BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg914277
Length=1275
Score E
Sequences producing significant alignments: (Bits) Value
AT1G51420.1 | Symbols: ATSPP1, SPP1 | sucrose-phosphatase 1 | c... 1958 0.0
AT2G35840.1 | Symbols: | Sucrose-6F-phosphate phosphohydrolase... 1230 0.0
> AT1G51420.1 | Symbols: ATSPP1, SPP1 | sucrose-phosphatase 1 |
chr1:19064768-19066704 REVERSE LENGTH=1356
Length=1356
Score = 1958 bits (1060), Expect = 0.0
Identities = 1207/1278 (94%), Gaps = 9/1278 (1%)
Strand=Plus/Plus
Query 1 ATGGAGCGGCTAACATCTTCTCCTCGTCTAATGATAGTCTCAGATCTTGACGAAACAATG 60
||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| |||
Sbjct 1 ATGGAGCGGTTAACATCTCCTCCTCGTCTAATGATAGTCTCCGATCTTGACGAAACCATG 60
Query 61 GTTGATCATCATAAAGATCCAGAGAATCTATCTCTATTGAGGTTTAATTCATTGTGGGAA 120
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 61 GTTGATCATCATAAAGATCCTGAGAATCTAGCTCTATTGAGGTTTAATTCATTGTGGGAA 120
Query 121 GACGCTTATCGACACGATTCTCTTCTTGTTTTCTCAACCGGAAGAGCACAAACAATGTAC 180
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct 121 GACGCTTATCGACACGACTCTCTTCTTGTTTTCTCAACAGGAAGAGCTCAAACAATGTAC 180
Query 181 AAAAAACTGAGAAAAGAGAAGCCTTTGTTAACCCCTGATGTTATTATTACATCTGTAGGA 240
|| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 181 AAGAAACTGAGAAAAGAGAAACCTTTGTTAACCCCTGATGTTATCATTACTTCTGTAGGA 240
Query 241 ACTGAGATTGCTTATGGTAACTCCATGGTTCTTGATGATAATTGGGTTGAAATCTTGAAT 300
|||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 241 ACTGAGATAGCTTATGGTAACTCAATGGTTCCTGATGATAATTGGGTTGAAATCTTGAAT 300
Query 301 AACAAATGGGACCGAGGAATCGTCGAAGAAGAAACCAGCAAGTTCCCTGAGTTAACTCTT 360
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 301 AAGAAATGGGACCGAGGAATCGTCCAAGAAGAAACCAGCAAGTTCCCTGAGTTAACTCTT 360
Query 361 CAGGGTGAAACTGAACAGAGGCCACACAAGCTTAGTTTTAACATTGACAAAAGTAAGGTT 420
||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct 361 CAGGGTGAAACAGAACAGAGGCCACACAAGCTTAGCTTTAATATTGACAAGAGTAAGGTT 420
Query 421 AAGGCAGTGACTAAGGAGCTATCTCAGCGGTTGGAGAAACGCGGGGTGGATATCAAGA-T 479
||||||||||| || |||||||||| |||||| |||||||| ||||| ||| |||| | |
Sbjct 421 AAGGCAGTGACGAAAGAGCTATCTCCGCGGTTAGAGAAACGTGGGGTTGATGTCAA-ATT 479
Query 480 AATTTTCAGTGGAGGAAACGCTTTCGATGTTTTACCAAAAGGTGGAGGAAAGGGACAAGC 539
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 480 CATTTTCAGTGGAGGAAACGCTTTCGATGTTTTAGCAAAAGGTGGAGGAAAGGGACAAGC 539
Query 540 TCTTGCTTATCTGCTAAAGAAGCTGAAGACTGAAGGAAAACACCCTGTTAACACTCTTGC 599
|||||||||||||||||||||||| |||||||||||||| | |||| | |||||||||||
Sbjct 540 TCTTGCTTATCTGCTAAAGAAGCTCAAGACTGAAGGAAAGCTCCCTATCAACACTCTTGC 599
Query 600 TTGTGGGGACTCTGGAAATGATACTGAACTATTTACCATTCCCAATGTTTATGGTGTCAT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 TTGTGGGGACTCTGGAAATGATACTGAACTATTTACCATTCCCAATGTTTATGGTGTCAT 659
Query 660 GGTAAGCAATGCTCAAGAAGAGTTGTTGGAGTGGTATGCTGAAAATGCGAAAGAGAATCC 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 660 GGTAAGCAATGCTCAAGAAGAGTTGTTGGAGTGGTATGCTGAAAATGCGAAAGACAATGC 719
Query 720 AAACATAATCCACGCAAATGAGAGGTGTGCGGGTGGGATTATACAAGCCATTGGTCACTT 779
||| |||||||| || | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 720 AAATATAATCCATGCGAGTGAGAGGTGTGCGGGTGGGATTACACAAGCCATTGGTCACTT 779
Query 780 TAAGCTCGGTCCAAACCTATCTCCAAGAGATGTTTCTGACTTCTTGGAGTGCAAGGCGGA 839
|||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 780 TAAGCTTGGTCCAAATCTTTCTCCAAGAGATGTTTCTGACTTCTTGGAGTGCAAGGCGGA 839
Query 840 TAATGTGAACCCGGGTCATGAGGTTGTCAAGTTTTTCTTGTTCTACGAGAGATGGAGACG 899
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 840 TAATGTGAACCCGGGTCATGAGGTTGTGAAGTTTTTCTTGTTCTACGAGAGATGGAGACG 899
Query 900 AGGTGAAGTTGAGAACTGTGA-GACATACACAGCAAGCCTCAAAGCTTCATGTCATCCTG 958
||||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||
Sbjct 900 AGGTGAAGTTGAGAACTGT-ACGACATACACATCAAGTCTCAAAGCTTCATGTCATCCTT 958
Query 959 CTGGTGTCTTTGTTCATCCATCTGGTGGAGAAAAGTCTCTCAGAGACACCATTGATGAGC 1018
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 959 CTGGTGTCTTTGTTCATCCATCTGGTGCTGAAAAGTCTCTCAGAGACACCATTGATGAGC 1018
Query 1019 TTGGAAAGTACTATGGAGACATGAAAGGGAAGAAGTTTCGGGTTTGGACAGATCAGGTCC 1078
|||| |||||||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 1019 TTGGCAAGTACTATGGAGACAAAAAAGGGAAGAAGTTTCGTGTTTGGACTGATCAGGTCT 1078
Query 1079 TGGCAACTGACACAACTCCAGGGACTTGGATAGTAAAGCTTGATAAATGGGAGCAGA-TA 1137
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1079 TGGCAACAGACACAACTCCAGGGACTTGGATAGTAAAGCTTGATAAATGGGAGCAGACT- 1137
Query 1138 GGGGATGAGAGGAAATGCTGCACAACAACGGTCAAATTCACCTCAAAGGAAGGAGAAGGG 1197
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1138 GGGGATGAGAGGAAATGTTGCACAACAACTGTCAAATTCACCTCAAAGGAAGGAGAAGGG 1197
Query 1198 TTTGTGTGGGAACATGTGCAGCAAATATGGTCGGAGGAAACAGAGATAAAGAAGGATGAT 1257
||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||
Sbjct 1198 TTTGTGTGGGAACATGTGCAGCAAATATGGTCGGAGGAAACAGAGATTAAG--G-ATGAT 1254
Query 1258 AGCAACTGGATCATCTGA 1275
||||||||||||||||||
Sbjct 1255 AGCAACTGGATCATCTGA 1272
> AT2G35840.1 | Symbols: | Sucrose-6F-phosphate phosphohydrolase
family protein | chr2:15053623-15056005 FORWARD LENGTH=1542
Length=1542
Score = 1230 bits (666), Expect = 0.0
Identities = 1087/1289 (84%), Gaps = 34/1289 (3%)
Strand=Plus/Plus
Query 1 ATGGAGCGGCTAACATCTTCTCCTCGTCTAATGATAGTCTCAGATCTTGA-CGAAACAAT 59
|||||||| ||||||||| |||||||| | ||||| ||||| |||||||| | | || ||
Sbjct 45 ATGGAGCGTCTAACATCTCCTCCTCGTTTGATGATTGTCTCTGATCTTGATC-ATACTAT 103
Query 60 GGTTGATCATCATAAAGATCCAGAGAATCTATCTCTATTGAGGTTTAATTCATTGTGGGA 119
||||||||||||| ||||| |||||||||||||| |||| || ||||| ||||||||
Sbjct 104 GGTTGATCATCAT---GATCCTGAGAATCTATCTCTGCTGAGATTCAATTCGTTGTGGGA 160
Query 120 AGACGCTTATCGACACGATTCTCTTCTTGT-TTTCTCAACCGGAAGAGCACAAACAATGT 178
| |||||||||| || || ||||||||||| ||| || || |||||| ||| ||| |||
Sbjct 161 ACACGCTTATCGCCATGACTCTCTTCTTGTGTTT-TCTACGGGAAGATCACCGACATTGT 219
Query 179 ACAAAAAACTGAGAAAAGAGAAGCCTTTGTTAACCCCTGATGTTATTATTACATCTGTAG 238
| ||| |||| ||||| ||||| |||||||| ||||||||| ||| |||| |||||||
Sbjct 220 ATAAAGAACTCAGAAAGGAGAAACCTTTGTTGACCCCTGATATTACCATTATGTCTGTAG 279
Query 239 GAACTGAGATTGCTTATGGTAACTCCATGGTTCTTGATGATAATTGGGTTGAAATCT-TG 297
||||||||||| ||||||||||||| ||||||| |||| || |||||||| | || ||
Sbjct 280 GAACTGAGATTACTTATGGTAACTCTATGGTTCCTGATCATGGTTGGGTTG-AGGCTCTG 338
Query 298 AATAACAAATGGGA-CCGAGGAATCGTCGAAGAAGAAACCAGCAAGTTCCCTGAGTTAAC 356
|| || |||||||| | || || ||| || ||||| | ||||| |||||||||||||
Sbjct 339 AACAATAAATGGGATTTG-GGTATTGTCAAACAAGAAGCTAGCAACTTCCCTGAGTTAAA 397
Query 357 TCTTCAGGGTGAAACTGAACAGAGGCCACACAAGCTTAG-TTTTAACATTGACAAA-AGT 414
||||||| |||||||| ||||||||||||||| |||| |||| | |||| ||| |||
Sbjct 398 GCTTCAGGCAGAAACTGAGCAGAGGCCACACAAGGTTAGCTTTT-ATGTTGA-AAAGAGT 455
Query 415 AAGGTTAAGGCAGTGACTAAGGAGCTATCTCAGCGGTTGGAGAAACGCGGGGTGGATATC 474
|||| | ||| ||| |||||||||||||| ||| |||| |||||| ||| ||||| ||
Sbjct 456 AAGGCTCAGGAAGTTACTAAGGAGCTATCACAGAGGTTCCTGAAACGTGGGCTGGATGTC 515
Query 475 AAGATAATTTTCAGTGGAGGAAACGCTTTCGATGTTTTACCAAAAGGTGGAGGAAAGGGA 534
|| ||||||| ||||||||| | | ||| ||| |||||||| |||||| |||||||||
Sbjct 516 AAAATAATTTACAGTGGAGGTATGGATTTGGATATTTTACCACAAGGTGCCGGAAAGGGA 575
Query 535 CAAGCTCTTGCTTATCTGCTAAAGAAGCTGAAGACTGAAGGAAAACACCCTGTTAACACT 594
||||| ||||| |||||||| ||||| ||||||||||| || |||| |||||| || |||
Sbjct 576 CAAGCGCTTGCATATCTGCTGAAGAAACTGAAGACTGAGGGGAAACTCCCTGTCAATACT 635
Query 595 CTTGCTTGTGGGGACTCTGGAAATGATACTGAACTATTTACCATTCCCAATGTTTATGGT 654
||||||||||| |||||||| |||||| |||| || |||| |||||| |||||||||||
Sbjct 636 CTTGCTTGTGGCGACTCTGGGAATGATGCTGAGCTGTTTAGTATTCCCGATGTTTATGGT 695
Query 655 GTCATGGTAAGCAATGCTCAAGAAGAGTTGTTGGAGTGGTATGCTGAAAATGCGAAAGAG 714
|| |||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||
Sbjct 696 GTTATGGTAAGCAATGCTCAAGAAGAGCTGTTGAAGTGGCATGCTGAAAATGCAAAAGAC 755
Query 715 AATCCAAACATAATCCACGCAAATGAGAGGTGTGCGGGTGGGATTATACAAGCCATTGGT 774
|| || || ||||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 756 AACCCTAAGGTAATCCATGCAAAGGAGAGGTGTGCAGGTGGGATTATACAAGCCATTGGT 815
Query 775 CACTTTAAGCTCGGTCCAAACCTATCTCCAAGAGATGTTTCTGACTTCTTGGAG-TGCAA 833
||||| ||||| ||||| ||||| |||||||||||||| ||||| ||||| ||| | |||
Sbjct 816 CACTTCAAGCTTGGTCCGAACCTTTCTCCAAGAGATGTCTCTGATTTCTTAGAGAT-CAA 874
Query 834 GGCGGATAATGTGAACCCGGGTCATGAGGTTGTCAAGTTTTTCTTGTTCTACGAGAGATG 893
|| ||| ||||||||||| ||||| |||||||| |||||||| |||||||||||||||||
Sbjct 875 GGTGGAGAATGTGAACCCTGGTCACGAGGTTGTGAAGTTTTTTTTGTTCTACGAGAGATG 934
Query 894 GAGACGAGGTGAAGTTGAGAACTGTGAGACATACACAGCAAGCCTCAAAGCTTCATGT-C 952
|||||| || || |||||||||| |||| |||||||||||||||||||||||||| || |
Sbjct 935 GAGACGGGGCGAGGTTGAGAACTCTGAGGCATACACAGCAAGCCTCAAAGCTTCA-GTTC 993
Query 953 ATCCTGCTGGTGTCTTTGTTCATCCATCTGGTGGAGAAAAGTCTCTCAGAGACACCATTG 1012
| || | |||||| ||||| |||||||||||| ||||| ||||| ||||| ||||| |
Sbjct 994 ACCCCGGTGGTGTGTTTGTCCATCCATCTGGTACTGAAAAATCTCTGAGAGATACCATCG 1053
Query 1013 ATGAGCTTG-GAAAGTACTATGGAGACATGA-AAGGGAAGAAGTTTCGGGTTTGGACAGA 1070
||||||| | | |||||| ||||||||| | |||||||||||||||| |||||| ||||
Sbjct 1054 ATGAGCT-GCGCAAGTACCATGGAGACAA-ACAAGGGAAGAAGTTTCGCGTTTGGGCAGA 1111
Query 1071 TCAGGTCCTGGCAACTGACACAACTCCAGGGACTTGGATAGTAAAGCTTGATAAATGGGA 1130
||| ||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 1112 TCAAGTCCTGGCAACAGACACTACTCCTGGGACATGGATAGTAAAGCTTGATAAATGGGA 1171
Query 1131 GCA-GATAGGGGATGAGAGGAA-ATGCTGCACAACAACGGTCAAATTCACCTCAAAGGAA 1188
||| ||| ||||| || | ||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1172 GCAAGAT-GGGGACGA-ACGAAGATGCTGCACAACAACTGTCAAATTCACCTCAAAGGAA 1229
Query 1189 GGAGAAGGGTTTG-TGTGGGAACATGTGCAGCAAATATGGTCGGAGGAAACAGA-GATAA 1246
|| || ||| ||| ||||||||||||| || |||| |||||| | |||||| | | |
Sbjct 1230 GGGGA-GGGATTGGTGTGGGAACATGTACAACAAACCTGGTCGAAAGAAACA-ATGGT-- 1285
Query 1247 AGAAGGATGATAGCAACTGGATCATCTGA 1275
|||||||||||||| |||||||||||||
Sbjct 1286 -GAAGGATGATAGCAGCTGGATCATCTGA 1313
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62700480705
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5