BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg914202 Length=558 Score E Sequences producing significant alignments: (Bits) Value AT3G27999.1 | Symbols: | Plant invertase/pectin methylesterase... 560 5e-159 AT4G03945.1 | Symbols: | Plant invertase/pectin methylesterase... 547 4e-155 > AT3G27999.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr3:10402872-10403511 FORWARD LENGTH=640 Length=640 Score = 560 bits (303), Expect = 5e-159 Identities = 483/568 (85%), Gaps = 20/568 (4%) Strand=Plus/Plus Query 1 ATGGTTGCATACGTCGCTAAAAACTTTTCATCGGCTTGTTTAGTGGTTTTAC-TCTTTTT 59 ||||| |||||||||| |||||||||||||| ||||||||| ||||||||| || |||| Sbjct 15 ATGGTGGCATACGTCGATAAAAACTTTTCATTGGCTTGTTTTTTGGTTTTACTTC-TTTT 73 Query 60 TGTTGTCTCATCGTATGCAAGGTTTAGTACGATGGTTACAAAAGATGAGATCCACTTCAT 119 ||||| |||||||||||||||||||| |||| |||||||||||||| |||||||| ||| Sbjct 74 TGTTGACTCATCGTATGCAAGGTTTAATACGTTGGTTACAAAAGATCAGATCCACACCAT 133 Query 120 ATGCACCCAACAAGATATCAATTCTTCATTATGTTTT-GAGATTCTAAA-ACCAAACCCT 177 ||||||| ||||||| |||||||||||||| |||||| || ||||||| | |||| ||| Sbjct 134 ATGCACCAAACAAGAGATCAATTCTTCATTTTGTTTTCAAG-TTCTAAATA-CAAATCCT 191 Query 178 GAAATTACTAGATTAGATTTTTCTGGTCTCTTCAAATTTTTGCTCAATTATCAGGCTCGA 237 |||||| ||| |||||||||| || |||||||||||||| |||| ||||||||||||| | Sbjct 192 GAAATTGCTAAATTAGATTTTCCTAGTCTCTTCAAATTTGTGCTTAATTATCAGGCTCAA 251 Query 238 AATATTTCGGATACGCTGAAGCAATTTAAATTATCAGGAGGCTACACGCGGGATATTGAG 297 ||||||||||||||||||||||||||||| |||||||||||||||| || |||| |||| Sbjct 252 AATATTTCGGATACGCTGAAGCAATTTAAGTTATCAGGAGGCTACATGCCGGATGTTGAA 311 Query 298 TCTAAATATT-CTGTATGCATAGAAGTATATGAAGATGCTCTAGCCAATCGTGATAA-AG 355 ||| ||||| || ||||||||||| |||||| | ||||| | | |||||||||| | Sbjct 312 TCTCAATATAGCT-TATGCATAGAATTATATGGATATGCTTTCGATAATCGTGATATTA- 369 Query 356 CCCTCAAATATTTGGCTGCCAAAGACTATGCCAGCGTAAACTCTATGGTCAGTGCAACAA 415 |||||| |||||| ||||||||||||||| |||||||||| ||| |||||||| ||| Sbjct 370 CCCTCAGATATTTAGCTGCCAAAGACTATAACAGCGTAAACACTAGGGTCAGTGGAACGT 429 Query 416 TGACAA-ATATGTCTACGTGTACCGATGATTTGTCAACAATGAAACCAATACCAAAATTA 474 || || |||| | ||||||||| |||||||||||||||||||| ||||||||| |||| Sbjct 430 TGG-AAGATATATTTACGTGTACTGATGATTTGTCAACAATGAAGCCAATACCACAATTT 488 Query 475 TTTATAACGAAAAGTAATGTT-ATTGCAGA-TCTGTCTAACATTATATTTGTGATTCTCG 532 ||||| ||| |||||||| || ||| ||| | ||||||| ||| | || |||||||||| Sbjct 489 TTTATGACGGAAAGTAAT-TTGATTAAAGAAT-TGTCTAAGATTCTCTTAGTGATTCTCG 546 Query 533 AACATTGCATAAG-aa-a-aaaa-aaTT 556 || || |||||| || | |||| |||| Sbjct 547 AATGTTTCATAAGTAAGAGAAAAGAATT 574 > AT4G03945.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr4:1877872-1878545 FORWARD LENGTH=674 Length=674 Score = 547 bits (296), Expect = 4e-155 Identities = 479/565 (85%), Gaps = 21/565 (4%) Strand=Plus/Plus Query 1 ATGGTTGCATACGTCGCTAAAAACTTTTCATCGGCTTGTTTAGTGGTTTTAC-TCTTTTT 59 |||||||| ||||||| |||||||||||||| ||||||||| ||||||||| || |||| Sbjct 17 ATGGTTGCTTACGTCGATAAAAACTTTTCATTGGCTTGTTTTTTGGTTTTACTTC-TTTT 75 Query 60 TGTTGTCTCATCGTATGCAAGGTTTAGTACGATGGTTACAAAAGATGAGATCCACTTCAT 119 ||||| |||||||||||||||||||| |||| |||||||||||||| |||||||| ||| Sbjct 76 TGTTGACTCATCGTATGCAAGGTTTAATACGTTGGTTACAAAAGATCAGATCCACACCAT 135 Query 120 ATGCACCCAACAAGATATCAATTCTTCATTA-TGTTTT-GAGATTCTAAAAC-CAAACCC 176 ||||||| |||||||||||||||||||| || |||||| || |||| |||| |||| || Sbjct 136 ATGCACCAAACAAGATATCAATTCTTCA-TATTGTTTTCAAG-TTCT-AAACGCAAATCC 192 Query 177 TGAAATTACTAGATTAGATTTTTCTGGTCTCTTCAAATTTTTGCTCAATTATCAGGCTCG 236 ||||||| |||||||||||||| || |||||||||||||| |||| ||||||||||||| Sbjct 193 TGAAATTGCTAGATTAGATTTTCCTAGTCTCTTCAAATTTGTGCTTAATTATCAGGCTCA 252 Query 237 AAATATTTCGGATACGCTGAAGCAATTTAAATTATCAGGAGGCTACACGC-GGGATATTG 295 ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct 253 AAATATTTCAGATAAGCTGAAGCAATTTAAATTATCAGGAGGCTACACGCCGGG-TGTTG 311 Query 296 AGTCTAAATATT-CTGTATGCATAGAAGTATATGAAGATGCTCTAG-CCAATCGTGATAA 353 | ||||||||| || |||| |||||| | |||||| || || | | || |||||| | Sbjct 312 AATCTAAATATAACT-TATGTATAGAATTTTATGAAAATTCTTTCGACCGG-CGTGATGA 369 Query 354 AGCCCTCAAATATTTGGCTGCCAAAGACTATGCCAGCGTAAACTCTATGGTCAGTGCAAC 413 |||||||| ||||||||||||||||||||||| |||||||||| |||||||| ||| ||| Sbjct 370 AGCCCTCAGATATTTGGCTGCCAAAGACTATGGCAGCGTAAACACTATGGTCGGTGGAAC 429 Query 414 AATGACAAATATGT-CTACGTGTACCGATGATTTGTCAACAATGAAACCAATACCAAAAT 472 || |||||||| | || ||| | |||||||||||||||||||| ||| ||||| ||| Sbjct 430 GGCGATAAATATGTTCAAC-TGTGCTGATGATTTGTCAACAATGAAGCCAGTACCACAAT 488 Query 473 TATTTATAACGAAAAGTAATGTT-ATTGCAGA-TCTGTCTAACATTATATTTGTGATTCT 530 | ||| | ||| |||||||| || ||| ||| | ||||||| ||| | || |||||||| Sbjct 489 TTTTTGTGACGGAAAGTAAT-TTGATTAAAGAAT-TGTCTAAGATTCTCTTAGTGATTCT 546 Query 531 CGAACATTGCATAAGaaa-aaaaaa 554 ||| || |||||| || |||||| Sbjct 547 AGAATGTTTCATAAGTAAGAAAAAA 571 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26774800351 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5