BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg914165 Length=567 Score E Sequences producing significant alignments: (Bits) Value AT1G50520.1 | Symbols: CYP705A27 | cytochrome P450, family 705,... 394 5e-109 AT1G50550.1 | Symbols: CYP705A26P | a cytochrome P450 pseudogen... 383 1e-105 AT1G50560.1 | Symbols: CYP705A25 | cytochrome P450, family 705,... 355 2e-97 > AT1G50520.1 | Symbols: CYP705A27 | cytochrome P450, family 705, subfamily A, polypeptide 27 | chr1:18719378-18721219 FORWARD LENGTH=1754 Length=1754 Score = 394 bits (213), Expect = 5e-109 Identities = 250/268 (93%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 1 ATGGCAGCAATCACCGTTGACTTTCAGATCTGCTTCATTTTCATCCTCCTATGG-CCCTT 59 ||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||| Sbjct 4 ATGGCAGCAATCACCGTTGACTTTCAGCTCTGCTTCATCTTCATCCTCCTA-GGAATCTT 62 Query 60 CTCACTCTTCTGTCTATATGGTTTCTTCTTCAAGAAACCAAAAGAGCCACGACTTCAAGG 119 ||||||||||||||| | || |||||||||||||||||||||||| |||| ||||||||| Sbjct 63 CTCACTCTTCTGTCTCTCTGCTTTCTTCTTCAAGAAACCAAAAGACCCACAACTTCAAGG 122 Query 120 CTGTGGTCTACCTCCGAGCCCACCATCTCTACCAGTCATAGGTCATCTTCACCTTCTCCT 179 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 123 CTGTGGTCTACCTCCGAGCCCACCCTCTCTACCGGTCATAGGTCATCTTCACCTTCTCCT 182 Query 180 TTCTGTTCCATGTCACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTCA 239 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 CTCTGTTCCATGTCTCAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTCA 242 Query 240 CCTTCGCGCTTTCAATATCTCAATAGTT 267 |||||| || ||||||||| |||||||| Sbjct 243 CCTTCGTGCATTCAATATCCCAATAGTT 270 > AT1G50550.1 | Symbols: CYP705A26P | a cytochrome P450 pseudogene | chr1:18721898-18722866 FORWARD LENGTH=969 Length=969 Score = 383 bits (207), Expect = 1e-105 Identities = 250/271 (92%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 1 ATGGCAGCAATCACCGTTGACTTTCAGATCTGCTTCATTTTCATCCTCCTATGG-CCCTT 59 ||||||||||||||| || |||||||| |||||||||| |||||||||||| || ||| Sbjct 1 ATGGCAGCAATCACCATTTACTTTCAGCTCTGCTTCATCTTCATCCTCCTA-GGTATCTT 59 Query 60 CTCACTCTTCTGTCTATATGGTTTCTTCTTCAAGAAACCAAAAGAGCCACGACTTCAAGG 119 ||||||||||||||| | || ||| ||||||||||||||||||||||||| ||| |||| Sbjct 60 CTCACTCTTCTGTCTCTCTGCTTTTTTCTTCAAGAAACCAAAAGAGCCACTACTCCAAGA 119 Query 120 CTGTGGTCTACCTCCGAGCCCACCATCTCTACCAGTCATAGGTCATCTTCACCTTCTCCT 179 |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct 120 CTGTGGTCTACCACCGAGCCCACCATCTATACCGGTCATAGGTCATCTTCACCTTCTCCT 179 Query 180 TTCTGTTCCATGTCACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTCA 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 CTCTGTTCCATGTCACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTCA 239 Query 240 CCTTCGCGCTTTCAATATCTCAATAGTTCTA 270 ||| ||||||||||||||| ||||||||||| Sbjct 240 CCTCCGCGCTTTCAATATCCCAATAGTTCTA 270 > AT1G50560.1 | Symbols: CYP705A25 | cytochrome P450, family 705, subfamily A, polypeptide 25 | chr1:18724207-18726272 FORWARD LENGTH=1984 Length=1984 Score = 355 bits (192), Expect = 2e-97 Identities = 247/273 (90%), Gaps = 6/273 (2%) Strand=Plus/Plus Query 1 ATGGCAGCAATCACCGTTGACTTTCAGATCTGCTTCATTTTCATCCTCCTATGGC--CCT 58 ||||||||||||| ||||||||||||| |||||||||| |||||||||||| || || Sbjct 69 ATGGCAGCAATCAGCGTTGACTTTCAGCTCTGCTTCATCTTCATCCTCCTA--GCAATCT 126 Query 59 TCTCACTCTTCTGTCTATATGGTTTCTTCTTCAAGAAACCAAAAGAGCCACGACTTCAAG 118 |||||||||||||| | | || |||||||||||||||||||||||| |||| |||||||| Sbjct 127 TCTCACTCTTCTGTTTCTCTGCTTTCTTCTTCAAGAAACCAAAAGACCCACAACTTCAAG 186 Query 119 GCTGTGGTCTACCTCCGAGCCCACCATCTCTACCAG-TCATAGGTCATCTTCACCTTCTC 177 |||| |||||||||||||||||||| |||||||| | |||| |||||||||||| ||||| Sbjct 187 GCTGCGGTCTACCTCCGAGCCCACCGTCTCTACC-GATCATTGGTCATCTTCACTTTCTC 245 Query 178 CTTTCTGTTCCATGTCACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTT 237 || |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 246 CTCTCTGTTCCATGTTACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCTTCCTT 305 Query 238 CACCTTCGCGCTTTCAATATCTCAATAGTTCTA 270 ||||| ||||||||||||||| | ||||||||| Sbjct 306 CACCTCCGCGCTTTCAATATCCCTATAGTTCTA 338 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27226907674 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5