BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg915144 Length=258 Score E Sequences producing significant alignments: (Bits) Value AT4G24830.1 | Symbols: | arginosuccinate synthase family | chr... 259 8e-69 > AT4G24830.1 | Symbols: | arginosuccinate synthase family | chr4:12792873-12795974 REVERSE LENGTH=1814 Length=1814 Score = 259 bits (140), Expect = 8e-69 Identities = 178/196 (91%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 48 AGCAATTCGAGCTGTTCTATCCGGTGATGGAACGGCCCTGGCTGCTGATTCAAAGGAGGC 107 ||| ||||||||||||||||||||||||||||| ||| || || |||||||||||||||| Sbjct 327 AGCTATTCGAGCTGTTCTATCCGGTGATGGAACCGCCTTGACTACTGATTCAAAGGAGGC 386 Query 108 TGGACTTTGTGGAAAACTTaaaaaaaGTCGTTCTAGCTTTACAGTGGAGGCTTGGATACC 167 ||||||| |||||||||| ||||| ||||||||||||| ||||||||||||| || ||| Sbjct 387 TGGACTTCGTGGAAAACTGAAAAAG-GTCGTTCTAGCTT-ACAGTGGAGGCTTAGACACC 444 Query 168 TCTGTCATTGTGCCATGGCTTAAGGAGAACTACGGTTGTGAAGTTGTATGTTTCACCGCC 227 |||||||||||||||||||||||||||||||| |||||||||||||| || ||||| || Sbjct 445 TCTGTCATTGTGCCATGGCTTAAGGAGAACTATGGTTGTGAAGTTGTGTGCTTCACTGCT 504 Query 228 GATGTTGGTCAGAGGC 243 |||||||||||| ||| Sbjct 505 GATGTTGGTCAG-GGC 519 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11762653266 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5