BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg914129
Length=2031
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50260.1 | Symbols: NTMC2TYPE5.1, NTMC2T5.1 | N-terminal-tra... 2843 0.0
AT3G19830.1 | Symbols: NTMC2TYPE5.2, NTMC2T5.2 | Calcium-depend... 1604 0.0
> AT1G50260.1 | Symbols: NTMC2TYPE5.1, NTMC2T5.1 | N-terminal-transmembrane-C2
domain type 5.1 | chr1:18617593-18621690 REVERSE
LENGTH=2334
Length=2334
Score = 2843 bits (1539), Expect = 0.0
Identities = 1887/2050 (92%), Gaps = 43/2050 (2%)
Strand=Plus/Plus
Query 1 ATGATTCCGCAATCTTCTTTTTC-AAGTTTTGATTTCCGGTTACCTGTTGATGTGTCTCG 59
|||||||| ||| |||||| ||| || |||||||||||| |||||||||||||||||| |
Sbjct 48 ATGATTCCACAAACTTCTTCTTCGAA-TTTTGATTTCCGATTACCTGTTGATGTGTCTTG 106
Query 60 TC-CTCTGCTCTGTCCATGCTCTTATGAGCTCCGCGCGGTTGTGTCTCCAAGGAGTCGGG 118
| |||||||||||||||||||| ||||||||||||||||| | | | ||||||||||||
Sbjct 107 -CACTCTGCTCTGTCCATGCTCTAATGAGCTCCGCGCGGTTTTTTTTACAAGGAGTCGGG 165
Query 119 TTCTTCGTCGGAACTTCAAAGTTTTGAACTTTCGG-TTAGTTTCCTGCGGAGTTCGTGGC 177
|||| |||| || | ||||| ||| ||||||| || ||| ||||||| ||| |||||||
Sbjct 166 TTCTGCGTCCGAGCGTCAAAATTTCGAACTTTAGGTTTA-TTTCCTGTGGATTTCGTGG- 223
Query 178 G-ATTCGAAAAACCTAAGATTGACGGATTCTAGTAGAAAGGCTGCAAATAGGTTTCTTTT 236
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 224 GAATTCGAAAAACCTAAGATTGACGGATTCTAGTAGAAAGGCTGCAAATAGGTTTGTAAT 283
Query 237 TTCTAGGTTTTCAAATGAATTCAAAGTCGAGGAAACTTCGCAAGAGTCTCTGATTCATGA 296
| |||||||| | |||||||| ||| ||||| | |||| ||||| || || |
Sbjct 284 TGCTAGGTTTACGAATGAATTTGAAGACGAGGGTAGTTCGAAAGAG--TC-----CA--A 334
Query 297 TGACCAAAACAATTAT-AGTAATTTTAGGGAAGATCCGATAGTGGATAAGCTTAGGACCC 355
||||||| ||||| | ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 335 TGACCAAGCCAATT-TCAGTAACTTTAGGGAAGATCCGATAGTGGATAAGCTTAGGACCC 393
Query 356 AATTGGGTGTAATCCATCCACTTCCGTCACC-ACCCCTAAATCGTACTGTGATTGGTCTA 414
| || |||||||||||||||||||||||||| | || | ||||||| ||| ||| |||||
Sbjct 394 AGTTAGGTGTAATCCATCCACTTCCGTCACCGA-CCATTAATCGTAGTGTAATTAGTCTA 452
Query 415 TTCGTCTTCTTCTTTTTCGTTGGTGTTGCTTTTGATAAGCTATGGACGT-G-G--AGA-- 468
||||||||||||||||||||||||||||||||||||||||||||||| | | | |||
Sbjct 453 TTCGTCTTCTTCTTTTTCGTTGGTGTTGCTTTTGATAAGCTATGGACTTGGAGAAAGAGG 512
Query 469 C------AAACGGGTGGAGATGGAGGGCAAAGAGGATTAGGGCCATGGCCACAGGTTCCC 522
| |||| |||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct 513 CAAAGAGAAACAGGTGGAGATGGAAACCAACGAGGAGTAGGGCCATGGCCACAGGTTCCC 572
Query 523 ACCAGCTTCTCTTTGTTCCTAGAGAAGGACTTGCAAAGGAAAGAGTCGGTGGAGTGGGTC 582
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 573 ACCAGCTTCTCTTTGTTCCTAGAGAAGGATTTGCAAAGGAAAGAGTCCGTGGAGTGGGTC 632
Query 583 AACATGGTGTTGGGGAAGCTCTGGAAAGTGTATAGAGCTGGG-ATTGAGAATTGGCTCGT 641
||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 633 AACATGGTGTTAGGGAAGCTCTGGAAAGTGTATAGAGC-GGGTATTGAGAATTGGCTCGT 691
Query 642 TGGTTTGTTGCAGCCAGTGATTGATGACTTGAAGAAGCCTGATTATGTGCAGAGAGTTGA 701
||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 692 TGGTTTGTTACAGCCTGTGATTGATGACTTGAAAAAGCCTGATTATGTGCAGAGAGTTGA 751
Query 702 AATTAAGCAGTTTTCTTTAGGGGATGAGCCTTTGTCTGTCAGAAATGTTGAGAGGAGGAC 761
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 752 GATTAAGCAGTTTTCTTTAGGGGATGAGCCGTTGTCTGTCAGAAATGTTGAGAGGAAGAC 811
Query 762 ATCTCGCCGTGCCAATGACTTGCAGTACCAAATTGGCCTTAGGTATACTGGTGGTGCCCG 821
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||
Sbjct 812 ATCTCGCCGTGCCAATGACTTGCAGTACCAAATTGGCCTTCGGTATACTGGCGGTGCACG 871
Query 822 CATGTTGTTAATGCTCTCTTTGAAATTCGGAATTATCCCAATCGTTGTTCCAGTTGGTGT 881
|||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 872 CATGTTGTTAATGCTCTCTTTGAAATTCGGTGTTATCCCAATAGTTGTTCCAGTTGGTGT 931
Query 882 CCGGGATTTCGACATTGATGGTGAGCTTTGGGTCAAACTAAGATTGATACCGACACAGCC 941
||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 932 CCGAGATTTTGACATTGATGGTGAGCTTTGGGTCAAACTAAGATTAATACCGACACAACC 991
Query 942 TTGGGTGGGAGCTGTATCATGTTCGTTTGTATCACTTCCAAAGGTCACATTTCAACTCGC 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 992 TTGGGTGGGAGCTGTATCATGTTCGTTTGTATCACTTCCAAAGGTCACATTTCAACTTGC 1051
Query 1002 AGCATTCATATTGTTTAACCTAATGGGAATTCCCGTTCTATCAATGTTCTTGACCAAACT 1061
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 AGCATTCAGATTGTTTAATCTAATGGGAATTCCCGTTCTATCAATGTTCTTGACCAAACT 1111
Query 1062 GCTGACGGAGGATTTGCCTCGATTATTTGTCCGACCAAAGAAAATTGTCTTGGATTTTCA 1121
|||||| | ||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1112 GCTGACTGTGGATTTGCCTCGATTATTTGTCCGACCGAAGAAAATTGTCTTGGACTTTCA 1171
Query 1122 AAAAGGAAAAGCTGTTGGCCCTGTTTCAGAAGACCTGAAATCAGGGGAAATGCAGGAAGG 1181
||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||
Sbjct 1172 GAAAGGAAAAGCTGTTGGACCTGTTTTAGAAGACCTGAAATCAGGAGAAATGCAGGAAGG 1231
Query 1182 CAATAATGATTTTGTCGGGGAACTATCTGTTACTCTTGTAGACGCTCAGAATCTTCGTTA 1241
|||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||
Sbjct 1232 CAATAAGGATTTTGTCGGGGAACTATCTGTTACTCTTGTTGACGCCCAGAAACTTCGATA 1291
Query 1242 CATGTTCTCTGGTAAAACGGATCCATATGCAATTCTCAGATTAGGGGATCAAGTTATCCG 1301
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292 CATGTTTTTTGGTAAAACGGATCCATATGCAATTCTCAGATTAGGGGATCAAGTTATCCG 1351
Query 1302 TGGTAAAAGGAACAGTCAAACTACTGTCATTGGGGCTCCTGGTCAGCCAATTTGGAATCA 1361
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1352 TAGTAAAAGGAACAGTCAAACTACTGTCATTGGGGCTCCTGGTCAGCCAATTTGGAATCA 1411
Query 1362 GGACTTTCAATTCCTTGTTTCAAATCCTAGAGAGCAAATACTACAAATTGAGGTCAATGA 1421
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1412 GGACTTTCAATTCCTTGTTTCAAATCCTAGAGAGCAAGTATTACAAATTGAGGTCAATGA 1471
Query 1422 TCGTCTTGGGTTTGCTGATATGGCTATTGGTACTGGAGAGGTTGATATCAGATTTCTGCA 1481
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1472 TCGTCTTGGGTTTGCTGATATGGCTATTGGTACTGGAGAGGTTGATCTCAGATTTCTGCA 1531
Query 1482 AGATACGGTTCCTACAGACAGAATTGTGGTTTTGCGTGGTGGTTGGAGTTTGTTTGGAAA 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1532 AGATACGGTTCCTACAGACAGAATTGTGGTTTTGCGTGGTGGTTGGAGTTTGTTTGGAAA 1591
Query 1542 GGGATCTGCGGGTGAGATACTGCTACGGCTTACATACAAAGCATATGTGGAGGAGGAAGA 1601
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1592 GGGATCTGCGGGTGAGATACTGCTACGGCTTACATACAAATCATATGTGGAGGAGGAAGA 1651
Query 1602 AGATGACAAGACCAATGTCAAAGCCATTGATGCAGATGCTTCTGATGATGAAATGTCTGA 1661
||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||
Sbjct 1652 AGATGACAAGACCAATGTCAAAGCCATTGAT--A----CTTCTGACGATGAAATGTCTGA 1705
Query 1662 TTCAGAAGGACTTGGCTCATTTGTGCGGAATGAAAAGGTTTCTTCAGATGATATTGGTCA 1721
|||||||| ||||||||||||||||||||| | |||| |||| ||||||||||||| |||
Sbjct 1706 TTCAGAAGAACTTGGCTCATTTGTGCGGAAGGGAAAGCTTTCGTCAGATGATATTGATCA 1765
Query 1722 AGAGTCATTTATGAACGTGTTGTCTGCTTTGATTGTGAGTGAGGAGTTTCAAGGCATAGT 1781
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1766 AGAGTCATTTATGAACGTGTTGTCTGCATTGATTGTGAGTGAGGAGTTTCAAGGCATAGT 1825
Query 1782 TTCATCTGAAGCCGGAGACAGTAAAATTTCTGGTGGTGACTCGCTTGGGGCTCCAGTACC 1841
|||||||||||| ||||| ||| |||| |||||||||||| |||||||| ||||||||
Sbjct 1826 TTCATCTGAAGCTAGAGACGGTATAATTGATGGTGGTGACTCACTTGGGGCACCAGTACC 1885
Query 1842 TTCTAAGGCAGATAGTAGTAATGGGTCTGAAAGCAACACAGATGTATCAGATTCGGATTT 1901
||||||| |||||| |||||| ||||||||||| ||| ||||||||||| ||| ||||||
Sbjct 1886 TTCTAAGCCAGATACTAGTAAGGGGTCTGAAAGAAACGCAGATGTATCAAATTTGGATTT 1945
Query 1902 GTTAGTTAAAAATTCTGGTAGAGG-GACTGGCGGTGATGGAGGGTTAGCATTACTGTGGT 1960
||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||
Sbjct 1946 GTTAGTTGCAAATTCTGGTAGAGGAG-CTGGCGGTGATGGAGGATTAGCATTACTGTGGT 2004
Query 1961 TCGGTATAATCACGGGTATATTGGTTCTTGTTGCTATCAACATGGAAGGCACACGTTTCT 2020
||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 2005 TCGGTATTATCACGGGTATATTGGTTCTTGTTGCTATCAACATGGAAGGCTCAAGTTTCT 2064
Query 2021 TCAACCCGTA 2030
||||||||||
Sbjct 2065 TCAACCCGTA 2074
> AT3G19830.1 | Symbols: NTMC2TYPE5.2, NTMC2T5.2 | Calcium-dependent
lipid-binding (CaLB domain) family protein | chr3:6885606-6890064
REVERSE LENGTH=2441
Length=2441
Score = 1604 bits (868), Expect = 0.0
Identities = 1351/1580 (86%), Gaps = 50/1580 (3%)
Strand=Plus/Plus
Query 272 CTTCGCAAGAGTCT-CTGATTCATGATGACCA-AAACAATTAT-AGTAATTTTAGGGAAG 328
|||| || |||||| | ||||| | ||| | |||||||| | | ||| ||||| ||||
Sbjct 389 CTTCACAGGAGTCTGC-AATTCAAGGTGA-TAGAAACAATT-TCACTAACTTTAGAGAAG 445
Query 329 ATCCGATAGTGGATAAGCTTAGGACCCAATTGGGTGTAATCCATCCACTTCCGTCACCAC 388
|||| |||||||||||||| ||||| || | ||||||||||| ||| | ||||| ||||
Sbjct 446 ATCCTATAGTGGATAAGCTCAGGACTCAGCTAGGTGTAATCCACCCAATCCCGTCTCCAC 505
Query 389 CCCTAAATCGTACTGTGATTGGTCTATTCGTC-TTCTTCTT-TTTCGTTGGTGTTGCTTT 446
| | | ||||| || ||||||||||||| | |||||||| ||| ||||||||| |||
Sbjct 506 CGATTAGTCGTAATGCAATTGGTCTATTCG-CATTCTTCTTCTTT-GTTGGTGTT-ATTT 562
Query 447 -TGATAAGCTATGGAC------------GTGGAGACAAACGGGTGGAGATGGAGGGCAAA 493
||||||||||||||| | ||||||||| || ||| |||||||| ||||
Sbjct 563 GTGATAAGCTATGGACTTGGAGAAAGAGGCGGAGACAAATGGCTGGTGATGGAGGCCAAA 622
Query 494 GAGGATTAGGGCCATGGCCACAGGTTCCCACCAGCTTCTCTTTGTTCCTAGAGAAGGACT 553
||||| ||||||||| |||||||||||||||| ||||| ||| ||| |||||||| |
Sbjct 623 GAGGAGCCGGGCCATGGGCACAGGTTCCCACCAGTTTCTCGCTGTCCCTTGAGAAGGATT 682
Query 554 TGCAAAGGAAAGAGTCGGTGGAGTGGGTCAACATGGTGTTGGGGAAGCTCTGGAAAGTGT 613
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
Sbjct 683 TGCAAAGGAAAGAGTCGGTGGAGTGGGTGAACATGGTGTTGGTTAAGCTCTGGAAAGTTT 742
Query 614 ATAGAGCTGGGATTGAGAATTGGCTCGTTGGTTTGTTGCAGCCAGTGATTGATGACTTGA 673
|||||| |||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||
Sbjct 743 ATAGAGGTGGGATTGAGAATTGGCTTGTTGGATTGTTGCAGCCTGTGATTGATGATTTGA 802
Query 674 AGAAGCCTGATTATGTGCAGAGAGTTGAAATTAAGCAGTTTTCT-TTAGGGGATGAGCCT 732
||||||||||||||||||||||||||||||||||||| || ||| || ||||||||||||
Sbjct 803 AGAAGCCTGATTATGTGCAGAGAGTTGAAATTAAGCAATTCTCTCTT-GGGGATGAGCCT 861
Query 733 TTGTCTGTCAGAAATGTTGAGAGGAGGACATCTCGCCGTGCCAATGACTTGCAGTACCAA 792
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 862 TTGTCTGTTAGAAATGTTGAGAGGAGGACATCTCGCCGTGTTAATGACTTGCAGTACCAG 921
Query 793 ATTGGCCTTAGGTATACTGGTGGTGCCCGCATGTTGTTAATGCTCTCTTTGAAATTCGGA 852
||||| ||| |||||||||||||||| || |||||||||||||||||||| ||||| ||
Sbjct 922 ATTGGTCTTCGGTATACTGGTGGTGCTCGGATGTTGTTAATGCTCTCTTTAAAATTTGGT 981
Query 853 ATTATCCCAATCGTTGTTCCAGTTGGTGTCCGGGATTTCGACATTGATGGTGAGCTTTGG 912
|| |||||| | ||||| ||||||||| | |||||||| |||||||| ||||| || |||
Sbjct 982 ATCATCCCAGTAGTTGTGCCAGTTGGTATTCGGGATTTTGACATTGACGGTGAACTATGG 1041
Query 913 GTCAAACTAAGATTGATACCGACA-CAGCCTTGGGTGGGAGCTGTATCATGTTCGTTTGT 971
|| ||| |||||||||| ||| || | ||||||||| ||||| | |||||| |||||||
Sbjct 1042 GTTAAATTAAGATTGATTCCGTCAGC-GCCTTGGGTTGGAGCAGCATCATGGGCGTTTGT 1100
Query 972 ATCACTTCCAAAGGTCACATTTCAACTCGCAGCATTCATATTGTTTAACCTAATGGGAAT 1031
|||||||||||| ||| |||| | || ||| ||||| ||||||||| |||||||||||
Sbjct 1101 TTCACTTCCAAAGATCAAATTTGAGCTTGCACCATTCCGATTGTTTAATCTAATGGGAAT 1160
Query 1032 TCCCGTTCTATCAATGTTCTTGACCAAACTGCTGACGGAGGATTTGCCTCGATTATTTGT 1091
||| ||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct 1161 TCCTGTTTTATCAATGTTCTTGACCAAACTACTGACAGAAGATTTGCCTCGATTATTTGT 1220
Query 1092 CCGACCAAAGAAAATTGTCTTGGATTTTCAAAAAGGAAAAGCTGTTGGCCCTGTTTCAGA 1151
|| ||||||||||||||||||||||| || || |||||||||||||| |||||||||||
Sbjct 1221 ACGCCCAAAGAAAATTGTCTTGGATTTCCAGAAGGGAAAAGCTGTTGGGCCTGTTTCAGA 1280
Query 1152 AGACCTGAAATCAGGGGAAATGCAGGAAGGCAATAATGATTTTGTCGGGGAACTATCTGT 1211
|||| | ||||| || |||||||||||||| || || |||||||| |||||||| |||||
Sbjct 1281 AGACTTAAAATCTGGAGAAATGCAGGAAGGGAACAAGGATTTTGTAGGGGAACTGTCTGT 1340
Query 1212 TACTCTTGTAGACGCTCAGAATCTTCGTTACATGTTCTCTGGTAAAACGGATCCATATGC 1271
|||||||||| | || ||||| |||| |||||||||||||||| ||||||||||||||
Sbjct 1341 TACTCTTGTAAATGCCCAGAAACTTCCATACATGTTCTCTGGTAGAACGGATCCATATGT 1400
Query 1272 AATTCTCA-GATTAGGGGATCAAGTTATCCGTGGTAA-AAGGAACAGTCAAACTACTGTC 1329
||| | | || |||| |||||||||||||| |||| || ||||||||||||||||||
Sbjct 1401 TATT-TTACGAATAGGTGATCAAGTTATCCGCAGTAAGAA-GAACAGTCAAACTACTGTG 1458
Query 1330 ATTGGGGCTCCTGGTCAGCCAATTTGGAATCAGGACTTTCAATTCCTTGTTTCAAATCCT 1389
||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct 1459 ATTGGGGCTCCTGGTCAGCCAATCTGGAACCAGGACTTCCAATTCCTTGTGTCAAATCCT 1518
Query 1390 AGAGAGCAAATACTACAAATTGAGGTCAATGATC-GTCTTGGGTTTGCTGATATGGCTAT 1448
||||||||| || |||||||||| ||||| || | ||||||| ||||| |||||||||||
Sbjct 1519 AGAGAGCAAGTATTACAAATTGAAGTCAACGA-CTGTCTTGGATTTGCCGATATGGCTAT 1577
Query 1449 TGGTACT-GGAGAGGTTGA--TATCAGATTTCTGCAAGATACGGTTCCTACAGACAGAAT 1505
||||| | ||||||||||| | | | || |||| |||||||||||||||||||||| |
Sbjct 1578 TGGTA-TCGGAGAGGTTGACCT-TGA-ATCACTGCCAGATACGGTTCCTACAGACAGATT 1634
Query 1506 TG-TGGTTTTGCGTGGTGGTTGGAGTTTGTTTGGAAAGGGATCTGCGGGTGAGATACTGC 1564
|| | | ||| || || |||||||||||||| |||||||||||| | || || ||||| |
Sbjct 1635 TGTTAG-TTTACGAGGCGGTTGGAGTTTGTTCGGAAAGGGATCTACTGGAGAAATACTAC 1693
Query 1565 TACGGCTTACATACAAAGCATATGTGGAGGAGGAAGAAGATGACAAGAC-CAATGTC-AA 1622
| |||||||||||||||||||| |||||||| ||||||||||| || || ||| | | ||
Sbjct 1694 TCCGGCTTACATACAAAGCATACGTGGAGGATGAAGAAGATGATAA-ACGCAACG-CAAA 1751
Query 1623 AGCCAT-TGATGCAGATGCTTCTGATGATGAAATGTCTGATTCAGAAGGACTTGGCTCAT 1681
|||||| | ||||||||||||| |||||||||||||||||||| |||| || | ||||||
Sbjct 1752 AGCCATAT-ATGCAGATGCTTCCGATGATGAAATGTCTGATTCGGAAGAACCTAGCTCAT 1810
Query 1682 TTGTGCGGAATGAAAAGGTTTCTTCAGATGATATTGGTCAAGAGTCATTTATGAACGTGT 1741
|||||| |||||| ||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1811 TTGTGCAGAATGACAAGATTCCTTCAGATGATATTGGTCAAGAGTCATTTATGAACGTGT 1870
Query 1742 TGTCTGCTTTGATTGTGAGTGAGGAGTTTCAAGGCATAGTTTCATCTGAAGCCGGAGA-C 1800
||||||| |||||| |||| ||||| |||||||||||||||||||| ||| | || || |
Sbjct 1871 TGTCTGCATTGATTTTGAGCGAGGAATTTCAAGGCATAGTTTCATCAGAAACTGG-GAAC 1929
Query 1801 AGTAAAATTTCTGGTGGTGA 1820
| |||| || || ||||||
Sbjct 1930 AATAAAGTTGATGATGGTGA 1949
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100652092725
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5