BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg915313 Length=969 Score E Sequences producing significant alignments: (Bits) Value AT5G47300.1 | Symbols: | F-box and associated interaction doma... 1399 0.0 AT3G22350.1 | Symbols: | F-box and associated interaction doma... 159 3e-38 > AT5G47300.1 | Symbols: | F-box and associated interaction domains-containing protein | chr5:19198125-19199375 FORWARD LENGTH=1251 Length=1251 Score = 1399 bits (757), Expect = 0.0 Identities = 891/955 (93%), Gaps = 12/955 (1%) Strand=Plus/Plus Query 1 ATGAGAAACACATTGGTGATGTCGGACCTTCCAGGAGATTTGTTAGAGGAGATACTTTGT 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 109 ATGAGAAACACATTGATGTTGTCGGACCTTCCAGGAGATTTGTTAGAGGAGATACTTTGT 168 Query 61 CGCGTTCCGGCCACATCTCTGAAGCAGTTACGATCTACTTGCAAACAATGGAACAATTTA 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 169 CGCGTTCCTGCCACATCTCTGAAGCAGTTACGATCTACTTGCAAACAATGGAACAATTTA 228 Query 121 TTCAAAAATGGGAGATTCATAAGAAAACACTTGGATAAAGCCCCAAAGCAGTTTCTGAAT 180 ||||| ||||||||||||| |||||||||||||||||||||||||||| | |||| |||| Sbjct 229 TTCAACAATGGGAGATTCACAAGAAAACACTTGGATAAAGCCCCAAAGGATTTTCAGAAT 288 Query 181 CTCATGTTGAACGAGTCTAGGGT-TTGTTCCATGAGTGTCAGTTTCCATGGAATTCCATC 239 |||||||||| ||| |||||||| || ||| ||||||||||||||||||||||||||||| Sbjct 289 CTCATGTTGAGCGACTCTAGGGTATT-TTCGATGAGTGTCAGTTTCCATGGAATTCCATC 347 Query 240 TGTAGAGGCCACAGGTGAACTTAAGC-TAATCGACTCCGTTTCTAGTTTAGAAGATCAAT 298 ||||||||||||| ||||||||| || |||||||||| |||||||||| |||||| ||| Sbjct 348 TGTAGAGGCCACATGTGAACTTA-GCCTAATCGACTCTTTTTCTAGTTTTGAAGATAAAT 406 Query 299 TCGAGATTTCTCAAGTCTCTCATTGTGACGGCTTATTGTTATGCACCGACG-A--CA-C- 353 |||||||||||||||||| ||| |||||||||||||||||||||||||||| | || | Sbjct 407 TCGAGATTTCTCAAGTCTTTCACTGTGACGGCTTATTGTTATGCACCGACGCAGACAACA 466 Query 354 -TAGAATCGTGGTTTGGAACCCGTGTACTGGTCAAACTAGGTGGATCGAACCCAATAATC 412 ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 467 CTAGAATCGTGGTTTGGAACCCGTGTACTGGTAAAACTAGGTGGATTGAACCCAATAATC 526 Query 413 GTTGCTACTACTATGCTTTGGGATCCTACCAAGACAAATCCTACAGTAATAGCTACAAAA 472 ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| Sbjct 527 GTTGCTACTACTATGCTTTTGGATCCTACTTGGACAAATCCTACGGTAATAGCTACAAAA 586 Query 473 TATTGGGCTATAGTGGTTATGGCTTCAAGAACCAAGAACTCGCAATCTATGAAATTAACT 532 ||||| |||||||||||||||||| | ||||||||||||||||||||||||| ||||||| Sbjct 587 TATTGAGCTATAGTGGTTATGGCTACGAGAACCAAGAACTCGCAATCTATGAGATTAACT 646 Query 533 CTCATTCATGGAGGTTTCTTGATGTCACTTGTGACTGCATCCTCCAAAGATATACTGATT 592 |||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 647 CTCAATCATGGAGGTTTCTTGATGTCACTCGTGACTGCATCCTCGAAAGATATACTGATT 706 Query 593 ACGGCGTGTCTTTAAAGGGAAATACTTACTGGTTTGCGTCAGATGAGAAAGAGAAAAATC 652 |||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 707 ACGGTGTGTCTTTGAAGGGACATACTTACTGGTTTGCGTCAGATGAGAAAGAGAAAAATC 766 Query 653 ACAACGTATTTCTGGTCAGTTTTGATTATACAACTGAAAGATTTAGACGTCTACGTCTTC 712 || ||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 767 TCAGCGTATTTCTAGTCAGTTTTGATTATACAACTGAAAGATTTAGACGTCTACGTCTCC 826 Query 713 CGTATCAGTGCCCTGATTATAAAACTGCGTCTCTATCCGTTGTTAGAGAAGATAAGCTTT 772 |||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||| Sbjct 827 CGTATCAGTGCCCTGATTATAACACTGCGTCTTTATCCGTTGTTAGAGAAGAGAAACTTG 886 Query 773 CGGTCTTGTTACAGCGCGATAATACATCAAGGACAGAGATATGGGTGACAAGTAAGATTG 832 |||| |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 887 CGGTGTTGTTACAACGCGAAAATACATCAAGGACAGAGATATGGGTGACAAGTAGGATTG 946 Query 833 GTGAGACCAAAGTGGTGTCTTGGAGCATGGTCTTAGCAGTGGATTTCCCGTCCGAACTAT 892 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 947 GTGAGACCAAAGTGGTGTCGTGGAGCATGGTCTTAGCAGTGGATTTCCCGTCCGAACTAT 1006 Query 893 TTATTT-GTTCTGGCATAAGTTTCTTGGTCGATGCCGAGAAAAAAGTCGTCGTAT 946 | |||| || ||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 1007 TCATTTTGT-CTGGCATAAGTTTCTTGGTCGATGCGGAGAAAAAATTCGTCGTAT 1060 > AT3G22350.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:7901905-7903041 FORWARD LENGTH=1137 Length=1137 Score = 159 bits (86), Expect = 3e-38 Identities = 293/389 (75%), Gaps = 30/389 (8%) Strand=Plus/Plus Query 37 GATTTGTTAGAGGAGATACTTTGTCGCGTTCCGGCCACATCTCTGAAGCAG-TTACGATC 95 |||||| |||| || ||||| | | ||| |||||||||||||||| | | |||||||| Sbjct 19 GATTTGGTAGAAGAAATACTCTCAAGGGTTTCGGCCACATCTCTGAAAC-GATTACGATC 77 Query 96 TACTTGCAAACAATGGAACAATTTATTCAAAAATGGGAGATTCATA-AGAAAACACTTGG 154 |||||||||||||||||||| |||||||||||| | || |||| ||||| ||||| Sbjct 78 TACTTGCAAACAATGGAACACTTTATTCAAAAAACGAAGTTTCAGCCAGAAA-CACTTTC 136 Query 155 ATAAAGCCCCAAAGCAGTTTCTGAATCTCATGTTGAACGAGT-CTAGGGTTTGTTCCATG 213 ||| ||| |||||| ||| | || |||||||||||| |||| | || ||||| || ||| Sbjct 137 ATATAGCTCCAAAGGAGTCTATGGTTCTCATGTTGAAGGAGTAC-AGAGTTTGCTCAATG 195 Query 214 AGTGTCAGTTTCCATGGAA-T--TCCATCTGTAGAGGC-CACAGGTGA-ACTTAAGC-TA 267 | | ||| | || ||| | ||||||||||||| || |||| | |||| || || Sbjct 196 AATATCAATCTCAATGTTTCTCCTCCATCTGTAGAGTTTCA-AGGT-ACACTTG-GCATA 252 Query 268 ATCGAC--T-CCGTTTCTAGTTTAGAAGATCAATTCGAGATT-TCTCAAGTCTCTCATTG 323 | || | || ||||| ||||| || ||| ||||||| || |||| | ||| || Sbjct 253 AAAGATGATTCCCATTCTAATTTAG--GA-CAAGTCGAGATAGTCG-AAGTTTATCACTG 308 Query 324 TGACGGCTTATTGTTATGCACCGAC--G--ACACTAGAATCGTGGTTTGGAACCCGTGTA 379 ||| || || ||||||||| || || | ||| |||| ||||||||||||| |||||| Sbjct 309 TGATGGTTTGTTGTTATGCGCC-ACCAGGGACAATAGACTCGTGGTTTGGAATCCGTGTT 367 Query 380 CTGGTC-AAACTAGGTGGATCGAACCCAA 407 ||| |||| ||||||||| ||| ||| Sbjct 368 -TGGGGGAAACCAGGTGGATCCAACTCAA 395 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47421034768 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5