BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg914147

Length=162
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G50380.1 | Symbols:  | Prolyl oligopeptidase family protein ...   163    4e-40


> AT1G50380.1 | Symbols:  | Prolyl oligopeptidase family protein 
| chr1:18662309-18666478 FORWARD LENGTH=2597
Length=2597

 Score =  163 bits (88),  Expect = 4e-40
 Identities = 119/132 (90%), Gaps = 9/132 (7%)
 Strand=Plus/Plus

Query  22   CACTCACTTTCTCGCGACTCGTACGCGTGGTCGTCTTCTCCACTTCGATACTCCTCTCTC  81
            |||||||||||||||||||||||      |||||||||||||||||||||||||||||||
Sbjct  6    CACTCACTTTCTCGCGACTCGTA------GTCGTCTTCTCCACTTCGATACTCCTCTCTC  59

Query  82   TTGCCTCGttcctcttcttcctcgccgccgctctattctacggttgtcgtcttcttctct  141
            |||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| | |
Sbjct  60   TTGCCTCGTTCCTCTTGTTCCTCGCCGCCGCTCTATTCTACGGCTGTCTTCTTCTT-T-T  117

Query  142  ttcttcttcctc  153
            | || |||||||
Sbjct  118  TCCT-CTTCCTC  128



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 6991887789


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5