BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg914699
Length=1326
Score E
Sequences producing significant alignments: (Bits) Value
AT1G55730.1 | Symbols: ATCAX5, CAX5 | cation exchanger 5 | chr1... 2111 0.0
AT1G55720.1 | Symbols: ATCAX6, CAX6 | cation exchanger 6 | chr1... 1687 0.0
AT3G13320.1 | Symbols: CAX2, atcax2 | cation exchanger 2 | chr3... 1424 0.0
> AT1G55730.1 | Symbols: ATCAX5, CAX5 | cation exchanger 5 | chr1:20831052-20834519
REVERSE LENGTH=1933
Length=1933
Score = 2111 bits (1143), Expect = 0.0
Identities = 1266/1327 (95%), Gaps = 2/1327 (0%)
Strand=Plus/Plus
Query 1 ATGGGTTGTTGTAAGGTGCCAGCTCTTATTCAGGCGCAGGTAGAAATGGGGTTGGTTAAT 60
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 273 ATGGGTTGTTGTAAAGTGCCAGCTCTTATTCAGGCCCAGGTAGAAATGGGGTTGGTTAAT 332
Query 61 GATGTTGAGCACAAAAGCCTTTTTAGACGAGATACAGATTCCCCACAAAGAAAAGCAGCT 120
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 333 GATGTTGAGCACAAAAGCCTTTTTAGACGAGATACTGATTCCCCAGAAAGAAAAGCAGCT 392
Query 121 TCCTTGATGGAACAAGGATCACTTTCTGCAAGTTTTCGAGAACGCGCAACTAAAACACCT 180
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 393 TCCTTGATGGAACAAGGATCACTTTCTGCAAGTTTTCGAGAATGCTCAACTAAAACACCT 452
Query 181 -ATGAACAGTGTGCTACAGAGCTTCAAGATCGTGATTTTATCGAATAAACTCAATCTTTT 239
|| ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 453 AAT-AACAGTGTGCTCCAGAGCTTCAAGATTGTGATTTTATCGAATAAACTTAATCTTTT 511
Query 240 GTTGCCTTTTGGTCCTCTAGCAATACTACTCCACTACTTGACTGATAATAAGGGATGGAT 299
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 512 GTTGCCTTTTGGTCCTCTGGCAATACTACTCCATTACTTGACAGATAATAAGGGATGGAT 571
Query 300 CTTCTTACTGAGCTTAGTAGGCATCACACCATTAGCTGAACGTCTCGGATATGCCACAGA 359
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 572 CTTCTTATTGAGCTTAGTAGGCATCACACCATTAGCTGAACGTCTCGGATATGCCACCGA 631
Query 360 GCAATTGGCTTGTTACACGGGTCCAACTGTTGGAGGCCTCCTAAATGCTACATTTGGAAA 419
|||||| ||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||
Sbjct 632 GCAATTAGCTTGTTACACTGGTTCAACTGTTGGAGGTCTCCTAAACGCTACATTTGGAAA 691
Query 420 CGTGACAGAGCTGATCATATCGATTTTCGCTCTTAAAAATGGAATGATACGCGTTGTACA 479
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 692 CGTGACAGAGCTGATCATATCGATTTTCGCTCTTAAAAGTGGAATGATACGTGTTGTACA 751
Query 480 GCTGACACTGCTCGGCTCGATTCTTTCTAACATGTTGCTTGTACTTGGCTGCGCCttttt 539
||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct 752 GCTGACATTGCTCGGCTCGATACTTTCTAACATGTTACTTGTACTTGGCTGCGCCTTCTT 811
Query 540 ttGTGGTGGGCTTGTATTTTCCCAGAAAGAGCAAGTCTTTGACAAAGGAAATGCCGTTGT 599
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 812 TTGTGGCGGGCTTGTATTTTCCCAGAAAGAGCAAGTCTTTGACAAAGGTAATGCTGTTGT 871
Query 600 GAATTCGGGATTGCTTTTGATGGCTGTCATGGGGCTACTCTTCCCTGCAGTTCTTCATTA 659
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 872 GAATTCGGGATTGCTTTTGATGGCTGTCATGGGACTACTCTTCCCCGCAGTTCTTCATTA 931
Query 660 CACGCACAGTGAGGTTCATGCTGGCTCATCAGAGCTTGCTCTCTCAAGGTTCAGCAGTTG 719
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 932 CACGCACAGTGAGGTTCATGCTGGGTCATCAGAGCTTGCTCTCTCAAGATTCAGCAGTTG 991
Query 720 CATAATGCTCGTTGCCTATGCTGCTTACCTCTTTTTCCAGTTAAAGAGCCAGCCGAGTTC 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 992 CATAATGCTCGTTGCCTATGCTGCTTACCTCTTTTTCCAGTTAAAGAGCCAGCCGAGCTC 1051
Query 780 TTATACCCCTCTTACCGAGGAAACAAACCAGAATGAAGAAGCTTCAGACGATGATGAAGA 839
|||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||||
Sbjct 1052 TTATACCCCTCTCACCGAGGAAACTAACCAGAACGAAGAAACTTCAGACGATGATGAAGA 1111
Query 840 TCCTGAGATCTCCAAGTGGGAAGCTATCATCTGGCTTTCAATCTTGACGGCTTGGGTCTC 899
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1112 TCCTGAGATCTCCAAGTGGGAAGCTATTATCTGGCTTTCAATCTTGACGGCTTGGGTCTC 1171
Query 900 TCTTCTTTCCGGCTATCTTGTCGATGCCATTGAGGGTGCTTCGGTCTCATGGAAGATACC 959
||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 1172 TCTTCTTTCCGGCTATCTTGTTGATGCCATAGAGGGTGCTTCAGTCTCATGGAAGATACC 1231
Query 960 AATCTCTTTTATCAGTGTAATCTTGCTTCCTATAGTTGGGAATGCGGCTGAGCATGCAGG 1019
|||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1232 AATCTCTTTTATCAGTGTCATCTTACTTCCTATAGTTGGGAATGCGGCCGAGCATGCAGG 1291
Query 1020 TGCCATTATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTGGGAGTGGCTATTGGATC 1079
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292 TGCCATCATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTGGGAGTGGCTATTGGATC 1351
Query 1080 CTCAATTCAGATTTCTATGTTTGCGGTTCCTTTCTGTGTGGTGATCGGATGGATGATGGG 1139
||| ||||||||||||||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct 1352 CTCCATTCAGATTTCTATGTTCGCGGTTCCTTTTTGCGTGGTTATCGGATGGATGATGGG 1411
Query 1140 TGCACAAATGGACCTAAATTTCCAGCTATTTGAGACAGCTGCACTGTTTATAACTGTTAT 1199
||| |||||||||||||||||||||||||||||||| ||| | ||||| |||||||||||
Sbjct 1412 TGCCCAAATGGACCTAAATTTCCAGCTATTTGAGACGGCTACTCTGTTCATAACTGTTAT 1471
Query 1200 TGTTGTAGCTTTCTTTCTCCAGGAAGGGACATCGAATTACTTCAAAGGATTGATGCTCAT 1259
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1472 TGTTGTAGCTTTCTTTCTCCAGGAAGGAACATCGAATTACTTCAAAGGATTGATGCTCAT 1531
Query 1260 TCTTTGTTACTTGATAGTCGCTGCTAGTTTCTTTGTACACGAAGATCCTCATCAAGATGA 1319
|||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1532 TCTTTGCTATTTGATAGTCGCCGCTAGTTTCTTTGTACACGAAGATCCTCATCAAGATGA 1591
Query 1320 TATATAA 1326
|||||||
Sbjct 1592 TATATAA 1598
> AT1G55720.1 | Symbols: ATCAX6, CAX6 | cation exchanger 6 | chr1:20828118-20830640
REVERSE LENGTH=1449
Length=1449
Score = 1687 bits (913), Expect = 0.0
Identities = 1189/1317 (90%), Gaps = 40/1317 (3%)
Strand=Plus/Plus
Query 10 TGTAAGGTGCCAGCTCTTATTCAGGCGCAGGTAGAAATGGGG-TTGGTTAATGATGTTGA 68
||||||||||||||| |||| |||||| |||||||||||||| || |||||||| |||||
Sbjct 100 TGTAAGGTGCCAGCTTTTATGCAGGCGAAGGTAGAAATGGGGCTT-GTTAATGAAGTTGA 158
Query 69 GCACAAAAGCCTTTTTAG-ACGAGATACAGATTCCCCACAAAGAAAAGCAGCTTCCTTGA 127
|| ||||||| |||| | || ||| |||||||||||||||| ||| |||||||| ||||
Sbjct 159 GCTTAAAAGCC-TTTTGGAACAAGAAACAGATTCCCCACAAACAAATGCAGCTTCTTTGA 217
Query 128 TGGAACAAGGATCACTTTCTGCAAGTTTTCGAGAACGC-GCAACTAAAACACCTATGAAC 186
|||| ||||||||| | ||||||||||| | | ||||| | |||| ||||
Sbjct 218 TGGAGCAAGGATCA-------C-----TTCGAGAACGCAG-AGCTAAAGCGCCTAGGAAC 264
Query 187 AGTGTGCTACAGAGCTTCAAGATCGTGATTTTATCGAATAAACTCAATCTTTTGTTGCCT 246
|||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 265 AGTGTGGTCCAGAGCTTCAAGATCGTCATTTTATCGAATAAACTAAATCTTTTGTTGCCT 324
Query 247 TTTGGTCCTCTAGCAATACTACTCCACTACTTGACTGATAATAAGGGATGGATCTTCTTA 306
|| |||||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||
Sbjct 325 TTCGGTCCTCTAGCAATACTAGTCCACTACTTGACAGATAATAAGGGGTGGTTCTTCTTA 384
Query 307 CTGAGCTTAGTAGGCATCACACCATTAGCTGAACGTCTCGGATATGCCACAGAGCAATTG 366
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 385 CTAAGCTTAGTAGGTATCACACCATTAGCTGAACGTCTCGGATATGCCACAGAGCAATTG 444
Query 367 GCTTGTTACACGGGTC-CAACTGTTGGAGGCCTCCTAAATGCTACATTTGGAAACGTGAC 425
|||| ||||| || | ||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 445 TCTTGCTACACAGG-CGCAACTGTTGGAGGTCTCCTCAATGCTACATTTGGAAACGTGAT 503
Query 426 AGAGCTGATCATATCGATTTTCGCTCTTAAAAATGGAATGATACGCGTTGTACAGCTGAC 485
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 504 TGAGCTGATCATATCGATTATCGCTCTTAAAAATGGAATGATACGCGTTGTACAGTTGAC 563
Query 486 ACTGCTCGGCTCGATTCTTTCTAACATGTTGCTTGTACTTGGCTGCGCCtttttt-tGTG 544
||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||
Sbjct 564 GCTGCTTGGCTCGATTCTTTCTAACATTTTGCTTGTACTTGGCTGCG-CTTTTTTCTGTG 622
Query 545 GTGGGCTTGTATTTTCCC-AGAAAGAGCAAGTCTTTGAC-AAAGGAAATGCCGTTGTGAA 602
| || ||||| |||||| |||||| |||||||||||| ||||| ||||| |||||||
Sbjct 623 GCGGCCTTGT-GTTTCCCGGGAAAGATCAAGTCTTTGACAAAAGG-AATGCAGTTGTGAG 680
Query 603 TTCGGG-ATTGCTTTTGATGGCTGTCATGGGGCTACTCTTCCCTGCAGTTCTTCATTACA 661
|||||| | ||||||| ||||| |||||||| ||||||||||| || ||||||||||||
Sbjct 681 TTCGGGCA-TGCTTTTAATGGCAGTCATGGGACTACTCTTCCCCACATTTCTTCATTACA 739
Query 662 CGCACAGTGAGGTTCATGCTGGCTCATCAGAGCTTGCTCTCTCAAGGTTCAGCAGTTGCA 721
||||||| |||||||||||||| ||||||||||||||||| || || || | |||||| |
Sbjct 740 CGCACAGCGAGGTTCATGCTGGATCATCAGAGCTTGCTCTGTCGAGATTTATCAGTTGTA 799
Query 722 TAATGCTCGTTGCCTATGCTGCTTACCTCTTTTTCCAGTTAAAGAGCCAGCCGAGTTCTT 781
||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||
Sbjct 800 TAATGCTCGTTGCCTATGCAGCTTATCTCTTTTTCCAGTTAAAGAGCCAGCCAAGTT-TT 858
Query 782 ATACCCCTCTTACCGAGGAAACAAACCAGAATGAAGAAGCTTCAGACGATGATGAAGATC 841
|| ||||||| |||| |||||||| |||||| ||||| |||||||||||||||
Sbjct 859 -TA-------TACCGAGAAAACTAACCAGAACGAAGAAACTTCAAACGATGATGAAGATC 910
Query 842 CTGAGATCTCCAAGTGGGAAGCTATCATCTGGCTTTCAATCTTGACGGCTTGGGTCTCTC 901
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 911 CTGAGATCTCCAAGTGGGAAGCTATCATCTGGCTTTCAATCTTTACGGCTTGGGTCTCTC 970
Query 902 TTCTTTCCGGCTATCTTGTCGATGCCATTGAGGGTGCTTCGGTCTCATGGAAGATACCAA 961
||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 971 TTCTTTCGGGCTATCTTGTCGATGCCATAGAGGGTACTTCGGTCTCATGGAAGATACCAA 1030
Query 962 TCTCTTTTATCAGTGTAATCTTGCTTCCTATAGTTGGGAATGCGGCTGAGCATGCAGGTG 1021
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 TCTCTTTTATCAGTGTCATCTTGCTTCCTATAGTTGGGAATGCGGCTGAGCATGCAGGTG 1090
Query 1022 CCATTATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTGGGAGTGGCTATTGGATCCT 1081
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1091 CGATTATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTGGGAGTGGCTATTGGATCCT 1150
Query 1082 CAATTCAGATTTCTATGTTTGCGGTTCCTTTCTGTGTGGTGATCGGATGGATGATGGGTG 1141
| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1151 CCATTCAGATTTCTATGTTCGCGGTTCCTTTTTGTGTGGTGATCGGATGGATGATGGGTG 1210
Query 1142 CACAAATGGACCTAAATTTCCAGCTATTTGAGACAGCTGCACTGTTTATAACTGTTATTG 1201
|||||||||| |||||| |||||||||||||||| ||| | ||| | |||||||||||||
Sbjct 1211 CACAAATGGATCTAAATCTCCAGCTATTTGAGACGGCTACTCTGCTCATAACTGTTATTG 1270
Query 1202 TTGTAGCTTTCTTTCTCCAG---GAAGGGACATCGAATTACTTCAAAGGATTGATGCTCA 1258
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 1271 TTGTAGCTTTCTTTCTCCAGTTAGAAGGGACATCGAATTACTTCAAAAGATTGATGCTCA 1330
Query 1259 TTCTTTGTTACTTGATAGTCGCTGCTAGTTTCTTTGTACACGAAGATCCTCATCAAG 1315
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 TTCTTTGCTATTTGATAGTCGCTGCTAGTTTCTTTGTACACGAAGATCCTCATCAAG 1387
> AT3G13320.1 | Symbols: CAX2, atcax2 | cation exchanger 2 | chr3:4314529-4318351
FORWARD LENGTH=2120
Length=2120
Score = 1424 bits (771), Expect = 0.0
Identities = 1154/1339 (86%), Gaps = 26/1339 (2%)
Strand=Plus/Plus
Query 1 ATGGGTTGTTGTAAGGTGCCAGCTCTTATTCAGGCGCAGGTAGAAATGGGGTTGGTTAAT 60
||| |||||||||| ||||||| ||||||| | || || || ||||||| || || ||||
Sbjct 441 ATGAGTTGTTGTAAAGTGCCAGTTCTTATTGAAGCACAAGTTGAAATGGTGTCGGCTAAT 500
Query 61 GATGTTGAGCACAAAAGCCTTTTTAGACGAG-ATACAGATTCCCCACAAAGAAAAGCAGC 119
|| ||||| |||||||||| ||||| | || | | |||| || |||||| |||| |||
Sbjct 501 GAACTTGAGAACAAAAGCCTATTTAGGCAAGAAGA-AGATGCCACACAAACTAAAGAAGC 559
Query 120 TTCCTTGATGGAACAAGGATCACTTTCTGCAAGTTT--TCGAGAACGCGCAACTAAAACA 177
||| || ||||| ||||||||||||||| ||||||| | || || ||| ||||| ||
Sbjct 560 TTCTTTAATGGAGCAAGGATCACTTTCTACAAGTTTCCCCCAGCACACGC--CTAAAGCA 617
Query 178 CCTATGAACAGTGTGC-TACAGAGCTTCAAGATCGTGATTTTATCG-AATAAACTCAATC 235
|| | |||||| || | || | ||| | |||||||||||||| | | |||||||||||||
Sbjct 618 CCAAAGAACAGCGTACTTA-ATAGCATAAAGATCGTGATTTT-TTGTAATAAACTCAATC 675
Query 236 TTTTGTTGCCTTTTGGTCCTCTAGCAATACTACTCCACTACTTGACT-GATAATAAGGGA 294
| | | ||||| ||||||||||| ||| | |||||||| ||| | |||| ||||||
Sbjct 676 TACTACTACCTTTCGGTCCTCTAGCCATATTGGTCCACTACATGA-TAGATAGTAAGGGG 734
Query 295 TGGATCTTCTTACTGAGC-TTAGTAGGCATCACACCATTAGCTGAACGTCTCGGATATGC 353
||| | ||||| |||| | ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct 735 TGGGTGTTCTTGCTGA-CGTTAGTAGGCATTACACCATTGGCTGAACGTCTAGGATATGC 793
Query 354 CACAGAGCAATTGGCTTGTTACACGGGTCCAACTGTTGGAGGCCTCCTAAATGCTACATT 413
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 794 CACAGAGCAACTGGCTTGTTACACGGGTCCAACTGTTGGAGGCCTCTTAAATGCTACATT 853
Query 414 TGGAAACGTGACAGAGCTGATCATATCGATTTTCGCTCTT-AAAAATGGAATGATACGCG 472
|| || |||||||||||||||||||| ||||||||| || ||||||||||||||||| |
Sbjct 854 CGGGAATGTGACAGAGCTGATCATATCAATTTTCGCT-TTGAAAAATGGAATGATACGTG 912
Query 473 TTGTACAGCTGACACTGCTCGGCTCGATTCTTTCTAACATGTTGCTTGTACTTGGCTGCG 532
|||| |||||||| | || ||||| ||||| ||||||||||| ||||||||||||||||
Sbjct 913 TTGTTCAGCTGACGTTACTAGGCTCAATTCTGTCTAACATGTTACTTGTACTTGGCTGCG 972
Query 533 CCtttttttGTGGTGGGCTTGTATTTTCCCAGAAAGAGCAAGTCTTTGACAAAGGAAATG 592
|||| |||||||||||||| || |||| ||| ||||| ||||||||||||||||||| ||
Sbjct 973 CCTTCTTTTGTGGTGGGCTAGTCTTTTACCAAAAAGACCAAGTCTTTGACAAAGGAATTG 1032
Query 593 CCGTTGTGAATTCGGGATTGCTTTTGATGGCTGTCATGGGGCTACTCTTCCCTGCAGTTC 652
| ||||||||| ||||||||||||||||||||||||||| |||||||||| || ||||
Sbjct 1033 CTACTGTGAATTCAGGATTGCTTTTGATGGCTGTCATGGGGATACTCTTCCCGGCTGTTC 1092
Query 653 TTCATTACACGCACAGTGAGGTTCATGCTGGCTCATCAGAGCTTGCTCTCTCAAGGTTCA 712
|||| ||||| || || |||||||||||||| ||||||||||| || || ||||||||||
Sbjct 1093 TTCACTACACCCATAGCGAGGTTCATGCTGGATCATCAGAGCTAGCCCTGTCAAGGTTCA 1152
Query 713 GCAGTTGCATAATGCTCGTTGCCTATGCTGCTTACCTCTTTTTCCAGTTAAAGAGCCAGC 772
|||||||||||||||| | || ||||||||||||||||| |||||||||||||||||
Sbjct 1153 GCAGTTGCATAATGCTTATAGCTTATGCTGCTTACCTCTTCTTCCAGTTAAAGAGCCAAT 1212
Query 773 CGAGTTCTTATACCCCTCT-TACCGAGGAAACAAACCAGAATGAAGAAGCTTCAGACGAT 831
| | |||||||| |||||| | |||||| |||| ||||| |||||| |||| | |||
Sbjct 1213 CTAATTCTTATAGCCCTCTCGA-TGAGGAATCAAATCAGAACGAAGAAACTTCTGCCGAA 1271
Query 832 GATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATCATCTGGCTTTCAATCTTGACGGCT 891
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct 1272 GATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATCATTTGGCTTTCAATATTGACTGCT 1331
Query 892 TGGGTCTCTCTTCTTTCCGGCTATCTTGTCGATGCCATTGAGGGTGCTTCGGTCTCATGG 951
||||||||||||||||| ||||||||||| |||||||| |||||||| || |||||||||
Sbjct 1332 TGGGTCTCTCTTCTTTCTGGCTATCTTGTTGATGCCATAGAGGGTGCCTCAGTCTCATGG 1391
Query 952 AAGATACCAATCTCTTTTATCAGTGTAATCTTGCTTCCTATAGTTGGGAATGCGGCTGAG 1011
|| |||||||| ||||||||||| ||||||||||||||||||||||| || |||||
Sbjct 1392 AATATACCAATAGCTTTTATCAGTACCATCTTGCTTCCTATAGTTGGGAACGCAGCTGAA 1451
Query 1012 CATGCAGGTGCCATTATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTGGGAGTGGCT 1071
|||||||| || || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1452 CATGCAGGGGCTATCATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTGGGAGTGGCT 1511
Query 1072 ATTGGATCCTCAATTCAGATTTCTATGTTTGCGGTTCCTTTCTGTGTGGTGATCGGATGG 1131
||||| ||||| || |||||||| ||||||||||| || ||||| |||||||| ||||||
Sbjct 1512 ATTGGGTCCTCGATCCAGATTTCCATGTTTGCGGTCCCATTCTGCGTGGTGATTGGATGG 1571
Query 1132 ATGATGGGTGCA-CAAATGGACCTAAATTTCCAGCTATTTGAGACAGC--TGCACTGTTT 1188
||||||||| || || |||||||| || |||||||| |||||||| || ||| ||||
Sbjct 1572 ATGATGGGT-CAACAGATGGACCTTAACTTCCAGCTTTTTGAGACGGCGATGC--TGTTC 1628
Query 1189 ATAACTGTTATTGTTGTAGC-TTTCTTTCTCCAGGAAGGGACATCGAATTACTTCAAAGG 1247
|| |||||||| || ||||| ||| ||||||||||||||| |||||||||||||||||||
Sbjct 1629 ATCACTGTTATAGTAGTAGCATTT-TTTCTCCAGGAAGGGTCATCGAATTACTTCAAAGG 1687
Query 1248 ATTGATGCTCATTCTTTGTTACTTGATAGTCGCTGCTAGTTTCTTTGTACACGAAGATCC 1307
||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct 1688 ATTGATGCTGATTCTTTGTTATTTGATAGTAGCTGCCAGTTTCTTTGTACACGAAGATCC 1747
Query 1308 TCATCAAGATGATATATAA 1326
||| ||||||| |||||||
Sbjct 1748 TCACCAAGATGGTATATAA 1766
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65260708500
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5