BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg915202

Length=486
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G25080.1 | Symbols:  | Protein of unknown function (DUF626) ...  86.1    3e-16


> AT3G25080.1 | Symbols:  | Protein of unknown function (DUF626) 
| chr3:9136631-9138052 FORWARD LENGTH=976
Length=976

 Score = 86.1 bits (46),  Expect = 3e-16
 Identities = 51/53 (96%), Gaps = 2/53 (4%)
 Strand=Plus/Plus

Query  394  AATGACTGGATTCGTCTATATTTGGAACTTGCTGTTGCCAC-AGCTGATAGGA  445
            ||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct  526  AATGACTGGATTCGTCTATATTTGGAACTTGCTGTTGCCACCA-CTGATAGGA  577



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 23157941767


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5