BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg914952 Length=558 Score E Sequences producing significant alignments: (Bits) Value AT1G56510.1 | Symbols: WRR4, ADR2 | Disease resistance protein ... 390 6e-108 AT1G56540.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 374 6e-103 AT1G66090.1 | Symbols: | Disease resistance protein (TIR-NBS c... 231 4e-60 > AT1G56510.1 | Symbols: WRR4, ADR2 | Disease resistance protein (TIR-NBS-LRR class) | chr1:21167589-21173632 FORWARD LENGTH=3657 Length=3657 Score = 390 bits (211), Expect = 6e-108 Identities = 363/435 (83%), Gaps = 15/435 (3%) Strand=Plus/Plus Query 20 ATTCAAGTGTGATGAAACAAAGGCTAGACGACCAGAGGGTTCTTATTATTCTTGATGATG 79 ||| ||||||||| ||| | |||||| | ||| ||| ||||||||| ||||||||||||| Sbjct 951 ATTTAAGTGTGATAAAAGATAGGCTACAAGACAAGAAGGTTCTTATCATTCTTGATGATG 1010 Query 80 AGGAGAGTCTATTTCCACTAGAGGCTTTGGTC-GATATTACGTGGTTTGGTCCTGGAAGT 138 ||||||| || || ||| ||| |||||| | ||||| ||||||||||||||||||||| Sbjct 1011 TGGAGAGTTTAGCTCAACTTGAGACTTTGG-CTGATATGACGTGGTTTGGTCCTGGAAGT 1069 Query 139 AGGGTCATAGTTACAATTGAAAAACAAA-AGATTTTGGAGCAACATGGTATCAATGATAT 197 ||||||||||| || | |||||| |||| |||||||| |||||||||||||| |||||| Sbjct 1070 AGGGTCATAGTAACGACTGAAAA-CAAAGAGATTTTGCAGCAACATGGTATCGGTGATAT 1128 Query 198 ATACCAAGTGGGGTTTCCATCAGAAAGAGAAGCTCTAAAGATCTTTTGTCTATCTGCTTT 257 ||||||||| || | |||||||||||| ||||| |||| |||||| |||||||||||||| Sbjct 1129 ATACCAAGTTGGATATCCATCAGAAAGCGAAGCACTAACGATCTTCTGTCTATCTGCTTT 1188 Query 258 TAGGCAAACCTTTCCACCTAATGTGTTTATAGCTCTTGCGGATGAAGTTGCAAGTAATT- 316 || ||| ||| ||||||| ||| |||||| | ||||||||||||||||| ||| |||| Sbjct 1189 TAAACAAGCCTCTCCACCTGATGGGTTTATGGATCTTGCGGATGAAGTTGTAAG-AATTT 1247 Query 317 GTGGCAATCTTCCGTTGGGTCTACATGTTTTAGGGACGTCATTGC-GAGGAAAGAGCCAG 375 ||| || ||||| |||| ||| |||||||||| ||||||||| | | |||||||||| Sbjct 1248 GTGATAAGCTTCCATTGGCTCTGTGTGTTTTAGGGTCGTCATTGCTGCG-AAAGAGCCAG 1306 Query 376 GCTGATTGGATAG-ATAAACTACCAAGGTT-AGAAAACTGTCTTGATGCAAGAACTGAGA 433 |||| ||| || || |||| |||||||| ||||| ||||||||| | ||| ||||| Sbjct 1307 ACTGACTGGG-AGGATGAACTGCCAAGGTTGAGAAA-CTGTCTTGACG---GAATTGAGA 1361 Query 434 GTGTAGTGAAAGTGG 448 ||||| ||||||||| Sbjct 1362 GTGTATTGAAAGTGG 1376 > AT1G56540.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr1:21181664-21185306 FORWARD LENGTH=3291 Length=3291 Score = 374 bits (202), Expect = 6e-103 Identities = 351/420 (84%), Gaps = 22/420 (5%) Strand=Plus/Plus Query 40 AGGCTAGACGACCAGAGGGTTCTTATTATTCTTGATGATGAGGAGAGTCTATTTCCACTA 99 |||||| ||||||||| ||||||||| ||||||||||||| |||||||||| || ||| Sbjct 862 AGGCTACACGACCAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTCTAGATCAACTT 921 Query 100 GAGGCTTTGGTC-GATAT-TACGTGGTTTGGTCCTGGAAGTAGGGTCATAGTTACAATTG 157 || ||||||| | |||| | |||||||||||||||||||||||||||||| || | || Sbjct 922 GATGCTTTGG-CTAATATCGA-GTGGTTTGGTCCTGGAAGTAGGGTCATAGTGACCACTG 979 Query 158 AAAAACAAA-AGATTTTGGAGCAACATGGTATCAATGATATATACCAAGTGGGGTTTCCA 216 |||| |||| ||||||| ||||||||||||||| |||||||||||| ||||| |||||| Sbjct 980 AAAA-CAAAGAGATTTTACAGCAACATGGTATCAGTGATATATACCACGTGGGTTTTCCA 1038 Query 217 TCA-GAAAGAGAAGCTCTAAAGATCTTTTGTCTATCTGCTTTTAGGCAAAC-CTTTCCAC 274 ||| | || ||||||| ||| ||||||||||||||| |||||||| ||| | || ||||| Sbjct 1039 TCAAGTAA-AGAAGCTTTAATGATCTTTTGTCTATCCGCTTTTAGACAA-CTCTCTCCAC 1096 Query 275 CTAAT-GTGTTTAT-AGCTCTTGCGGATGAAGTTGCAA-G-TAATTGTGGCAATCTTCCG 330 || || | |||||| | |||||| | ||||||||||| | | |||||| ||||||| Sbjct 1097 CTGATCG-GTTTATGAA-TCTTGCTGCTGAAGTTGCAAAGCT--TTGTGGTTATCTTCCA 1152 Query 331 TTGGGTCTACATGTTTTAGGGACGTCATTGCGAGGAAAGAGCCAGGCTGATTGGATAGAT 390 |||| ||| |||||||||||| | |||||||| ||||||| | | |||| |||||||| Sbjct 1153 TTGGCTCTGCATGTTTTAGGGTCATCATTGCGGGGAAAGAACTATTCTGACTGGATAGA- 1211 Query 391 A-AACTACCAAGGTTAGAAAACT-GTCTTGATGCAAGAACTGAGAGTGTAGTGAAAGTGG 448 | |||||||||| || | ||||| ||||||||| ||||| |||||||||| ||||||||| Sbjct 1212 AGAACTACCAAGATT-GCAAACTTGTCTTGATGGAAGAATTGAGAGTGTATTGAAAGTGG 1270 > AT1G66090.1 | Symbols: | Disease resistance protein (TIR-NBS class) | chr1:24602146-24604763 FORWARD LENGTH=1555 Length=1555 Score = 231 bits (125), Expect = 4e-60 Identities = 264/328 (80%), Gaps = 22/328 (7%) Strand=Plus/Plus Query 38 AAAGGCTAGACGACCAGAGGGTTCTTATTATTCTTGATGATGAGGA-GAGTCTATTTCCA 96 |||||||| ||||||||||||||||||| ||||||||||| | || ||||||| | | Sbjct 971 AAAGGCTACACGACCAGAGGGTTCTTATCATTCTTGATGACG-TGACGAGTCTAGAGCAA 1029 Query 97 CTAGAGGCTTTGGTC-GATATTACGTGGTTTGGTCCTGGAAGTAGGGTCATAGTTA-CAA 154 ||||||| ||||| | |||| | ||||| |||||||||||||||| ||||||| | | | Sbjct 1030 CTAGAGGTTTTGG-CTAATATCAAGTGGTATGGTCCTGGAAGTAGGATCATAGTAATC-A 1087 Query 155 TTGAAAAACAAA-AGATTTTGGAGCAACATGGTATCAATGATATATACCAAGTGGGGTTT 213 | ||||| ||| | ||||||| ||||||||||||| |||||||||||| ||||| ||| Sbjct 1088 CT-AAAAAGAAAGATATTTTGGTGCAACATGGTATCTGTGATATATACCATGTGGGTTTT 1146 Query 214 CCATCAGAAAG-AGAAGCTCTAAAGATCTTTTGTCTATCTGCTTTTAGGCAAACCTTTCC 272 ||| ||| | | ||| |||||||||||||||||||||||||||| ||| ||||||| ||| Sbjct 1147 CCAACAG-ATGCAGATGCTCTAAAGATCTTTTGTCTATCTGCTTATAGACAAACCTCTCC 1205 Query 273 ACCTAATGTGTT-TAT-AGC-T-CTTGCG-GATGAA--GTTGC-AAGTAATT-GTGGCAA 323 |||| ||| | | ||| | | | || | | |||| ||| || |||| ||||||| Sbjct 1206 ACCTGATG-GATCTATGAAAATTCATGAGTG-TGAAATGTTTATAAA-AATTTGTGGCAA 1262 Query 324 TCTTCCGTTGGGTCTACATGTTTTAGGG 351 |||||| ||| |||||||||||| ||| Sbjct 1263 TCTTCCATTGCATCTACATGTTTTGGGG 1290 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26774800351 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5