BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915426
Length=1989
Score E
Sequences producing significant alignments: (Bits) Value
AT1G31540.2 | Symbols: | Disease resistance protein (TIR-NBS-L... 1112 0.0
AT5G46260.1 | Symbols: | disease resistance protein (TIR-NBS-L... 830 0.0
AT5G46500.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 446 5e-124
AT5G46450.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 318 1e-85
> AT1G31540.2 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr1:11288452-11293753 REVERSE LENGTH=4239
Length=4239
Score = 1112 bits (602), Expect = 0.0
Identities = 1364/1715 (80%), Gaps = 119/1715 (7%)
Strand=Plus/Plus
Query 6 TAATATCCGTTTCCTAGAAATAAAGAAATGT-CTTTCCAAAGAAGTCAATTTGCACTTAC 64
|||| |||||||| ||||||| ||||| | | ||| ||||||| | |||||| ||||
Sbjct 1721 TAATCTCCGTTTCTTAGAAATTAAGAACTTTGGTTT-GAAAGAAGACGGTTTGCATTTAC 1779
Query 65 CTGAAAGCTTCGACTATTTACCCCCTAAACTTAAACTATTGTGTTGG-CCCGATTATCCA 123
|| ||| ||||||||||| |||| || ||| ||||||||||| ||| || ||| ||||
Sbjct 1780 CTCCAAGTTTCGACTATTTGCCCCGTACACTCAAACTATTGTGCTGGTCCAAATT-TCCA 1838
Query 124 ATGAGATCTATGCCTACTACG-TTTAGTCCTAAAAACCTCATCAAGATCAAAATGCAGTT 182
||||| | ||||||| | | ||| ||||| ||||||| ||||| || |||||||||
Sbjct 1839 ATGAGGTGTATGCCT-TTTGGTTTTCGTCCTGAAAACCTTGTCAAGCTCGAAATGCAGTA 1897
Query 183 TAGCAAGCTAGAAAAGCTATGGGAAGGAGTTGCGTCGCTTACATGTCTCAAGGAAATGGA 242
||||||||| | ||||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct 1898 CAGCAAGCTACATAAGCTATGGGAAGGAGTTGCGCCACTTACATGTCTAAAGGAAATGGA 1957
Query 243 TTTGTATGGAT-GTGCATACTTGAAAGAAATCCCAGATCTTGCT-ATGGC-AGTTAATCT 299
| || | |||| | || || |||||| ||| ||||||||| || | || | ||||||
Sbjct 1958 TCTGCACGGATCAT-CAAACCTGAAAGTAATTCCAGATCTTTCTGA-AGCTA-CTAATCT 2014
Query 300 GGAAACACTTATTCTTGTGTTTTGCGTGAGTTTGGTAAAGCTTTCTTCCTC-AGTACAAA 358
|| | ||||| |||| |||||||| ||||||||| |||| | ||||| | ||| ||
Sbjct 2015 CGAGATACTTAATCTTAAGTTTTGCGAGAGTTTGGTCGAGCTCCCGTCCTCTA-TACGAA 2073
Query 359 ATCTCAACAAACTGACG-ACATTGGACATG--AAGTTCTGCATGAGTCTGGAGACTCTTC 415
||||||| |||||| | || ||||||||| || ||||| |||||| | | |||||
Sbjct 2074 ATCTCAATAAACTGTTGAAC-TTGGACATGCTAA--ACTGCAAAAGTCTGAAAATTCTTC 2130
Query 416 CAACCTTCATT-AACCTCAAATCTCTCAACTACCTTGATCTCAAAGGA-TGCTTGCAGTT 473
| ||| ||| |||||||||||||| || ||| ||||| | | |||| ||||
Sbjct 2131 CTACC-GGATTCAACCTCAAATCTCTTGACCGCCTCAATCTC-TATCATTGCTCAAAGTT 2188
Query 474 GAGGAATTTACCTGAAA-TCTCAATCAAAATCTCAAAGCT-AATTCTAAA-CGATACAGC 530
|| || ||| || ||| |||||| ||| |||||| || || |||||| | | |||
Sbjct 2189 GAAGACTTTTCC-CAAATTCTCAACCAACATCTCAGTTCTCAA-TCTAAATCTA-ACAAA 2245
Query 531 CATTGAACAAATCCCTTGTAATTTGCGTCTTGAGAATCTGGTTGAGCTT-CAA-AT-GAA 587
||||||| | |||||| |||||| | ||| |||||||| |||||| || || || ||
Sbjct 2246 CATTGAAGATTTCCCTTCTAATTTACATCTCGAGAATCTTGTTGAGTTTAGAATATCAAA 2305
Query 588 A-AACCTAATGGGTGAGAAACTAA-GGAAAGGGGTGCAGCCGCTTATGCCCCTCCAGGC- 644
| || | | | |||||||| || || ||| | | ||||||||| |||| ||| |||
Sbjct 2306 AGAAGAGAGT-GATGAGAAAC-AATGGGAAGAAGAGAAGCCGCTTACGCCCTTCCTGGCG 2363
Query 645 --GATGCTGTCTCCCACTTTGACGAAG-TTGCAGCTAGAGAATATGCCAAGTTTGGTGGA 701
|||| ||||||||||||||||| || ||||| || |||||| | ||||||||||||||
Sbjct 2364 ATGATGTTGTCTCCCACTTTGACG-AGCTTGCATCTCGAGAATCTCCCAAGTTTGGTGGA 2422
Query 702 GCTTCCTTCTTCGTTTCAGAATCTCAATCAACTAAAATATTTGCA-CATCCAAT--ACTG 758
|||| |||| || |||||||||||||||||||| || | ||| | ||| ||| ||||
Sbjct 2423 GCTTACTTCCTCATTTCAGAATCTCAATCAACTGAAGGACTTG-ATCAT--AATAAACTG 2479
Query 759 CATAAATCTAGAGACTCTGCCCACCGGAATCAACCTCCAATCTCTCGA-TAGCCTTAGTT 817
||||||||| ||||||||||||||||||||||||||||||||||| || || |||| |||
Sbjct 2480 CATAAATCTGGAGACTCTGCCCACCGGAATCAACCTCCAATCTCTTGATTA-CCTTTGTT 2538
Query 818 TCAAG-GGATGCTCACGGTTGAGGAGCTTTCCTGAAATCTCAACCAACATCTCAAGT-CT 875
|| || |||||||||| ||||||||||||||||||||||||||||||||||||| || ||
Sbjct 2539 TC-AGTGGATGCTCACAGTTGAGGAGCTTTCCTGAAATCTCAACCAACATCTCA-GTGCT 2596
Query 876 CGATCTAGACGAAACAGGGATTGAAGAGGTTCCTTGGTGGATCGAGAACTTCTCTAACCT 935
| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 2597 CTATCTAGACGAAACAGCGATTGAAGAGGTTCCTTGGTGGATCGAGAAATTCTCTAACCT 2656
Query 936 TGGTTTGCTAAGTATGGATC-GTTGCAGCAGGCTAAAATGTGTAT-CCTTACACATTTCT 993
| |||||| ||| | | |||||||||||||||||||||| | ||| |||||| |||
Sbjct 2657 CACTGAGCTAAGCATGAA-CAGTTGCAGCAGGCTAAAATGTGTGTTCCT-ACACATGTCT 2714
Query 994 AAACTGAAACATCTTAAGAAAGCTTACTCTTCTGA--TTGTGGGGCATTGACTAGAGTTG 1051
|||||||||||||||||| |||||| | ||| || |||||| ||||||| |||||||
Sbjct 2715 AAACTGAAACATCTTAAGGAAGCTTTGT-TTC-GAAATTGTGGTACATTGACCAGAGTTG 2772
Query 1052 ATTTGAGTGGATATGAAAGTGGGGTGGAGATGATGGAAGCAGACAATAT-GTCCAAGGAG 1110
| |||||||||||| ||||||| ||||| ||||| ||||||||||||| | | | ||
Sbjct 2773 AATTGAGTGGATATCCAAGTGGGATGGAGGTGATGAAAGCAGACAATATTGAC-AC--AG 2829
Query 1111 GCCTCTTCTTCTCTTCCTGATAGTTGTGTCCCCGATCTCAATTTCTGGGACTGCTTCAAC 1170
|||| |||||||||||| | ||| || | |||| ||||| |||||||||||||
Sbjct 2830 -CCTCCTCTTCTCTTCCTAA-AGTCGT-------A-CTCAGTTTCTTGGACTGCTTCAAC 2879
Query 1171 TTGGATCCAGAAACTATCCTGCG-C-C-AACAATCAATTATTTTCAATTACATGATATTT 1227
||||||||||||||| |||| | | | || |||||||||||||||| |||||| |||||
Sbjct 2880 TTGGATCCAGAAACTGTCCTTCATCACCAAGAATCAATTATTTTCAACTACATGTTATTT 2939
Query 1228 CCAGGGAAAGAAG---TGCCATCATATTTCACTCATCGTACAACCGGAATCTCCTCTCTA 1284
|||||||||||| ||||||||||||||||| | ||||| || |||| |||||||||
Sbjct 2940 ACAGGGAAAGAAGAAGTGCCATCATATTTCACTTACCGTACTACTGGAAGCTCCTCTCTG 2999
Query 1285 ACCATCCCTCTACTCCATGTTCC-TCTCTCCCAGCCAATCTTCAGATTTAGGGTTGGTGC 1343
||||| ||| |||| || || || ||||||||| ||| |||||||||||||| |||| ||
Sbjct 3000 ACCATTCCTATACTTCACGT-CCATCTCTCCCAACCATTCTTCAGATTTAGGATTGGCGC 3058
Query 1344 AGTGGTAACTAATAATGACGA---AGTACATATAAAGGTAAAATGTGAGTTCAAAGACAT 1400
| ||||||||||||| || || |||| | | ||||||||||||||||||||||||
Sbjct 3059 ATTGGTAACTAATAAGGAGGAGCCAGTAGAGCTCGAGGTAAAATGTGAGTTCAAAGACAG 3118
Query 1401 ATGTGGGAACAGCTTTGATGTCTG-C-TCTGATTTCTATGTTTATACAA-ATTACA-AGG 1456
|| |||||||| ||||||| | || | | | ||||| | ||| ||| || || | | |
Sbjct 3119 ATTTGGGAACAACTTTGAT-TATGACATTT-ATTTCGAAGTTAATA-AAGAT-AGATATT 3174
Query 1457 AAGTTCGGGAGGGTGGTCATATGTTA-A-CTATATTGGACTGTCGTATCCCCCTAAACGA 1514
| | |||||| | | | ||| || | |||||||||||||||||||||| ||||||||
Sbjct 3175 ATG---GGGAGGATTG-C-TATAATATAGCTATATTGGACTGTCGTATCCCTCTAAACGA 3229
Query 1515 AGATAATGCTCCCCTAGCTCAACGGGACTAC---GATCACGTGGATATGCAGATTGATGC 1571
|||||||||| | |||||||||||| ||||| ||||| |||||||| ||||||| ||
Sbjct 3230 AGATAATGCTGCTCTAGCTCAACGGAACTACTACGATCATGTGGATATAAAGATTGA-GC 3288
Query 1572 AAGT-GAT----GAT-T-GT-ATAA--AAGGATGGGGTATACGACTCTTAGAAGACTGTT 1621
|| | || ||| | || ||| || ||||||||||||||||||||| |||||||
Sbjct 3289 AATTAGACAAAAGATATAGTGATATTGAACAATGGGGTATACGACTCTTAGAGGACTGTT 3348
Query 1622 CATCACCGGAGAAC-CAACTTGGTAATCTAATCAA 1655
||||| |||||| | | ||||| |||| || ||||
Sbjct 3349 CATCAGCGGAGA-CTCGACTTGATAAT-TATTCAA 3381
> AT5G46260.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class) family | chr5:18759102-18763358 REVERSE LENGTH=3618
Length=3618
Score = 830 bits (449), Expect = 0.0
Identities = 918/1136 (81%), Gaps = 66/1136 (6%)
Strand=Plus/Plus
Query 1 ATGCGTAATATCCGTTTCCTAGAAA-T--AAAGAAATGTCTTTCCA-AAGAAGTCA-ATT 55
||||||||| |||||||| || ||| | | | || ||||| | ||||| || | |
Sbjct 1657 ATGCGTAATCTCCGTTTCTTAAAAATTGGTACG-GATATCTTTGGAGAAGAAAACAGA-T 1714
Query 56 TGCACTTACCTGAAAGCTTCGACTATTTACCCCCTAAACTTAAACTATTGTGTTGGCCCG 115
|||| ||||||||||| ||||||||||| || |||| ||||||||||||||| ||| |||
Sbjct 1715 TGCATTTACCTGAAAGTTTCGACTATTTGCCTCCTACACTTAAACTATTGTGCTGGTCCG 1774
Query 116 -ATTATCCAATGAGATCTATGCCTACTACGTTTAGTCCTAAAAACCTCATCAAGATCAAA 174
||| ||||||||| | ||||||| ||| ||| | ||||||||||| ||| | |||||
Sbjct 1775 AATT-TCCAATGAGGTGTATGCCTTCTAATTTTTGCCCTAAAAACCTTGTCACGCTCAAA 1833
Query 175 ATGCA-GTTTAGCAAGCTAGAAAAGCTATGGGAAGGAGTTGCGTCGCTTACATGTCTCAA 233
||| | | ||| |||||| | ||| | |||||||||| || | | ||||||||||| ||
Sbjct 1834 ATG-ACGAATAGTAAGCTACATAAGTTGTGGGAAGGAGCTGTGCCACTTACATGTCTAAA 1892
Query 234 GGAAATGGAT-TTGTATGGAT--GTGC-ATACTTGAAAGAAATCCCAGATCTTGCTATGG 289
|||||||||| | | |||||| || | || | |||||||||| ||||||||| | ||||
Sbjct 1893 GGAAATGGATCTAG-ATGGATCAGT-CAAT-C-TGAAAGAAATTCCAGATCTTTCCATGG 1948
Query 290 C-AGTTAATCTGGAAACACTT-ATTCTTGTGTTTTGCGTGAGTTTGGTAAAGCTTTCTTC 347
| | |||||| || |||||| ||| ||| | |||| ||||||||| ||||| ||||
Sbjct 1949 CTA-CTAATCTCGAGACACTTAATT-TTGAGAATTGCAAGAGTTTGGTGGAGCTTCCTTC 2006
Query 348 C-TCAGTACAAAATCTCAACAAACTGACGACATTGGACAT-GAAGTTCTGCATGAGTCTG 405
| | | ||||||||||||| || ||| || |||| |||| | | ||||||| ||||||
Sbjct 2007 CTTTA-TACAAAATCTCAATAAGCTGTTGAAATTGAACATGGCA-TTCTGCAACAGTCTG 2064
Query 406 GAGACTCTTCCAACCT--TCATTAACCTCAAATCTCTCAACTACCTTGATCTCA--AAGG 461
|| |||||||||| || | |||||||||||||| | ||| | | ||| ||| ||
Sbjct 2065 GAAACTCTTCCAA-CTGGT-TTTAACCTCAAATCTTTGAACCGCATCGATTTCACTAA-- 2120
Query 462 ATGCTTGCAGTTGAGGAATTTACCTGAAATCTCAATCAAAATCTCAAAGCT-AATTCTAA 520
||||| | |||| |||| ||| || || |||||| ||| |||||| | || ||| |
Sbjct 2121 ATGCTCGAAGTTAAGGACTTTTCCGGACTTCTCAACCAACATCTCAGATCTCTATT-T-G 2178
Query 521 AC--GATACAGCCATTGAACAAATCCCTTGTAATTTGCGTCTTGAGAATCTGGTTGAGCT 578
|| || ||| ||||||| || |||||| |||||| | ||| |||||||| |||| ||
Sbjct 2179 ACTGGA-ACAAACATTGAAGAACTCCCTTCTAATTTACATCTCGAGAATCTTATTGATCT 2237
Query 579 T-CAA-ATGAAAAACCTA-ATGGGTGAGAAACTAA-GGAAAGG-G-G-TGCAGCCGCTTA 631
| || || ||||| | || | || ||||| || || |||| | | || |||||||||
Sbjct 2238 TAGAATATCAAAAAAGGAGATTGATGGGAAAC-AATGGGAAGGAGTGATGAAGCCGCTTA 2296
Query 632 TGCCCCTCCAGGCGATGCTGTCTCCCACTTTGACGAAG-TTGCAGCTAGAGAATATGCCA 690
||| | | ||||||| ||||||||||||||||| || ||||| || |||| || |||
Sbjct 2297 AACCCTTACTGGCGATGTTGTCTCCCACTTTGACG-AGCTTGCAACTCCAGAACATCCCA 2355
Query 691 AGTTTGGTGGAGCTTCCTT-CTTCGTTTCAGAATCTCAATCAACT-AAAATATTTGCACA 748
| ||||||||||||||||| | || ||||||||||||| |||||| | | |||| |||
Sbjct 2356 AATTTGGTGGAGCTTCCTTGC-TCATTTCAGAATCTCATTCAACTGGAGGT-TTTGGACA 2413
Query 749 TC-CAATACTGCATAAATCTAGAGACTCTGCCCACCGGAATCAACCTCCAATCTCTCGAT 807
|| ||| |||| | |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2414 TCACAA-ACTGTAGAAATCTGGAGACTCTGCCCACCGGAATCAACCTCCAATCTCTCGAT 2472
Query 808 AGCCTTAGTTTCAAGGGATGCTCACGGTTGAGGAGCTTTCCTGAAATCTCAACCAACATC 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2473 AGCCTTAGTTTCAAGGGATGCTCACGGTTGAGGAGCTTTCCTGAAATCTCAACCAACATC 2532
Query 868 TCAAGTCTCGATCTAGACGAAACAGGGATTGAAGAGGTTCCTTGGTGGATCGAGAACTTC 927
||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| || |||
Sbjct 2533 TCAAGTCTCAATCTAGAGGAAACAGGGATTGAAGAAGTTCCTTGGTGGATCGATAAATTC 2592
Query 928 TCTAACCTTGGTTTGCTAAGTATGGATCGTTGCAGCAGGCTAAAATGTGTATCCTTACAC 987
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2593 TCTAACCTCGGTTTGCTAAGTATGGATCGTTGCAGCAGGCTAAAATGTGTATCCCTACAC 2652
Query 988 ATTTCTAAACTGAAACATCTTAAGAAA-GCTT-ACTCTTCT-GATTGTGGGGCATTGACT 1044
|||||||||||||||| |||| |||| | || ||| || ||||||||||| ||||||
Sbjct 2653 ATTTCTAAACTGAAACGTCTTG-GAAAAG-TTGACT-TTAAAGATTGTGGGGCGTTGACT 2709
Query 1045 AGAGTTGATTTGAGTGGATATGAAAGTGGGGTGGAGATGATGGAAGCAGACAATAT 1100
| |||||||||| |||| | | || |||| |||||||| | ||||| |||||||
Sbjct 2710 ATAGTTGATTTGTGTGGCTGTCCAATTGGGATGGAGATG--G-AAGCAAACAATAT 2762
Score = 368 bits (199), Expect = 1e-100
Identities = 431/536 (80%), Gaps = 43/536 (8%)
Strand=Plus/Plus
Query 1151 ATTTCTGGGACTGCTTCAACTTGGATCCAGAAACTATCCTGCGCCAACAATCAATTATTT 1210
||||| ||||||||||||||||||||||||||||| | || | |||| ||||||||||||
Sbjct 2789 ATTTCAGGGACTGCTTCAACTTGGATCCAGAAACTGTACTTCACCAAGAATCAATTATTT 2848
Query 1211 TCAATTACATGATATTTCCAGGGAAAGAAG---TGCCATCATATTTCACTCATCGTACAA 1267
|||| |||||| | |||||||||||||||| ||||||||||||||||| | ||||| |
Sbjct 2849 TCAAGTACATGTTGTTTCCAGGGAAAGAAGAAATGCCATCATATTTCACTTACCGTACTA 2908
Query 1268 CCGGAATCTCCTCTCTAACCATCCCTCTACTCCATGTTCCTCTCTCCCAGCCAATCTTCA 1327
| |||| ||||||||| ||||| |||||||| || | ||||||||||| ||| ||||||
Sbjct 2909 CTGGAAGCTCCTCTCTGACCATTCCTCTACTTCACCTCCCTCTCTCCCAACCATTCTTCA 2968
Query 1328 GATTTAGGGTTGGTGCAGTGGTAACTAATAATGA-C--G-AAGTACATATAAAGGTAAAA 1383
||||||||||||| ||| ||||||||||| | | | | || | |||||||||| ||
Sbjct 2969 GATTTAGGGTTGGCGCATTGGTAACTAATGTTAAGCATGGAAAAA-ATATAAAGGTGAAG 3027
Query 1384 TGTGAGTTCAAAGACATATGTGGGAACAGCTTTGATGTCTG-CTC---TGATTTCTATGT 1439
|||||||||||||||| || ||||||||||||| |||| || ||| ||||||||| ||
Sbjct 3028 TGTGAGTTCAAAGACAGATTTGGGAACAGCTTTCATGT-TGGCTCGGATGATTTCTACGT 3086
Query 1440 TTATACAAATTA-CAAGGAA-GTTCGGGAGGGTGGTCATATGTTAACTATATTGGACTGT 1497
|||| | | || || | || || | | ||||| |||| |||||||||||||||||||||
Sbjct 3087 TTAT-CTACTTTTCACGAAAAGT-CAGAAGGGTAGTCAAATGTTAACTATATTGGACTGT 3144
Query 1498 CGTATCCCCCTAAACGAAGATAATGCTCCCCTAGCTCAACGGGA-CTAC---GATCACGT 1553
||||||| |||||||||| ||||||| | ||||||||| |||| |||| ||||| ||
Sbjct 3145 TGTATCCCTCTAAACGAAGGTAATGCTTCTCTAGCTCAA-GGGAACTACTACGATCATGT 3203
Query 1554 GGATATGCAGATTGATGCAAGT-G---A--T-G-A--T-T--GT---A-T-AAAAGGATG 1595
|||||| | ||| || |||| | | | | | | | || | | ||||| |||
Sbjct 3204 GGATATAAATATTCATATAAGTAGTGGAGGTTGGAGATCTACGTTTGAATTAAAAGAATG 3263
Query 1596 GGGTATACGACTCTTAGA--AG-ACTGTTCATCACCGGAGAACCAACTTGGTAATC 1648
|||||||||||||||||| || ||| ||||||| | |||||| |||||||||||
Sbjct 3264 GGGTATACGACTCTTAGAGGAGGACTCTTCATCAGCAGAGAACGGACTTGGTAATC 3319
> AT5G46500.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: disease resistance protein (TIR-NBS-LRR class) family
(TAIR:AT5G46260.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink). | chr5:18856454-18857787 FORWARD LENGTH=1254
Length=1254
Score = 446 bits (241), Expect = 5e-124
Identities = 504/623 (81%), Gaps = 49/623 (8%)
Strand=Plus/Plus
Query 957 TTGCAGCAGGCTAAAATGTGTATCCTTACACATTTCTAAACTGAAACATCTTAAGAAAGC 1016
||||||||||||||||||||||||| |||||||||||||||||||||||||| || | ||
Sbjct 30 TTGCAGCAGGCTAAAATGTGTATCCCTACACATTTCTAAACTGAAACATCTTGAGGACGC 89
Query 1017 TTACTCTT-CTGATTGTGGGGCATTGACTAGAGTTGATTTGAGTGGATATGAAAGTGGGG 1075
|| | || | | |||||||||||| | | ||||||| |||||||| | | | |
Sbjct 90 TTTGT-TTCCAGCTTGTGGGGCATTAAATCGAGTTGAATTGAGTGG-T-T---CTTCTAG 143
Query 1076 TGGAGATGATGGAAGCAGACAATA-TGTCCAAGGAGGCCTCTTCTTCTCTTCCTGATAGT 1134
||| ||||| |||||||||||| || | | | ||||| |||||||||||| | |
Sbjct 144 TGG-GATGA---AAGCAGACAATATTG-AC-A-CA-GCCTCCTCTTCTCTTCCTCA-A-- 192
Query 1135 TGTGTCCCCGATCTCAATTTCTGGGACTGCTTCAACTTGGATCCAGAAACTATCCTGCGC 1194
|| ||| || ||||| |||| |||||||||||||||||||||||| |||| | |
Sbjct 193 ---GT---CGAACTTGATTTCAGGGAGTGCTTCAACTTGGATCCAGAAACTGTCCTTCAC 246
Query 1195 CAACAATCAATTATTTTCAATTACATGATATTTCCAGGG--A-AAGAAGTGCCATCATAT 1251
||| |||||||||| ||||| |||||| ||||||||||| | |||||||||||||||||
Sbjct 247 CAAGAATCAATTATATTCAAGTACATGTTATTTCCAGGGAAAGAAGAAGTGCCATCATAT 306
Query 1252 TTCACTCATCGTACAACCGGAATCTCCTCTCTAACCATCCCTCTACTCCATGTTCCTCTC 1311
|||||| | ||||| || ||| |||||||||| ||||| |||||||| || | ||||||
Sbjct 307 TTCACTTACCGTACTACTGGAGTCTCCTCTCTGACCATTCCTCTACTTCACCTCCCTCTC 366
Query 1312 TCCCAGCCAATCTTCAGATTTAGGGTTGGTGCAGTGGTAACTAA---TAATG-A-CGAAG 1366
||||| ||| ||||||||||||||||||| ||| |||||||||| ||| | | |||
Sbjct 367 TCCCAACCATTCTTCAGATTTAGGGTTGGCGCATTGGTAACTAATGTTAA-GCATGGAA- 424
Query 1367 TACATATAAAGGTAAAATGTGAGTTCAAAGACATATGTGGGAACAGCTTTGATGTCTG-C 1425
| |||||||||||||||||||||||||||||| || ||||||||||||| |||| || |
Sbjct 425 AAAATATAAAGGTAAAATGTGAGTTCAAAGACAGATTTGGGAACAGCTTTCATGT-TGGC 483
Query 1426 TC---TGATTTCTATGTTTATACAAATTA-CAAGGAA-GTTCGGGAGGGTGGTCATATGT 1480
|| ||||||||| |||||| | | || || | || || | | ||||| |||| ||||
Sbjct 484 TCGGATGATTTCTACGTTTAT-CTACTTTTCACGAAAAGT-CAGAAGGGTAGTCAAATGT 541
Query 1481 TAACTATATTGGACTGTCGTATCCCCCTAAACGAAGATAATGCTCCCCTAGCTCAACGGG 1540
||||||||||||||||| ||||||| |||||||||| ||||||| | ||||||||| |||
Sbjct 542 TAACTATATTGGACTGTTGTATCCCTCTAAACGAAGGTAATGCTTCTCTAGCTCAA-GGG 600
Query 1541 A-CTAC---GATCACGTGGATAT 1559
| |||| ||||| ||||||||
Sbjct 601 AACTACTACGATCATGTGGATAT 623
> AT5G46450.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18835618-18839546 FORWARD LENGTH=3372
Length=3372
Score = 318 bits (172), Expect = 1e-85
Identities = 724/982 (74%), Gaps = 71/982 (7%)
Strand=Plus/Plus
Query 57 GCACTTACCTGAAAGCTTCGACT-ATTTACCCCCTAAACTTAAACTATTGTGTTGGCCCG 115
||||||| | ||| | ||||| | ||||||||||||| || | | || || |||||
Sbjct 1716 GCACTTATCAGAAGGTTTCGA-TCATTTACCCCCTAAGCTCAGATTACTGAGTTGGGAAA 1774
Query 116 ATTATCCAATGAGATCTATGCCTACT-ACGTTTAGTCCTA-AAAACCTCATCAAG-ATCA 172
| || || |||||| ||||||| || || ||| |||| | ||||||| | ||| ||
Sbjct 1775 AATACCCGTTGAGATGTATGCCTTCTAAC-TTTCGTCC-AGAAAACCTTGTTAAGCTTC- 1831
Query 173 AAATGCAGT-TTAGCAAGCTAGAAAAGCTATGGGAAGGAGTTGC-GTCGCTTACATGTCT 230
||||| || ||||| || |||||| | ||||| |||||| | || |||||| | ||
Sbjct 1832 AAATG-TGTGAGAGCAAACTCGAAAAGTTGTGGGATGGAGTT-CATTCACTTACAGGGCT 1889
Query 231 CAAGGAA-ATGGATTTGTATGGATGTGCATACTTGAAAGAAATCCCAGATCTTGCTATGG 289
| ||||| ||||||||| |||| | | || |||||||||| ||||||||| || |||
Sbjct 1890 C-AGGAATATGGATTTGCGGGGATCAGAAAACCTGAAAGAAATTCCAGATCTTTCTTTGG 1948
Query 290 -CAGTTAATCTGGAA-ACACTT-ATTCTTGTG-TTTTGCGTGAGTTTGGTAAAGCTTTCT 345
|| ||| || || | |||| | | || | |||| ||||| || ||||||||
Sbjct 1949 CCA-CTAACCT-CAAGAAACTTGA-TGTT-AGCAATTGCACAAGTTTAGTGGAGCTTTCT 2004
Query 346 TCCTCAGTACAAAATCTCAA-CAAACT-GACGACATTGGACAT-GAA-GTTCTGC-ATGA 400
||| || | || ||||| || | || | || || |||| | || ||| | | ||| | |
Sbjct 2005 TCCACAATTCAGAATCTTAATC-AATTAGAGGA-ATTGCAGATGGAACG-T-TGCGA-AA 2059
Query 401 GTCTGGAGACTCTTCCAACCTT--CATTAACCTCAAATCTCTCAACTACCTTGATCTCAA 458
| |||||| |||||| | || || |||||| ||||||| | | ||| |||||||
Sbjct 2060 ATTTGGAGAATCTTCC--CATTGGAATCAACCTCGAATCTCTTTATTGCCTCAATCTCAA 2117
Query 459 AGGATGCTTGCAGTTGAGGAATTTACCTGAAATCTCAATCAA-AATCTCAAAGCTAAT-T 516
||||||| ||||||||| ||| || || ||||||| ||| |||||| |||| | |
Sbjct 2118 TGGATGCTCAAAGTTGAGGAGTTTTCCAGATATCTCAA-CAACTATCTCAGAGCT-CTAT 2175
Query 517 CTAAACGATACAGCCATTGAACAA-ATCCCTTGTAATTTGCGTCTT-GAGAATCTGGT-T 573
|||| ||| |||||||| ||| || |||| | | |||| | || |||||||| | |
Sbjct 2176 CTAAGCGAAACAGCCATAGAAGAATTTCCC-ACTGAGTTGCAT-TTAGAGAATCT-ATAT 2232
Query 574 GAGCTTCAAATGAAAAACCT-AATGGGTGAGAAACTAAGGAAAGGGGTGCAGCCGCTTAT 632
| ||| || | || | || | |||||||| | ||||| | |||||||||||||
Sbjct 2233 TATCTTGGCTTGTATGACATGAA-GAGTGAGAAATTGTGGAAAAGAGTGCAGCCGCTTAC 2291
Query 633 GCCCCTCCA-GGCGATGCTGTCTCCCACTTTGACGAAG---TTGCAGCTAGAGAATATGC 688
|| || || | | |||||||||||| ||||||||||| || | || || |||| |
Sbjct 2292 ACCGCT-CATGACCATGCTGTCTCCCTCTTTGACGAAGCTATTTC-TCT-CAG-ATATCC 2347
Query 689 CAAGTTTGGTGGAGCTTCCTTCTTCGTTTCAGAATCTCAATCAA-CTAAAATATTTGCAC 747
||||||||||||||||||||||||| |||||||||||| || || || | ||||| ||
Sbjct 2348 CAAGTTTGGTGGAGCTTCCTTCTTCATTTCAGAATCTCCAT-AATCTTGAGCATTTGAAC 2406
Query 748 A-TCCAATACTGCATAAATCTAGAGACTCTGCCCACCGGAATCAACCTCCAATCT-CTCG 805
| | || | |||| |||||| |||||||| ||||| ||| ||||||| ||| | || |
Sbjct 2407 ATTGCACGA-TGCACAAATCTGGAGACTCTTCCCACTGGAGTCAACCTAGAAT-TACTTG 2464
Query 806 -ATAGCCTTAG-TTTCAAGGGATGCTCACGGTTGAGGAGCTTTCCTGAAATCTCAACCAA 863
| | ||| | ||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct 2465 AACA-ACTT-GATTTTTCTGGATGCTCACGGTTGAGGAGTTTTCCTGATATCTCAACCAA 2522
Query 864 CATCTCAAGTCTCGATCTAGACGAAACAGGGATTGAAGAGGTTCCTTGGTGGATCGAGAA 923
||||| || | |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct 2523 CATCTTTTCACTAGTTCTAGACGGAACAGGGATTGAAGAGGTTCCTTGGTGGATTGAGGA 2582
Query 924 CTTCTCTAACCT-TGGTTTGCTAAGTATGGATCGT-TGCAGCAGGCTAAAATGTGTATCC 981
|||| || || | ||| || |||||| || | |||| || || || |||| |||
Sbjct 2583 TTTCTATAGGCTCTC-TTTCCTGAGTATG-ATTGGATGCAACAATTTACAAGGTGTGTCC 2640
Query 982 TTACACATTTCTAAACTG-AAA 1002
|| |||||||||||||| |||
Sbjct 2641 CTAAACATTTCTAAACTGGAAA 2662
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98543669835
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5