BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg914953

Length=288
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G44100.1 | Symbols: ATGDI1, AT-GDI1, GDI1 | guanosine nucleo...   171    4e-42


> AT2G44100.1 | Symbols: ATGDI1, AT-GDI1, GDI1 | guanosine nucleotide 
diphosphate dissociation inhibitor 1 | chr2:18241692-18246498 
FORWARD LENGTH=3084
Length=3084

 Score =  171 bits (92),  Expect = 4e-42
 Identities = 104/110 (95%), Gaps = 0/110 (0%)
 Strand=Plus/Plus

Query  119  AGTTTATGATGGCAAATGGAAAGCTTGTTCGTGTCCTTATTCATACAGATGTGACTAAGT  178
            ||||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct  345  AGTTTATGATGGCTAACGGAAAGCTTGTTCGTGTCCTTATTCATACGGATGTGACCAAGT  404

Query  179  ACTTGTCTTTTAAAGCTGTTGATGGAAGCTGTGTTTTTGTCAAAGGCAAG  228
            |||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct  405  ACTTGTCTTTTAAAGCTGTTGATGGAAGCTATGTTTTTGTCCAAGGCAAG  454



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 13270685736


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5