BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg915005 Length=447 Score E Sequences producing significant alignments: (Bits) Value AT2G41350.2 | Symbols: | unknown protein; BEST Arabidopsis tha... 204 7e-52 AT1G57620.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pr... 195 4e-49 > AT2G41350.2 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:17231341-17233458 FORWARD LENGTH=1124 Length=1124 Score = 204 bits (110), Expect = 7e-52 Identities = 130/140 (93%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 236 AGATGTTACTCAATCATGTTGGCTACTCTCCTAAGATCAGCCACAGAGAGCTGGTAGAAA 295 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 874 AGATGTTACTCAATCGTGTTGGCTACACTCCTAAGATCAGCCACAGAGAGCTGGTAGAAA 933 Query 296 TGGCAAAGCACCGGAAGGAATTGGAGAAGATGGCAAAACCCGTTCTTGATACTCTAAGAA 355 ||||| ||||||||||||||||||| |||||| ||||||| || |||||||||||| ||| Sbjct 934 TGGCAGAGCACCGGAAGGAATTGGACAAGATGACAAAACCAGTCCTTGATACTCTACGAA 993 Query 356 GCTACCAGGACTTGCCTCCG 375 |||||||||| || |||||| Sbjct 994 GCTACCAGGATTTACCTCCG 1013 > AT1G57620.1 | Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr1:21342721-21344804 FORWARD LENGTH=1004 Length=1004 Score = 195 bits (105), Expect = 4e-49 Identities = 121/128 (95%), Gaps = 3/128 (2%) Strand=Plus/Plus Query 73 ATGGCA--GTG-TACACCACAAGGAAAATACAACAAACGGTCAGTTTGCATTTACAACCC 129 |||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 360 ATGGCACCGTGTTACACCACAGGGAAAATACAACAAACGGTCAGTTTGCATTCACAACCC 419 Query 130 AAGAATCAGGAACTTACTTGGCGTGTTTTGAGGCCGATGCCAAAAATCATGGTAACAAAG 189 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 420 AAGAATCAGGAACTTACTTGGCGTGTTTTGAGGCCGATGCTAAAAGTCATGGTAACAAAG 479 Query 190 ATTTTAGC 197 |||||||| Sbjct 480 ATTTTAGC 487 Score = 69.4 bits (37), Expect = 3e-11 Identities = 41/43 (95%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 195 AGCCAAAGATTGGGACTCCATTGCTAGAAAAGAGAAGATCGAG 237 ||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 517 AGCTAAAGATTGGGACTCCATTGCTAGAAAAGAAAAGATCGAG 559 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21263257827 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5