BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg914939
Length=2436
Score E
Sequences producing significant alignments: (Bits) Value
AT1G56540.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 538 1e-151
AT1G56510.1 | Symbols: WRR4, ADR2 | Disease resistance protein ... 453 4e-126
AT1G56520.2 | Symbols: | Disease resistance protein (TIR-NBS-L... 405 1e-111
AT2G16870.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 348 2e-94
AT4G14370.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 279 6e-74
AT1G64070.1 | Symbols: RLM1 | Disease resistance protein (TIR-N... 259 8e-68
AT1G63750.3 | Symbols: | Disease resistance protein (TIR-NBS-L... 180 7e-44
AT5G58120.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 78.7 2e-13
> AT1G56540.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr1:21181664-21185306 FORWARD LENGTH=3291
Length=3291
Score = 538 bits (291), Expect = 1e-151
Identities = 399/450 (89%), Gaps = 12/450 (3%)
Strand=Plus/Plus
Query 163 GAAAACTATAAGATTGGTTTTGGTGAGTATGGTTTGAAGCTGCGCTTACAAGAGCAACTT 222
|||| ||||||||||||| ||| |||||||||||||| | |||| |||||||||||||||
Sbjct 742 GAAAGCTATAAGATTGGTCTTGTTGAGTATGGTTTGAGGTTGCGGTTACAAGAGCAACTT 801
Query 223 CTTTCAAAGATTTTGAACCAAAATGGTATGAGGATAGACCATTTAGGTGTGATACAAGAA 282
||||||||||||||||||| | |||| || ||||||| ||||||||||||||||| |||
Sbjct 802 CTTTCAAAGATTTTGAACCTAGATGGCATTAGGATAGCCCATTTAGGTGTGATACGAGAG 861
Query 283 AGGCTACACGACCAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTCTAGATCAACTT 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 862 AGGCTACACGACCAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTCTAGATCAACTT 921
Query 343 GATGCGTTGGCTAATAT-GAGGTGGTTTGGTGCTGGAAGTAGGGTCATAGTGACCACTGA 401
||||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 922 GATGCTTTGGCTAATATCGAG-TGGTTTGGTCCTGGAAGTAGGGTCATAGTGACCACTGA 980
Query 402 AAACAAAGAAATTTTGCAGCAGCATGGTGTTAGCGCTACATATCAAGTGGGGTTTCCATC 461
||||||||| ||||| ||||| |||||| | || | || ||| || ||||| ||||||||
Sbjct 981 AAACAAAGAGATTTTACAGCAACATGGTATCAGTGATATATACCACGTGGGTTTTCCATC 1040
Query 462 A-GAAAGAGAAGCTCTAATGATCTTTTGTCTATCTGCTTTTAGACAAACTTT-TCCACCT 519
| | || ||||||| ||||||||||||||||||| |||||||||||| || | |||||||
Sbjct 1041 AAGTAA-AGAAGCTTTAATGATCTTTTGTCTATCCGCTTTTAGACAA-CTCTCTCCACCT 1098
Query 520 CAT-GGATTTAT-AGCTCTTGCGGATGAAGTTGCAACGATTTGTGGTAATCTTCCATTGG 577
|| || ||||| | |||||| | ||||||||||| | |||||||| ||||||||||||
Sbjct 1099 GATCGG-TTTATGAA-TCTTGCTGCTGAAGTTGCAAAGCTTTGTGGTTATCTTCCATTGG 1156
Query 578 CTCTGCATGTTTT-GGGATCTTCATTTCGG 606
||||||||||||| ||| || ||||| |||
Sbjct 1157 CTCTGCATGTTTTAGGG-TCATCATTGCGG 1185
Score = 444 bits (240), Expect = 2e-123
Identities = 630/811 (78%), Gaps = 55/811 (7%)
Strand=Plus/Plus
Query 911 TATCAATTGACTTAGAAGAGAACAGTGAATTAATGATAAGCGC-AAGAGCTTTTCAAAGA 969
||||| ||||| ||| ||||| || |||||| |||||||| ||| || ||| |||||
Sbjct 1595 TATCATTTGACGTAGGAGAGATCAACAAATTAACAATAAGCGCTAAG-GCGTTTGAAAGA 1653
Query 970 ATGCACAATCtttttttCCTGAAAGTTTACAATGCGGGGCGTACTGGAAAAAGACAATTA 1029
|||||||||||||| || || ||||||||| || || || |||||||||| ||||| |
Sbjct 1654 ATGCACAATCTTTTGTTGCTAAAAGTTTACGATCCGTGGTTTACTGGAAAAGGACAAGTG 1713
Query 1030 TACGTACCCGAGGAGATGGAGTTCCCACCTCGCCTAAGGTTACTTTATTGGGATGCATAC 1089
|| | || ||||||||||| || | ||||||||||| |||||| |||||||||||||
Sbjct 1714 CACATTCCAGAGGAGATGGATTTTCTTCCTCGCCTAAGCTTACTTCGTTGGGATGCATAC 1773
Query 1090 CCGAGAAAGAGTCTTCCTCGTAGATTTTTCGCAGAAAATCTCGTC-ACACTCAACATGAA 1148
||||||||| |||||||||||||| | | |||||||||||||| | ||||||||||
Sbjct 1774 ACGAGAAAGACCCTTCCTCGTAGATTCTGCCCAGAAAATCTCGTCGA-ACTCAACATGCC 1832
Query 1149 AGATAGCGAGCTCGAGAAGCTATGGGAAGGAACTCAGAC-GCTTGCAAATCTCAAGGA-G 1206
|||||| ||||||||||||||||||||||||||||| | ||||||||||||||| | |
Sbjct 1833 GGATAGCCAGCTCGAGAAGCTATGGGAAGGAACTCAG-CTGCTTGCAAATCTCAAA-ACG 1890
Query 1207 ATGGATTTCACGCTGTCGTCTCATTTGAAGGAACTCCCAGATCTTTCAAATGCTATAAAT 1266
||| | || | ||| |||| |||||||||||||||| ||||||||||||||| ||||
Sbjct 1891 ATGAAGCTCTCTAGGTCATCTCGTTTGAAGGAACTCCCAAATCTTTCAAATGCTAAAAAT 1950
Query 1267 TTGGAGAGAT-TGAATCTG-AGTGCTTGCAGT-GCTTTGGTT-GAGCTTCCATCCTCAAT 1322
||||| | | || || || | || ||| || |||||| || |||||||||||||||||
Sbjct 1951 CTGGAGCG-TCTGGATTTGCA-TGAATGC-GTTGCTTTG-TTAGAGCTTCCATCCTCAAT 2006
Query 1323 TTCGAATCTTCATAAA--ATAGCTGAGTTACAGATGGTAAAC-T-GCAG-CAATCTAGAA 1377
||| |||||||||||| ||| || ||| ||| | || | | |||| | |||| ||
Sbjct 2007 TTCTAATCTTCATAAACTATA-CTTC-TTAGAGACG--AATCATTGCAGACG-TCTACAA 2061
Query 1378 GTCATTCCAAGTCTCATCAACTTGACATCTCTT-AATAGTATCAACCTGCTTGGATGCTC 1436
|||||||||| ||||| ||||||| |||||| || | |||||| || | |||||||
Sbjct 2062 GTCATTCCAACTCTCACCAACTTGGTATCTCTCGAAGA-TATCAAGATGATGGGATGCTT 2120
Query 1437 ACGACT-AAGACGTTTTCCAGAT-TTACCTATCAACATC-TGGACACTCTATGTAACAGA 1493
|||||| || | ||||||||||| || ||| ||||||| | | |||| ||||| ||
Sbjct 2121 ACGACTGAAAA-GTTTTCCAGATATT-CCTGCCAACATCATT-AGGCTCTCTGTAATGGA 2177
Query 1494 GAA-A-G-TGGTAGAGGAGTTGCCTGCATCACTTAGGCGTTGCTCTCGTCTTAA-TCATG 1549
|| | | | | ||| | || || || |||||||||| || ||| | | || | || |
Sbjct 2178 GACTACGATTGCAGA--ATTTCCC-GCGTCACTTAGGCATTTCTCGCATATTGAGTC-T- 2232
Query 1550 TTA-ATATACAA-GGCAATGGACATCCCAAGACCTTCTT-AACACTTCTCCCGACGAGTG 1606
|| ||||| | |||| || | ||| ||||||||| || |||||||||||| |||||||
Sbjct 2233 TTCGATATA-AGTGGCAGTGTAAATCTCAAGACCTT-TTCAACACTTCTCCCCACGAGTG 2290
Query 1607 TAACAAACCTAGAGTTACACGGGAGACGTTTT-ATG-GCAA-AC-GATTGCCTCAAAGGT 1662
||||| | ||| | || || || || || | | | | || |||||| ||||||||
Sbjct 2291 TAACAGAGCTACACATAGACAACAGTGGTATTGA-GAGTATTACAGATTGCATCAAAGGT 2349
Query 1663 CTTCATAATCTGGCAT-TCCTTACTCTATCA 1692
||||||||||| | | ||||| ||||||||
Sbjct 2350 CTTCATAATCTA-CGTGTCCTTGCTCTATCA 2379
Score = 318 bits (172), Expect = 1e-85
Identities = 258/298 (87%), Gaps = 12/298 (4%)
Strand=Plus/Plus
Query 614 GTCTTGATGGAA-AACTTGAGAGTGTATTGAAAGTGGACTAT-AAGAGTTTACATGAGAA 671
|||||||||||| || ||||||||||||||||||||| |||| || ||||||||||||||
Sbjct 1235 GTCTTGATGGAAGAA-TTGAGAGTGTATTGAAAGTGGGCTATGAA-AGTTTACATGAGAA 1292
Query 672 AGACCAAGCTCTATTTCTCCACGTTGCAATCTTCTTCAATCATGAACATGTTGATCATGT 731
||||||||||||||||||| || ||||| ||||||||||| || |||||| |||| ||||
Sbjct 1293 AGACCAAGCTCTATTTCTCTACATTGCAGTCTTCTTCAATTATCAACATGCTGATTATGT 1352
Query 732 GGCATCCATGCTTGCAAAAAGC-AACTTGAACGTTAGACATGGGTTGAAAGTCCTAGCTA 790
| |||||||||| ||||||| | |||||||| ||||||| |||||| ||| | |||| |
Sbjct 1353 GACATCCATGCTGGCAAAAA-CTAACTTGAATGTTAGACTTGGGTTAAAAATATTAGCCA 1411
Query 791 ATAGATGTCTCATACAAATAGACCATG-----AAAG-TAAAGTGGTAATGCACCGTTTGC 844
||||| ||| ||||| |||| |||| |||| || ||||||||||||||||||||
Sbjct 1412 ATAGACATCTTATACATATAGGTCATGGCGCTAAAGGTATAGTGGTAATGCACCGTTTGC 1471
Query 845 TACAAGTAATGGCCAGACAAGTCATTTCCAGACAAGCGCCTTGGAAACGCCAGATTCT 902
|| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 1472 TAAAAGTAATGGCTAGACAAGTCATTTCCAAACAAGAGCCTTGGAAACGCCAGATTCT 1529
> AT1G56510.1 | Symbols: WRR4, ADR2 | Disease resistance protein
(TIR-NBS-LRR class) | chr1:21167589-21173632 FORWARD LENGTH=3657
Length=3657
Score = 453 bits (245), Expect = 4e-126
Identities = 385/452 (85%), Gaps = 11/452 (2%)
Strand=Plus/Plus
Query 157 TCTTT-GGAAAACTATAAGATTGGTTTTGGTGAGTATGGTTTGAAGCTGCGCTTACAAGA 215
||||| |||||||||||||||| || ||||||| ||||| ||||| |||||||||| ||
Sbjct 844 TCTTTGGGAAAACTATAAGATTTGTACTGGTGAGCATGGTGTGAAGTTGCGCTTACATGA 903
Query 216 GCAACTTCTTTCAAAGATTTTGAACCAAAATGGTATGAGGA-TAGAC-CATTTAGGTGTG 273
|||| || ||||||| |||||||| ||||||||| || | | || || |||||| |||||
Sbjct 904 GCAATTTGTTTCAAAAATTTTGAAACAAAATGGTTTG-GAACTA-ACTCATTTAAGTGTG 961
Query 274 ATACAAGAAAGGCTACACGACCAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTCTA 333
||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 962 ATAAAAGATAGGCTACAAGACAAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTTTA 1021
Query 334 GATCAACTTGATG-CGTTGGCTAATATGAGGTGGTTTGGTGCTGGAAGTAGGGTCATAGT 392
| ||||||||| | | |||||| |||||| |||||||||| |||||||||||||||||||
Sbjct 1022 GCTCAACTTGA-GACTTTGGCTGATATGACGTGGTTTGGTCCTGGAAGTAGGGTCATAGT 1080
Query 393 GACCACTGAAAACAAAGAAATTTTGCAGCAGCATGGTGTTAGCGCTACATATCAAGTGGG 452
|| |||||||||||||| ||||||||||| |||||| | | | || ||| ||||| ||
Sbjct 1081 AACGACTGAAAACAAAGAGATTTTGCAGCAACATGGTATCGGTGATATATACCAAGTTGG 1140
Query 453 GTTTCCATCAGAAAGAGAAGCTCTAATGATCTTTTGTCTATCTGCTTTTAGACAAACTTT 512
| |||||||||||| ||||| |||| |||||| |||||||||||||||| |||| | |
Sbjct 1141 ATATCCATCAGAAAGCGAAGCACTAACGATCTTCTGTCTATCTGCTTTTAAACAAGCCTC 1200
Query 513 TCCACCTCATGGATTTATAGCTCTTGCGGATGAAGTTGCAACGA-TTTGTGGTAATCTTC 571
||||||| |||| ||||| | ||||||||||||||||| || || |||||| ||| ||||
Sbjct 1201 TCCACCTGATGGGTTTATGGATCTTGCGGATGAAGTTGTAA-GAATTTGTGATAAGCTTC 1259
Query 572 CATTGGCTCTGCATGTTTT-GGGATCTTCATT 602
||||||||||| |||||| ||| || |||||
Sbjct 1260 CATTGGCTCTGTGTGTTTTAGGG-TCGTCATT 1290
> AT1G56520.2 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr1:21174664-21178974 REVERSE LENGTH=3624
Length=3624
Score = 405 bits (219), Expect = 1e-111
Identities = 368/439 (84%), Gaps = 14/439 (3%)
Strand=Plus/Plus
Query 162 GGAAAACTATAAGATTGGTTTTGGTGAGTATGGTTTGAAGCTGCGCTTACAAGAGCAACT 221
||||| ||||||||||||| ||| ||||||| |||||||| ||| ||||||| |||||||
Sbjct 789 GGAAAGCTATAAGATTGGTCTTGATGAGTATCGTTTGAAGTTGCACTTACAACAGCAACT 848
Query 222 TCTTTCA-AAGATTTTGAACCAAAATGGTATGAGGATAGACCATTTAGGTGTGAT-ACAA 279
|||| || | | |||| || || || || ||| | | ||||||| ||||||| | ||
Sbjct 849 TCTTGCATATG-TTTTAAATCAGGATAAAATTAGGGTGGGCCATTTAAGTGTGATGA-AA 906
Query 280 GAAAGGCTACACGACCAGAAGGTTCTTATCATTCTTGATGATGTGGAG-AGTCTAGATCA 338
|||||||| ||||| || ||||||||| |||||||||||||||||| | |||| ||||
Sbjct 907 GAAAGGCTTGACGACTTGAGGGTTCTTATTATTCTTGATGATGTGGAGCA-TCTATATCA 965
Query 339 ACTTGATGCGTTGGCTAATATGAGGTGGTTTGGTGCTGGAAGTAGGGTCATAGTGACCAC 398
||| || || |||||| |||| |||||||||||| ||||||||||||| |||||||||||
Sbjct 966 ACTAGAGGCTTTGGCTGATATCAGGTGGTTTGGTCCTGGAAGTAGGGTGATAGTGACCAC 1025
Query 399 TGAAAACAAAGAAATTTTGCAGCAGCATGGTGT-TAGCGCTACATATCAAGTGGGGTTTC 457
|||||||| ||| ||||||| ||| |||||| | || | || ||| || ||||| ||||
Sbjct 1026 TGAAAACAGAGAGATTTTGCTGCAACATGGTATCAAG-GATATATACCATGTGGGTTTTC 1084
Query 458 CATCAGAAAGAGAAGCTCTAATGATCTTTTGTCTATCTGCTTTTAGACAAACTTTTCCAC 517
|||||||| ||||||||||||||||||||||||||||||||||||||||| | | |||||
Sbjct 1085 CATCAGAAGGAGAAGCTCTAATGATCTTTTGTCTATCTGCTTTTAGACAACCCTCTCCAC 1144
Query 518 CTCATGGATTTAT-A-GCTCTTGCGGATGAAGTTGCAACG-ATTTGTGGTAATCTTCCAT 574
|| |||| ||| | | ||| | | |||||||||||| | |||||||||||||||||||
Sbjct 1145 CTTATGGTTTTTTGAAGCT-TA-CATATGAAGTTGCAA-GTATTTGTGGTAATCTTCCAT 1201
Query 575 TGGCTCTGCATGTTTTGGG 593
||| |||||||||||||||
Sbjct 1202 TGGGTCTGCATGTTTTGGG 1220
Score = 152 bits (82), Expect = 1e-35
Identities = 124/144 (86%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 1710 AGAAGCACGACGAGCGATTATTCAACAATTGTTTGTTTACGGGT-TGGCTATCTTACCAG 1768
||||||||||||||||||||||||||||| ||||||| | ||| || |||||||||||
Sbjct 2580 AGAAGCACGACGAGCGATTATTCAACAATCGTTTGTTCATGGGAATGT-TATCTTACCAG 2638
Query 1769 GAAGAGAAGTGCCTGCAGA-GTTCGATCACCGTGCCAGAGGAAATTCCTTAACAGTTCAT 1827
||||||||| | || ||| || |||| |||| || |||||||||| ||||||| ||| |
Sbjct 2639 CAAGAGAAGTACTTGAAGAAGT-CGATTACCGAGCGAGAGGAAATTGCTTAACAATTCCT 2697
Query 1828 CATTCTGCTTTCAACAGATTTAAG 1851
| ||||||||||||||||||||||
Sbjct 2698 CCTTCTGCTTTCAACAGATTTAAG 2721
> AT2G16870.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr2:7308077-7311686 REVERSE LENGTH=3330
Length=3330
Score = 348 bits (188), Expect = 2e-94
Identities = 421/526 (80%), Gaps = 46/526 (9%)
Strand=Plus/Plus
Query 1034 TACCCGAGGAGATGGAGTTCCCACCTCGCCTAAGGTTACTTTATTGGGATGCATACCCGA 1093
|||| ||||| ||| |||| |||||||||||||||||||| ||||||| ||||| ||||
Sbjct 1709 TACCTGAGGACATGAAGTTTCCACCTCGCCTAAGGTTACTACATTGGGAAGCATATCCGA 1768
Query 1094 GAAAGAGTCTTCCTCGTAGATTTTTCGC-AGAAAATCTCGTC-ACACTCAACATGAAAGA 1151
| ||||||||||||| | |||||| | | |||||||| ||| | |||||| ||||||||
Sbjct 1769 GCAAGAGTCTTCCTCTTGGATTTTGC-CTGGAAAATCTTGTCGA-ACTCAATATGAAAGA 1826
Query 1152 TAGCGAGCTCGAGAAGCTATGGGAAGGAACTCAGAC-GCTTG-CAAATCTCAAGGAGATG 1209
|||| ||||||| ||||| ||||||||||||||| | | ||| ||||||| ||| |||||
Sbjct 1827 TAGCCAGCTCGAAAAGCTCTGGGAAGGAACTCAG-CTG-TTGACAAATCTTAAGAAGATG 1884
Query 1210 GA-TT-TCACGCTGTC-GTCTCATTTGAAGGAACTCCCAGATCTTTCAAATGCTATAAAT 1266
|| || ||| | || || ||||||||||||||||||||||||||||||||||| |||
Sbjct 1885 GATTTGTCAAG--ATCAGT-TCATTTGAAGGAACTCCCAGATCTTTCAAATGCTACAAAC 1941
Query 1267 TTGGAGAGATTG-AATCTGA-GTGCTTGCAGTGCTTTGGTTGAGCTTCCATCCTCAATTT 1324
|||||||| || || || | ||| |||||| |||||||| ||||||||| || |||
Sbjct 1942 CTGGAGAGACTGGAA-CT-ATGTGATTGCAGGGCTTTGGTAGAGCTTCCAAAGTCTATTG 1999
Query 1325 CGAATCTTCATAAAATAGCTGAG-TTACAGATGG-TAAACTGCAGCAA-TCTAGAAGTCA 1381
||||||||||||| ||| || ||| ||||| ||| ||||| || |||||||||||
Sbjct 2000 GGAATCTTCATAAACTAGA-GAACTTAGTGATGGCTAA-CTGCAT-AAGTCTAGAAGTCA 2056
Query 1382 TTCCAAGTCTCATCAACTTGACATCTCTTAAT-AGTATCAACC-TG-CTTGGATGCTCAC 1438
| |||| || |||||||||| |||||||| | | ||||| || || || ||||||||||
Sbjct 2057 TACCAACTCACATCAACTTGGCATCTCTTGAGCA-TATCA-CCATGACT-GGATGCTCAC 2113
Query 1439 GACT-AAGACGTTTTCCAGATTTACCTATCAA-CATCTG-GACACTC-TATGTAA-CAGA 1493
|||| || || ||| |||||||| ||| ||| ||| || || |||| | | ||| | |
Sbjct 2114 GACTGAAAACATTT-CCAGATTTTTCTA-CAAACAT-TGAGAGACTCCT-TCTAATC-G- 2167
Query 1494 GAA-AGT-GGTAGAGGA-GTTGCCTGCATCACTTAGGCGTTGCTCT 1536
| | | | |||||| || || |||||||||| | |||| ||| |||
Sbjct 2168 GCACA-TCGGTAGAAGAAGT-GCCTGCATCAATCAGGCATTGGTCT 2211
> AT4G14370.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr4:8279641-8283263 REVERSE LENGTH=3220
Length=3220
Score = 279 bits (151), Expect = 6e-74
Identities = 287/351 (82%), Gaps = 16/351 (5%)
Strand=Plus/Plus
Query 187 GAGTATGGTTTGAAGCTGCGCTTACAAGAGCAACTTCTTTCAAAGATTTTGAACCAAAAT 246
||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 637 GAGTATGGTTTTAAGCTGCGTTTACAAGAGCAACTTCTTTCAAAGATTTTAAACCAAAAT 696
Query 247 GGTATGAGGATAGACCATTTAGGTGTGATACAAGAAAGGCTACACGACCAGAAGGTTCTT 306
|||||||||||| |||||||||||| ||||||||||||||| |||||| || || |||
Sbjct 697 GGTATGAGGATATACCATTTAGGTGCAATACAAGAAAGGCTATGCGACCAAAAAGTGCTT 756
Query 307 ATCATTCTTGATGATGTGGA-GAGTCTAGATCAACTT-GATGCGTTGGCTAAT-ATGAG- 362
||| |||||||||||||| | || |||| | ||| || || || ||||||||| | ||
Sbjct 757 ATCGTTCTTGATGATGTGAATGA-TCTAAAGCAA-TTAGAGGCTTTGGCTAATGA-GACT 813
Query 363 -GT-GGTTTGGTGCTGGAAGTAGGGTCATAGTGACCACTGAAAACAAAGAAATTTTGCAG 420
|| |||||||| ||||||||||| |||| |||||||| ||| | |||| ||||| ||
Sbjct 814 AGTTGGTTTGGTCCTGGAAGTAGGATCATTGTGACCACAGAAGATAAAGGGCTTTTGGAG 873
Query 421 CAGCATGGTGTTAGCGCTACATATCAAGTGGGGTTTCCATCAGAAAGA-GAAGCTCTA-A 478
|| |||||| | | | || || || || || |||||||| | ||| |||||||| |
Sbjct 874 CAACATGGTATCAACAAAACTTACCATGTAGGTTTTCCATCT-ATAGAAGAAGCTCTTGA 932
Query 479 TGATCTTTTGTCTATCTGCTTTTAGACAAA-CTTTTCCACCTCATGGATTT 528
|||||||||| ||| |||||||||| ||| || | |||||| |||| |||
Sbjct 933 -GATCTTTTGTATATATGCTTTTAGAAAAAGCTCT-CCACCTGATGG-TTT 980
> AT1G64070.1 | Symbols: RLM1 | Disease resistance protein (TIR-NBS-LRR
class) family | chr1:23779949-23783449 FORWARD LENGTH=2994
Length=2994
Score = 259 bits (140), Expect = 8e-68
Identities = 405/528 (77%), Gaps = 38/528 (7%)
Strand=Plus/Plus
Query 1034 TACCCGAGGAGATGGAGTTCCCACCTCGCCTAAGGTTACTTTATTGGGATGCATACCCGA 1093
|||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||| |
Sbjct 1712 TACCAGAGGACATGGAGTTTCCACCTCGCCTAAGGTTACTCCATTGGGATGCATACCCAA 1771
Query 1094 GAAAGAGTCTTCCTCGTAGATTTTTCGCAGAAAATCTCGTC-ACACTCAACATGAAAGAT 1152
| ||| ||||||||| || |||| || |||||||| ||| | |||| | |||||||||
Sbjct 1772 GCAAGTGTCTTCCTCTTAAATTTCGGGCGGAAAATCTAGTCGA-ACTCGATATGAAAGAT 1830
Query 1153 AG-CGAGCTCGAGAAGCTATGGGAAGGAACTCAGAC-GCTTG-C-AAATCTCAAGGAGAT 1208
|| || ||||||| | || ||| |||||||||| | || || | ||| |||||| || |
Sbjct 1831 AGCCG-GCTCGAGTACCTCTGGCCAGGAACTCAG-CTGC-TGACGAAA-CTCAAGAAGCT 1886
Query 1209 GGATTT-CACGCTGTCGTCTCATTTGAAGGAACTCCCAGATCTTTCAAATGCTATAAATT 1267
|||| | | | || | | ||||||||||||||||||||||||||||||||| |||||
Sbjct 1887 AAATTTGGAAGGT-TCATATAATTTGAAGGAACTCCCAGATCTTTCAAATGCTACAAATT 1945
Query 1268 TGGAGA-GATT-GAATCTGAGTGCTTGCAGTGCTTTGGTTGAGCTTCCATCCTCAATTTC 1325
|||||| | || || |||||||| |||| |||||||| ||||||||||| || ||
Sbjct 1946 TGGAGATG-TTAGA-TCTGAGTGTTTGCCTTGCTTTGGCAGAGCTTCCATCTTCTATCAA 2003
Query 1326 GAATCTTCATAAAATAGCTGAGTTACAGATGG-TAAACTGCAGCAA-TCTAGA-AGTCAT 1382
||||||||||||| ||| || | || | |||| | |||| | || ||| | | | ||
Sbjct 2004 GAATCTTCATAAACTAGATGTGATATATATGGATCT-CTGC-GAAAGTCTTCATA-TGAT 2060
Query 1383 TCCAAGTCTCATCAACTTGACATCTCTTAATAGTATCAACCTG-CTTGGATGCTCACGAC 1441
|||| | |||||||||| | |||||| | | ||| || || || |||||| ||| |
Sbjct 2061 ACCAACTAACATCAACTTGGCGTCTCTTGAGACTATGTACATGACT-GGATGCCCAC-AG 2118
Query 1442 T--AAGACGTTTTCCAG-ATTTACCTATCAACA-TCTG-GACACTCTATGTAA-CAGAGA 1495
| || || |||||||| |||| | || ||| | | | || || ||| || |||| |
Sbjct 2119 TTGAAAAC-TTTTCCAGCATTTTC-TA-CAAAAAT-TAAGAGGCTTTATCTAGTCAGA-A 2173
Query 1496 AAGTGGTAGAGGA-GTTGCCTGCATCACTTAGGCGTTGCTCTCGTCTT 1542
|| |||||| || || |||||||||| ||| || ||||||||| |||
Sbjct 2174 CAGGGGTAGAAGAAGT-GCCTGCATCAATTACGCATTGCTCTCGACTT 2220
> AT1G63750.3 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr1:23650848-23655359 FORWARD LENGTH=3514
Length=3514
Score = 180 bits (97), Expect = 7e-44
Identities = 285/372 (77%), Gaps = 28/372 (8%)
Strand=Plus/Plus
Query 1046 TGGAGTTCCCACCTCGCCTAAGGTTACTTTATTGGG-ATGCATACCCGAGAAAGAGTCTT 1104
||||||| |||||||| ||||||||||| |||||| | |||||||| || |||||||||
Sbjct 1834 TGGAGTTTCCACCTCGTCTAAGGTTACTGCATTGGGCA-GCATACCCAAGCAAGAGTCTT 1892
Query 1105 CCTCGTAGATTT-TTCGCAGAAAATCTCGTCA-CACTCAACATGAAAGATAGCGAGCTCG 1162
|||| || |||| || ||| ||| || | |||||| ||| || ||| | |||
Sbjct 1893 CCTCCTACATTTAATC-TGGAATGTCTTGT-AGAACTCAATATGCGGGAAAGCCTGGTCG 1950
Query 1163 AGAAGCTATGGGAAGGAACTC-AGACGCTTGCA-AATCTCAAGGAGATGGATTTCAC-GC 1219
||||||||||||||||||| | | || ||| | ||||||||| | |||||||| || |
Sbjct 1951 AGAAGCTATGGGAAGGAACCCAACAC-CTT-AAGAATCTCAAGTATATGGATTTGACTG- 2007
Query 1220 TGTCGTCTCATTTGAAGGAACTCCCAGATCTTTCAAATGCTATAAATTTGGAG-AGATTG 1278
||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||
Sbjct 2008 AGTCCAAGAATTTGAAGGAACTCCCAGATCTTTCAAATGCTACAAATCTGGAGTATTTTT 2067
Query 1279 AATCTG-AGTG-CT-TGCAGTGCTTTGGTTGAGCTTCCATCCTCAATTT-CGAATCTTCA 1334
| |||| | | || || || | |||||| ||| | |||||||| ||| || |||| ||
Sbjct 2068 A-TCTGGA-TAACTGTG-AGAG-TTTGGTAGAGATCCCATCCTCT-TTTGCGCATCTGCA 2122
Query 1335 TAAAATAGC-TGAGTTACAGATGG-TAAACTGCAGCAATCTAGAAGTCATTCCAAG-TCT 1391
|||| ||| || ||| ||||| ||| ||||| || ||| ||||||||||| | ||
Sbjct 2123 TAAACTAGAGTG-GTTGGAGATGAATAA-CTGCATAAACCTACAAGTCATTCCA-GCTCA 2179
Query 1392 CATCAACTTGAC 1403
||| ||||||||
Sbjct 2180 CATGAACTTGAC 2191
> AT5G58120.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:23517492-23521067 FORWARD LENGTH=3281
Length=3281
Score = 78.7 bits (42), Expect = 2e-13
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 1746 TTA-CGGGTTGGCTATCTTACCAGGAAGAGAAGTGCCTGCAGAGTTCGATCACCGTGCCA 1804
||| |||| |||| ||||||||||||||||||||||||||||||| |||||| | || |
Sbjct 2567 TTATCGGGAAGGCTCTCTTACCAGGAAGAGAAGTGCCTGCAGAGTTTGATCACAGAGCTA 2626
Query 1805 GAGGAAATTCCTT 1817
||| ||||||||
Sbjct 2627 AAGGTAATTCCTT 2639
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120983313450
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5