BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg914427
Length=2433
Score E
Sequences producing significant alignments: (Bits) Value
AT1G52570.1 | Symbols: PLDALPHA2 | phospholipase D alpha 2 | ch... 4045 0.0
AT3G15730.1 | Symbols: PLDALPHA1, PLD | phospholipase D alpha 1... 2106 0.0
> AT1G52570.1 | Symbols: PLDALPHA2 | phospholipase D alpha 2 |
chr1:19583940-19587050 REVERSE LENGTH=2470
Length=2470
Score = 4045 bits (2190), Expect = 0.0
Identities = 2353/2434 (97%), Gaps = 2/2434 (0%)
Strand=Plus/Plus
Query 1 ATGGAAGAGTTTTTGTTACATGGAAGATTGCACGCGACAATCTATGAAGTTGATCGTCTC 60
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 38 ATGGAAGAGTGTTTGTTACATGGAAGATTGCACGCGACAATCTACGAAGTTGATCATCTC 97
Query 61 CATGCTGAAGGAGGTAGATCAGGTTTCTTAGGATCGATACTAGCAAATGTAGAAGAAACA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 98 CATGCTGAAGGAGGTAGATCAGGTTTCTTAGGATCGATACTAGCAAATGTAGAAGAAACA 157
Query 121 ATTGGTGTTGGCAAAGGAGAAACTCAGCTTTACGCTACAATCGATCTTGAGAAAGCGAGA 180
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 158 ATCGGTGTTGGCAAAGGAGAAACTCAGCTTTACGCTACAATCGATCTTGAGAAAGCAAGA 217
Query 181 GTTGGAAGAACAAGGAAAATAACAAAGGAGCCAAAAAACCCAAAGTGGTTTGAATCTTTT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 218 GTTGGAAGAACGAGGAAAATAACAAAGGAGCCAAAAAACCCAAAGTGGTTTGAGTCTTTT 277
Query 241 CATATTTACTGTGGTCACATGGCTAAACATGTTATTTTCACTGTTAAGGATGCTAATCCG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 CATATTTACTGTGGTCACATGGCTAAACATGTTATTTTCACTGTTAAGGATGCTAATCCG 337
Query 301 ATTGGCGCTACGCTGATCGGAAGAGGTTATATTCCTGTGGAAGATATTTTGCATGGAGAA 360
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 338 ATTGGCGCGACGTTGATCGGAAGAGGTTATATTCCTGTGGAAGATATTTTGCATGGAGAA 397
Query 361 GAAGTTGACAGATGGGTTGATATCTTAGATAATGATAAAAACCCCATTGCTGGAGGATCA 420
|||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 398 GAAGTTGATAGATGGGTTGATATCTTAGATAATGAGAAAAACCCAATTGCTGGAGGATCA 457
Query 421 AAGATCCATGTGAAACTCCAATATTTCGGTGTTGAGAAGGATAAAAACTGGAATCGAGGT 480
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 458 AAGATCCATGTGAAACTCCAATATTTCGGTGTTGAAAAGGATAAAAACTGGAATCGTGGT 517
Query 481 ATCAAAAGTGCTAAGTTTCCAGGAGTTCCTTACACATTCTTCTCTCAGAGAAGAGGCTGC 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 518 ATCAAAAGTGCTAAGTTTCCAGGAGTTCCTTACACATTCTTCTCTCAGAGGAGAGGCTGC 577
Query 541 AAAGTTTCTCTGTATCAAGATGCTCATATTCCTGGAAACTTTGTCCCAAAAATCCCTCTC 600
||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 578 AAAGTTTCTTTGTATCAAGATGCTCATATCCCTGGAAACTTTGTCCCGAAAATCCCTCTT 637
Query 601 GCGGGTGGAAAAAACTACGAGCCAGGTCGATGTTGGGAGGATATTTTCGATGCCATTACT 660
||||| || ||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 638 GCGGGAGGGAAAAACTACGAGCCACATCGATGTTGGGAGGATATTTTCGATGCAATTACT 697
Query 661 AATGCAAAACACTTGATTTACATTACTGGTTGGTCTGTTTACACTGAGATTTCTTTAGTG 720
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 698 AATGCTAAACACTTGATTTACATTACTGGTTGGTCTGTTTACACTGAGATTTCTTTAGTG 757
Query 721 AGGGACTCGAGGAGGCCAAAACAAGGAGGAGATGTGACCATTGGTGAGCTACTCAAGAAA 780
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 758 AGGGACTCGAGGAGGCCAAAACAAGGAGGAGATGTGACTGTTGGTGAGCTACTCAAGAAG 817
Query 781 AAAGCTAGTGAAGGTGTTAAGGTAATTTTGCTTGTTTGGGATGACAGAACGTCTGTTGAT 840
||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||
Sbjct 818 AAAGCTAGTGAAGGTGTTAAGGTTATTTTGCTTGTTTGGGATGACAGAACATCAGTTGAT 877
Query 841 TTGCTGAAAAAAGATGGACTTATGGCCACTCATGATGAAGAAACTGAGAATTTTTTCAGA 900
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 878 TTGCTGAAAAAAGATGGACTTATGGCTACTCATGATGAGGAAACTGAGAATTTTTTCAGA 937
Query 901 GGAACCGACGTGAACTGTATTTTGTGTCCTCGTAACCCTGATGATGGTGGAAGCATTGTC 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 GGAACCGACGTGAACTGTATTTTGTGTCCTCGTAACCCTGATGATGGTGGAAGCATTGTC 997
Query 961 CAAAACTTGCAAATCTCAACTATGTTCACTCATCACCAAAAGATTGTTGTTGTAGACAGT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 CAAAACTTGCAAATCTCAACTATGTTCACTCATCACCAAAAGATTGTTGTTGTAGACAGT 1057
Query 1021 GAAATGCCAAGTGGAGGATCAAGATCAAGAAGAATTGTGAGTTTTGTTGGTGGTCTTGAT 1080
|||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1058 GAAATGCCGAGTGGAGGATCAAGATCCAGAAGAATAGTGAGTTTTGTTGGTGGTCTTGAT 1117
Query 1081 CTTTGTGATGGAAGATATGACACTCCATTTCACTCCTTGTTTAGAACATTGGACACTGCC 1140
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1118 CTTTGTGATGGAAGATATGACACTCCGTTTCACTCCTTGTTTAGAACGTTGGACACTGCC 1177
Query 1141 CATCACGATGACTTCCATCAACCGAATTTCACTGGCGCTGCGATAACCAAAGGCGGTCCT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1178 CATCACGATGACTTCCATCAACCGAATTTCACTGGCGCTGCGATAACCAAAGGTGGTCCT 1237
Query 1201 AGAGAGCCATGGCATGACATTCATTGTCGTCTTGAAGGACCTATTGCTTGGGATGTCTTG 1260
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238 AGAGAGCCATGGCATGATATTCATTGTCGTCTTGAAGGACCTATTGCTTGGGATGTCTTG 1297
Query 1261 TATAATTTTGAGCAGAGATGGAGTAGACAAGGTGGTAAAGATATTTTGGTTAAAATAAGA 1320
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1298 TATAATTTTGAGCAGAGATGGAGTAGACAAGGCGGTAAAGATATTTTGGTTAAAATGAGA 1357
Query 1321 GATCTAGGTGATATTATCATCCCGCCTTCTCCTGTTTTGTTCTCGGAGGATCACGATGTG 1380
|| || || ||||||||||||||||||||||| ||| ||||||| |||||||| || |||
Sbjct 1358 GAACTCGGAGATATTATCATCCCGCCTTCTCCCGTTCTGTTCTCAGAGGATCATGACGTG 1417
Query 1381 TGGAATGTTCAGTTGTTTAGATCCATTGATGGTGGAGCAGCTGCTGGATTTCCTGACTCA 1440
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1418 TGGAATGTTCAGTTGTTTAGATCCATTGATGGTGGAGCAGCTGCTGGATTTCCTGACTCC 1477
Query 1441 CCTGAAGCTGCAGCGGAAGCAGGTCTTGTGAGCGGAAAAGATAATATAATTGATAGGAGT 1500
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1478 CCTGAAGCTGCAGCGGAAGCAGGTCTTGTGAGTGGAAAAGATAATATAATTGATAGGAGT 1537
Query 1501 ATTCAAGATGCTTACATTCACGCGATTAGACGAGCTAAAGATTTCATCTATATCGAAAAC 1560
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1538 ATTCAAGATGCTTACATTCACGCGATTAGACGAGCTAAAGACTTCATCTATATCGAAAAC 1597
Query 1561 CAGTACTTCCTTGGAAGCTCTTTTGCTTGGAGCGCTGATGGAATCAAACCAGAGGAAATC 1620
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1598 CAGTACTTCCTTGGAAGCTCTTTTGCTTGGAGCGCGGATGGAATCAAACCAGAGGAAATC 1657
Query 1621 AATGCTCTGCATTTGATTCCAAAGGAGCTATCTTTGAAGATTGTTAGCAAGATCAAAGCA 1680
|||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1658 AATGCTCTGCATCTGATTCCGAAGGAGCTATCTTTGAAGATTGTTAGCAAAATCAAAGCA 1717
Query 1681 GGGGAGAAGTTTAAGGTCTATGTTGTTGTTCCAATGTGGCCTGAAGGCATTCCTGAGAGT 1740
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1718 GGAGAGAAGTTTAAGGTCTATGTTGTTGTTCCAATGTGGCCTGAAGGGATTCCTGAGAGT 1777
Query 1741 GGATCAGTCCAAGCTATATTGGATTGGCAGAAAAGAACAATGGAGATGATGTACAAAGAT 1800
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1778 GGATCAGTCCAAGCTATATTAGATTGGCAGAAAAGAACAATGGAGATGATGTACAAAGAT 1837
Query 1801 GTAATCAAGGCACTTAGAGAAACGGGACTCGAGGGAGAGGATCCGCGAGATTATCTAACA 1860
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct 1838 GTAATCAAGGCACTTAGAGAAAATGGACTTGAGGGAGAGGATCCGCGAGATTATCTGACA 1897
Query 1861 TTCTTCTGCCTCGGAAACCGAGAAGTCAAGAAGGATGGAGAGTATGAGCCTTCAGAGAAA 1920
|||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1898 TTCTTCTGCCTCGGTAACCGAGAGGTCAAGAAAGATGGAGAGTATGAGCCTTCAGAGAAA 1957
Query 1921 CCTGAACCGGACACTGACTATATCCGAGCACAAGAAGCACGCCGCTTCATGATCTATGTT 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1958 CCTGAACCGGACACTGACTATATCCGAGCACAAGAAGCACGCCGCTTCATGATCTATGTT 2017
Query 1981 CACACTAAAATGATGATAGTTGACGATGAGTACATTATAATCGGATCAGCAAATATCAAC 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2018 CACACTAAAATGATGATAGTTGACGATGAGTACATTATAATCGGATCAGCAAATATCAAC 2077
Query 2041 CAGAGGTCAATGGATGGTGCAAGAGACTCAGAGATAGCGATGGGAGGCTATCAACCATAT 2100
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2078 CAGAGGTCAATGGATGGTGCAAGAGACTCAGAGATAGCAATGGGAGGCTATCAACCATAT 2137
Query 2101 CATCTATCCACAAGACAACCAGCTCGAGGTCAAATCCATGGATTCCGCATGTCGTTGTGG 2160
||||| || |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 2138 CATCTCTCAACAAGACAACCAGCTCGAGGTCAAATCCATGGATTCCGCATGTCTTTATGG 2197
Query 2161 TATGAACATTTAGGAATGCTCGATGAAACATTCCTCGATCCATCGAGCCAAGAATGTATC 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2198 TATGAACATTTAGGAATGCTCGATGAAACATTCCTCGATCCATCGAGCCAAGAATGTATC 2257
Query 2221 CAAAAAGTTAACCGTGTTGCTGATAAGTATTGGGATCTTTACTCAAGTGAGTCACTTGAA 2280
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2258 CAGAAAGTCAACCGTGTTGCTGATAAGTATTGGGATCTTTACTCAAGTGAGTCACTTGAA 2317
Query 2281 CATGATCTTCCCGGTCATCTACTTCGCTACCCGATCGGTATTGCTAGTGAAGGGAACATC 2340
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2318 CATGATCTTCCTGGTCATCTACTTCGCTACCCGATCGGTATTGCTAGTGAAGGGAACATC 2377
Query 2341 ACTGAGCTTCCCAGATGTGAATTCTTTCCCGACACAAAAGCCCGTATCCTTGGTG-CTAA 2399
|||||||||||| |||||||||||||||||||||||||||| |||||||| |||| | ||
Sbjct 2378 ACTGAGCTTCCCGGATGTGAATTCTTTCCCGACACAAAAGCTCGTATCCTCGGTGTC-AA 2436
Query 2400 ATCTGATTACATGCCTCCCATTCTTACAACCTAA 2433
|||||||||||||||||| |||||||||||||||
Sbjct 2437 ATCTGATTACATGCCTCCAATTCTTACAACCTAA 2470
> AT3G15730.1 | Symbols: PLDALPHA1, PLD | phospholipase D alpha
1 | chr3:5330322-5333745 FORWARD LENGTH=2810
Length=2810
Score = 2106 bits (1140), Expect = 0.0
Identities = 2013/2431 (83%), Gaps = 74/2431 (3%)
Strand=Plus/Plus
Query 40 ATCTATGAAGTTGATCG-TCTCCATGCTGAAGGAGGTAGATC-AGG-TTTCTTAGG-ATC 95
||||||||||||||| | ||||||| || || | ||| | ||| || ||| || |
Sbjct 146 ATCTATGAAGTTGAT-GCCCTCCATGGTGGTGGTGTTAG-GCAAGGCTTCCTT-GGCA-A 201
Query 96 GATACTAGCAAATGTAGAAGAAACAATTGGTGTTGGCAAAGGAGAAACTCAGCTT-TACG 154
||| || |||||||||||||| || ||||||||||| ||||||||||| ||| || || |
Sbjct 202 GATTCTGGCAAATGTAGAAGAGACGATTGGTGTTGGTAAAGGAGAAACACAG-TTGTATG 260
Query 155 CTACAATCGATCTTG-AGAAAGCGAGAGTTGGAAGAACAAGGAAAAT-AACAAAGGAGCC 212
| || || |||| || | ||||| |||||||| ||||| ||||| || || ||| || ||
Sbjct 261 CGACGATTGATC-TGCAAAAAGCTAGAGTTGGGAGAACCAGGAAGATCAA-AAATGAACC 318
Query 213 AAAAAACCCAAAGTGGTTTGAATCTTTTCATATTTACTGTGGTCACATGGCTAAACATGT 272
|| ||||||||||||| ||| || |||||||||||||||| |||| ||||| || |
Sbjct 319 TAAGAACCCAAAGTGGTATGAGTCGTTTCATATTTACTGTGCTCACTTGGCTTCTGATAT 378
Query 273 TATTTTCACTGTTAAGGATGCTAATCCGATTGGCGCTACGCTGATCGGAAGAGGTTATAT 332
|| ||||||||||| |||| |||||| ||||| ||||| || |||||||||| ||| ||
Sbjct 379 CATCTTCACTGTTAAAGATGATAATCCCATTGGAGCTACCCTTATCGGAAGAGCTTACAT 438
Query 333 TCCTGTGGAAGATA-T-TTTGCATGGAGAAGAAGTTGA-CAGATGGGTTGATATCTTAGA 389
|||||| || | | | || | || || ||||| || ||| |||||||| ||||| ||
Sbjct 439 TCCTGTTGATCA-AGTCATT-AACGGCGAGGAAGTGGATCAG-TGGGTTGAGATCTTGGA 495
Query 390 TAATGATAAAAACCCCATTGC-TGGAGGATCAAAGATCCATGTGAAACTCCAATATTTCG 448
|||||| | |||||| ||| | |||||||||||||| ||||| || || |||||||||
Sbjct 496 TAATGACAGAAACCCTATT-CAGGGAGGATCAAAGATTCATGTCAAGCTTCAATATTTCC 554
Query 449 GTGTTGAGAAGGATAAAAACTGG-A-ATCGAGGTATCAAAAGTGCTAAGTTTCCAGGAGT 506
||||||| ||||| |||||| | || | |||||||||||||| ||||| || |||||
Sbjct 555 ATGTTGAGGAGGATCGTAACTGGAACAT-G-GGTATCAAAAGTGCCAAGTTCCCTGGAGT 612
Query 507 TCCTTACACATTCTTCTCTCAGAGA-AGAGGCTGCAAAGTTTCTCTGTATCAAGATGCTC 565
|| |||||||||||||| |||||| | ||||||||||||||||||||| ||||||||||
Sbjct 613 GCCATACACATTCTTCTCGCAGAGACA-AGGCTGCAAAGTTTCTCTGTACCAAGATGCTC 671
Query 566 ATATTCCTGGA-AACTTTGTCCCAAAAATCCCTCTCGCGGGTGGAAAAAACTACGAGCCA 624
||||||| || ||||||||||| | ||| |||||||| || || || ||||| |||||
Sbjct 672 ATATTCC-AGACAACTTTGTCCCTAGAATTCCTCTCGCTGGAGGGAAGAACTATGAGCCT 730
Query 625 GGTCGATGTTGGGAGGATATTTTCGATGCCATTA-CTAATGCAAAACACTTGATTTACAT 683
||||||||||||||||||| ||||| |||| | ||||||||||||||||| |||||
Sbjct 731 CAAAGATGTTGGGAGGATATTTTTGATGCTATTAGC-AATGCAAAACACTTGATCTACAT 789
Query 684 TACTGGTTGGTCTGTTTACACTGAGATTTCTTTAGTGAGGGACTCGAGGAGGCCAAAACA 743
||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || |
Sbjct 790 TACTGGTTGGTCTGTTTACGCTGAGATTGCTTTAGTGAGGGACTCGAGGAGGCCTAAGCC 849
Query 744 AGGAGGAGATGTGACCATTGGTGAGCTACTCAAGAAAAAAGCTAGTGAAGGTGTTAAGGT 803
||||| ||||||||||||||||||||||||||||| || |||||||||||||| | |||
Sbjct 850 TGGAGGTGATGTGACCATTGGTGAGCTACTCAAGAAGAAGGCTAGTGAAGGTGTCAGGGT 909
Query 804 AATTTTGCTTGTTTGGGATGACAGAACGTCTGTTGATTTGCTGAAAAAAGATGGACTTAT 863
||||||||||||||||||||||||| ||||||||| ||||||| |||||||| || ||
Sbjct 910 TCTTTTGCTTGTTTGGGATGACAGAACTTCTGTTGATGTGCTGAAGAAAGATGGGCTCAT 969
Query 864 GGCCACTCATGATGAAGAAACTGAGAATTTTTTCAGAGGAACCGACGTGAACTGTATTTT 923
||| |||||||||||||| || |||||||| ||||| |||| || || | |||||| |
Sbjct 970 GGCTACTCATGATGAAGAGACCGAGAATTTCTTCAGGGGAAGTGATGTCCATTGTATTCT 1029
Query 924 GTGTCCTCGTAACCCTGATGATGGTGGAAGCATTGTCCAAAACTTGCAAATCTCAACTAT 983
||| ||||||||||| ||||| ||||| ||||| ||||||| ||||| ||||| |||||
Sbjct 1030 GTGCCCTCGTAACCCGGATGACGGTGGTAGCATAGTCCAAAGTTTGCAGATCTCTACTAT 1089
Query 984 GTTCACTCATCACCA-AAAGATTGTTGTTGTAGACAGTGAAATGCCAAGT-G-G-AGGAT 1039
|||||| ||||| || ||| || |||||||| ||||| || |||||||| | | |||||
Sbjct 1090 GTTCACGCATCATCAGAAA-ATCGTTGTTGTGGACAGCGAGATGCCAAGCAGAGGAGGAT 1148
Query 1040 CA-AGATCAAGAAGAATTGTGAGTTTTGTTGGTGGTCTTGATCTTTGTGATGGAAGATAT 1098
|| | || | || ||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 1149 CAGAAATGAGGA-GAATTGTGAGTTTTGTTGGCGGTATTGATCTTTGTGATGGAAGATAC 1207
Query 1099 GACACTCCATTTCACTCCTTGTTTAGAACATTGGACACTGCCCATCACGATGACTTCCAT 1158
|||||||| || ||||||||||| || ||||||||||| | ||| || ||||||||||||
Sbjct 1208 GACACTCCGTTCCACTCCTTGTTCAGGACATTGGACACAGTCCACCATGATGACTTCCAT 1267
Query 1159 CAACCGAATTTCACTGGCGCTGCGATAACCAAAGGCGGTCCTAGAGAGCCATGGCATGAC 1218
||||| || |||||||| ||||| || || ||||| ||||| || ||||| |||||||||
Sbjct 1268 CAACCTAACTTCACTGGTGCTGCTATCACTAAAGGTGGTCCAAGGGAGCCTTGGCATGAC 1327
Query 1219 ATTCATTGTCGTCTTGAAGGACCTATTGCTTGGGATGTCTTGTATAATTTTGAGCAGAGA 1278
||||| | ||||||||||| || ||||||||||||||| |||| || || |||||||||
Sbjct 1328 ATTCACTCCCGTCTTGAAGGTCCAATTGCTTGGGATGTCATGTACAACTTCGAGCAGAGA 1387
Query 1279 TGGAGTA-GACAAGGTGGTAAAGATATTTTGGTTAAAATAAGAGATCT-AGGTGATATTA 1336
||||| | | || ||||||||||| ||| ||||||| | |||||||| || ||||||||
Sbjct 1388 TGGAGCAAG-CAGGGTGGTAAAGACATTCTGGTTAAGTTGAGAGATCTTAG-TGATATTA 1445
Query 1337 TCATC-CCGCCTTCTCCTGTTTTGTTCTCG-GAGGATCACGATGTGTGGAATGTTCAGTT 1394
| ||| || |||||||||||| ||||| | ||||| ||||||||||||||||| || ||
Sbjct 1446 TTATCACC-CCTTCTCCTGTTATGTTC-CAAGAGGACCACGATGTGTGGAATGTCCAATT 1503
Query 1395 GTTTAGATCCATTGATGGTGGAGCAGCTGCTGGATTTCCTGACTCACCTGAAGCTGCAGC 1454
|||||| ||||||||||| ||||| |||||||| ||||| || || ||||||||||| ||
Sbjct 1504 GTTTAGGTCCATTGATGGAGGAGCTGCTGCTGGGTTTCCCGAGTCGCCTGAAGCTGCTGC 1563
Query 1455 GGAAGCAGGTCTTGTGAGCGGAAAAGATAATATAATTGATAGGAGTATTCAAGATGCTTA 1514
|||||| || ||||| || || |||||||| || |||||||||||||| |||||||||||
Sbjct 1564 GGAAGCCGGGCTTGTAAGTGGGAAAGATAACATCATTGATAGGAGTATCCAAGATGCTTA 1623
Query 1515 CATTCACGCGATTAGACGAGCTAAAGATTTCATCTATATCGAAAACCAGTACTTCCTTGG 1574
|||||| || || ||||| ||||| ||||||||||| | ||||||||||||||||||||
Sbjct 1624 CATTCATGCAATCAGACGTGCTAAGGATTTCATCTACGTTGAAAACCAGTACTTCCTTGG 1683
Query 1575 AAGCTCTTTTGCTTGGAGC-GCTGATGGAATCAAACCAGAGGAAATCAATGCTCTGCATT 1633
|| |||||||||||| || || ||||| || | || ||||| |||||||| ||||| |
Sbjct 1684 GAGTTCTTTTGCTTGG-GCAGCCGATGGTATTACTCCTGAGGACATCAATGCCCTGCACT 1742
Query 1634 TGATTCCAAAGGAGCTATCTTTGAAGATTGTTAGCAAGATCAAAGCAGGG-GAGAAGTTT 1692
| || ||||| ||| | || ||||||| ||||||||||| | | | || ||||||||
Sbjct 1743 TAATCCCAAAAGAGTTGTCGCTGAAGATAGTTAGCAAGATTGA-GAAAGGAGAGAAGTTC 1801
Query 1693 AAGGTCTATGTTGTTGTTCCAATGTGGCCTGAAGG-CATTCCTGAGAGTGGATCAGTCCA 1751
| |||||||||||| |||||||||||||| ||||| | | || |||||||||||||| ||
Sbjct 1802 AGGGTCTATGTTGTGGTTCCAATGTGGCCAGAAGGTC-TCCCAGAGAGTGGATCAGTGCA 1860
Query 1752 AGCTATATTGGATTGGCAGAAAAGAACAATGGAGATGATGTACAAAGATGTAAT-CAAGG 1810
||||||||| || ||||||| || || ||||||||||||||||| ||||| || || ||
Sbjct 1861 AGCTATATTAGACTGGCAGAGGAGGACCATGGAGATGATGTACAAGGATGTGATTCA-GG 1919
Query 1811 CACTTAGAGAA-ACGGGACTCGAGGGAGAGGATCCGCGAGATTATCTAACATTCTTCTGC 1869
| || || | | ||| || |||| | || |||| || | ||||| |||||||||||
Sbjct 1920 CTCTCAGGGCCCA-GGGTCTTGAGG-A-AG-ATCCAAGAAACTATCTGACATTCTTCTGT 1975
Query 1870 CTCGGAAACCGAGAAGTCAAGAAGGATGGAGAGTATGAGCCTTCAGAGAAACCTGAACCG 1929
|| |||||||| || |||||||| |||||||||||||||||| | |||||||| || ||
Sbjct 1976 CTTGGAAACCGTGAGGTCAAGAAAGATGGAGAGTATGAGCCTGCTGAGAAACCAGACCCC 2035
Query 1930 GACACTGACTATATCCGAGCACAAGAAGCACGCCGCTTCATGATCTATGTTCACACTAAA 1989
|||||||| || || | || |||||||||||||| |||||||| || || ||||| |||
Sbjct 2036 GACACTGATTACATGAGGGCGCAAGAAGCACGCCGTTTCATGATTTACGTCCACACCAAA 2095
Query 1990 ATGATGATAGTTGACGATGAGTACATTATAATCGGATCAGCAAATATCAACCAGAGGTCA 2049
|||||||| ||||||||||| |||||||| || || || || || |||||||||||||||
Sbjct 2096 ATGATGATCGTTGACGATGAATACATTATCATTGGGTCTGCTAACATCAACCAGAGGTCA 2155
Query 2050 ATGGATGGTGCAAGAGACTCAGAGATAGCGATGGGAGGCTATCAACCATATCATCTA-TC 2108
||||| |||||||||||||| |||||||| |||||||| ||||||||| |||| || ||
Sbjct 2156 ATGGACGGTGCAAGAGACTCTGAGATAGCAATGGGAGGTTATCAACCACATCA-CTTGTC 2214
Query 2109 CACA-AGACAACCAGCTCGAGGTCAAATCCATGGATTCCGCATGTCGTTGTGGTATGAAC 2167
| || |||||||||||||| || || |||||||| || || ||||| | ||||| ||||
Sbjct 2215 C-CATAGACAACCAGCTCGTGGCCAGATCCATGGGTTTCGTATGTCACTCTGGTACGAAC 2273
Query 2168 ATTTAGGAATGCTCGATGAAACATTCCTCGATCCATCGAGCCAAGAATGTATCCAAAAAG 2227
| | ||||||||||||||||| |||||||||||||| ||| ||||| || | ||||
Sbjct 2274 ACCTGGGAATGCTCGATGAAACCTTCCTCGATCCATCAAGCTTGGAATGCATTGAGAAAG 2333
Query 2228 TTAACCGTGTTGCTGATAAGTATTGGGATCTTT-ACTCAAGTGAGTCACTTGAACATGAT 2286
||||||| || |||| ||||||||||| |||| |||||||||||||||| ||||||||
Sbjct 2334 TTAACCGCATTTCTGACAAGTATTGGGA-CTTTTACTCAAGTGAGTCACTCGAACATGAC 2392
Query 2287 CTTCCCGGTCATCTA-CTTCGCTACCCGATCGGTATTGCTAGTGAAGG-GAACATCACTG 2344
||||| ||||| || || ||||||||||||||| | || || ||||| || ||||||||
Sbjct 2393 CTTCCTGGTCA-CTTGCTCCGCTACCCGATCGGTGTAGCCAGCGAAGGCGA-CATCACTG 2450
Query 2345 AGCTTCCCAG-ATGTGAATTCTTTCCCG-ACACAAAAGCCCGTATCCTTGGTGCTAAATC 2402
||||||| || || ||||||||| |||| ||||||| ||||||||||| || | |||||
Sbjct 2451 AGCTTCC-AGGATTTGAATTCTT-CCCGGACACAAAGGCCCGTATCCTCGGCACCAAATC 2508
Query 2403 TGATTACATGCCTCCCATTCTTACAACCTAA 2433
|| ||| ||||||| || ||||||||||||
Sbjct 2509 AGACTACCTGCCTCCAATCCTTACAACCTAA 2539
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120832711815
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5