BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg914183 Length=504 Score E Sequences producing significant alignments: (Bits) Value AT1G50690.1 | Symbols: | Cystatin/monellin superfamily protein... 556 5e-158 > AT1G50690.1 | Symbols: | Cystatin/monellin superfamily protein | chr1:18779606-18780604 FORWARD LENGTH=877 Length=877 Score = 556 bits (301), Expect = 5e-158 Identities = 447/515 (87%), Gaps = 20/515 (4%) Strand=Plus/Plus Query 1 ATGGATCCGCAGGTGGTGGTCGATAAGAAATCTGAGGAGCCTGATCTGAAGCGTCAGAAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 163 ATGGATCCGCAGGTGGTGGTCGATAAGAAATCTGAGGAGCCTGATCTGAAGCGTCAGAAG 222 Query 61 CTGGACGAGGTCGATGAGAA--AT-GCGAAGAGATGTCGTCGTACAGCGATTCTACGTGT 117 ||||| |||| || ||| | || ||||||||||||| ||||||||||| || |||||| Sbjct 223 CTGGAGGAGGAGGAGGAGGAGGATTGCGAAGAGATGTCTTCGTACAGCGAGTCGACGTGT 282 Query 118 AGTTTCGATTCGGAAGATGAACGATTGGTCAAAGAAGAACT-C-AACAGAAGCGGGGATT 175 |||||||||||||||||||||||||||||| |||||||| | | || ||||||||| ||| Sbjct 283 AGTTTCGATTCGGAAGATGAACGATTGGTCGAAGAAGAA-TACCAA-AGAAGCGGGTATT 340 Query 176 ACGACTTTGACACCACGAAGCAAAGACGCTTTGTAATGCGCTATCCTGTTAACTTCGAGG 235 ||||||||||||||||||| ||||||||| |||| | |||||||||||| |||||||| Sbjct 341 ACGACTTTGACACCACGAAACAAAGACGCCTTGTGTTTTGCTATCCTGTTATCTTCGAGG 400 Query 236 ATAGCGATGTTGTTGATGAACCGGACACCGACGGAGATTTGGTCCACCGATTATCCAAGA 295 |||| || |||| | || |||| || ||||||||||||||||| || |||||||||||| Sbjct 401 ATAGTGACGTTGCTCATAAACCCGAAACCGACGGAGATTTGGTTCATAGATTATCCAAGA 460 Query 296 TTGCTCTTCAGAAACACAATGA-GTATAA-CTTGACAAATCTTGAA-TTAGTGAGAGCTG 352 |||||||||||||| ||||||| | |||| || || |||||||||| || |||||||||| Sbjct 461 TTGCTCTTCAGAAATACAATGATG-ATAAGCTGGA-AAATCTTGAACTT-GTGAGAGCTG 517 Query 353 TCAAGGCTAATCGCCATTATGGCGCGGGATTCATTTTCTACATCACCTTCGAGGCCAAGG 412 ||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||| Sbjct 518 TCAAGGCTAATCGGAAATATGGAGCCGGATTCATTTTCTACATCACCTTCGAGGCCAAGG 577 Query 413 ATAATGATTCTCACATT-ATT--AT-ACCTTTTCAAGCTACCGTTCGCTACCTTCCACTG 468 || | ||||||||| | | || || |||||||||| ||||||||||||||| | | Sbjct 578 ATGCTAATTCTCACACTGACCCCATTAC-TTTTCAAGCTGCCGTTCGCTACCTTCGAGGG 636 Query 469 CAG-GTAACCGTCTACCGTGTCAACCCTAAACCAT 502 | | ||| |||||||||||| |||||||||||| Sbjct 637 -ATTGAAACGGTCTACCGTGTCCACCCTAAACCAT 670 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24062156413 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5