BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915474
Length=1749
Score E
Sequences producing significant alignments: (Bits) Value
AT5G46040.1 | Symbols: | Major facilitator superfamily protein... 2765 0.0
AT5G46050.1 | Symbols: ATPTR3, PTR3 | peptide transporter 3 | c... 1400 0.0
> AT5G46040.1 | Symbols: | Major facilitator superfamily protein
| chr5:18671397-18673551 REVERSE LENGTH=1761
Length=1761
Score = 2765 bits (1497), Expect = 0.0
Identities = 1659/1739 (95%), Gaps = 4/1739 (0%)
Strand=Plus/Plus
Query 1 ATGACAGTAGAAGAGGTAGGAGATGATTATACAAAAGATGGAACAGTTGATCTTCGAGGA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGACAGTAGAAGAGGTAGGAGATGATTATACAAAAGATGGAACAGTTGATCTTCGAGGA 60
Query 61 AATTGCGTCCGAAGATCTCAAACAGGCCGTTGGAAAGCTTGTTCCTTCGTCGTTGTGTAC 120
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AATCGCGTCCGAAGATCCCAAACAGGCCGTTGGAAAGCTTGTTCCTTCGTCGTTGTGTAC 120
Query 121 GAGGTATTTGAAAGAATGGCGTATTATGGAATATCAAGCAACTTAGTGATCTACATGACT 180
||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 121 GAGGTGTTTGAAAGAATGGCGTATTATGGAATATCAAGCAACCTAGTTATCTACATGACT 180
Query 181 ACCAAATTGCACCAAGGCACGGTCAAGTCGTCGAACAATGTGACCAATTGGGTTGGGACT 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 181 ACCAAATTGCACCAAGGCACGGTCAAGTCGTCGAACAATGTGACCAACTGGGTTGGGACT 240
Query 241 AGCTGGCTCACTCCAATCTTGGGTGCTTATGTTGCCGATGCTCATCTCGGTCGCTACATC 300
|| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 241 AGTTGGCTCACTCCAATCTTGGGTGCTTATGTTGCTGATGCTCATTTCGGTCGCTACATC 300
Query 301 ACTTTCGTCATCTCTTCCGCTATCTATTTATTGGGAATGGCATTACTGACGTTATCAGTA 360
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 301 ACTTTCGTCATCTCTTCCGCTATCTATTTATTGGGAATGGCATTACTGACACTATCAGTA 360
Query 361 TCTCTACCGGCACTTAAACCACCGAAATGTTCGACGGCTAATGTTGAAAACTGCGAAAAA 420
|| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 361 TCGCTACCGGGACTTAAACCACCGAAATGTTCGACGGCTAATGTTGAAAACTGTGAAAAA 420
Query 421 GCTTCGGTTTTACAATTAGCGGTATTCTTTGGAGCGTTATACACATTAGCGGTTGGTACA 480
||||||||| |||| ||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 421 GCTTCGGTTATACAGTTAGCGGTATTCTTTGGAGCGTTATACACATTAGCAATCGGTACA 480
Query 481 GGCGGTACGAAACCAAACATTTCTACAATAGGTGCTGATCAATTCGATGAATTCGACCCT 540
|||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 481 GGCGGTACAAAACCGAACATTTCTACAATAGGTGCTGATCAATTCGATGAATTTGACCCA 540
Query 541 AAGGAGAGGATTCATAAACATTCATTCTTCAATTGGTGGATGTTTAGTATCTTCTTTGGT 600
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 AAGGACAAGATTCATAAACATTCATTCTTCAATTGGTGGATGTTTAGTATCTTCTTTGGT 600
Query 601 ACTTTCTTTGCCACAACTGTTCTTGTCTATGTTCAAGATAATGTGGGTTGGGCCATAGGT 660
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 601 ACTTTCTTTGCTACAACTGTTCTTGTCTATGTTCAAGATAATGTTGGTTGGGCCATAGGT 660
Query 661 TATGGGCTTTCAACTTTGGGTCTTGCTTTCTCAATATTCATATTCTTGTTGGGAACTCGG 720
|||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct 661 TATGGGCTTTCAACTTTGGGACTTGCTTTCTCCATTTTCATATTCTTGTTGGGAACTCGG 720
Query 721 TTATACCGCCATAAACTCCCAACGGGAAGCCCATTCACCAAGATGGCTAGAGTCATTGTG 780
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 721 TTATACCGACATAAACTCCCAATGGGAAGCCCATTCACCAAGATGGCTAGAGTCATCGTG 780
Query 781 GCTTCACTTCGCAAAGCCCACGAGCCTATGCCCCGTGATTCGACGTGCTTCTATGAGCTT 840
||||||||||||||||||| |||||| ||| | ||||||||||| ||||||||||||||
Sbjct 781 GCTTCACTTCGCAAAGCCCGCGAGCCGATGTCGAGTGATTCGACGCGCTTCTATGAGCTT 840
Query 841 TCGCCAATGGAATATGCAAGCAAAAGGGCTTTCCCGATCCATTCTAC-TCTAAGTCTTAG 899
| || ||||||||||| ||||||||||||||||| ||||||||||| || |||||| ||
Sbjct 841 CCACCTATGGAATATGCTAGCAAAAGGGCTTTCCCAATCCATTCTACTTC-AAGTCTAAG 899
Query 900 ATTCTTAGATCGAGCTTCACTCAAAACCGGATCAACCCATAAATGGAGTCTCTGTACAAT 959
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 900 ATTCTTAAATCGAGCTTCACTCAAAACCGGATCAACCCATAAATGGAGGCTCTGTACTAT 959
Query 960 CACAGAAGTGGAAGAAACAAAACAGATGCTAAAAATGTTACCTGTCCTCTTCGTAACATT 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 CACAGAAGTGGAAGAAACAAAACAGATGCTAAAAATGTTACCTGTCCTCTTCGTAACATT 1019
Query 1020 CGTCCCAAGCATGATGCTTGCTCAAATAATGACTTTGTTCATCAAACAAGGAACGACCCT 1079
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1020 CGTCCCAAGCATGATGCTTGCTCAAATAATGACTCTGTTCATCAAACAAGGAACGACCCT 1079
Query 1080 CGACCGTCGTCTCACAAACAACTTCAGCATCCCGCCAGCAAGTCTCTTAGGCTTCACAAC 1139
||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||
Sbjct 1080 CGACCGTCGTCTCACAAACAACTTCAGCATCCCACCCGCAAGTCTCCTAGGCTTCACAAC 1139
Query 1140 ATTCTCAATGCTCGTCTCTATAGTCATATACGACCGTGTATTTGTTAAACTCATGAGAAA 1199
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1140 ATTCTCAATGCTCGTCTCTATAGTCATATACGACCGTGTCTTTGTTAAGTTCATGAGAAA 1199
Query 1200 ACTAACCGGAAATCCAAGAGGTATCACATTGCTCCAGCGAATGGGAATCGGTATGATCCT 1259
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1200 ACTAACCGGAAATCCAAGAGGTATCACATTGCTTCAGCGAATGGGAATCGGTATGATCCT 1259
Query 1260 TCACATCCTAATCATGATCATAGCGTCCATAACCGAACGGTATAGGCTCAAGGTCGCTGC 1319
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1260 TCACATCCTAATCATGATCATCGCGTCCATAACCGAACGGTATAGGCTCAAGGTCGCTGC 1319
Query 1320 TGAACGCGGGCTAAACCACCAGACCGCTGTACCAATTCCCTTGACCATTTTCACATTGCT 1379
||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 1320 TGAACACGGGCTAACCCACCAGACCGCTGTACCAATTCCTTTGAGCATTTTCACATTGCT 1379
Query 1380 TCCACAGTATGTGA-TAATGGGTTTGGCTGATGCTTTTATAGAGATAGCAAAGCTCGAGT 1438
|||||||||||| | ||||||||||||| |||||||| ||||| ||||||||||| ||||
Sbjct 1380 TCCACAGTATGT-ACTAATGGGTTTGGCAGATGCTTTCATAGAAATAGCAAAGCTGGAGT 1438
Query 1439 TCTTCTACGATCAAGCACCAGAGAGTATGAAAAGCCTCGGGACATCATATACGAGCACAA 1498
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1439 TTTTCTACGATCAAGCACCAGAGAGTATGAAAAGCCTCGGGACATCATATACGAGCACAA 1498
Query 1499 GTATGGCAGTCGGGAATTTCCTGAGCAGTTTTTTGCTTTCGTCCGTGTCTCAGATAACAA 1558
|||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||
Sbjct 1499 GTATGGCAGTCGGGTATTTCATGAGCAGCATTTTGCTTTCGTCAGTGTCTCAGATAACAA 1558
Query 1559 AGACGCAGGGAAGAGGATGGATTCAAAACAACTTGAATGAGTCTAGGTTGGATAAATATT 1618
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1559 AGAAGCAGGGAAGAGGATGGATTCAAAACAACTTGAATGAGTCTAGGCTGGATAACTATT 1618
Query 1619 ACATGTTCTTCGCGGTACTTAATTTGGTTAACTTCATCCTCTTCTTGGTTGTAATTAGAT 1678
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1619 ACATGTTCTTCGCGGTACTTAATTTGCTTAACTTCATCCTCTTCTTGGTTGTAATTAGAT 1678
Query 1679 TTTATGAGTACAGAGCTGATGTTACGCAATCAGCAAATGTAGAACAGAAAGAACCAAAT 1737
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1679 TTTATGAGTACAGAGCTGATGTTACGCAATCAGCAAACGTAGAACAGAAAGAACCAAAT 1737
> AT5G46050.1 | Symbols: ATPTR3, PTR3 | peptide transporter 3 |
chr5:18675035-18679146 REVERSE LENGTH=1851
Length=1851
Score = 1400 bits (758), Expect = 0.0
Identities = 1428/1743 (82%), Gaps = 80/1743 (5%)
Strand=Plus/Plus
Query 1 ATGACAGTAGAAGAGGTAGGAGATGATTATACAAAAGATGGAACAGTTGATCTTCGAGGA 60
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct 76 ATGACAGTAGAAGAGGTAGGAGACGATTACACAAAAGATGGAACAGTTGATCTTCAAGGC 135
Query 61 AATTGC-GTCCGAAGATCTCA-AACAGGCCGTTGGAAAGCTTGTTCCTTCGTCGTTGTGT 118
|| | | || |||||||| || | ||| |||||||||||||| || ||||| |||||||
Sbjct 136 AA-TCCTGTTCGAAGATC-CATTAGAGGTCGTTGGAAAGCTTGCTCTTTCGTTGTTGTGT 193
Query 119 ACGAGGTATTTGAAAGAATGGCGTATTATGGAATATCAAGCAACTTAG-TGATCTACATG 177
||||||| |||||| | ||||| ||||| || |||||||||||| | | | || ||||||
Sbjct 194 ACGAGGTGTTTGAACGGATGGCTTATTACGGGATATCAAGCAACCT-GTTTATTTACATG 252
Query 178 ACTACCAAATTGCACCAAGGCACGGTCAAGTCGTCGAACAATGTGACCAATTGGGTTGGG 237
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 253 ACAACCAAATTGCACCAAGGAACGGTCAAGTCGTCGAACAATGTGACCAATTGGGTTGGG 312
Query 238 ACTAGCTGGCTCACTCCAATCTTGGGTGCTTATGTTGCCGATGCTCATCTCGGTCGCTAC 297
||||| |||||||||||||||||||||||||| |||| || |||| |||||||||||||
Sbjct 313 ACTAGTTGGCTCACTCCAATCTTGGGTGCTTACGTTGGAGACGCTCTTCTCGGTCGCTAC 372
Query 298 ATCACTTTCGTCATCTCTTCCGCTATCTATTTATTGGG-A--ATGGCATTACTGACGTTA 354
||||||||||||||||||| ||||||||||| | ||| | |||| ||| || |||
Sbjct 373 ATCACTTTCGTCATCTCTTGTGCTATCTATTTCTCGGGGATGATGGTGTTA---ACATTA 429
Query 355 TCAGTATCTCTACCGGCACTTAAACCACC-GAAATGTTCGACGGCTAATGTTGAAAACTG 413
|||||| || |||||| | |||| ||||| ||| ||||| ||| ||||||| ||||| ||
Sbjct 430 TCAGTAACTATACCGGGAATTAAGCCACCAGAA-TGTTCCACGACTAATGTGGAAAATTG 488
Query 414 CGAAAAAGCTTCGGTTTTACAATTAGCGGTATTCTTTGGAGCGTTATACACATTAGCGGT 473
||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |
Sbjct 489 CGAAAAAGCTTCGGTTTTACAATTAGCAGTTTTCTTTGGAGCGTTATACACATTAGCAAT 548
Query 474 TGGTACAGGCGGTACGAAACCAAACATTTCTACAATAGGTGCTGATCAATTCGATGAATT 533
|||||||||||||||||||| ||||| || |||||||| |||||||||||||||| |||
Sbjct 549 CGGTACAGGCGGTACGAAACCGAACATATCAACAATAGGAGCTGATCAATTCGATGTATT 608
Query 534 CGACCCTAAGGAGAGGATTCATAAAC-ATTCATTCTTCAATTGGTGGATGTTTAGTATCT 592
|||||| ||||||| || ||| |||| || |||||||||| |||||||||||||||||||
Sbjct 609 CGACCCAAAGGAGAAGACTCAAAAACTAT-CATTCTTCAACTGGTGGATGTTTAGTATCT 667
Query 593 TCTTTGGTACTTTCTTTGCCA-CAACTGTTCTTGTCTATGTTCAAGATAATGTGGGTTGG 651
||||||||||| |||| |||| || |||||||||||||||||||||||||||| || |||
Sbjct 668 TCTTTGGTACTCTCTTCGCCAACA-CTGTTCTTGTCTATGTTCAAGATAATGTTGGCTGG 726
Query 652 GCCATAGGTTATGGGCTTTCAACTTTGGGTCTTG-CT-TTCTCAATATTC-ATATTCTTG 708
|| | |||||||| ||| |||| || ||| ||| || || || || | | || ||||||
Sbjct 727 ACCTTGGGTTATGGACTTCCAACATTAGGT-TTGGCTATT-TCCAT-TACCATTTTCTTG 783
Query 709 TTGGGAACTCGGTTATACCGCCATAAACT-CCCAACGGGAAGCCCATTCACCAAGATGGC 767
||||| |||| ||| |||||||||||||| |||| | |||||||||||||||||||||||
Sbjct 784 TTGGGCACTCCGTTTTACCGCCATAAACTTCCCA-CTGGAAGCCCATTCACCAAGATGGC 842
Query 768 TAGAGTCATTGTGGCTTCACTTCGCAAAGCCCACG-AGCCTATGCCCCGTGAT-TCGACG 825
| ||||||| ||||||||| ||||||||||| | | | || ||| | | ||| || |||
Sbjct 843 TCGAGTCATCGTGGCTTCATTTCGCAAAGCCAATGCA-CCAATGACGCATGACATC-ACG 900
Query 826 TGCTTCTATGAGCTTTCGCCAATGGAATATGCAAGCA-AAAGG-GC-TTTCCCGATCCAT 882
||||| ||||||| | | | ||||||| | || ||||| || ||||| ||||||
Sbjct 901 AGCTTCCATGAGCTGCCTTCTCTTGAATATG-A-GCGGAAAGGCGCCTTTCC-GATCCAC 957
Query 883 TCTACTCTAAGTCTTA-GATTCTTAGATC-GAGCTTCACTCAAAACCGGATCAACCCATA 940
|||||| |||| ||| |||||||||| | |||||||||||||||| ||| ||| ||||
Sbjct 958 CCTACTCCAAGT-TTACGATTCTTAGA-CAGAGCTTCACTCAAAACAGGAACAAATCATA 1015
Query 941 AATGGAGTCTCTGTACAATCACAGAAGTGGAAGAAACAAAACAGATGCTAAAAATGTTAC 1000
|||||| ||| ||||| | ||||||||| |||||||||||||| ||||| | ||||||||
Sbjct 1016 AATGGAATCTTTGTACTACCACAGAAGTTGAAGAAACAAAACAAATGCTGAGAATGTTAC 1075
Query 1001 CTGTCCTCTTCGTAACATTCGTCCCAAGCATGATGCTTGCTCAAAT-AATGACTTTGTTC 1059
| ||| | ||| |||| ||||||||||| ||||||||||| ||||| || || |||||
Sbjct 1076 CAGTCTTGTTCATAACTTTCGTCCCAAGTATGATGCTTGCACAAATCAAC-ACATTGTTT 1134
Query 1060 ATCAAACAAGGAACGACCCTCGACCGTC-G-TCTCACAAACAACTT-CAGCATCCCGCCA 1116
| ||||||||||| || || ||||| | | | || | ||| ||||||||| |||
Sbjct 1135 GTGAAACAAGGAACCACTCTAGACCGAAAGGT-T-ACCGG-ATCTTTCAGCATCCCACCA 1191
Query 1117 GCAAGTCTCTTAGGCTTCA-CAACATTCTCAATGCTCGTCTCTATAGTCATATACGACCG 1175
|| ||||||| || || || || |||||||||| | || |||||| | || |||||
Sbjct 1192 GCGAGTCTCTCCGGATTTGTCA-CACTCTCAATGCTTATTTCCATAGTCTTGTATGACCG 1250
Query 1176 TGTATTT-GTTAA-ACTCATGAGAAAACTAACCGGAAATCCAAGAGGTATCACATTGCTC 1233
|| ||| || || | | | ||||| | || || ||||||||||| || || |||||
Sbjct 1251 AGT-TTTCGTCAAGA-TAACCCGAAAATTCACTGGTAATCCAAGAGGCATTACTTTGCTT 1308
Query 1234 CAGCGAATGGGAATCGGTATGATCCTTCACATCCTAATCATGATCATAGCGTCCATAACC 1293
|| ||||||||||| ||| | ||| |||| ||||| ||||||||| | || || | ||
Sbjct 1309 CAACGAATGGGAATTGGTCTTATCTTTCATATCCTCATCATGATCGTCGCATCTGTCACT 1368
Query 1294 GAACGGTATAGGCTCAAGGTCGCTGCTGAACGCGGGCTAAACCACCAGACCGCTGTACCA 1353
||| ||||||| ||||| ||||||||||| | || || | |||||| |||| ||| |
Sbjct 1369 GAAAGGTATAGACTCAAAGTCGCTGCTGATCATGGTCTCATCCACCAAACCGGAGTAA-A 1427
Query 1354 ATTCCC-TTGACCAT-TTTCACATTGCTTCCACAGTAT-GTGATAATGGGTTTGGCTGAT 1410
| | || || ||||| ||| | ||||||||||| | | || |||||||| ||||||||
Sbjct 1428 ACTACCATTAACCATCTTTG-CTTTGCTTCCACAAT-TCGTCCTAATGGGTATGGCTGAT 1485
Query 1411 GCTTT-TATAGA-GATAGCAAAGCTCGAGTTCTTCTACGATCAAGCACCAGAGAGTATGA 1468
| || | |||| | | |||||||| ||||| |||||||||||||| || ||||| ||||
Sbjct 1486 TCGTTCT-TAGAAGTT-GCAAAGCTTGAGTTTTTCTACGATCAAGCTCCCGAGAGCATGA 1543
Query 1469 AAAGCCTCGGGACATCATATACGAGCA-CAAGTATGGC-AGTCGGGAATTTCCTGAGCAG 1526
|||||||||||||||||||| ||| || | ||| |||| | | ||||||||| |||||||
Sbjct 1544 AAAGCCTCGGGACATCATATTCGA-CAACGAGTTTGGCGATT-GGGAATTTCATGAGCAG 1601
Query 1527 TTTTTTGCTT-TCGTCCG-TGTCTCAGATAACAAAGA--CGCAGGGAAGAGGATGGATTC 1582
||| ||| || || | || | ||| |||||||||||| || ||| |||||||||||||
Sbjct 1602 TTTCTTG-TTATC-TACGGTATCTGAGATAACAAAGAAACG-AGG-AAGAGGATGGATTT 1657
Query 1583 AAAACAAC-TTGAATGAGTCTAGGTTGGATAAATATTACATGTTCTTCGCGGTACTTAAT 1641
|||||| || |||||||||||||||||| | |||||| ||||||| ||||||||||||
Sbjct 1658 TGAACAACCTT-AATGAGTCTAGGTTGGATTACTATTACCTGTTCTTTGCGGTACTTAAT 1716
Query 1642 TTGGTTAACTTCATCCTCTTCTTGGTTGTAATTA-GATTTTATGAGTACAGAGCTGATGT 1700
||||||||||| | | |||||||| || ||| | ||||||| || |||||||| ||
Sbjct 1717 CTGGTTAACTTCGTTTTGTTCTTGGTCGTGGTTAAG-TTTTATGTTTATAGAGCTGAGGT 1775
Query 1701 TAC 1703
|||
Sbjct 1776 TAC 1778
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86495539035
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5