BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg914199
Length=1605
Score E
Sequences producing significant alignments: (Bits) Value
AT4G03930.1 | Symbols: | Plant invertase/pectin methylesterase... 1007 0.0
AT1G11590.1 | Symbols: | Plant invertase/pectin methylesterase... 957 0.0
AT3G27980.1 | Symbols: | Plant invertase/pectin methylesterase... 665 0.0
AT1G36700.1 | Symbols: | pseudogene, hypothetical protein | ch... 556 2e-157
AT1G44980.1 | Symbols: PME7, ATPME7 | pectin methylesterase 7 |... 414 1e-114
> AT4G03930.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:1870422-1872387 FORWARD LENGTH=1575
Length=1575
Score = 1007 bits (545), Expect = 0.0
Identities = 748/843 (89%), Gaps = 25/843 (3%)
Strand=Plus/Plus
Query 10 GTTTGCAAAGGATA---TGACGACAAACAGTCATGTCAAAATC-TTTTGTTGGAGCTCAA 65
||| |||||| ||| ||| |||||||| ||||||||||| | ||||||||||||| ||
Sbjct 58 GTTAGCAAAGAATATTGTGATGACAAACACTCATGTCAAAA-CTTTTTGTTGGAGCTTAA 116
Query 66 GA-GGGTATCCTCGTCACTCTCGGAGATGAGATGTTGTGACTTATTGATCATCATTTTGA 124
|| | | |||||||||||||||||||| ||| || ||||||||||||||||| ||||||
Sbjct 117 GACAGCT-TCCTCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGA 175
Query 125 AGAATTCCGTGTGGAGGATCGACATGGCTATGATTGGTGTGATGGAAGACACAAAACTAC 184
||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 176 AGAATTCCGTGCGGAAGATCGACATGGCTATGATTGGTGTGATGGAAGATACAAAACAAC 235
Query 185 TTGAGGAAATGGAGAATGATATGCT-TGGTGTGAAGGAGGACACAAATCTATTTGAAGAG 243
|||||| ||||||||||||| ||| | || ||||||||||||||||||||||||| |||
Sbjct 236 ATGAGGAGATGGAGAATGATAAGCTAT-GTTTGAAGGAGGACACAAATCTATTTGAGGAG 294
Query 244 ATGATGGAGTCAGCAAAAGATAGGATGATCCGTTCAGTGGAAGAACTCTTAGGAGGAGAA 303
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 295 ATGATGGAGTCGGCAAAAGATAGGATGATCCGTTCAGTGGAGGAACTCTTAGGAGGAGAA 354
Query 304 -AGCCTTAATCTTGGATCTTACGAAAACATCCACACTTGGCTTAGTGGCGTTCTTACTAG 362
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 355 TTCCCTT-ATCTTGGATCTTACGAAAACATCCACACTTGGCTCAGTGGCGTTCTTACTAG 413
Query 363 CTACATCACATGTATCGACGGAATTGGTGAAGGTGCCTATAAACGTCGGGTCGAGCCAGA 422
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |
Sbjct 414 CTACATCACATGTATCGACGAAATTGGTGACGGTGCCTATAAACGTCGGGTCGAGCCACA 473
Query 423 GCTTGAAGACCTTTA-TTCTAAGGC-AAGAGTAGCTTTGGCAATTTTTATCTCCACTTCT 480
|||| |||||| | | ||||||||| ||| ||||||||||| |||||||||||| |||
Sbjct 474 GCTTCAAGACC-TCATTTCTAAGGCAAAG-GTAGCTTTGGCTCTTTTTATCTCCATTTCG 531
Query 481 CCGAGAGACGACACCGAACTTAAGTCGGTGGTTCCCAATGGCCCGTCTTGGTTATC-CAA 539
||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| | |
Sbjct 532 CCGAGAGACAACACCGAACTTAACTCGGTGGTTCCCAATAGCCCGTCTTGGTTATCTC-A 590
Query 540 CGTTGACAAGAAATATCTATATCTTAATCCTGAGGTTCTAAAGAAGATTGCCGATTTTGT 599
|||||||||||| |||||||||| ||| |||||| |||||| |||||||||||| ||||
Sbjct 591 TGTTGACAAGAAAGATCTATATCTCAATGCTGAGGCTCTAAAAAAGATTGCCGATGTTGT 650
Query 600 GGTCGCAAAAGATGGGAGCGGAAATTACAACACAGTGAATGCGGCCATTGCAGCGGCACC 659
|||||| |||||||||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct 651 GGTCGCGAAAGATGGGACCGGAAAGTACAACACAGTGAATGCGGCCATTGCAGCAGCACC 710
Query 660 TGAACAC-GGTAGAAAGAGATTCGTCATTTATATAAAGACAGGCGTCTATGATGAAATCG 718
| ||||| | | ||||||||| |||| ||||||||||||||| | |||||||||||||
Sbjct 711 TCAACACAGCCA-CAAGAGATTCATCATCTATATAAAGACAGGCATTTATGATGAAATCG 769
Query 719 TCCG-CATTGGGAGTATGAAAACCAATTTAACTCTCATCGGTGATGGTCAAGATTCAACC 777
| || ||||| || || |||| ||||||||||||| || |||||||||||||||||||||
Sbjct 770 T-CGCCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCAAGATTCAACC 828
Query 778 ATCATCACGGGCAATTTAAGCTG-TAACGATGGTA-AATCAACGTTCCAAACCGCAACTG 835
||||||||||||||||||||| | || | ||| || || ||||||| | || ||||||
Sbjct 829 ATCATCACGGGCAATTTAAGC-GCTAGCAATGTTAGAAG-AACGTTCTACACTGCAACTT 886
Query 836 TTG 838
|||
Sbjct 887 TTG 889
Score = 627 bits (339), Expect = 1e-178
Identities = 565/673 (84%), Gaps = 20/673 (3%)
Strand=Plus/Plus
Query 913 GCTTCTAATGGTGATGGCTTCATCGGAATAGACATGTGCTTCCGGAACACGGCCGGACCG 972
|||||||||||| | || ||||||||| |||||||||||||||| ||||||| ||| |||
Sbjct 889 GCTTCTAATGGTAAAGGATTCATCGGAGTAGACATGTGCTTCCGAAACACGGTCGGGCCG 948
Query 973 GCAAAGGGACAAGCTGTTGCCCTCCGTGTGAGTGGTGATATATCCGTTATTTACCGATGC 1032
||||| |||| |||||||||||||||||||||||||||||| ||||| |||||| ||||
Sbjct 949 GCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTCATTTACAGATGT 1008
Query 1033 CGTATCGAGGGGTATCAGGATACGTTGTATCCTCACAGACACCGCCAATTTTATAGGGAG 1092
||| ||||||| ||||||||| | ||||||||||||| | ||||||| ||||||||||||
Sbjct 1009 CGTGTCGAGGGATATCAGGATGCCTTGTATCCTCACATAGACCGCCAGTTTTATAGGGAG 1068
Query 1093 TTCTTTATTACCGGCACTGTAGATTTTATCTGTGGAAACGCCGCGGCCGTCTTCCAATTC 1152
| |||||||||||| ||||||||||| || ||||||||||| ||||| || || ||||||
Sbjct 1069 TGCTTTATTACCGGTACTGTAGATTTCATTTGTGGAAACGCAGCGGCGGTATTTCAATTC 1128
Query 1153 TGCCAAATTGTAGCAAGACAACCGAGGAAGGGGCAGAGCAATGTGATAACCGCTCAGTCA 1212
||||| |||||||||||||| || | | |||||| |||||| | ||||||||||| |||
Sbjct 1129 TGCCAGATTGTAGCAAGACAGCCTAATATGGGGCAAAGCAATTTCATAACCGCTCAATCA 1188
Query 1213 CGCGAAAGTGAGGACGACAACTCGGGCTTCTCCATTCAAAAATGCAATATCACTA-CAAG 1271
||||| | | |||||||||| ||||||||||| |||||||| ||||| ||||| | ||||
Sbjct 1189 CGCGAGACTAAGGACGACAAATCGGGCTTCTCAATTCAAAACTGCAACATCAC-AGCAAG 1247
Query 1272 TCCTGATCTAGATCTGGTTAAAGCAACTGTGAAGACGTTTTTTGGTCGTCCATGGAAGA- 1330
| | ||||||||| | |||||| || || |||| | |||| | || |||| ||
Sbjct 1248 TTCGGATCTAGAT------ACAGCAACCGTAAAAACGTATCTTGGAAGGCCTTGGAGGAT 1301
Query 1331 AGTATTCAACAGTTGTGATTCTACAATCTTTTATCGGTGATTTAGTTGATCCCGCAGGCT 1390
| | ||||||||| | | |||| || ||||| ||||||||||||||||||||||||||||
Sbjct 1302 ATT-TTCAACAGTCGCGGTTCTGCAGTCTTTCATCGGTGATTTAGTTGATCCCGCAGGCT 1360
Query 1391 GGACTCCTTGGGAAGGA-ACAACTGGTCTATCAACTCTCTACTACGGCGAATATCAAAAC 1449
||||||||||||||||| | ||||||||| ||||||||| ||||| |||||||||||||
Sbjct 1361 GGACTCCTTGGGAAGGAGA-AACTGGTCTGTCAACTCTCCACTACCGCGAATATCAAAAT 1419
Query 1450 ATGGGTCCAGGAGCTGTGACTAGCAAAAGGGTAAAGTGGAGAGGG-TTTAGAGTTCTTAC 1508
| |||||| |||||||||||||||| |||||| |||||| ||| |||| |||| | |
Sbjct 1420 AGGGGTCCGGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTC-GGGCTTTAAAGTTATGAA 1478
Query 1509 GGATCCTAA-CGAGGCCGCAAAATTAACTGTTAGC-AAGCTATTAGATGGA-AAATCGTG 1565
|||||||| | |||| || |||| ||||| ||| ||||| ||||||||| ||| | ||
Sbjct 1479 AGATCCTAAAC-AGGCTACAGAATTCACTGT-AGCCAAGCTCTTAGATGGAGAAA-CTTG 1535
Query 1566 GCTGAAAGCAAGT 1578
||| |||| ||||
Sbjct 1536 GCTAAAAGAAAGT 1548
> AT1G11590.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr1:3892580-3894677 FORWARD LENGTH=1686
Length=1686
Score = 957 bits (518), Expect = 0.0
Identities = 739/843 (88%), Gaps = 25/843 (3%)
Strand=Plus/Plus
Query 10 GTTTGCAAAGGATA---TGACGACAAACAGTCATGTCAAAATC-TTTTGTTGGAGCTCAA 65
||| |||||| ||| ||| |||||||||||||||||||| | ||||||||||||| ||
Sbjct 112 GTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAA-CTTTTTGTTGGAGCTTAA 170
Query 66 -GAGGGTATCCTCGTCACTCTCGGAGATGAGATGTTGTGACTTATTGATCATCATTTTGA 124
| |||| || ||||||||||||||||| ||| || ||||||||||||||||| ||||||
Sbjct 171 GGCGGGT-TCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGA 229
Query 125 AGAATTCCGTGTGGAGGATCGACATGGCTATGATTGGTGTGATGGAAGACACAAAACTAC 184
|||||||||| ||||||||||||||| |||||||||||||||||| || ||||||| ||
Sbjct 230 AGAATTCCGTACGGAGGATCGACATGGTTATGATTGGTGTGATGGATGATACAAAACAAC 289
Query 185 TTGAGGAAATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCTATTTGAAGAGA 244
|||||| |||||||||||| ||||||||||||||||||||||||| |||||||| ||||
Sbjct 290 ATGAGGAGATGGAGAATGATTTGCTTGGTGTGAAGGAGGACACAAAACTATTTGAGGAGA 349
Query 245 TGATGGAGTCAG-CAAAAGATAGGATGATCCGTTCAGTGGAAGAACTCTTAGGAGGAGAA 303
|||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 350 TGATGGAGTC-GACAAAAGATAGGATGATCCGTTCGGTGGAGGAACTCTTAGGAGGAGAA 408
Query 304 -AGCCTTAATCTTGGATCTTACGAAAACATCCACACTTGGCTTAGTGGCGTTCTTACTAG 362
|| ||||| |||||||||||| ||| ||||||||||||| ||| |||||||||||||
Sbjct 409 TTTCC-TAATCGTGGATCTTACGAGAACGTCCACACTTGGCTCAGTAGCGTTCTTACTAG 467
Query 363 CTACATCACATGTATCGACGGAATTGGTGAAGGTGCCTATAAACGTCGGGTCGAGCCAGA 422
||||||||||||||||||| |||||||||||||||||||||||| || ||||||||| |
Sbjct 468 TTACATCACATGTATCGACGAAATTGGTGAAGGTGCCTATAAACGCCGTGTCGAGCCAAA 527
Query 423 GCTTGAAGACCTTTA-TTCTAAGGCAAGAGTAGCTTTGGCAATTTTTATCTCCACTTCTC 481
||||||||||| | | ||||| ||||||| |||||||||| | |||||||||| ||| |
Sbjct 528 GCTTGAAGACC-TCATTTCTAGGGCAAGAATAGCTTTGGCTCTCTTTATCTCCATTTCAC 586
Query 482 CGAGAGACGACACCGAACTTAAGTCGGTGGTTCCCAATGGCCCGTCTTGGTTA-TCCAAC 540
|||||||| |||||||||||| |||||| |||||||| |||| ||||||||| ||| |
Sbjct 587 CGAGAGACAACACCGAACTTATCTCGGTGATTCCCAATAGCCCTTCTTGGTTATTCC-AT 645
Query 541 GTTGACAAGAAATATCTATATCTTAATCCTGAGGTTCTAAAGAAGATTGCCGATTTTGTG 600
|||||||||||| |||||||||| ||| |||||| ||||||||||||||| ||| |||||
Sbjct 646 GTTGACAAGAAAGATCTATATCTCAATGCTGAGGCTCTAAAGAAGATTGCTGATGTTGTG 705
Query 601 GTCGCAAAAGATGGGAGCGGAAATTACAACACAGTGAATGCGGCCATTGCAGCGGCACCT 660
||||| || ||||||| |||||| |||| |||||||||||||||||||||||||||||||
Sbjct 706 GTCGCGAAGGATGGGACCGGAAAGTACAGCACAGTGAATGCGGCCATTGCAGCGGCACCT 765
Query 661 GAACACGGT-AGAAAGAGATTCGTCATTTATATAAAGACAGGCGTCTATGATGAAATCGT 719
||||| | | ||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct 766 CAACACAGCCA-AAAGAGATTCGTCATCTATATAAAGACAGGCATTTATGATGAAATCGT 824
Query 720 CCG-CATTGGGAGTATGAAAACCAATTTAACTCTCATCGGTGATGGTCAAGATTCAACCA 778
| | ||||| || || |||| ||||||||||||| || |||||||||||||||| |||||
Sbjct 825 C-GTCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCAAGATTTAACCA 883
Query 779 TCATCACGGGCAATTTAAGCTG-TAACGATGGTA-AATCAACGTTCCAA-ACCGCAACTG 835
|||||||| |||||||||| || || | ||| || || ||||||| || ||||||||||
Sbjct 884 TCATCACGAGCAATTTAAG-TGCTAGCAATGTTAGAAG-AACGTTC-AACACCGCAACTG 940
Query 836 TTG 838
|||
Sbjct 941 TTG 943
Score = 617 bits (334), Expect = 8e-176
Identities = 561/669 (84%), Gaps = 22/669 (3%)
Strand=Plus/Plus
Query 913 GCTTCTAATGGTGATGGCTTCATCGGAATAGACATGTGCTTCCGGAACACGGCCGGACCG 972
|||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||| |||
Sbjct 943 GCTTCTAATGGTAATGGATTCATCGGAGTAGACATGTGCTTCCGAAACACGGCCGGGCCG 1002
Query 973 GCAAAGGGACAAGCTGTTGCCCTCCGTGTGAGTGGTGATATATCCGTTATTTACCGATGC 1032
||||| |||| |||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 1003 GCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTCATTTATAGATGC 1062
Query 1033 CGTATCGAGGGGTATCAGGATACGTTGTATCCTCACAGACACCGCCAATTTTATAGGGAG 1092
||| ||||||| ||||||||| | |||||||||||||| ||||||| |||||||| |||
Sbjct 1063 CGTGTCGAGGGATATCAGGATGCCTTGTATCCTCACAGTGACCGCCAGTTTTATAGAGAG 1122
Query 1093 TTCTTTATTACCGGCACTGTAGATTTTATCTGTGGAAACGCCGCGGCCGTCTTCCAATTC 1152
| |||||||||||||||||||||||| || ||||| ||||| | ||| ||||| ||||||
Sbjct 1123 TGCTTTATTACCGGCACTGTAGATTTCATTTGTGGGAACGCGGTGGCGGTCTTTCAATTC 1182
Query 1153 TGCCAAATTGTAGCAAGACAACCGAGGAAGGGGCAGAGCAATGTGATAACCGCTCAGTCA 1212
||||| ||||||||||||||||| | || ||||||||||||||| |||||||||||||||
Sbjct 1183 TGCCAGATTGTAGCAAGACAACCTAAGATGGGGCAGAGCAATGTCATAACCGCTCAGTCA 1242
Query 1213 CGCGAAAGTGAGGACGACA-ACTCGGGCTTCTCCATTCAAAAATGCAATATCACTACAAG 1271
|||| | | ||||| | ||||||||||| | |||||||||||||| || ||| ||||
Sbjct 1243 CGCGCATTTAAGGAC-ATTTACTCGGGCTTCACGATTCAAAAATGCAACATTACTGCAAG 1301
Query 1272 -TCCTGATCTAGATCTGGTTAAAGCAACTGTGAAGACGTTTTTTGGTCGTCCATGGAAGA 1330
|| |||||||| | | | |||| || || |||| | |||| | || |||| ||
Sbjct 1302 CTCG-GATCTAGA-CACG--A---CAACCGTTAAAACGTATCTTGGAAGACCTTGGAGGA 1354
Query 1331 -AGTATTCAACAGTTGT-GATTCTACAATCTTTTATCGGTGATTTAGTTGATCCCGCAGG 1388
| | ||||||||| | | || | || ||||| ||||||||||||||||||||||| ||
Sbjct 1355 TATT-TTCAACAGTCGCAG-TTATGCAGTCTTTCATCGGTGATTTAGTTGATCCCGCTGG 1412
Query 1389 CTGGACTCCTTGGGAAGGA-ACAACTGGTCTATCAACTCTCTACTACGGCGAATATCAAA 1447
||||||||||||||||||| | ||||||| | ||||||||| ||||| ||||||||||||
Sbjct 1413 CTGGACTCCTTGGGAAGGAGA-AACTGGTTTGTCAACTCTCCACTACCGCGAATATCAAA 1471
Query 1448 ACATGGGTCCAGGAGCTGTGACTAGCAAAAGGGTAAAGTGGAGAGGGTTTAGAGTTCTTA 1507
||| ||||||||||||||||||||||| |||||| |||||| ||| |||| |||| | |
Sbjct 1472 ACAGGGGTCCAGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTCAGGCTTTAAAGTTATGA 1531
Query 1508 CGGATCCTAA-CGAGGCCGCAAAATTAACTGTTAGC-AAGCTATTAGATGGA-AAATCGT 1564
|||||||| | |||| || |||| ||||| ||| ||||| ||||||||| ||| | |
Sbjct 1532 AAGATCCTAAAC-AGGCTACAGAATTCACTGT-AGCCAAGCTCTTAGATGGAGAAA-CTT 1588
Query 1565 GGCTGAAAG 1573
|| ||||||
Sbjct 1589 GGTTGAAAG 1597
> AT3G27980.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:10393904-10395861 FORWARD LENGTH=1494
Length=1494
Score = 665 bits (360), Expect = 0.0
Identities = 569/670 (85%), Gaps = 14/670 (2%)
Strand=Plus/Plus
Query 913 GCTTCTAATGGTGATGGCTTCATCGGAATAGACATGTGCTTCCGGAACACGGCCGGACCG 972
|||||||||||| |||| ||||||||| ||||||||||||| || |||||||||||||||
Sbjct 808 GCTTCTAATGGTAATGGATTCATCGGAGTAGACATGTGCTTTCGAAACACGGCCGGACCG 867
Query 973 GCAAAGGGACAAGCTGTTGCCCTCCGTGTGAGTGGTGATATATCCGTTATTTACCGATGC 1032
||||| |||| |||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct 868 GCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTCATTTATAGATGT 927
Query 1033 CGTATCGAGGGGTATCAGGATACGTTGTATCCTCACAGACACCGCCAATTTTATAGGGAG 1092
||| ||||||| ||||||||| | ||||||||||| || ||||||| ||||||||||||
Sbjct 928 CGTGTCGAGGGATATCAGGATGCCTTGTATCCTCATAGTGACCGCCAGTTTTATAGGGAG 987
Query 1093 TTCTTTATTACCGGCACTGTAGATTTTATCTGTGGAAACGCCGCGGCCGTCTTCCAATTC 1152
| ||||||||||||||||||||||||||| ||||||||||| | ||| ||||| ||||||
Sbjct 988 TGCTTTATTACCGGCACTGTAGATTTTATATGTGGAAACGCGGTGGCGGTCTTTCAATTC 1047
Query 1153 TGCCAAATTGTAGCAAGACAACCGAGGAAGGGGCAGAGCAATGTGATAACCGCTCAGTCA 1212
||||| |||||||||||||| || | || ||||||||||||||| ||||||||||| |||
Sbjct 1048 TGCCAGATTGTAGCAAGACAGCCTAAGATGGGGCAGAGCAATGTCATAACCGCTCAATCA 1107
Query 1213 CGCGAAAGTGAGGACGACAACTCGGGCTTCTCCATTCAAAAATGCAATATCACTACAAGT 1272
|||| | | |||||| ||| ||||||||||| |||||||| ||||| ||||| ||||||
Sbjct 1108 CGCGCGACTAAGGACGTCAAATCGGGCTTCTCAATTCAAAACTGCAACATCACAACAAGT 1167
Query 1273 CCTGATCTAGATCTGGTTAAAGCAACTGTGAAGACGTTTTTTGGTCGTCCATGGAAGA-A 1331
| ||||||||| | |||||| || || |||| | |||| | || |||| || |
Sbjct 1168 TCGGATCTAGAT------ACAGCAACCGTAAAAACGTATCTTGGAAGACCTTGGAGGAGA 1221
Query 1332 GTATTCAACAGTTGTGATTCTACAATCTTTTATCGGTGATTTAGTTGATCCCGCAGGCTG 1391
| ||||||||| | | |||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1222 TT-TTCAACAGTCGCGGTTCTGCAATCTTTCATCGGTGATTTAGTTGATCCCGCAGGCTG 1280
Query 1392 GACTCCTTGGGAAGGA-ACAACTGGTCTATCAACTCTCTACTACGGCGAATATCAAAACA 1450
|||||||||| ||||| | ||||||||||||||||||| ||||| ||||||||||||| |
Sbjct 1281 GACTCCTTGGAAAGGAGA-AACTGGTCTATCAACTCTCCACTACCGCGAATATCAAAATA 1339
Query 1451 TGGGTCCAGGAGCTGTGACTAGCAAAAGGGTAAAGTGGAGAGGGTTTAGAGTTCTTACGG 1510
|||||| |||||||||||||||| |||||| |||||| ||| |||| |||| | | |
Sbjct 1340 GGGGTCCGGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTCAGGATTTAAAGTTATGAAAG 1399
Query 1511 ATCCTAACGAGGCCGCAAAATTAACTGTTAGC-AAGCTATTAGATGGA-AAATCGTGGCT 1568
||||||| |||| || |||| ||||| ||| ||||| ||||||||| ||| | |||||
Sbjct 1400 ATCCTAAAAAGGCTACAGAATTCACTGT-AGCCAAGCTCTTAGATGGAGAAA-CTTGGCT 1457
Query 1569 GAAAGCAAGT 1578
||||| ||||
Sbjct 1458 GAAAGAAAGT 1467
Score = 520 bits (281), Expect = 2e-146
Identities = 440/513 (86%), Gaps = 26/513 (5%)
Strand=Plus/Plus
Query 333 CCACACTTGGCTTAGTGGCGTTCTTACTAGCTACATCACATGTATCGACGGAATTGGTGA 392
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 315 CCACACTTGGCTTAGTAGCGTTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGA 374
Query 393 AGGTGCCTATAAACGTCGGGTCGAGCCAGAGCTTGAAGACCTTTATT-CTAAGGCAAGAG 451
||||||||||||||| |||||||||||| |||||||| |||| ||| ||| ||||||||
Sbjct 375 AGGTGCCTATAAACGCCGGGTCGAGCCAAAGCTTGAAAACCTC-ATTTCTAGGGCAAGAG 433
Query 452 TAGCTTTGGCAATTTTTATCTCCACTTCTCCGAGAGACGACACCGAACTTAAGTCGGTGG 511
||| |||||| |||||||||||| ||| | ||||||| |||||||||||| ||||||
Sbjct 434 TAGTTTTGGCTCTTTTTATCTCCATTTCACTGAGAGACAACACCGAACTTATCTCGGTGA 493
Query 512 TTCCCAATGGCCCGTCTTGGTTAT-CCAACGTTGACAAGAAATATCTATATCTTAATCCT 570
||||||||||||| |||||||||| ||| |||||||||||| |||||||||| |||
Sbjct 494 TTCCCAATGGCCCTTCTTGGTTATTCCAT-GTTGACAAGAAAGATCTATATCTCAAT--- 549
Query 571 GAGGTTCTAAAGAAGATTGCCGATTTTGTGGTCGCAAAAGATGGGAGCGGAAATTACAAC 630
| || || |||||| ||| |||||||||| || ||||||| |||||| |||| |
Sbjct 550 G-----CT---GA-GATTGCTGATGTTGTGGTCGCGAAGGATGGGACCGGAAAGTACAGC 600
Query 631 ACAGTGAATGCGGCCATTGCAGCGGCACCTGAACACGGT-AGAAAGAGATTCGTCATTTA 689
|||||||||||||||||||||||||||||| ||||| | | ||||||||||||||| ||
Sbjct 601 ACAGTGAATGCGGCCATTGCAGCGGCACCTCAACACAGCCA-AAAGAGATTCGTCATCTA 659
Query 690 TATAAAGACAGGCGTCTATGATGAAATCGTCCG-CATTGGGAGTATGAAAACCAATTTAA 748
||||||||||||| | ||||||||||||||| | ||||| || || |||| |||||||||
Sbjct 660 TATAAAGACAGGCATTTATGATGAAATCGTC-GTCATTGAGAATACGAAACCCAATTTAA 718
Query 749 CTCTCATCGGTGATGGTCAAGATTCAACCATCATCACGGGCAATTTAAGCTG-TAACGAT 807
|||| || |||||||||||||||| |||||||||||| |||||||||||| | || | ||
Sbjct 719 CTCTTATAGGTGATGGTCAAGATTTAACCATCATCACAGGCAATTTAAGC-GCTAGCAAT 777
Query 808 GGTA-AATCAACGTTCCAA-ACCGCAACTGTTG 838
| || || ||||| | || |||||||||||||
Sbjct 778 GTTAGAAG-AACGTAC-AACACCGCAACTGTTG 808
Score = 316 bits (171), Expect = 3e-85
Identities = 224/249 (90%), Gaps = 5/249 (2%)
Strand=Plus/Plus
Query 10 GTTTGCAAAGGATA---TGACGACAAACAGTCATGTCAAAATCTTTTGTTGGAGCTCAA- 65
||| |||||| ||| ||| |||||||||||||||||||| |||||||||||||| ||
Sbjct 55 GTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAACCTTTTGTTGGAGCTTAAG 114
Query 66 GAGGGTATCCTCGTCACTCTCGGAGATGAGATGTTGTGACTTATTGATCATCATTTTGAA 125
| |||| || ||||||||||||||||| ||| || ||||||||||||||||| |||||||
Sbjct 115 GCGGGT-TCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGAA 173
Query 126 GAATTCCGTGTGGAGGATCGACATGGCTATGATTGGTGTGATGGAAGACACAAAACTACT 185
||||||||| |||||||||||||||||||||||||||||||||| || ||||||| ||
Sbjct 174 GAATTCCGTACGGAGGATCGACATGGCTATGATTGGTGTGATGGATGATACAAAACAACA 233
Query 186 TGAGGAAATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCTATTTGAAGAGAT 245
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 234 TGAAGAGATGGAGAATGATATGCTTGGTGTGAAGGAGGACACAAATCTATTTGAGGAGAT 293
Query 246 GATGGAGTC 254
|||||||||
Sbjct 294 GATGGAGTC 302
> AT1G36700.1 | Symbols: | pseudogene, hypothetical protein |
chr1:13877990-13878553 REVERSE LENGTH=564
Length=564
Score = 556 bits (301), Expect = 2e-157
Identities = 423/478 (88%), Gaps = 23/478 (5%)
Strand=Plus/Plus
Query 30 CAAACAGTCATGTCAAAATC-TTTTGTTGGAGCTCAAGAGGGTATCCTCGTCACTCTCGG 88
|||||||||||||||||| | ||||||||||||| |||| || ||||||||||||||
Sbjct 77 CAAACAGTCATGTCAAAA-CTTTTTGTTGGAGCTTAAGACAGTTTCCTCGTCACTCTCAA 135
Query 89 AGATGAGATGTTGTGACTTATTGATCATCATTTTGAAGAATTCCGTGTGGAGGATCGACA 148
|||||||| | ||||||||||||||||| ||||||||||||||||| |||||| ||||
Sbjct 136 AGATGAGACGCCGTGACTTATTGATCATCGTTTTGAAGAATTCCGTG-CGAGGATTGACA 194
Query 149 TGGCTATGATTGGTGTGATGGAAGACACAAAACTACTTGAGGAAATGGAGAATGATATGC 208
||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||
Sbjct 195 TGGCTATGATTGGTGTGATGGAAGAGACAAAACAACTTGAGGAGATGGAGAATGATATGC 254
Query 209 TTGGTGTGAAGGAGGACACAAATCTATTTGAAGAGATGATGGAGTCAGCAAAAGATAGGA 268
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 255 TTGGTGTGAAGGAGGACACAAATCTATTTGAAGAGATGATGGAGTTGGCAAAAGATAGGA 314
Query 269 TGATCCGTTCAGTGGAAGAACTCTTAGGAGGAGAAAGCCTTAATCTTGGATCTTACGAAA 328
||||||||| | | |||||||||||||| ||||||||||||||||||||
Sbjct 315 TGATCCGTT---T--------T---AGGAGGAGAAAGCCCTAATCTTGGATCTTACGAAA 360
Query 329 ACATCCACACTTGGCTTAGTGGCGTTCTTACTAGCTACATCACATGTATCGACGGAATTG 388
|| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 361 ACGTCCACACTTAGCTTAGTGGCGTTCTTACTAGCTACATCACATGTATCAACGAAATTG 420
Query 389 GTGAAGGTGCCTATAAACG-TCGGGTCGAGCCAGAGCTTGAAGACCTTTATT-CTAAGGC 446
||||||||||||||||||| | ||||||||||| | ||||| ||||| ||| ||| |||
Sbjct 421 GTGAAGGTGCCTATAAACGAT-GGGTCGAGCCATACCTTGAGGACCTC-ATTTCTAGGGC 478
Query 447 AAGAGTAGCTTTGG-CAATTTTTATCTCCACTTCTCCGAGAGACGACACCGAACTTAA 503
|||||||||||||| | |||||||||||| ||| ||||||||| ||||| |||||||
Sbjct 479 AAGAGTAGCTTTGGTCC-TTTTTATCTCCATTTCCCCGAGAGACAACACCAAACTTAA 535
> AT1G44980.1 | Symbols: PME7, ATPME7 | pectin methylesterase 7
| chr1:17004256-17005923 REVERSE LENGTH=741
Length=741
Score = 414 bits (224), Expect = 1e-114
Identities = 346/405 (85%), Gaps = 8/405 (2%)
Strand=Plus/Plus
Query 438 TTCTAAGGCAAGAGTAGCTTTGGCAATTTTTATCTCCACTTCTCCGAGAGACGACACCGA 497
||||| |||||||| |||||| || |||||||||| | ||| | ||||||| |||||||
Sbjct 75 TTCTAGGGCAAGAGAAGCTTTAGCCCTTTTTATCTCTATTTCGCTGAGAGACAACACCGA 134
Query 498 ACTTAAGTCGGTGGTTCCCAATGGCCCGTCTTGGTTATC-CAACGTTGACAAGAAATATC 556
|||||| | |||||||||||||||||||||||||||||| || ||||||||||||| |||
Sbjct 135 ACTTAACTTGGTGGTTCCCAATGGCCCGTCTTGGTTATCTCA-CGTTGACAAGAAAGATC 193
Query 557 TATATCTTAATCCTGAGGTTCTAAAGAAGATTGCCGATTTTGTGGTCGCAAAAGATGGGA 616
||||||| ||| |||| ||||||||| ||| ||||| || ||||||| || |||| ||
Sbjct 194 TATATCTCAATGATGAGACTCTAAAGAAAATTACCGATATTCTGGTCGCGAAGGATGTGA 253
Query 617 GCGGAAATTACAACACAGTGAATGCGGCCATTGCAGCGGCACCTGAACACGGT-AGAAAG 675
|||||||||||| | |||||||| ||||||||||||||||||| ||||| | | ||||
Sbjct 254 CCGGAAATTACAATATAGTGAATGTGGCCATTGCAGCGGCACCTCAACACAGCCA-AAAG 312
Query 676 AGATTCGTCATTTATATAAAGACAGGCGTCTATGATGAAATCGTCCG-CATTGGGAGTAT 734
||||||||||||||||| |||||| || |||||| ||||||||| | |||||||| |||
Sbjct 313 AGATTCGTCATTTATATTAAGACAAGCATCTATGTTGAAATCGTT-GTCATTGGGAATAT 371
Query 735 GAAAACCAATTTAACTCTCATCGGTGATGGTCAAGATTCAACCATCATCACGGGCAATTT 794
|||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||
Sbjct 372 GAAATCCAATTTAACTCTTATCGCTGATGGTCAAGATTCAACCATCATCACATTCAATTT 431
Query 795 AAGCTGTAACGATGGTAAATCAACGTTCCAA-ACCGCAACTGTTG 838
||||| || | || ||||| ||||||| || ||||||||| |||
Sbjct 432 AAGCTCTAGCAATAGTAAAAGAACGTTC-AACACCGCAACTTTTG 475
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79266660555
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5