BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915002
Length=2586
Score E
Sequences producing significant alignments: (Bits) Value
AT1G57650.1 | Symbols: | ATP binding | chr1:21351291-21354311 ... 1110 0.0
AT3G44670.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 752 0.0
AT1G57630.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 617 1e-175
AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 551 1e-155
AT3G03855.1 | Symbols: | pseudogene of disease resistance prot... 263 7e-69
> AT1G57650.1 | Symbols: | ATP binding | chr1:21351291-21354311
FORWARD LENGTH=2130
Length=2130
Score = 1110 bits (601), Expect = 0.0
Identities = 884/1015 (87%), Gaps = 41/1015 (4%)
Strand=Plus/Plus
Query 1068 TGATGAGGCTCTTCAAATGTTCTGCATGTATGCTTTTGGTCAAAAGTCTCCTAAAGACGG 1127
|||||||| ||||||||| ||||||| |||||||||| |||||| | ||| |||| ||
Sbjct 228 TGATGAGGATCTTCAAATCTTCTGCAAGTATGCTTTTAACCAAAAGACCCCTGAAGATGG 287
Query 1128 TTTTTATGAACTTGCTCGTGAAATTACATATCTTGTCGGTGAACTTCCTTTAGGACTAAG 1187
||| ||||||| ||||||||||||||||| | ||||||||||||||| ||||||||||
Sbjct 288 TTTCGATGAACTAGCTCGTGAAATTACATACCATGTCGGTGAACTTCCGTTAGGACTAAA 347
Query 1188 GGTTATTGGATCCCACTTTCGTGGATTGTCCAAGGAGCAGTGGTCAATGGAAATATCAAG 1247
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 348 GGTTATTGGATCCCACTTTCGTGGATTGTCCAAGGAGCAGTGGCCAATGGAAGTATCAAG 407
Query 1248 GTTAAGGAC-TAACCTTGATGGAGATATTGAGAGCATTTTGAAGTTCAGTTTTGATGCTT 1306
||||||||| | ||| | |||||||||||||| |||||||||||||||||| ||||||||
Sbjct 408 GTTAAGGACGT-ACCGTAATGGAGATATTGAGCGCATTTTGAAGTTCAGTTATGATGCTT 466
Query 1307 TATGTGATGAAGATAAAGATTTATTCCTTCATATAGCTTGTTTTTTCAACCA-CGAAAAT 1365
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct 467 TATGTGATGAAGATAAAGATTTATTCCTTCATATAGCTTGCTTTTTCAA-CATGGAAAAA 525
Query 1366 ATAAAC-AAA-TTAGAAGAA-TTTATTGGCCAAAGATTCAAGGATTTGAGTCAAAGGCTT 1422
|| ||| ||| | | ||||| ||| ||||||| ||||||||||||||||| ||||| |||
Sbjct 526 AT-AACGAAAGTGA-AAGAACTTT-TTGGCCACAGATTCAAGGATTTGAGACAAAGCCTT 582
Query 1423 TACGTTTTAGAGGA-GAAATCTCTCATATCTATTG-A-A-A-T-AT-TT---G-TT--GA 1469
|| ||||||| || ||||||||| |||||||||| | | | | || || | || ||
Sbjct 583 CACATTTTAGA-GATGAAATCTCTTATATCTATTGAACATACTGATCTTGAAGATTCCGA 641
Query 1470 ATA-TGTGAGT--ATAAAAATGCACAATTTGCTGGCCCAACTAGGTAAAGAAATCGTCCG 1526
|| | ||||| ||||| |||| || ||||||| |||||||||| |||||||||||||
Sbjct 642 GTATTATGAGTCCATAAACATGCGTAACTTGCTGGTCCAACTAGGTCAAGAAATCGTCCG 701
Query 1527 TAAAGAAT-C--TCGTGAGCCTGGGCAACGCCAATTTTTGTTTGATTATAAAGATATTTG 1583
|||||||| | || ||||||||| ||||||| ||||||| |||||||||||||||||||
Sbjct 702 TAAAGAATCCGTTCTTGAGCCTGGTCAACGCCGATTTTTGATTGATTATAAAGATATTTG 761
Query 1584 TGAAGTAGTCTCTGGTTATACAACTAA-TACTGGAAGTGTTGTAGGCATAGACTCCAATT 1642
|| ||||||||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct 762 TGCAGTAGTCTCTGGTCATACAAC-AATTACTGGAAGTGTTGTAGGCATAGACTCCAAGA 820
Query 1643 ATGGGTTAAATATAACTGAGAAAGCCTTTGAAGGAATGCCTAATCTCCAGTTCTTAAGAG 1702
|| |||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 821 ATTGGTTAAGTATAACTGAGAAATCCTTTAAAGGAATGTCTAATCTCCAGTTCTTAAGA- 879
Query 1703 TCGTCGTATACAATTT-TGATCATCCAAACATTATATCTTCTTCGGGACCTCTGACTTTT 1761
||| | || |||| | ||||||||||||||||||||||| |||||||||||||||||
Sbjct 880 --GTCAAAAACGATTTAT-ATCATCCAAACATTATATCTTCTCCGGGACCTCTGACTTTT 936
Query 1762 ATATCTTCGAAGCTACGATTAATAGAGTGGTGGTATTTTCCGATGACATCTTTCCCTTTT 1821
||||| |||||||||||||| |||| |||| || ||| |||||||||||||| | ||||
Sbjct 937 ATATCCCCGAAGCTACGATTACTAGATTGGTCGTGTTTCCCGATGACATCTTTGCGTTTT 996
Query 1822 ATTAATAATCTGGAATTCCTTGTCGAATTAAAAATGCCTTACAGCAAGCTTGAGAAGCTG 1881
||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||
Sbjct 997 ATTAATAATCTGGAATTCCTTGTCGAATTAAGGATGTGTTACAGCAAACTTGAGAAGCTG 1056
Query 1882 TGGGACGGAAT-CAAACTGCTTCGAAATCTCAAGCGTATGGATTTGGCAAATTCT-GAAA 1939
||||||||||| ||| ||| || |||||||||||| |||||||||| || ||||| ||||
Sbjct 1057 TGGGACGGAATTCAA-CTGGTTAGAAATCTCAAGCATATGGATTTGACAGATTCTAGAAA 1115
Query 1940 ACCTGAAGGAGCTTCCTAATCTCTCAATGGCCACTAGTCTTGAGGAGTTAAACCTTGAAG 1999
|||||||||||||||||||||||||||||| |||| |||| || | ||||||||||||
Sbjct 1116 -CCTGAAGGAGCTTCCTAATCTCTCAATGGCTACTAATCTTAAGAATTTAAACCTTGAAA 1174
Query 2000 GATGTTCAAGTCTGGTGGAGCTCCCTTCTTCTATTGGGAATTTAACTAATCTCCA 2054
|||||||||||||||||||||| ||||| |||||||| ||| ||||| ||||||
Sbjct 1175 GATGTTCAAGTCTGGTGGAGCTTCCTTCCTCTATTGGAAATGCAACTAGTCTCCA 1229
Score = 383 bits (207), Expect = 5e-105
Identities = 278/311 (89%), Gaps = 10/311 (3%)
Strand=Plus/Plus
Query 2277 ATGCTCAAGGCTTGTATCACTCCCACAGCTTCCAGATTCCCTAATGGTCCTAAATGCACA 2336
||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 1320 ATGTTCAAGTCTTGTATCACTCCCGCAGCTTCCAGATTCCATAATGGTCCTAAATGCACG 1379
Query 2337 AAATTGTGAGTCCCTAGAGAAACTAGATTGCTCC-TTTAGCAATCCGGGTACTT-GGCTT 2394
|||||| ||||||||||||||||||||||||||| |||| |||||| |||| || ||
Sbjct 1380 AAATTGCGAGTCCCTAGAGAAACTAGATTGCTCCTTTTA-CAATCCAGGTA-TTCTTCTC 1437
Query 2395 AACTTTTC-TT-ACTGCTTCAAACTAAATAAAGAAGCAAGAGATCTCCTCATCCAGACAT 2452
||| ||| || |||||||||| |||||| ||||||||||||||||||||||| ||||||
Sbjct 1438 AAC--TTCGTTAACTGCTTCAACCTAAATCAAGAAGCAAGAGATCTCCTCATCGAGACAT 1495
Query 2453 CACCTGTTAACGTTGTGGTCTTACCCGGTAAAGAAGTGCCTGCGTGCTTCACTTACAGAG 2512
|| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1496 CAACTGTTAATTTTGTGGTCTTACCTGGTAAAGAAGTGCCTGCGTGCTTCACTTACAGAA 1555
Query 2513 GTTATGGGAGTTCCGTAACAGTGAAG-TTGAATCAAAAGCCTCTTCCTACATCAACCAAA 2571
|| |||||||||||||| |||||||| || |||||||||| ||||| ||| |||||||||
Sbjct 1556 GTCATGGGAGTTCCGTATCAGTGAAGGTT-AATCAAAAGCTTCTTCATACGTCAACCAAA 1614
Query 2572 TTTAAGGCTTG 2582
|||||||||||
Sbjct 1615 TTTAAGGCTTG 1625
Score = 327 bits (177), Expect = 2e-88
Identities = 245/277 (88%), Gaps = 8/277 (3%)
Strand=Plus/Plus
Query 2001 ATGTTCAAGTCTGGTGGAGCTCCCTTCTTCTATTGGGAATTTAACTAATCTCCAGAAATT 2060
|||||| ||||||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct 1248 ATGTTCTAGTCTGGTGGAGCTCCCTTTTTCAATTGGGAATTTAACTAATCTTTGGAAATT 1307
Query 2061 ATCA-CTT-GAAGGATGCTCAAGGCTTGTATCACTCCCACAGCTTCCAGATTCCCCAATG 2118
| | ||| | | ||| ||||| |||||||||||||| ||||||||||||||| ||||
Sbjct 1308 A-GATCTTCG-TGAATGTTCAAGTCTTGTATCACTCCCGCAGCTTCCAGATTCCATAATG 1365
Query 2119 GTCCTAGATGCA-GAAAATTGTGAGTCCCTAGAGAAACTAGATTGCTCCTTTTGCAATCC 2177
|||||| ||||| | |||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1366 GTCCTAAATGCACG-AAATTGCGAGTCCCTAGAGAAACTAGATTGCTCCTTTTACAATCC 1424
Query 2178 ATGTATTCATCTCAACTTCGCTAACTGCTTCAAACTAAATCAAGAAGCAAGAGATCTCCT 2237
| |||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 1425 AGGTATTCTTCTCAACTTCGTTAACTGCTTCAACCTAAATCAAGAAGCAAGAGATCTCCT 1484
Query 2238 CATCCAGACATCAACTGCTAGATTG-GTGGTCTTACC 2273
|||| |||||||||||| || ||| |||||||||||
Sbjct 1485 CATCGAGACATCAACTGTTA-ATTTTGTGGTCTTACC 1520
Score = 121 bits (65), Expect = 4e-26
Identities = 71/74 (96%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 716 TTTCCAGCCGTTTCCAGAATAGCGCACTCATCGAGGATATCAAAGGAAGCTATCCGAAAC 775
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 161 TTTCCAGCCGTTTCCAGAATAGCGCAGTCATCGAGGATATCAAAGGAAGCTATCCAAAAC 220
Query 776 CTTGTTTTGATGAG 789
|| |||||||||||
Sbjct 221 CTCGTTTTGATGAG 234
> AT3G44670.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16216950-16221617 FORWARD LENGTH=3965
Length=3965
Score = 752 bits (407), Expect = 0.0
Identities = 1151/1499 (77%), Gaps = 96/1499 (6%)
Strand=Plus/Plus
Query 10 tcttcttctttatcgctttcatttccttcttcttctttGTCTCAAACCTGGGAACACGAT 69
|||||| ||||||| ||| ||| |||| | |||| |||||| || |||| ||||| |
Sbjct 339 TCTTCTGCTTTATCTCTTCCATCTCCTCCAACTTCAGTGTCTCGAATCTGGAAACACCAC 398
Query 70 GTCTTTCCC-AGCTTCCA-TGGGAAGGATGTACGCAAAGCCTTTCTCAGCCACATTCTC- 126
||| ||||| |||||||| ||| | ||||| || ||| || |||| || ||||| |||
Sbjct 399 GTC-TTCCCGAGCTTCCACGGGGCA-GATGTTCGAAAAACCATTCTTAGTCACATCCTCG 456
Query 127 AAGGAGTTTGGAAGAAAAGCAATCAACTTTTTTGTTGATAACGAGATCA-AGAGAGGAG- 184
|| ||| ||||||| | ||| || ||| ||||||| | || | |||||||||
Sbjct 457 AA-TCGTTCAGAAGAAAGGGAATTGACCCATTTATTGATAA-TA-AT-ATAGAGAGGAGT 512
Query 185 AATTC-ATCGGTCCTGAACTCAAACG-GGCGATCAAAGGATCTAAGATTGCTCTTGTCTT 242
|| || ||||||| ||| |||||| | || ||||||||||| ||||| || | |||||
Sbjct 513 AAGTCGATCGGTCATGAGCTCAAA-GAAGCTATCAAAGGATCAAAGATCGCGATCGTCTT 571
Query 243 GCTCTCCAAGAATTATGCTTCTTCGTCGTGGTGTCTTGACGAATTGGCGGAGATAATGAA 302
|||||| ||||| ||||||||||| || ||||| ||||| ||||| || || || |||||
Sbjct 572 GCTCTCAAAGAACTATGCTTCTTCATCTTGGTGCCTTGATGAATTAGCAGAAATCATGAA 631
Query 303 --GCA-AG-A--GTCGGGTCAAACGGTGATTACCATTTTCTATGAAGTAGATCCAACGGA 356
| | | | || |||||| | || || || |||||||||||||| |||||||| ||
Sbjct 632 GTGTAGGGAATTGTTGGGTCAGATAGTCATGACTATTTTCTATGAAGTGGATCCAACTGA 691
Query 357 TGTGAAGAAGCAGAAGGGAGACTTTGGGAAGGTCTTCaaaaaaaCTTGTAAAGGTAAAGA 416
| ||||| |||| || || ||||| || | ||||| |||||| |||||||||||| |
Sbjct 692 CATAAAGAAACAGACCGGTGAATTTGGAAAAGCCTTCACAAAAACATGTAAAGGTAAA-A 750
Query 417 C-AAGGAG-AAGATTAAGACTTGGAGGAAAGCTTTGGAGGATGTGGCCACAATCGCAGGT 474
| || ||| | | || ||| ||||| ||||||||||||||||||||||||||||| ||
Sbjct 751 CAAAAGAGTATG-TTGAGAGATGGAGAAAAGCTTTGGAGGATGTGGCCACAATCGCCGGA 809
Query 475 TACCATTCAAGCAACTGG-GTTGA-TGAAGCAGCCATGATTGA-AAACATCGCTGCTGAA 531
| ||||| |||||||| | || |||||||| ||||||||| ||| || || ||||
Sbjct 810 GAACATTCTCGCAACTGGAG--GAATGAAGCAGACATGATTGAGAAA-ATAGCCACTGAT 866
Query 532 ATTTCGAACAAGCTTAA-TCA-TTTGACACCATCACGTGATTTTGACTGTTTAATTGGGA 589
|||| |||| | |||| | | ||| ||||||||| | ||||| ||| | ||| | ||||
Sbjct 867 GTTTCAAACATG-TTAAAT-AGTTTCACACCATCAAGAGATTTCGACGGGTTAGTAGGGA 924
Query 590 TG-GAAGCTCATATGAAAAGGATGGAACAGTAT-TTACGTCTAGACTTGGATGAAGTGAG 647
|| || ||||||||| | | | ||||||| | | || || ||||| ||||||||||| ||
Sbjct 925 TGAGA-GCTCATATGGATATGCTGGAACAAT-TGTTGCGCCTAGATTTGGATGAAGTAAG 982
Query 648 GATGATTGGGATTTGGGGTCCGGCTGGGATCGGGAAGACCACCATCGCCAGGTTTCTGTT 707
|||||| ||||||||||| ||| ||||||| || ||||| || |||||||| ||||||||
Sbjct 983 GATGATCGGGATTTGGGGACCGCCTGGGATTGGTAAGACAACTATCGCCAGATTTCTGTT 1042
Query 708 TAACCAAGTTTCCAGCC-GTTTCCAGAAT-AGCGC-ACTCATCGAGGATATCAAAGGAAG 764
||| ||||| ||| | | | ||||| | | || || | |||| | | |||||| |||||
Sbjct 1043 TAATCAAGTCTCC-GACAGATTCCA-ACTTAGTGCCA-TCATTGTGAATATCAGAGGAAT 1099
Query 765 CTATCCGAA-ACCTTGTTTTGATGAGTACAACGCA-AAGTTGCAACTACAAAATAAAATG 822
|||||| || ||||||||| |||||||||| ||| || |||||||||||||| |||||
Sbjct 1100 CTATCC-AAGACCTTGTTTCGATGAGTACAGTGCACAA-TTGCAACTACAAAACCAAATG 1157
Query 823 TTGTCTCAGATGATCAACCAGAAAGATATCATGATCCCTCATTTAGGAGTCGCACAAGAA 882
||||| ||||||||||| || |||||||||||||| ||||||||||||| || ||||||
Sbjct 1158 TTGTCCCAGATGATCAATCATAAAGATATCATGATTTCTCATTTAGGAGTGGCTCAAGAA 1217
Query 883 CGATTGAGAAATAGGAACGTGTTTCTCGTTCTTGATGATGTGGATCGGTTAGCACAAGTA 942
|| |||||| | | ||| |||||||| ||||| ||||| ||||||| |||| |||| ||
Sbjct 1218 CGGTTGAGAGACAAGAAAGTGTTTCTTGTTCTCGATGAAGTGGATCAATTAGGACAACTA 1277
Query 943 CAAGCCTTGGCCAAC-AATGTTC-AGTGGTTTGGTCCTAGAAGTCGGATTATCATCACAA 1000
| |||||||| || || | | | |||||||||||| ||||||||||||| |||||||
Sbjct 1278 GATGCCTTGGCGAAAGAAACT-CGA-TGGTTTGGTCCTGGAAGTCGGATTATTATCACAA 1335
Query 1001 CAGAAGATCGAAGTCTTTTGAACGCACATGGGATCAACCATATATACAAGGTTGGTTT-T 1059
||||||||| | | ||||||| || |||||||| || ||| | ||||| || | | |
Sbjct 1336 CAGAAGATCTAGGAGTTTTGAAGGCTCATGGGATAAATCATGTTTACAAAGT-GAAATAT 1394
Query 1060 CCATCAAATGATGAGGCTCTTCAAATGTTCTGCATGTATGCTTTTGGTCA-AAAGTCTCC 1118
||||||||||| |||||| ||||||| ||||| ||| |||| |||||||| ||| ||
Sbjct 1395 CCATCAAATGACGAGGCTTTTCAAATCTTCTGTATGAATGCCTTTGGTCAGAAACAA-CC 1453
Query 1119 TAAA-GACGGTTTTTATGA-ACTTGC-TCGTGAAATTACATATCTT--G-TCGGTGAACT 1172
| | || ||||| |||| | |||| | | ||| ||| | ||| | | ||||||||
Sbjct 1454 -ACATGAAGGTTTCGATGAGA-TTGCATGG-GAAGTTA--TGGCTTTAGCT-GGTGAACT 1507
Query 1173 TCCTTTAGGACT-AAGGGTTATTGGATCCCACTTT-CGTGG-ATTGTCCAAGG-AGCAGT 1228
||||| ||| | |||| || | || || |||| || || | ||||||| || |||
Sbjct 1508 CCCTTTGGGATTGAAGG-TTCTAGGCTCTG-CTTTGCGGGGGAA-GTCCAAGCCAG-AGT 1563
Query 1229 GGTCAATGGAA-A-TATCAAGGTTAAGGACTAACCTTGATGGAGATATTGAGAGCATTTT 1286
|| || | || | || ||||||||| |||| ||| || ||| |||| | ||||||| |
Sbjct 1564 GGGAAA-G-AACACTACCAAGGTTAAAAACTAGCCTCGACGGAAATATCGGGAGCATTAT 1621
Query 1287 GA-AGTTCAGTTTTGATG-CTTTATGTGATGAAGATAAAGATTTA-TTCCTTCATATAGC 1343
| ||||||||| |||| ||| |||||| ||||||||| || | ||| || |||||||
Sbjct 1622 -ACAGTTCAGTTACGATGGCTT-ATGTGACGAAGATAAATATCTCCTTCTTT-ATATAGC 1678
Query 1344 TTGT-TTTTTCAACCACGAAA-ATATAAACAAATTAGAAGAATTTATTGGCCAA-A-GAT 1399
|| ||||| ||| ||||| | | || |||| | ||||| || ||| | || | | |
Sbjct 1679 CTGCCTTTTT-AACTACGAATCA-ACAACCAAAGTGGAAGAGGTTCTTG-CAAACAAG-T 1734
Query 1400 TCAAGGATTTGAGTCAAAGG-CTTTACGTTTTAGAGGAGAAATCTCTCATATCTATTGA 1457
|| |||| ||| ||| || ||| |||| |||| |||||||||||||||| |||||
Sbjct 1735 TCTTGGATGTGAAACAA-GGTCTTCACGTATTAGCTCAGAAATCTCTCATATCCATTGA 1792
> AT1G57630.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain
family protein | chr1:21345639-21346157 FORWARD LENGTH=519
Length=519
Score = 617 bits (334), Expect = 1e-175
Identities = 449/503 (89%), Gaps = 13/503 (3%)
Strand=Plus/Plus
Query 1 ATGGcttcttcttcttctttatcgctttcatttccttcttcttctttGTCTCAAACCTGG 60
||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct 1 ATGGCTTCTTCTTCTTCTTTATCTCTTTCATTTCCTTCATCTTCTTTGTCTCGAACCTGG 60
Query 61 GAACACGATGTCTTTCCCAGCTTCCA-TGGGAAGGATGTACGCAAAGCCTTTCTCAGCCA 119
|| ||||||| ||||| ||||| || ||||| ||||||||||||||||||||||||||
Sbjct 61 GATTACGATGTTTTTCCGAGCTTTCACGGGGAA-GATGTACGCAAAGCCTTTCTCAGCCA 119
Query 120 CATTCTC---AAGGAGTTTGGAAGAAAAGCAATCAACTTTTTTGTTGATAACGAGATCAA 176
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 120 GATTCTCAAGAAGGAGTTTGGAAGAAAAGCAATCAACTTTTTTGTTGATCACGAGATGGA 179
Query 177 GAGAGGAGAATTCATCGGTCCTGAACTCAAACGGGCGATCAAAGGATCTAAGATTGCTCT 236
||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 180 GAGAGGAGAGTTCATCGGTCCTGTACTCAAACAGGCGATCAAAGGATCTAAGATTGCTCT 239
Query 237 TGTCTTGCTCTCCAAGAATTATGCTTCTTCGTCGTGGTGTCTTGACGAATTGGCGGAGAT 296
||||||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||
Sbjct 240 TGTCTTGCTCTCCAAGAATTACGCTTCTTCGTGGTGTTGTCTTGACGAATTGGTGGAGAT 299
Query 297 AATGAAGCAAGAGTCGGGTCAAACGGTGATTACCATTTTCTATGAAGTAGATCCAACGGA 356
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 300 CATGAAGAAAGAGTCGGGTCAAACGGTGATTACCATTTTCTATGAAGTTGATCCAAATGA 359
Query 357 TGTGAAGAAGCAGAAGGGAGACTTTGGGAAGGTCTTCaaaaaaaCTTGTAAAGGTAAAGA 416
|| |||||||||| ||||| |||||||||| ||||||| |||||||| |||||||| |
Sbjct 360 AGTAAAGAAGCAGACCGGAGATTTTGGGAAGGCCTTCAAAGAAACTTGTCAAGGTAAA-A 418
Query 417 CA-AGGAGAAGATTAAGACTTGGAGGAAAGCTTTGGAGGATGTGG------CCACAATCG 469
| |||| ||| || |||| ||||||||||||||||||| ||||| |||||||||
Sbjct 419 CTGAGGAAAAGGTTCAGACATGGAGGAAAGCTTTGGAGGGTGTGGGTTTGGCCACAATCG 478
Query 470 CAGGTTACCATTCAAGCAACTGG 492
|||||| |||||||||||||||
Sbjct 479 CAGGTTTTCATTCAAGCAACTGG 501
> AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:15320507-15324061 FORWARD LENGTH=3180
Length=3180
Score = 551 bits (298), Expect = 1e-155
Identities = 1081/1445 (75%), Gaps = 110/1445 (8%)
Strand=Plus/Plus
Query 65 ACGATGTCTTTCCCAGCTTCCATGG-GAAGGATGTACGCAAAGCCTTTCTCAGC-CACAT 122
||||||||||||| || ||||| || | | ||||| |||||| ||||||| | |||||
Sbjct 170 ACGATGTCTTTCCGAGTTTCCACGGAGCA-GATGTTCGCAAAACCTTTCT-TTCTCACAT 227
Query 123 TCTCAAGGAGTTTGGAA-GAAAAGCAATCAACTT--TTTTGTTGATAACGAGATCAAGAG 179
|| || ||| || || |||| | |||| || || ||||||| || ||| ||
Sbjct 228 GCTAAAAGAG-TTCAAACGAAAGGGAATC--GTTCCATTCATTGATAATGATATC--GAC 282
Query 180 AGGAG-AATTC-ATCGGTCCTGAACTCAAACG-GGCGATCAAAGGATCTAAGATTGCTCT 236
||||| || || || |||||||| ||| ||| || |||| |||||| ||||| || |
Sbjct 283 AGGAGCAAGTCTATTGGTCCTGAGCTC-GACGAAGCTATCAGAGGATCAAAGATCGCAAT 341
Query 237 TGTCTTGCTCTCCAAGAATTATGCTTCTTCGTCGTGGTGTCTTGACGAATTGGCGGAGAT 296
||| ||||||| ||||| ||||||||||| || ||||| || |||| |||| ||||||
Sbjct 342 CGTCATGCTCTCAAAGAACTATGCTTCTTCATCATGGTGCCTAAACGAGTTGGTGGAGAT 401
Query 297 -----AATGAAG-CAAGAGTCGGGTCAAACGGTGATTACCATTTTCTATGAAGTAGATCC 350
|||| || |||| | | |||||| ||||| ||||||||||||| || || ||
Sbjct 402 CACGAAATGTAGAAAAGATTTGAATCAAACAGTGATGACCATTTTCTATGGCGTTGACCC 461
Query 351 AACGGATGTGAAGAAGCAGA-AGGGAGACTTTGGGAAGGTCTTCaaaaaaaCTTGT-AAA 408
||| ||||| |||||||||| | ||||| ||||||||||||||| ||| ||||||| |||
Sbjct 462 AACAGATGTAAAGAAGCAGACA-GGAGAGTTTGGGAAGGTCTTCGAAAGAACTTGTGAAA 520
Query 409 GGTAAAGACA-AGGAGAAGATTAAGACTTGGAGGA-AAGCTTTGGA-GGATGTGGCCACA 465
||||| ||| ||||| || ||||||| |||| || ||| |||||| || || ||| |||
Sbjct 521 -GTAAA-ACAGAGGAGCAGGTTAAGACATGGA-GAGAAGTTTTGGATGG-TGCGGCAACA 576
Query 466 ATCGCAGGTTACCATTCAAGCA-A-CTGGGTTGATGAAGC-AGCCATGATTGAAAACATC 522
||||| || | |||| ||| | ||||| | ||||||| || |||||||||||| ||
Sbjct 577 ATCGCTGGAGAGCATT--GGCACATCTGGGATAATGAAGCGAG-CATGATTGAAAAAATT 633
Query 523 GCTGCTGAAATTTCGAACAAGCTTAATCATTTGACACCATCACGTGATTTTGACTG-TTT 581
| ||| |||| |||| ||||||| || |||| ||| | ||||||||| | |||
Sbjct 634 TCCATTGACGTTTCAAACATTCTTAATCGTTCCTCACCCTCAAGAGATTTTGAC-GATTT 692
Query 582 AATTGGGATGGAAGCTCATAT-GAAAAGGATGGAA-CAG-TATTTACGTCTAGACT-TGG 637
|||||||||||||||||||| ||||| ||| || | | | || | | ||| ||| |
Sbjct 693 GATTGGGATGGAAGCTCATATGGAAAA-AATGAAATC-GTTGTTGA-GCCTACACTCT-A 748
Query 638 ATGAAGTGAGGATGATTGGGATTTGGGGTCCGGCTGGGATCGGGAAGACCACCATCGCCA 697
||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| || |
Sbjct 749 ATGAAGTGAAGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACCACCATTGCAA 808
Query 698 G-GTTTCTGTTTAACCAAG-TTTCCAGCCG-TTTCCAGAAT-AGCGCAC-TCATCGAGGA 752
| || | | | ||||| | ||| | | || ||| || | || | | | || || |
Sbjct 809 GAGTCT-TATATAACC--GTTTTTCTGGCGATTT-TGGATTGAGTG-TCTTTATGGACAA 863
Query 753 TA-TCAA-AG--GAAGCTATCCGAA-ACC--T-TGTTTTGATGAGTACAACGCAAAGTTG 804
|| | || || || || || | || ||| | ||| ||| || |||| |||||||||
Sbjct 864 TATTAAAGAGTTGATGC-ATAC-AAGACCAGTGGGTTCTGACGATTACAGTGCAAAGTTG 921
Query 805 CAAC-TACAAAATAAAATGTTGTCTC-AGATGATCAACCAGAAAGATATCATGATCCCTC 862
| || |||| || | | |||| | |||| | |||||| || || | || ||| |||
Sbjct 922 C-ACTTACAGAACCAGTTAATGTC-CGAGATAACCAACCATAAGGAGACCAAGATTACTC 979
Query 863 ATTTAGGAGTCGCACAAGA-ACGATTG-A-GA-AATAGGAACGTGTTTCTCGTTCTTGAT 918
|||||||||| | || || | | ||| | || |||| || ||| || | || ||||||
Sbjct 980 ATTTAGGAGTTGTACCTGATA-GGTTGAAGGACAATA--AA-GTGCTTATTGTCCTTGAT 1035
Query 919 -G-ATGTGGATCGGTTAGCACAAGTACAAGCCT-TGGCCAACA-ATGTTCAGTGGTTTGG 974
| || | |||| | | |||| || | | || | | ||| | | ||| ||||| ||
Sbjct 1036 AGCAT-T-GATCAATCAATACAACTAGATG-CTATCG-CAAAAGAAACTCAATGGTTCGG 1091
Query 975 TCCTAGAAGTCGGATTATCATCACAACAG-AAGATCGAAGTCTTTTGAACGCACATGGGA 1033
|||| | |||||||||||||||||||| | |||| | || ||| || | ||||||| |
Sbjct 1092 TCCTGGGAGTCGGATTATCATCACAAC-GCAAGACCAAAAACTTCTGGAGGCACATGACA 1150
Query 1034 TCAACCATATATACAAGGTTGG-TTTTCCATC-AAATGATGAGGCTCTTCAAATGTTCTG 1091
||||| |||| ||||||| ||| |||||||| |||| |||| ||| ||||||| || ||
Sbjct 1151 TCAACAATATTTACAAGG-TGGAGTTTCCATCAAAAT-ATGAAGCTTTTCAAATCTTTTG 1208
Query 1092 CATGTATGCTTTTGGTCAAAAGTCT-CCTAAAGACGGTTTTTATGAA-CTTGCTCGTGAA 1149
| |||||||||||||||||| | | |||||||| |||||| | ||| |||||| | |||
Sbjct 1209 TACGTATGCTTTTGGTCAAAA-TTTCCCTAAAGATGGTTTTGA-GAAGCTTGCTTGGGAA 1266
Query 1150 ATTACATATCTTGTCGGTGAACTTCCTTTAGGACTAAGGGTTATTGGATCCCACTTTCGT 1209
||||| | ||| | |||||||| || || |||||||| ||||| || |||||||| ||
Sbjct 1267 GTTACAGACCTTTTAGGTGAACTACCATTGGGACTAAGAGTTATGGGCTCCCACTTCCGA 1326
Query 1210 GGATTGTCCAAGGA-GCAGT-GGTCAATGGAAATATCAAGGTTAAGGACTAACCTTGATG 1267
|| |||| ||||| | | | ||| ||| | | || ||||||||| |||| ||||||||
Sbjct 1327 AGAATGTCTAAGGATG-ATTGGGT-AATTGCATTACCAAGGTTAAAGACTCGCCTTGATG 1384
Query 1268 -GAGATATTGAGAGCATTTTGAAGTTCAGTTTTGATGCTTTATGTGATGAAGATAAAGAT 1326
| ||||| | |||||||||||||| |||| |||||||||| | |||||||||||||
Sbjct 1385 CTA-ATATTCAAAGCATTTTGAAGTTTAGTTACGATGCTTTATCTCCTGAAGATAAAGAT 1443
Query 1327 TTATTCCTTCATATAGCTTGTTTTTTCAACCACGAA-AATATAAACAAATTAGAAGAATT 1385
||||||||||||||||| || |||||||| | ||| || ||| ||| | ||||| ||
Sbjct 1444 TTATTCCTTCATATAGCATGCCTTTTCAACAATGAAGAA-ATAGTGAAAGTCGAAGA-TT 1501
Query 1386 -TATTGGCCAAAGATT-CAAGGATTTGAGTCAAAGGCTTTACGTTTTAGAGGAGAAATCT 1443
| ||| | ||||| | |||| ||| || ||||| || | |||| |||||||||
Sbjct 1502 ATCTTG-CTTTAGATTTCTTGGATGCGAGGCATGGGCTTCACCTCTTAGCTGAGAAATCT 1560
Query 1444 CTCAT 1448
|||||
Sbjct 1561 CTCAT 1565
> AT3G03855.1 | Symbols: | pseudogene of disease resistance protein
| chr3:986948-990738 FORWARD LENGTH=3791
Length=3791
Score = 263 bits (142), Expect = 7e-69
Identities = 351/449 (78%), Gaps = 25/449 (6%)
Strand=Plus/Plus
Query 60 GGA-ACACGATGTCTTTCCC-AGCTTCCATGG-GAAGGATGTACGCAAAGCCTTTCTCAG 116
||| |||||||||| ||||| |||||||| || | | ||||| |||||| | ||||| ||
Sbjct 142 GGATACACGATGTC-TTCCCGAGCTTCCACGGTGCA-GATGTCCGCAAATCGTTTCTGAG 199
Query 117 CCACATTCTCAAGGAGTTTGGAAGAAAAGCAATCAACTTTTTTGTTGATAACGAGATCAA 176
|||| ||| |||||| | |||| |||| ||| |||| || ||||||| || |||
Sbjct 200 TCACACTCTGAAGGAGCTCAGAAGCAAAGGTATCGACTTATTCATTGATAATGATATCTT 259
Query 177 GAGAGGAGAATTCATCGGTCCTGAACTCAAACGGGCGATCAAAGGATCTAAGATTGCTCT 236
|||||||||||| ||||| ||||| |||||| |||||| | ||||| | | | || |
Sbjct 260 GAGAGGAGAATTTATCGGCCCTGAGCTCAAAAAAGCGATCCATGGATCGAGGCTCGCGAT 319
Query 237 TGTCTTGCTCTCCAAGAA-TTATGCTTCTTCGTCGTGGTGTCTTGACGAATTGGCGGAGA 295
|||||||||||| || || || |||||||||||||||||||||||||||||||||||||
Sbjct 320 TGTCTTGCTCTCGAA-AAGATACGCTTCTTCGTCGTGGTGTCTTGACGAATTGGCGGAGA 378
Query 296 TAATGAAG--CAAG-A-G-TCG-GGTCAAACGGTGATTACCATTTTCTATGAAGTAGATC 349
| |||||| |||| | | | |||||||| ||||| |||||||||| ||||| ||||
Sbjct 379 TTATGAAGTGCAAGGAAGCTTTTGGTCAAACAGTGATGGCCATTTTCTACGAAGTGGATC 438
Query 350 CAACGGATGT-GAAGAAGCAGAAGGGAGACTTTGGG-AAGGTCTTCaaaaaaaCTTGTAA 407
|||| ||||| || |||||||| |||| |||||| ||| |||||| | |||||||| |
Sbjct 439 CAACTGATGTAGA-GAAGCAGACCGGAGGTTTTGGGGAAG-TCTTCACAGAAACTTGTGA 496
Query 408 AGGTAAAGACAAG--GAGAAGATTAAGACTTGGAGGAAAGCT-TTGGAGGATGTGGCCAC 464
|||||| ||| | ||| | ||| ||| ||||| ||||| ||| | | ||||| ||
Sbjct 497 GGGTAAA-ACA-GCTGAGGACATTGAGAAATGGAGTCAAGCTCTTGCAAAA-GTGGCAAC 553
Query 465 AATCGC-AGGTTACCATTCAAGCAACTGG 492
|| | || ||||| |||||||| ||||
Sbjct 554 TGTCACTAG-TTACCTTTCAAGCAGCTGG 581
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 128377207137
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5