BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg914989

Length=237
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G33670.1 | Symbols:  | NAD(P)-linked oxidoreductase superfam...   209    8e-54


> AT4G33670.1 | Symbols:  | NAD(P)-linked oxidoreductase superfamily 
protein | chr4:16169523-16171561 REVERSE LENGTH=1222
Length=1222

 Score =  209 bits (113),  Expect = 8e-54
 Identities = 127/134 (95%), Gaps = 0/134 (0%)
 Strand=Plus/Plus

Query  80   AGTCTGCATGCAAAGCCGCAGTTGTTCACTGCAAATCAAAGGGTAAGAAAATCACAAAGT  139
            |||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||
Sbjct  813  AGTCTGCAAGCAAAGCCGCAGTTGCTCACTGCAAATCAAAGGGCAAGAAGATCACAAAGT  872

Query  140  TAGCTCTGCAATACAGTTTAGTAAACAAGGAGATTTCATCGGTGTTGATTGGGATGAGCT  199
            ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct  873  TAGCTCTGCAATACAGTTTAGCAAACAAGGAGATTTCGTCGGTGTTGGTTGGGATGAGCT  932

Query  200  CTGTCTCACAGGTA  213
            ||||||||||||||
Sbjct  933  CTGTCTCACAGGTA  946



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10707030537


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5