BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg914333 Length=564 Score E Sequences producing significant alignments: (Bits) Value AT1G51810.1 | Symbols: | Leucine-rich repeat protein kinase fa... 507 6e-143 AT3G21340.1 | Symbols: | Leucine-rich repeat protein kinase fa... 453 8e-127 AT2G04300.1 | Symbols: | Leucine-rich repeat protein kinase fa... 366 1e-100 AT3G46410.1 | Symbols: | Protein kinase superfamily protein | ... 237 9e-62 AT3G46384.1 | Symbols: | pseudogene, receptor-related protein ... 150 1e-35 > AT1G51810.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr1:19227119-19232359 REVERSE LENGTH=2666 Length=2666 Score = 507 bits (274), Expect = 6e-143 Identities = 409/474 (86%), Gaps = 10/474 (2%) Strand=Plus/Plus Query 1 ATGGTTCATAGGGACGTCAAAACCACAAATATATTGTTGAATGAACACTTT-GAGGCCAA 59 ||||||||||| || || ||||||||||||||||||||||||||||| ||| || |||| Sbjct 2142 ATGGTTCATAGAGATGTTAAAACCACAAATATATTGTTGAATGAACA-TTTCGATACCAA 2200 Query 60 ACTTGCTGATTTTGGACTTTCGAGGTCATTTCCAATTGAAGGCGAGACTCATGTGTCAAC 119 ||||||||||||||| |||||||| ||||| || || ||||| || |||||||| ||||| Sbjct 2201 ACTTGCTGATTTTGGGCTTTCGAGATCATTCCCGATAGAAGGGGAAACTCATGTATCAAC 2260 Query 120 AGTTGTTGCTGGTACTATTGGATACCTTGATCCCGAATATTACCGTACAAATAGGTTGAC 179 ||||||||||| |||||||| ||||| ||||||||||||||||| |||||| ||||||| Sbjct 2261 TGTTGTTGCTGGAACTATTGGTTACCTCGATCCCGAATATTACCGAACAAATTGGTTGAC 2320 Query 180 AGA-AAAGAGTGACGTCTACAGTTTTGGTA-TTGTAATATTGGAGATAATTACAAACAAA 237 || ||| ||||| || || |||||||| | ||||| |||||| ||| ||||||||| || Sbjct 2321 GGAGAAA-AGTGATGTGTATAGTTTTGG-AGTTGTATTATTGGTGATGATTACAAACCAA 2378 Query 238 CCAGTGATTGACCAAAACCGTGAAAAGCGACACATAGCAGAATGGGTAGGACAAATGCTT 297 || ||||| ||||||||||| |||||| |||| |||||||||||||| ||| ||||||| Sbjct 2379 CCCGTGATAGACCAAAACCGCGAAAAGAGACATATAGCAGAATGGGTGGGAGGAATGCTT 2438 Query 298 ACAAAAGGAGACATCAAAAGCATTACGGATCCAAGTCTCCATGGAGATTACGACTCTGGT 357 || ||||||||||||||||| ||||| ||||||| ||||| ||||||||| | |||||| Sbjct 2439 ACGAAAGGAGACATCAAAAGTATTACTGATCCAAATCTCCTTGGAGATTATAATTCTGGT 2498 Query 358 TCAGTTTGGAAAGCTGTCGAATTGGCAATGTCGTGTCTGAATCCTTCTTCGATAA-ATAG 416 || |||||||||||||| ||| | |||||||| ||| |||||||||||||||| | | || Sbjct 2499 TCTGTTTGGAAAGCTGTTGAACTAGCAATGTCATGTATGAATCCTTCTTCGATGACA-AG 2557 Query 417 ACCGACAATGACTCAAGTTGTTTCTGAACT-AAACGAGTGTTTAGCATCAGAAA 469 |||||||||| |||||||||||| |||||| ||| |||||||| || || |||| Sbjct 2558 ACCGACAATGTCTCAAGTTGTTTTTGAACTGAAA-GAGTGTTTGGCCTCTGAAA 2610 > AT3G21340.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:7511787-7515937 REVERSE LENGTH=2761 Length=2761 Score = 453 bits (245), Expect = 8e-127 Identities = 448/545 (82%), Gaps = 18/545 (3%) Strand=Plus/Plus Query 1 ATGGTTCATAGGGACGTCAAAACCACAAATATATTGTTGAATGAACACTTTGAGGCCAAA 60 |||||||||||||| || |||||||||||||||||||||||||||||| | | || || Sbjct 2137 ATGGTTCATAGGGATGTTAAAACCACAAATATATTGTTGAATGAACACCTCCATGCTAAG 2196 Query 61 CTTGCTGATTTTGGACTTTCGAGGTCATTTCCAATTGAAGGCGAGACTCATGTGTCAACA 120 || ||||||||||| |||||||| || |||||||||||||| || ||||||||||||||| Sbjct 2197 CTAGCTGATTTTGGGCTTTCGAGATCTTTTCCAATTGAAGGAGAAACTCATGTGTCAACA 2256 Query 121 GTTGTTGCTGGTACTATTGGATACCTTGATCCCGAATATTACCGTACAAATAGGTTGA-C 179 ||||||||||| ||| ||||||||||||||| ||||||||||| |||||| |||||| | Sbjct 2257 GTTGTTGCTGGAACTCCTGGATACCTTGATCCAGAATATTACCGAACAAATTGGTTGAAC 2316 Query 180 -AGAAAAGAGTGACGTCTACAGTTTTGGTATTGTAATATTGGAGATAATTACAAACAAAC 238 ||||||| ||| || || || ||||| |||||| |||| ||||| || |||||| ||| Sbjct 2317 GAGAAAAG--TGATGTTTATAGCTTTGGAATTGTACTATTAGAGATCATCACAAACCAAC 2374 Query 239 CAGTGATTGACCAAAACCGTGAAAAGCGACACATAGCAGAATGGGTAGGACAAATGCTTA 298 ||||| | |||| |||||||| | ||| |||||||||||||| || |||||||| Sbjct 2375 TTGTGATCAATCAAAGTCGTGAAAAACCACATATAGCAGAATGGGTGGGGTTAATGCTTA 2434 Query 299 CAAAAGGAGACAT-CAAAAGCATTACGGATCCAAGTCTCCATGGAGATTACGACTCTGGT 357 ||||||||||||| ||||| ||||| |||||||| || |||| ||||| ||||||||| Sbjct 2435 CAAAAGGAGACATTCAAAA-CATTATGGATCCAAAACTTTATGGTGATTATGACTCTGGT 2493 Query 358 TCAGTTTGGAAAGCTGTCGAATTGGCAATGTCGTGTCTGAATCCTTCTTC-GATAAATAG 416 || || |||| ||| || ||| | |||||||| ||||| ||||||||||| | || | || Sbjct 2494 TCTGTCTGGAGAGCAGTTGAACTAGCAATGTCATGTCTAAATCCTTCTTCAGCTAGA-AG 2552 Query 417 ACCGACAATGACTCAAGTTGTT-TCTGAACTAAACGAGTGTTTAG-CATCA-GAAAATTT 473 ||| |||||| ||||||||||| || ||| ||||||| ||||| | ||| | ||||| Sbjct 2553 ACCAACAATGTCTCAAGTTGTTATC-GAATTAAACGAATGTTT-GTCAT-ATGAAAACGC 2609 Query 474 GAGGGGAGGA-CAGAGTCAAGAGATGGATTCACAGAGTTCCATAGAAGTGAGTATGA-CA 531 || |||||| | ||||||| | ||| | ||| ||||||| |||||||| || |||| | Sbjct 2610 AAGAGGAGGAAC-GAGTCAAAACATGAACTCAGAGAGTTCAATAGAAGTCAGCATGAAC- 2667 Query 532 TTTGA 536 ||||| Sbjct 2668 TTTGA 2672 > AT2G04300.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr2:1493009-1497016 FORWARD LENGTH=2658 Length=2658 Score = 366 bits (198), Expect = 1e-100 Identities = 411/513 (80%), Gaps = 18/513 (4%) Strand=Plus/Plus Query 1 ATGGTTCATAGGGACGTCAAAACCACAAATATATTGTTGAATGAACACTTTGAGGCCAAA 60 ||||| ||||| || |||||||||||||||||||||||| ||||||| ||| ||||||| Sbjct 1984 ATGGTACATAGAGATGTCAAAACCACAAATATATTGTTGGATGAACATTTTCAGGCCAAG 2043 Query 61 CTTGCTGATTTTGGACTTTCGAGGTCATTTCCAATTGAAGGCGAGACTCATGT-GTCAAC 119 ||||||||||| || |||||||| || ||||| ||||||| || || | ||| | | || Sbjct 2044 CTTGCTGATTTCGGTCTTTCGAGATCTTTTCCTCTTGAAGGAGAAACCCGTGTGGAC-AC 2102 Query 120 AGTTGTTGCTGGTACTATTGGATACCTTGATCCCGAATATTACCGTACAAATAGGTTG-A 178 |||||||||||| ||| ||| ||||||||||| |||||||| || |||||| ||||| | Sbjct 2103 AGTTGTTGCTGGAACTCCTGGGTACCTTGATCCAGAATATTATCGAACAAATTGGTTGAA 2162 Query 179 CAGA-AAAGAGTGACGTCTACAGTTTTGGTATTGTAATATTGGAGATAATTACAAACAAA 237 | || ||| ||||| || || || ||||| || ||| |||| ||||| || |||||| || Sbjct 2163 C-GAGAAA-AGTGATGTTTATAGCTTTGGAATCGTACTATTAGAGATCATCACAAACCAA 2220 Query 238 CCA-GTGATTGACCAAAACCGTGAAAAGCGACACATAGCAGAATGGGTAGGACAAATGCT 296 || ||||| |||||| |||||||| | ||| ||||| |||||||| || ||||| Sbjct 2221 -CATGTGATCAACCAAAGTCGTGAAAAACCACATATAGCTGAATGGGTTGGGGTGATGCT 2279 Query 297 TACAAAAGGAGACATCAAAAGCATTACGGATCCAAG-TCTCCATGGAGATTACGACT-CT 354 |||||||||||||||||||||||||| ||||||| | | ||||||||| || | || Sbjct 2280 TACAAAAGGAGACATCAAAAGCATTATAGATCCAAAATTTAG-TGGAGATTATGA-TGCT 2337 Query 355 GGTTCAGTTTGGAAAGCTGTCGAATTGGCAATGTCGTGTCTGAATCCTTCTTCGA-TAAA 413 ||||| || |||| ||| || ||| | |||||||||||| | ||||||||||| | | | Sbjct 2338 GGTTCTGTCTGGAGAGCAGTTGAACTAGCAATGTCGTGTGTAAATCCTTCTTCAACTGGA 2397 Query 414 TAGACCGACAATGACTCAAGTTGTT-TCTGAACTAAACGAGTGTTTAGCATCAGAAAATT 472 ||||| || ||| |||||||||| || ||| |||| || ||||| ||||||||||| | Sbjct 2398 -AGACCAACCATGTCTCAAGTTGTAATC-GAATTAAATGAATGTTTGGCATCAGAAAACT 2455 Query 473 TGAGGGGAGGACA-GAGTCAAGAGATGGATTCA 504 ||| ||||| | ||||||| | ||||| ||| Sbjct 2456 CAAGGAGAGGA-ATGAGTCAAAACATGGAGTCA 2487 > AT3G46410.1 | Symbols: | Protein kinase superfamily protein | chr3:17079093-17080684 FORWARD LENGTH=876 Length=876 Score = 237 bits (128), Expect = 9e-62 Identities = 372/486 (77%), Gaps = 31/486 (6%) Strand=Plus/Plus Query 1 ATGGTTCATAGGGACGTCAAAACCACAAATATATTGTTGAATGAACACTTTGA-GGCCAA 59 ||||| ||||| || ||||||| ||||||||||||||| | || || ||| | ||||| Sbjct 322 ATGGTACATAGAGATGTCAAAAGTACAAATATATTGTTGGACGATCAATTT-ACTGCCAA 380 Query 60 ACTTGCTGATTTTGGACTTTCGAGGTCATTTCCAA-TTGAAGGCGAGA-CTCATGTGTCA 117 | |||| |||||||| ||||| || || ||||||| | | || || | ||||| | ||| Sbjct 381 AATTGCGGATTTTGGGCTTTCAAGATC-TTTCCAACTCGGAGATGA-ATCTCATATTTCA 438 Query 118 ACAGTTGTTGCTGGTACTATTGGATACCTTGATCCCGAATATTACCGTACAAATAGGTTG 177 |||||||||||||||||| ||||||||||||||| | | | | || | ||||| Sbjct 439 ACAGTTGTTGCTGGTACTCCTGGATACCTTGATCCTG-A-A--A-CG----GGTCGGTTG 489 Query 178 ACAGAAAAGAGTGACGTCTACAGTTTTGGTATTGTAATATTGGAGATAATTACAAACAAA 237 | || | ||| || |||||||| || || ||||| |||||||||| || |||||| || Sbjct 490 GCTGAGATGAGCGATGTCTACAGCTTCGGGATTGTGTTATTGGAGATGATGACAAACCAA 549 Query 238 CCAGTGATTGACCAAAACCGTGAAAAGCGACACATAGCAGAATGGGTAGGACAAATGCTT 297 | ||||||||||||||||||||||||||||||||| |||||||||||| | ||||| Sbjct 550 CGTGTGATTGACCAAAACCGTGAAAAGCGACACATAACAGAATGGGTAGCTTTAGTGCTT 609 Query 298 A-CAAAAGGAGACATCAA-AAGCATTACGGATCC-AAGTCTCCATGGAGATTACGACTCT 354 | || | |||||||| | ||| || | |||||| || ||| | || |||||| |||| Sbjct 610 AACAGA-GGAGACATTACCAAG-ATCATGGATCCTAA-TCTTTACGGCGATTACAACTCA 666 Query 355 GGTTCAGTTTGGAAAGCTGTCGAATTGGCAATGTCGTGT-CTGAATCCTTCTTC-GATAA 412 ||| |||||||||||| | |||||||| ||||| ||| | || || ||||| || || Sbjct 667 AATTCTGTTTGGAAAGCTCTTGAATTGGCTATGTCATGTGCA-AACCCATCTTCCGAAAA 725 Query 413 ATAGACCGA-CAATGACTCAAGTTGTTT-CTGAACTAAACGAGTGT-TTAGCATCAGAAA 469 | |||| | || || | |||||| | | | |||||| |||||| ||| | || |||| Sbjct 726 AC-GACCAAGCA-TGTCCCAAGTTATCAGC-GTACTAAAAGAGTGTCTTA-CTTCTGAAA 781 Query 470 ATTTGA 475 | |||| Sbjct 782 ACTTGA 787 > AT3G46384.1 | Symbols: | pseudogene, receptor-related protein kinase homolog, similar to receptor-like protein kinase homolog; blastp match of 48% identity and 1.1e-26 P-value to GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated receptor-like protein kinase {Phaseolus vulgaris} | chr3:17064271-17065121 FORWARD LENGTH=851 Length=851 Score = 150 bits (81), Expect = 1e-35 Identities = 164/204 (80%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 193 GTCTACAGTTTTGGTATTGTAATATTGGAGATAATTACAAACAAACCAGTGATTGACCAA 252 |||||||| || || ||||| |||||||||| || |||||| ||| |||||||||||| Sbjct 367 GTCTACAGCTTCGGGATTGTGTTATTGGAGATGATGACAAACCAACGTGTGATTGACCAA 426 Query 253 AACCGTGAAAAGCGACACATAGCAGAATGGGTAGGACAAATGCTTA-CAAAAGGAGACAT 311 ||||||||||||||||||||| |||||||||||| | |||||| || | |||||||| Sbjct 427 AACCGTGAAAAGCGACACATAACAGAATGGGTAGCTTTAGTGCTTAACAGA-GGAGACAT 485 Query 312 CAA-AAGCATTACGGATCC-AAGTCTCCATGGAGATTACGACTCTGGTTCAGTTTGGAAA 369 | ||| || | |||||| || ||| | || |||||| |||| ||| ||||||||| Sbjct 486 TACCAAG-ATCATGGATCCTAA-TCTTTACGGCGATTACAACTCAAATTCTGTTTGGAAA 543 Query 370 GCTGTCGAATTGGCAATGTCGTGT 393 ||| | |||||||| ||||| ||| Sbjct 544 GCTCTTGAATTGGCTATGTCATGT 567 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27076205233 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5