 1480 GACGGAGAATCGTGGCTGAAAGCAAGTGGAGTTCC 1514
|| |||||| | ||||| |||| |||| || ||||
Sbjct 1522 GATGGAGAAACTTGGCTAAAAGAAAGTCGAATTCC 1556
> AT1G11590.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr1:3892580-3894677 FORWARD LENGTH=1686
Length=1686
Score = 1615 bits (874), Expect = 0.0
Identities = 1312/1520 (86%), Gaps = 43/1520 (3%)
Strand=Plus/Plus
Query 2 TGGTGATCGGAGTTTGCAAAGGATA---TGACAACAAACAGTCATGTCAAAATC-TTTTG 57
|||| || || ||| |||||| ||| ||| ||||||||||||||||||| | |||||
Sbjct 101 TGGTTATTGGTGTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAA-CTTTTTG 159
Query 58 TTGGAGCTCAAGAC-GGTATCCTCGTCACTCTCGAAGATGAGATGTCGTGATTTATTGAT 116
|||||||| ||| | ||| || |||||||||||| |||| ||| ||||||| ||||||||
Sbjct 160 TTGGAGCTTAAGGCGGGT-TCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGAT 218
Query 117 CATCGTTTTGAAGAATTCCGTGTGGAGGATCGATATGGCTATGATTGGTGTGATGGAAGA 176
||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||
Sbjct 219 CATCGTTTTGAAGAATTCCGTACGGAGGATCGACATGGTTATGATTGGTGTGATGGATGA 278
Query 177 TACAAAACTACTTGAGGAGATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCT 236
|||||||| || ||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 279 TACAAAACAACATGAGGAGATGGAGAATGATTTGCTTGGTGTGAAGGAGGACACAAAACT 338
Query 237 GTTTGAGGAAATGATGGAGTCGGCAAAAGATAGGATCATCCGTTCAGTGGAGGAACTCTT 296
|||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||||||
Sbjct 339 ATTTGAGGAGATGATGGAGTCGACAAAAGATAGGATGATCCGTTCGGTGGAGGAACTCTT 398
Query 297 AAGAGGAGAA-AGCCATAATCTTGGATCTTACGAAAACGTCCACACTTGGCTCAGTGGTG 355
| |||||||| || ||||| |||||||||||| ||||||||||||||||||||| | |
Sbjct 399 AGGAGGAGAATTTCC-TAATCGTGGATCTTACGAGAACGTCCACACTTGGCTCAGTAGCG 457
Query 356 TTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGAAGGTGCCTATAAACGTCGGG 415
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 458 TTCTTACTAGTTACATCACATGTATCGACGAAATTGGTGAAGGTGCCTATAAACGCCGTG 517
Query 416 TCGAGCCAGTGCTTGAGGACCTCATTTCTAGGGCAAGAGTAGCTTTGGC-CATTTTTATC 474
|||||||| |||||| ||||||||||||||||||||| |||||||||| | | ||||||
Sbjct 518 TCGAGCCAAAGCTTGAAGACCTCATTTCTAGGGCAAGAATAGCTTTGGCTC-TCTTTATC 576
Query 475 TCTATTTCGCCGATAGACGACACCGAACTTAAGTCGGTGGTTCCCAATGGCCCATCTTGG 534
|| ||||| |||| |||| |||||||||||| |||||| |||||||| |||| ||||||
Sbjct 577 TCCATTTCACCGAGAGACAACACCGAACTTATCTCGGTGATTCCCAATAGCCCTTCTTGG 636
Query 535 TTA-TCTAACGTTGACAAGAAATATCTATATCTCAATCCTGAGGTTCTAAAGAAGATTGC 593
||| || | |||||||||||| |||||||||||||| |||||| |||||||||||||||
Sbjct 637 TTATTC-CATGTTGACAAGAAAGATCTATATCTCAATGCTGAGGCTCTAAAGAAGATTGC 695
Query 594 CGATGTTGTGGTCGCAAAGGATGGGATCGGAGATTACAACACATTGAATGAGGCCATTGC 653
|||||||||||||| |||||||||| |||| | |||| |||| |||||| |||||||||
Sbjct 696 TGATGTTGTGGTCGCGAAGGATGGGACCGGAAAGTACAGCACAGTGAATGCGGCCATTGC 755
Query 654 AGTGGTACCTGAATACAGTCGAAAGAGATTCGTCATCTATATAAAGACAGGCGTCTATGA 713
|| || |||| || |||| | ||||||||||||||||||||||||||||||| | |||||
Sbjct 756 AGCGGCACCTCAACACAGCCAAAAGAGATTCGTCATCTATATAAAGACAGGCATTTATGA 815
Query 714 TGAAATTGTCCGT-ATTGGGAGTACGAAAGCCAATTTAACTCTCATCGGTGATGGTCAAG 772
|||||| || ||| |||| || ||||||| ||||||||||||| || |||||||||||||
Sbjct 816 TGAAATCGT-CGTCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCAAG 874
Query 773 ATTCAACCATCATCACGGGCAATTTAA--GCTA-TAATGATGGTAAAACAACGTTTCAA- 828
||| ||||||||||||| ||||||||| |||| |||| | || || |||| |||||
Sbjct 875 ATTTAACCATCATCACGAGCAATTTAAGTGCTAGCAATG-T--TAGAAGAACG-TTCAAC 930
Query 829 ACCGCAACTGTTGCTTCTAATGGTAATGGTTTCATCGGAATAGACATGTGCTTCCGGAAC 888
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||
Sbjct 931 ACCGCAACTGTTGCTTCTAATGGTAATGGATTCATCGGAGTAGACATGTGCTTCCGAAAC 990
Query 889 ACGGCTGGACCGGCAAAGGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTC 948
||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 991 ACGGCCGGGCCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTC 1050
Query 949 ATTTACCGATGTCGTATCGATGGG-TATCAGGATGCGTTGTATTCTCAAAGAGACCGCCA 1007
||||| |||| ||| |||| ||| ||||||||||| |||||| |||| || ||||||||
Sbjct 1051 ATTTATAGATGCCGTGTCGA-GGGATATCAGGATGCCTTGTATCCTCACAGTGACCGCCA 1109
Query 1008 ATTTTATAGGGAGTGCTTTATTACCGGCACTACAGATTTTATCTGTGGAAACGCCGCGGC 1067
|||||||| ||||||||||||||||||||| |||||| || ||||| ||||| | |||
Sbjct 1110 GTTTTATAGAGAGTGCTTTATTACCGGCACTGTAGATTTCATTTGTGGGAACGCGGTGGC 1169
Query 1068 CGTCTTCCAATTCTGCCAAATTGTAGCAAGACTACCGATGAAAGGACATAGCAATGTGAT 1127
||||| ||||||||||| ||||||||||||| ||| | || || || |||||||| ||
Sbjct 1170 GGTCTTTCAATTCTGCCAGATTGTAGCAAGACAACCTAAGATGGGGCAGAGCAATGTCAT 1229
Query 1128 AACCGCTCAGTCACGCACAAGTATGGA-AGACAACTCGGGCTTCTCCATTCAAAAATGCA 1186
|||||||||||||||| || || ||| | | |||||||||| | |||||||||||||
Sbjct 1230 AACCGCTCAGTCACGCGCATTTAAGGACATTTA-CTCGGGCTTCACGATTCAAAAATGCA 1288
Query 1187 ATATCACTGCAAGTTCTGATCTAGATC-CGGTTAAAGCAACCGTGAAGACGTAT-TTGGG 1244
| || |||||||| || |||||||| | || | ||||||| || |||||| ||||
Sbjct 1289 ACATTACTGCAAGCTCGGATCTAGA-CACG---A---CAACCGTTAAAACGTATCTTGGA 1341
Query 1245 TCGTCCATGGAGGA-ATTATTCAACAGTTGTGGTTCTACAATCTTTCATCGGTGATTTAG 1303
| || ||||||| ||| ||||||||| | ||| | || |||||||||||||||||||
Sbjct 1342 A-GACCTTGGAGGATATT-TTCAACAGTCGCAGTTATGCAGTCTTTCATCGGTGATTTAG 1399
Query 1304 TTGATCCCGCAGGCTGGACTCCTTGGAAAGGAGAAACTGGTCTATCAACTCTCTACTACG 1363
|||||||||| ||||||||||||||| |||||||||||||| | ||||||||| |||||
Sbjct 1400 TTGATCCCGCTGGCTGGACTCCTTGGGAAGGAGAAACTGGTTTGTCAACTCTCCACTACC 1459
Query 1364 GCGAATATCAAAACAGCGGTCTAGGAGCTGTGACTAGCAAAAGGGTAAAGTGGACAGGGT 1423
|||||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||| |
Sbjct 1460 GCGAATATCAAAACAGGGGTCCAGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTCAGGCT 1519
Query 1424 TTAGAGTTATTACAGATCCTAAAGAGGCTACA-ACATTTACTGTTA-CCAAGCTATTAGA 1481
||| |||||| | |||||||||| |||||||| | ||| ||||| | ||||||| |||||
Sbjct 1520 TTAAAGTTATGAAAGATCCTAAACAGGCTACAGA-ATTCACTGT-AGCCAAGCTCTTAGA 1577
Query 1482 CGGAGAATCGTGGCTGAAAG 1501
|||||| | ||| ||||||
Sbjct 1578 TGGAGAAACTTGGTTGAAAG 1597
> AT3G27980.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:10393904-10395861 FORWARD LENGTH=1494
Length=1494
Score = 1240 bits (671), Expect = 0.0
Identities = 1028/1197 (86%), Gaps = 38/1197 (3%)
Strand=Plus/Plus
Query 336 CCACACTTGGCTCAGTGGTGTTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGA 395
|||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 315 CCACACTTGGCTTAGTAGCGTTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGA 374
Query 396 AGGTGCCTATAAACGTCGGGTCGAGCCAGTGCTTGAGGACCTCATTTCTAGGGCAAGAGT 455
||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||
Sbjct 375 AGGTGCCTATAAACGCCGGGTCGAGCCAAAGCTTGAAAACCTCATTTCTAGGGCAAGAGT 434
Query 456 AGCTTTGGC-CATTTTTATCTCTATTTCGCCGATAGACGACACCGAACTTAAGTCGGTGG 514
|| |||||| | |||||||||| ||||| | || |||| |||||||||||| ||||||
Sbjct 435 AGTTTTGGCTC-TTTTTATCTCCATTTCACTGAGAGACAACACCGAACTTATCTCGGTGA 493
Query 515 TTCCCAATGGCCCATCTTGGTTA-TCTAACGTTGACAAGAAATATCTATATCTCAATCCT 573
||||||||||||| ||||||||| || | |||||||||||| ||||||||||||| |
Sbjct 494 TTCCCAATGGCCCTTCTTGGTTATTC-CATGTTGACAAGAAAGATCTATATCTCAA---T 549
Query 574 GAGGTTCTAAAGAAGATTGCCGATGTTGTGGTCGCAAAGGATGGGATCGGAGATTACAAC 633
| || | ||||||| |||||||||||||| |||||||||| |||| | |||| |
Sbjct 550 ---G--CT---G-AGATTGCTGATGTTGTGGTCGCGAAGGATGGGACCGGAAAGTACAGC 600
Query 634 ACATTGAATGAGGCCATTGCAGTGGTACCTGAATACAGTCGAAAGAGATTCGTCATCTAT 693
||| |||||| ||||||||||| || |||| || |||| | |||||||||||||||||||
Sbjct 601 ACAGTGAATGCGGCCATTGCAGCGGCACCTCAACACAGCCAAAAGAGATTCGTCATCTAT 660
Query 694 ATAAAGACAGGCGTCTATGATGAAATTGTCCGT-ATTGGGAGTACGAAAGCCAATTTAAC 752
|||||||||||| | ||||||||||| || ||| |||| || ||||||| ||||||||||
Sbjct 661 ATAAAGACAGGCATTTATGATGAAATCGT-CGTCATTGAGAATACGAAACCCAATTTAAC 719
Query 753 TCTCATCGGTGATGGTCAAGATTCAACCATCATCACGGGCAATTTAAGCTATAATGATGG 812
||| || |||||||||||||||| |||||||||||| |||||||||||| || |||
Sbjct 720 TCTTATAGGTGATGGTCAAGATTTAACCATCATCACAGGCAATTTAAGCGCTAGCAATGT 779
Query 813 TAAAACAACGTTTCAA-ACCGCAACTGTTGCTTCTAATGGTAATGGTTTCATCGGAATAG 871
|| || |||| | ||| ||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 780 TAGAAGAACG-TACAACACCGCAACTGTTGCTTCTAATGGTAATGGATTCATCGGAGTAG 838
Query 872 ACATGTGCTTCCGGAACACGGCTGGACCGGCAAAGGGACCAGCTGTTGCCCTCCGTGTGA 931
|||||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 839 ACATGTGCTTTCGAAACACGGCCGGACCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGA 898
Query 932 GTGGTGATATGTCCGTCATTTACCGATGTCGTATCGATGGG-TATCAGGATGCGTTGTAT 990
|||||||||||||||||||||| |||||||| |||| ||| ||||||||||| ||||||
Sbjct 899 GTGGTGATATGTCCGTCATTTATAGATGTCGTGTCGA-GGGATATCAGGATGCCTTGTAT 957
Query 991 TCTCAAAGAGACCGCCAATTTTATAGGGAGTGCTTTATTACCGGCACTACAGATTTTATC 1050
|||| || |||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 958 CCTCATAGTGACCGCCAGTTTTATAGGGAGTGCTTTATTACCGGCACTGTAGATTTTATA 1017
Query 1051 TGTGGAAACGCCGCGGCCGTCTTCCAATTCTGCCAAATTGTAGCAAGACTA-CCGATGAA 1109
||||||||||| | ||| ||||| ||||||||||| ||||||||||||| | || | ||
Sbjct 1018 TGTGGAAACGCGGTGGCGGTCTTTCAATTCTGCCAGATTGTAGCAAGAC-AGCCTAAGAT 1076
Query 1110 AGGACATAGCAATGTGATAACCGCTCAGTCACGCACAAGTATGGAAGACAACTCGGGCTT 1169
|| || |||||||| ||||||||||| |||||| | | || ||| | ||| ||||||||
Sbjct 1077 GGGGCAGAGCAATGTCATAACCGCTCAATCACGCGCGACTAAGGACGTCAAATCGGGCTT 1136
Query 1170 CTCCATTCAAAAATGCAATATCACTGCAAGTTCTGATCTAGATCCGGTTAAAGCAACCGT 1229
||| |||||||| ||||| ||||| ||||||| ||||||||| | | ||||||||
Sbjct 1137 CTCAATTCAAAACTGCAACATCACAACAAGTTCGGATCTAGATAC----A--GCAACCGT 1190
Query 1230 GAAGACGTAT-TTGGGTCGTCCATGGAGGA-ATTATTCAACAGTTGTGGTTCTACAATCT 1287
|| |||||| |||| | || ||||||| ||| ||||||||| | |||||| ||||||
Sbjct 1191 AAAAACGTATCTTGGAA-GACCTTGGAGGAGATT-TTCAACAGTCGCGGTTCTGCAATCT 1248
Query 1288 TTCATCGGTGATTTAGTTGATCCCGCAGGCTGGACTCCTTGGAAAGGAGAAACTGGTCTA 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249 TTCATCGGTGATTTAGTTGATCCCGCAGGCTGGACTCCTTGGAAAGGAGAAACTGGTCTA 1308
Query 1348 TCAACTCTCTACTACGGCGAATATCAAAACAGCGGTCTAGGAGCTGTGACTAGCAAAAGG 1407
||||||||| ||||| ||||||||||||| || |||| |||||||||||||||| ||||
Sbjct 1309 TCAACTCTCCACTACCGCGAATATCAAAATAGGGGTCCGGGAGCTGTGACTAGCAGAAGG 1368
Query 1408 GTAAAGTGGACAGGGTTTAGAGTTATTACAGATCCTAAAGAGGCTACA-ACATTTACTGT 1466
|| |||||| |||| |||| |||||| | |||||||||| |||||||| | ||| |||||
Sbjct 1369 GTGAAGTGGTCAGGATTTAAAGTTATGAAAGATCCTAAAAAGGCTACAGA-ATTCACTGT 1427
Query 1467 TA-CCAAGCTATTAGACGGAGAATCGTGGCTGAAAGCAAGTGGAGTTCCGTACGAAA 1522
| ||||||| ||||| |||||| | |||||||||| |||| || |||| || ||||
Sbjct 1428 -AGCCAAGCTCTTAGATGGAGAAACTTGGCTGAAAGAAAGTCGAATTCCATATGAAA 1483
Score = 320 bits (173), Expect = 2e-86
Identities = 234/263 (89%), Gaps = 5/263 (2%)
Strand=Plus/Plus
Query 1 ATGGTGATCGGAGTTTGCAAAGGATA---TGACAACAAACAGTCATGTCAAAATCTTTTG 57
||||| || || ||| |||||| ||| ||| ||||||||||||||||||| ||||||
Sbjct 43 ATGGTAATTGGCGTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAACCTTTTG 102
Query 58 TTGGAGCTCAAGAC-GGTATCCTCGTCACTCTCGAAGATGAGATGTCGTGATTTATTGAT 116
|||||||| ||| | ||| || |||||||||||| |||| ||| ||||||| ||||||||
Sbjct 103 TTGGAGCTTAAGGCGGGT-TCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGAT 161
Query 117 CATCGTTTTGAAGAATTCCGTGTGGAGGATCGATATGGCTATGATTGGTGTGATGGAAGA 176
||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct 162 CATCGTTTTGAAGAATTCCGTACGGAGGATCGACATGGCTATGATTGGTGTGATGGATGA 221
Query 177 TACAAAACTACTTGAGGAGATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCT 236
|||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 222 TACAAAACAACATGAAGAGATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCT 281
Query 237 GTTTGAGGAAATGATGGAGTCGG 259
|||||||| |||||||||||||
Sbjct 282 ATTTGAGGAGATGATGGAGTCGG 304
> AT1G36700.1 | Symbols: | pseudogene, hypothetical protein |
chr1:13877990-13878553 REVERSE LENGTH=564
Length=564
Score = 573 bits (310), Expect = 2e-162
Identities = 426/478 (89%), Gaps = 23/478 (5%)
Strand=Plus/Plus
Query 33 CAAACAGTCATGTCAAAATC-TTTTGTTGGAGCTCAAGACGGTATCCTCGTCACTCTCGA 91
|||||||||||||||||| | ||||||||||||| ||||| || |||||||||||||| |
Sbjct 77 CAAACAGTCATGTCAAAA-CTTTTTGTTGGAGCTTAAGACAGTTTCCTCGTCACTCTCAA 135
Query 92 AGATGAGATGTCGTGATTTATTGATCATCGTTTTGAAGAATTCCGTGTGGAGGATCGATA 151
|||||||| | ||||| |||||||||||||||||||||||||||||| | ||||| || |
Sbjct 136 AGATGAGACGCCGTGACTTATTGATCATCGTTTTGAAGAATTCCGTGCG-AGGATTGACA 194
Query 152 TGGCTATGATTGGTGTGATGGAAGATACAAAACTACTTGAGGAGATGGAGAATGATATGC 211
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 195 TGGCTATGATTGGTGTGATGGAAGAGACAAAACAACTTGAGGAGATGGAGAATGATATGC 254
Query 212 TTGGTGTGAAGGAGGACACAAATCTGTTTGAGGAAATGATGGAGTCGGCAAAAGATAGGA 271
||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||||||
Sbjct 255 TTGGTGTGAAGGAGGACACAAATCTATTTGAAGAGATGATGGAGTTGGCAAAAGATAGGA 314
Query 272 TCATCCGTTCAGTGGAGGAACTCTTAAGAGGAGAAAGCCATAATCTTGGATCTTACGAAA 331
| ||||||| | |||| | | |||||||| ||||||||||||||||||||
Sbjct 315 TGATCCGTTT--T--AGGA--------G-G-AGAAAGCCCTAATCTTGGATCTTACGAAA 360
Query 332 ACGTCCACACTTGGCTCAGTGGTGTTCTTACTAGCTACATCACATGTATCGACGAAATTG 391
|||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 361 ACGTCCACACTTAGCTTAGTGGCGTTCTTACTAGCTACATCACATGTATCAACGAAATTG 420
Query 392 GTGAAGGTGCCTATAAACG-TCGGGTCGAGCCAGTGC-TTGAGGACCTCATTTCTAGGGC 449
||||||||||||||||||| | ||||||||||| | | ||||||||||||||||||||||
Sbjct 421 GTGAAGGTGCCTATAAACGAT-GGGTCGAGCCA-TACCTTGAGGACCTCATTTCTAGGGC 478
Query 450 AAGAGTAGCTTTGG-CCATTTTTATCTCTATTTCGCCGATAGACGACACCGAACTTAA 506
|||||||||||||| || |||||||||| ||||| |||| |||| ||||| |||||||
Sbjct 479 AAGAGTAGCTTTGGTCC-TTTTTATCTCCATTTCCCCGAGAGACAACACCAAACTTAA 535
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75652221315
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5