BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg915129 Length=891 Score E Sequences producing significant alignments: (Bits) Value AT4G13080.1 | Symbols: XTH1 | xyloglucan endotransglucosylase/h... 1321 0.0 > AT4G13080.1 | Symbols: XTH1 | xyloglucan endotransglucosylase/hydrolase 1 | chr4:7626612-7628367 REVERSE LENGTH=879 Length=879 Score = 1321 bits (715), Expect = 0.0 Identities = 831/886 (94%), Gaps = 11/886 (1%) Strand=Plus/Plus Query 10 ATGGATTATATTTCAATCTTCGGTTTTGTATCAGTTTTGTATTTGATCATTAGGGTTGAT 69 ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 ATGGAATATCTTTCAATCTTCGGTTTTGTTTCAGTTTTGTATTTGATCATTAGGGTTGAT 60 Query 70 GCTAGGGCTCATGAAGTTCAA-GGAATCGACCAAAACAAAGTAGGTTTCGATGATAATTA 128 ||||||||| |||||||| || ||||||||||||| ||||||||||||||||||||| || Sbjct 61 GCTAGGGCTTATGAAGTT-AATGGAATCGACCAAAGCAAAGTAGGTTTCGATGATAACTA 119 Query 129 TGTCGTTACGTGGGGACAAAATAATATCTTGAAACTTAACCAAGGGAAAGAAGTTCAGCT 188 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 120 CGTCGTTACGTGGGGACAAAATAATGTCTTGAAACTTAACCAAGGGAAAGAAGTTCAGCT 179 Query 189 TTCATTGGATCGTTCTTCAGGTTCTGGTTTTGAATCTAAGAATCATTACGAATCAGGATT 248 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 TTCATTGGATCATTCTTCAGGTTCTGGTTTTGAATCTAAGAATCATTACGAATCAGGATT 239 Query 249 CTTCCAAATAAGAATCAAAGTGCCTCCAAAAGATTCCTCAGGCATTGTCACCGCTTTCTA 308 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 240 CTTCCAAATAAGAATCAAAGTGCCTCCAAAAGATACCTCAGGCGTTGTCACCGCTTTCTA 299 Query 309 TTTGACTTCGAAGGAAAACACCCATGATGAACTTGACATTGAATTCTTGGGAAACAAAGA 368 |||||||||||||| |||||| ||||||||| |||| |||||||||||||||||||||| Sbjct 300 TTTGACTTCGAAGGGAAACACACATGATGAAGTTGATTTTGAATTCTTGGGAAACAAAGA 359 Query 369 AGGGAAACCAATAAG-AGTGCAAACAAATGTGTTTACTAATGGTAAAGG-AGATAGAGAA 426 |||||||| || | ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 360 AGGGAAAC---TA-GCAGTGCAAACAAATGTGTTTACTAATGGTAAAGGCA-ATAGAGAA 414 Query 427 CAGAAGCTAGTTCTCTGGTTCGATCCTACCAAAGATTTCCACACTTACGCAATTCTGTGG 486 |||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 415 CAGAAGTTAGCTCTCTGGTTCGATCCTTCTAAAGATTTCCACACTTACGCAATTCTGTGG 474 Query 487 AACCCGTATCAAATTGTGTTTTATGTGGACAACATTCCAATACGGGTGTTCAAGAACACC 546 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 475 AACCCGTATCAAATTGTGCTTTATGTGGACAACATTCCAGTACGGGTGTTCAAGAACACC 534 Query 547 ACAAGCGAAGGCATGAACTACCCAGCAAAACCTATGCAAGTGGTGGTTAGCTTGTGGAAC 606 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct 535 ACAAGCCAAGGCATGAACTACCCATCAAAACCTATGCAAGTTGTGGTTAGCTTGTGGAAC 594 Query 607 GGTGAAGACTGGGCGACGGATGGTGGTAAAAGCAAGATTAATTGGGCTTTTGCTCCATTT 666 |||||| |||||||||| || |||||||||||||||||||||||| |||| ||||| ||| Sbjct 595 GGTGAAAACTGGGCGACAGACGGTGGTAAAAGCAAGATTAATTGGTCTTTGGCTCCCTTT 654 Query 667 AAGGCCAATTTTCAAGGCTTTAATAACTCTGGATGCTTCGCGAATGGTGAGAAA-AATGC 725 ||||| ||||||||||||||||| |||||||| || ||| | |||| ||| ||| ||||| Sbjct 655 AAGGCTAATTTTCAAGGCTTTAACAACTCTGGTTGTTTCACCAATGCTGA-AAAGAATGC 713 Query 726 TTGTGGTTCGTCAGCGTACTGGTGGAATACCGGAAGTTATAGTAAGTTAAGTGACTCCGA 785 |||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||| Sbjct 714 TTGTGGTTCGTCAGCGTACTGGTGGAATACTGGGAGTTATAGTAAGCTAAGTGACTCCGA 773 Query 786 ACAGAAAGCCTACACAAATGTGAGACAAAAGTACATGAACTATGATTATTGTTCTGATAA 845 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 774 ACAGAAAGCCTACACAAATGTGAGACAAAAGTACATGAATTATGATTATTGTTCTGATAA 833 Query 846 GGGTAGATTCCGTGTTCCTCCAAGTGAATGTAAATGGAACAACTGA 891 || |||||||| |||||||||||||||||||||||||||||||||| Sbjct 834 GGTTAGATTCCATGTTCCTCCAAGTGAATGTAAATGGAACAACTGA 879 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43502771302 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5