BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg914165

Length=567
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G50520.1 | Symbols: CYP705A27 | cytochrome P450, family 705,...   394    5e-109
  AT1G50550.1 | Symbols: CYP705A26P | a cytochrome P450 pseudogen...   383    1e-105
  AT1G50560.1 | Symbols: CYP705A25 | cytochrome P450, family 705,...   355    2e-97 


> AT1G50520.1 | Symbols: CYP705A27 | cytochrome P450, family 705, 
subfamily A, polypeptide 27 | chr1:18719378-18721219 FORWARD 
LENGTH=1754
Length=1754

 Score =  394 bits (213),  Expect = 5e-109
 Identities = 250/268 (93%), Gaps = 2/268 (1%)
 Strand=Plus/Plus

Query  1    ATGGCAGCAATCACCGTTGACTTTCAGATCTGCTTCATTTTCATCCTCCTATGG-CCCTT  59
            ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||   |||
Sbjct  4    ATGGCAGCAATCACCGTTGACTTTCAGCTCTGCTTCATCTTCATCCTCCTA-GGAATCTT  62

Query  60   CTCACTCTTCTGTCTATATGGTTTCTTCTTCAAGAAACCAAAAGAGCCACGACTTCAAGG  119
            ||||||||||||||| | || |||||||||||||||||||||||| |||| |||||||||
Sbjct  63   CTCACTCTTCTGTCTCTCTGCTTTCTTCTTCAAGAAACCAAAAGACCCACAACTTCAAGG  122

Query  120  CTGTGGTCTACCTCCGAGCCCACCATCTCTACCAGTCATAGGTCATCTTCACCTTCTCCT  179
            |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct  123  CTGTGGTCTACCTCCGAGCCCACCCTCTCTACCGGTCATAGGTCATCTTCACCTTCTCCT  182

Query  180  TTCTGTTCCATGTCACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTCA  239
             ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  183  CTCTGTTCCATGTCTCAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTCA  242

Query  240  CCTTCGCGCTTTCAATATCTCAATAGTT  267
            |||||| || ||||||||| ||||||||
Sbjct  243  CCTTCGTGCATTCAATATCCCAATAGTT  270


> AT1G50550.1 | Symbols: CYP705A26P | a cytochrome P450 pseudogene 
| chr1:18721898-18722866 FORWARD LENGTH=969
Length=969

 Score =  383 bits (207),  Expect = 1e-105
 Identities = 250/271 (92%), Gaps = 2/271 (1%)
 Strand=Plus/Plus

Query  1    ATGGCAGCAATCACCGTTGACTTTCAGATCTGCTTCATTTTCATCCTCCTATGG-CCCTT  59
            ||||||||||||||| || |||||||| |||||||||| |||||||||||| ||   |||
Sbjct  1    ATGGCAGCAATCACCATTTACTTTCAGCTCTGCTTCATCTTCATCCTCCTA-GGTATCTT  59

Query  60   CTCACTCTTCTGTCTATATGGTTTCTTCTTCAAGAAACCAAAAGAGCCACGACTTCAAGG  119
            ||||||||||||||| | || ||| ||||||||||||||||||||||||| ||| |||| 
Sbjct  60   CTCACTCTTCTGTCTCTCTGCTTTTTTCTTCAAGAAACCAAAAGAGCCACTACTCCAAGA  119

Query  120  CTGTGGTCTACCTCCGAGCCCACCATCTCTACCAGTCATAGGTCATCTTCACCTTCTCCT  179
            |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct  120  CTGTGGTCTACCACCGAGCCCACCATCTATACCGGTCATAGGTCATCTTCACCTTCTCCT  179

Query  180  TTCTGTTCCATGTCACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTCA  239
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  180  CTCTGTTCCATGTCACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTTCA  239

Query  240  CCTTCGCGCTTTCAATATCTCAATAGTTCTA  270
            ||| ||||||||||||||| |||||||||||
Sbjct  240  CCTCCGCGCTTTCAATATCCCAATAGTTCTA  270


> AT1G50560.1 | Symbols: CYP705A25 | cytochrome P450, family 705, 
subfamily A, polypeptide 25 | chr1:18724207-18726272 FORWARD 
LENGTH=1984
Length=1984

 Score =  355 bits (192),  Expect = 2e-97
 Identities = 247/273 (90%), Gaps = 6/273 (2%)
 Strand=Plus/Plus

Query  1    ATGGCAGCAATCACCGTTGACTTTCAGATCTGCTTCATTTTCATCCTCCTATGGC--CCT  58
            ||||||||||||| ||||||||||||| |||||||||| ||||||||||||  ||   ||
Sbjct  69   ATGGCAGCAATCAGCGTTGACTTTCAGCTCTGCTTCATCTTCATCCTCCTA--GCAATCT  126

Query  59   TCTCACTCTTCTGTCTATATGGTTTCTTCTTCAAGAAACCAAAAGAGCCACGACTTCAAG  118
            |||||||||||||| | | || |||||||||||||||||||||||| |||| ||||||||
Sbjct  127  TCTCACTCTTCTGTTTCTCTGCTTTCTTCTTCAAGAAACCAAAAGACCCACAACTTCAAG  186

Query  119  GCTGTGGTCTACCTCCGAGCCCACCATCTCTACCAG-TCATAGGTCATCTTCACCTTCTC  177
            |||| |||||||||||||||||||| |||||||| | |||| |||||||||||| |||||
Sbjct  187  GCTGCGGTCTACCTCCGAGCCCACCGTCTCTACC-GATCATTGGTCATCTTCACTTTCTC  245

Query  178  CTTTCTGTTCCATGTCACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCCTCCTT  237
            || |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct  246  CTCTCTGTTCCATGTTACAAATCCTTTCAGAAACTCTCCTCCAAGTATGGTCCCTTCCTT  305

Query  238  CACCTTCGCGCTTTCAATATCTCAATAGTTCTA  270
            ||||| ||||||||||||||| | |||||||||
Sbjct  306  CACCTCCGCGCTTTCAATATCCCTATAGTTCTA  338



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 27226907674


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5