BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg914444 Length=387 Score E Sequences producing significant alignments: (Bits) Value AT1G16310.1 | Symbols: | Cation efflux family protein | chr1:5... 322 2e-87 > AT1G16310.1 | Symbols: | Cation efflux family protein | chr1:5578431-5580693 FORWARD LENGTH=1399 Length=1399 Score = 322 bits (174), Expect = 2e-87 Identities = 200/213 (94%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 65 GAAAGGAACGTAGAGTCTCTGAATACTACAAGAAGCAAGAGAGGCTCCTCGAGGGTTTCA 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 279 GAAAGGAACGTAGAGTCTCTGAATACTACAAGAAGCAAGAGAGGCTCCTCGAGGGTTTCA 338 Query 125 ATGAGATGGAGACTATAAATGAAACTTGTTTTGCATCTGGTGTTCCAACTAAGGAAGAAA 184 |||||||||||||||| | |||| | ||||||||||||||||||||||| ||||||||| Sbjct 339 ATGAGATGGAGACTATCCACGAAAATGGTTTTGCATCTGGTGTTCCAACTGAGGAAGAAA 398 Query 185 TAAAGAAGCTTGCAAAGAGTGAGAGACTGGCAGTTCACATATCAAACGCAACAAATTTGG 244 | |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||| Sbjct 399 TGAAGAAGCTTGCAAAGAGTGAGAGACTTGCGGTTCACATATCGAACGCAACAAATTTGG 458 Query 245 TGCTTTTTGTGGCAAAGGTTTATGCCTCCATGG 277 |||||||||| ||||| ||||||||||| |||| Sbjct 459 TGCTTTTTGTAGCAAAAGTTTATGCCTCTATGG 491 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18247192887 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5