BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915590
Length=5517
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45260.1 | Symbols: RRS1, ATWRKY52, SLH1 | Disease resistanc... 1417 0.0
AT5G45050.1 | Symbols: TTR1, ATWRKY16, WRKY16 | Disease resista... 889 0.0
AT5G45240.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 207 7e-52
> AT5G45260.1 | Symbols: RRS1, ATWRKY52, SLH1 | Disease resistance
protein (TIR-NBS-LRR class) | chr5:18326203-18332609 FORWARD
LENGTH=4321
Length=4321
Score = 1417 bits (767), Expect = 0.0
Identities = 1298/1546 (84%), Gaps = 70/1546 (5%)
Strand=Plus/Plus
Query 1133 AGAAAAAACTATCAGAAATGGAGACTGCATTGCTCAGACTCAAGCCACGTCTTCCCTTCC 1192
|||||||||| |||||||||||||||||||| |||| |||||||| ||||| ||| ||
Sbjct 1135 AGAAAAAACTCTCAGAAATGGAGACTGCATTCCTCAAACTCAAGCGACGTCCTCCATTTA 1194
Query 1193 AGATTTTTGATGCATTCAAGAGCAGCTATGATACACTCAATGACAGCGAAAAGAACATTT 1252
||||| | |||||||| || |||| |||||| ||||||| ||||| ||||||||||||||
Sbjct 1195 AGATTGTCGATGCATTTAAAAGCACCTATGACACACTCAGTGACAACGAAAAGAACATTT 1254
Query 1253 TTCTAGACATTGCTTGTTTCTT-CAGAGGAGAAAATGTGGACTACGTAATGCAACTGCTA 1311
|| | ||||| ||||||||||| ||| ||||||||||| ||||||| || ||||||||
Sbjct 1255 TTTTGGACATAGCTTGTTTCTTCCAG-GGAGAAAATGTCAACTACGTGATACAACTGCTT 1313
Query 1312 GAAGGTTGTGACTTT-TTTCCGCATGTTGGAGTGGATGTGCTTGTTGACAAGGGCCTGGT 1370
|| ||||||| ||| ||||| ||||||| | | ||||| |||||||||||| | |||||
Sbjct 1314 GAGGGTTGTG-GTTTCTTTCCACATGTTGAAATTGATGTCCTTGTTGACAAGTGTCTGGT 1372
Query 1371 GACTTTTTCAGAAAA-C-ATTTTGCAAATGCATAATCTGATCCAGGATGTTGGCCAAGAA 1428
||| |||||||||| | | |||| ||||||| |||| ||||||| | |||| ||||
Sbjct 1373 AACTATTTCAGAAAACCGAGTTTG--GTTGCATAAGCTGACCCAGGATATCGGCCGAGAA 1430
Query 1429 ATAATTAATGGAGAAACAATTTATATTGAGAGGCGCCGTAGACTGTGGGAACCTTGGAGC 1488
|| || |||||||||||| | | || ||||||||| | |||||||||||||||||||||
Sbjct 1431 ATCATAAATGGAGAAACAGTACAGATCGAGAGGCGCAGAAGACTGTGGGAACCTTGGAGC 1490
Query 1489 ATCAAGTACTTATTAGAAGATAATG-A-AC--A-CAAA---AGAA-CT---------TTA 1530
||||| || ||||||||| |||||| | || | |||| |||| || ||
Sbjct 1491 ATCAAATATTTATTAGAATATAATGAACACAAAGCAAATGGAGAACCTAAAACAACCTTC 1550
Query 1531 AAACGTGCTCAGGGCACCGAGGACG-TCGAAGGCATCTTTCTGGACACAACAGACATAAG 1589
||||||||||||||| | || || | |||||||| | ||||| |||||| || || ||||
Sbjct 1551 AAACGTGCTCAGGGCTCTGAAGA-GATCGAAGGCCTGTTTCTAGACACATCAAACTTAAG 1609
Query 1590 TTTTGATATTAAG-CCTGCTGCCTTTGATAATATGCTGAACCTTAGATTGCTCAAGATTT 1648
|||||| | || ||| |||||||| | |||||| ||||||||||||||||||| ||||
Sbjct 1610 ATTTGATCTGCAGCCCT-CTGCCTTTAAGAATATGTTGAACCTTAGATTGCTCAAAATTT 1668
Query 1649 -TCTGTTCCAATCCTGAAGTCCATCATGTAATCAATTTCCCCAA-AGGCTCTTTGTATAC 1706
| |||||||||||||||||||||| |||||||||||| ||||| ||||||| || || |
Sbjct 1669 AT-TGTTCCAATCCTGAAGTCCATCCTGTAATCAATTT-CCCAACAGGCTCTCTGCATTC 1726
Query 1707 TCTTCCTAATGAGCTAAGACTCCTTCATTGGGACAACTATCCTCTGCAATCTTTGCCTCA 1766
|||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||
Sbjct 1727 TCTTCCTAATGAGCTAAGACTCCTCCATTGGGAGAACTATCCTCTGAAATCTTTGCCTCA 1786
Query 1767 AAAGTTTGATCCTAGGCACCTCGTTGAAATCAACATGTCGTACAGTCAACTTCAGAAACT 1826
|| |||||||| |||||||| || |||||||||||| |||| |||||||||||||||||
Sbjct 1787 GAATTTTGATCCAAGGCACCTTGTCGAAATCAACATGCCGTATAGTCAACTTCAGAAACT 1846
Query 1827 TTGGGGTGGAACCAAGAACCTGGAGATGTTGAGGACGATTAGGCTTTGTCATTCCCAGGA 1886
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 1847 TTGGGGTGGAACCAAGAACCTGGAGATGTTGAGGACGATCAGGCTTTGCCATTCCCACCA 1906
Query 1887 ACTAGTTGATGTTGACGATCT-TTCAAAAGCTCAAAATCTTGAGGTAATTGATCTCCAAG 1945
||||||||| | || ||||| || ||||||| |||||||||||||||||||||||||||
Sbjct 1907 TCTAGTTGATATCGATGATCTCTT-AAAAGCTGAAAATCTTGAGGTAATTGATCTCCAAG 1965
Query 1946 GTTGTACAAGACTGCAGAGTTTCCCAGACACATGTCAATTGCTACATCTACGAGTAGTAA 2005
||||||| |||||||||| |||||||| | || ||| |||||||| ||||||||| ||||
Sbjct 1966 GTTGTACGAGACTGCAGAATTTCCCAGCCGCAGGTCGATTGCTACGTCTACGAGTTGTAA 2025
Query 2006 ATCTCTCAGGTTGCTTAGAGATCAAAAGCGTCCCGGATTTTCCACCAAATATTGTGACAC 2065
|||||||||||||| || |||| ||||| |||| || ||||||||||||||| || ||
Sbjct 2026 ATCTCTCAGGTTGCATAAAGATTAAAAGTGTCCTAGAAATTCCACCAAATATTGAGAAAC 2085
Query 2066 TACGTCTAAAGGGGACTGGCATAATAAAACTACCAATTGCCA-----A-GCGGAATGGTG 2119
||| |||| |||| ||||||||| || | ||||| || ||| | || || |
Sbjct 2086 TACATCTACAGGGAACTGGCATATTAGCATTACCAGTTTCCACTGTTAAGCCAAACCATA 2145
Query 2120 GAGAGCTTGTTAGTCTTTC---C-GAA-TTCCAAGGTCTTTCAGATGACTTGAAACTTGA 2174
|||||||||| | | |||| | ||| |||| ||||||||||| | ||| |||||
Sbjct 2146 GAGAGCTTGTGAAT-TTTCTAACAGAAATTCCG-GGTCTTTCAGA-G----GAA-CTTGA 2197
Query 2175 GCGTTTGAA-AAGTCTGCAGGAATCTAGCTTATCTTGTCAAGATCTTGGTAAGCTTATCT 2233
|||||| || |||||||| |||||||| || |||||||||||||||||| |||||||| |
Sbjct 2198 GCGTTT-AACAAGTCTGCTGGAATCTAACTCATCTTGTCAAGATCTTGGGAAGCTTATTT 2256
Query 2234 GCTTGGATCTGAAAGATTGTT-TTCTTTTGC-GAAGTCTGCCAAACATGGCTAACTTAGA 2291
||||||| ||||||||||| | || ||| || || ||||||||||||||||||| |||||
Sbjct 2257 GCTTGGAGCTGAAAGATTGCTCTTGTTT-GCAGA-GTCTGCCAAACATGGCTAATTTAGA 2314
Query 2292 ACTTCTCAAAGTTCTTGATCTCTCTGGTTGCTCAAGGCTCAATACTATTCAGAGTTTCCC 2351
||| || |||||||||||||| ||||||||||| || ||| |||||||| |||||||
Sbjct 2315 TCTT---AATGTTCTTGATCTCTCGGGTTGCTCAAGTCTTAATTCTATTCAGGGTTTCCC 2371
Query 2352 TCGTAACCTGAAAGAGTTATATCTTG-TCGGCACTGCAGTAAGACAAGTGGCACAACTTC 2410
|||| |||||| |||||||||||| | ||||||||| ||||| ||||| |||||||||
Sbjct 2372 TCGTTTTCTGAAACAGTTATATCTTGGT-GGCACTGCAATAAGAGAAGTGCCACAACTTC 2430
Query 2411 CTCAAAGTCTAGAACTTTTGAATGCACATGGATCTCGTTTGAGAAGTCTGCCAAACATGG 2470
|||||||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2431 CTCAAAGTCTAGAAATCTTGAATGCACATGGATCTTGTTTGCGAAGTCTGCCAAACATGG 2490
Query 2471 CTAATTTAGAACTTCTCAAAGTTCTTGATCTCTCTGGTTGCTCA-AGGCTCGCTACTATT 2529
||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||
Sbjct 2491 CTAATTTAGAATTTCTCAAAGTTCTTGATCTCTCTGGTTGCTCAGAG-CTCGAGACTATT 2549
Query 2530 CAGAGTTTCCCTCGTAACCTGAAAGAGTTATATCTTGCCGGCACTGCAGT-AAGACAAGT 2588
||| |||| ||||| ||||| |||||||||||| |||| |||||| | || |||| ||||
Sbjct 2550 CAGGGTTTTCCTCGGAACCTAAAAGAGTTATATTTTGCTGGCACTAC-GTTAAGAGAAGT 2608
Query 2589 GCCACAACTTCCTCAAAGTCTAGAATTCATGAATGCGCATGGTTCT 2634
||| ||||||||| ||| ||||| || ||||||| |||||||||
Sbjct 2609 GCCCCAACTTCCTTTAAGCCTAGAGGTCTTGAATGCACATGGTTCT 2654
Score = 734 bits (397), Expect = 0.0
Identities = 918/1161 (79%), Gaps = 70/1161 (6%)
Strand=Plus/Plus
Query 5 TCGTCTACATCAGCTGCGTAGATGAGGTACGGTACTCCTTCGTCAGCCACCTCTCCGAAT 64
|||| | ||||||||||||||| |||||||||||||| ||||| ||||||||||| |||
Sbjct 103 TCGTGTGCATCAGCTGCGTAGAAGAGGTACGGTACTCTTTCGTGAGCCACCTCTCTGAAG 162
Query 65 CTCTCTG-CGAAAAAGGCATAAATGATGTGTTCGTCGA--TAG----CGCCGA-CAACCT 116
||||| | || ||||||||||||| ||||| |||| || ||| || || | | |
Sbjct 163 CTCTCCGTCG-AAAAGGCATAAATAATGTGGTCGTAGATGTAGATATCGATGATCTGCTT 221
Query 117 TTCGGAGGAGGCCCAGGCAAAAG-TCGAGAGAGCTAGGGTTTCTGTGATGGTTCTACCCG 175
||| ||||| | ||||| |||| |||||| |||| ||||||||||||||||| ||||||
Sbjct 222 TTC-AAGGAGTCTCAGGC-AAAGATCGAGAAAGCTGGGGTTTCTGTGATGGTTTTACCCG 279
Query 176 GGAACCGCAAGCTCACCACGGCGTCGGCATGCCTTGGCAAGCTCGGGAA-GATCATCAG- 233
| ||| | | || | | || || ||| |||| |||| ||| || | || || |
Sbjct 280 GAAACTG--TGATC-CTTC--CG-AGGTATGGCTTGACAAGTTCGCCAAGGTTC-TC-GA 331
Query 234 GTGCCAGAGGAACGAC---GACCAGGTGGTGGTTCCAGTGCTCTATGGCGTCAGAAAAGT 290
|||||| |||||| || ||||||| ||||||| ||||| | || || | ||| | |
Sbjct 332 GTGCCAAAGGAACAACAAGGACCAGGCGGTGGTTTCAGTGTTGTACGGTGACAGTCTATT 391
Query 291 AAATGTCGAATGGCTTAGCGAGCTGAAGAAGATCACAGGCTTATCAC-ATTTCCACCAGT 349
| | | ||||||||||||||||| | | ||| ||||||||||| | || ||||| |
Sbjct 392 ACGGGACCAATGGCTTAGCGAGCTG--G-ATTTCAGAGGCTTATCACGAATT-CACCAAT 447
Query 350 CCAGGAAGGAATGCT-CCGACTCCGA-ACTTGTTGAAGAGATCGCT-AGAGATGTGTATG 406
||||||||||||| | |||| | | |||||| |||||||| | | ||||||||||| |
Sbjct 448 CCAGGAAGGAATG-TAGTGACT-CTATACTTGTAGAAGAGATTG-TGAGAGATGTGTACG 504
Query 407 AGAAGCTA-TACCATATTGGACGAATTGGAATCTACTCGAAGCTGCTGCAGATAGAAAAC 465
||| || | | || ||||||||||||||||||| |||||||||||| |||| ||||||
Sbjct 505 AGACGC-ACTTTTATGTTGGACGAATTGGAATCTATTCGAAGCTGCTGGAGATTGAAAAC 563
Query 466 ATGGTTAACAAACAACCGTTGGGTATCCGCTGTGTTGGAATCTGGGGTATGCCAGGCATA 525
||||||||||| |||||| | || ||||| ||||||||||| ||||||||||| ||||||
Sbjct 564 ATGGTTAACAAGCAACCGATAGGCATCCGTTGTGTTGGAATTTGGGGTATGCCTGGCATA 623
Query 526 GGGAAGACGACACTTGCTAAAGC-GTTTTTTGACCAAAAGTCTGGAAAATTTGATGCTTC 584
|| ||||| |||||||||||||| | | |||||||||| |||| | |||||||||||
Sbjct 624 GGAAAGACAACACTTGCTAAAGCAG-TCTTTGACCAAATGTCTAGCGCCTTTGATGCTTC 682
Query 585 TTGTTTTATCGAAGACTTTGACAAAGTTA-TTCATGAGAAGGGTCTTTATCGTTTATTGG 643
||||||||||||||||| ||||||| | | |||||||||||||||||||| |||| |||
Sbjct 683 TTGTTTTATCGAAGACTATGACAAA-TCAATTCATGAGAAGGGTCTTTATTGTTTGCTGG 741
Query 644 -GGAAACAATTTTTGAAAGAAAAGCCTCCTGATGGTGTTACCACTACAAAACTGAGCAT- 701
|||| ||| ||||| | || | |||| |||| || ||||||||| |
Sbjct 742 AGGAA-CAACTTTTGCCGGGCAA---T---GATGCA---ACCATTATGAAACTGAGC-TC 790
Query 702 GCTTAGATATAAATTAAAGAATAAGAGAGTCCTTGTTGTTCTTGATGATGTGTGCAATCC 761
||| ||| | | ||| || | ||||||||| ||||||||||| ||||| ||| ||||| |
Sbjct 791 GCTCAGAGACAGATTGAACAGTAAGAGAGTTCTTGTTGTTCTCGATGACGTGCGCAATGC 850
Query 762 TCTGGCTGCAGAGTCTTTTCTTGGAGGG-TTTGATTGGTTTGGTCCCGAAAGCCTGATCA 820
||||| || ||||| ||||| | |||| ||||| ||| | || |||| |||||||||||
Sbjct 851 TCTGGTTGGGGAGTCCTTTCTCG-AGGGGTTTGACTGGCTAGGACCCGGAAGCCTGATCA 909
Query 821 TCATAACCTCTAGAGATAAACAGGTGTTTCGCCTCTGTC--AAGTCGATCAAATATACGA 878
|||||||||||||||||||||| |||||| |||| || | || || |||||||||| ||
Sbjct 910 TCATAACCTCTAGAGATAAACAAGTGTTTTGCCTTTG-CGGAA-TCAATCAAATATATGA 967
Query 879 GGTTCAGGGTTTAAATGAGAAAGAGTCTCTTAAACTCATTTCGT--TGTATGTATTTAGA 936
||| ||||||||||||||||||||| ||| | |||| |||| | ||| || | || |
Sbjct 968 GGTCCAGGGTTTAAATGAGAAAGAGGCTCGTCAACT--TTTCTTGCTGTCTGCGTCTATA 1025
Query 937 AACGAC-A-A-GGAAGAGCGGAATCTCCCAG-AGCTGTCAATGAAAGTGATAAAATATGC 992
|| || | | || ||||| |||||||| || || ||||| ||| ||| ||||| |||||
Sbjct 1026 AAGGAGGATATGGGAGAGCAGAATCTCC-AGGAGTTGTCAGTGAGAGTAATAAATTATGC 1084
Query 993 TAGTGGACATCCGTTAGCTCTCAATATTTATGGCAGAGAGCTAAAAGGTAAGAAAAATCT 1052
|| |||| | ||||||||| ||| | ||||||| |||||||| |||||||||||||| ||
Sbjct 1085 TAATGGAAACCCGTTAGCTATCAGTGTTTATGGAAGAGAGCTGAAAGGTAAGAAAAAACT 1144
Query 1053 ATCAGAAATGGAGACTGCATTGCTCAGACTCAAGCAACGTCCTCCCGTCCAGATTTTTGA 1112
|||||||||||||||||||| |||| |||||||| ||||||||| | ||||| | ||
Sbjct 1145 CTCAGAAATGGAGACTGCATTCCTCAAACTCAAGCGACGTCCTCCATTTAAGATTGTCGA 1204
Query 1113 TGCATTCAAGAGCAGCTATGA 1133
|||||| || |||| ||||||
Sbjct 1205 TGCATTTAAAAGCACCTATGA 1225
Score = 431 bits (233), Expect = 4e-119
Identities = 433/524 (83%), Gaps = 35/524 (7%)
Strand=Plus/Plus
Query 2443 TCTCGTTTG-AGAAGTCTGCCAAACATGGCTAATTTAGAACTTCTCAAAGTTCTTGATCT 2501
||| ||||| || ||||||||||||||||||||||||| | ||| || |||||||||||
Sbjct 2277 TCTTGTTTGCAG-AGTCTGCCAAACATGGCTAATTTAG-A--TCTTAATGTTCTTGATCT 2332
Query 2502 CTCTGGTTGCTCAAGGCTCGCTACTATTCAGAGTTTCCCTCGTAACCTGAAAGAGTTATA 2561
||| ||||||||||| || | |||||||| ||||||||||| |||||| |||||||
Sbjct 2333 CTCGGGTTGCTCAAGTCTTAATTCTATTCAGGGTTTCCCTCGTTTTCTGAAACAGTTATA 2392
Query 2562 TCTTGCCGGCACTGCAGTAAGACAAGTGCCACAACTTCCTCAAAGTCTAGAATTCATGAA 2621
||||| ||||||||| ||||| ||||||||||||||||||||||||||||| || ||||
Sbjct 2393 TCTTGGTGGCACTGCAATAAGAGAAGTGCCACAACTTCCTCAAAGTCTAGAAATCTTGAA 2452
Query 2622 TGCGCATGGTTCTCGTTTGCGAAGTCTGTCAAACATGGCTAATTTAGAACTTCTCAAAGT 2681
||| ||||| ||| |||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 2453 TGCACATGGATCTTGTTTGCGAAGTCTGCCAAACATGGCTAATTTAGAATTTCTCAAAGT 2512
Query 2682 TCTTGATCTCTCTGGTTGCTCA-AGGCTAGATACTATTAAGGGTTTACCACGGAATCTAA 2740
|||||||||||||||||||||| || || || |||||| ||||||| || ||||| ||||
Sbjct 2513 TCTTGATCTCTCTGGTTGCTCAGAG-CTCGAGACTATTCAGGGTTTTCCTCGGAACCTAA 2571
Query 2741 AAGAGTTAGATATTGCTGGCAC-ATCGGTAAGAGGATTGCCACAACTTCCTCAAAGTCTA 2799
|||||||| || |||||||||| | || |||||| | |||| ||||||||| ||| |||
Sbjct 2572 AAGAGTTATATTTTGCTGGCACTA-CGTTAAGAGAAGTGCCCCAACTTCCTTTAAGCCTA 2630
Query 2800 GAACTCTTGAATTCACATGGCTGTGTATCTCTGACATCCATTCGTTTGGACTTCGAGAAG 2859
|| |||||||| ||||||| | | || ||| || | | | || | |
Sbjct 2631 GAGGTCTTGAATGCACATGG-T-T----CT--GAC-TC-----G---G-A----GA-A-G 2666
Query 2860 CTTCCTATGCATTACAATTTCAGTAATTGTTTT-GATCTATCTCCACAAGTGGTCAACAA 2918
||||||||||||||||| |||| |||| |||| |||||||||| ||||||||||||| |
Sbjct 2667 CTTCCTATGCATTACAAGTTCAACAATT-TTTTCGATCTATCTCAACAAGTGGTCAACGA 2725
Query 2919 TTTTTTAGTGAAAGCGTTGAATAATTTCAAATACATACCAAGAG 2962
||||||| ||||| || ||| | || | ||| ||||||||||||
Sbjct 2726 TTTTTTATTGAAAACGCTGACTTATGTAAAACACATACCAAGAG 2769
Score = 202 bits (109), Expect = 3e-50
Identities = 164/190 (86%), Gaps = 6/190 (3%)
Strand=Plus/Plus
Query 2259 TTTGCGAAGTCTGCCAAACATGGCTAACTTAGAACTTCTCAAAGTTCTTGATCTCTCTGG 2318
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 2468 TTTGCGAAGTCTGCCAAACATGGCTAATTTAGAATTTCTCAAAGTTCTTGATCTCTCTGG 2527
Query 2319 TTGCTCA-AGGCTCAATACTATTCAGAGTTTCCCTCGTAACCTGAAAGAGTTATATCTTG 2377
||||||| || ||| | ||||||||| |||| ||||| ||||| |||||||||||| |||
Sbjct 2528 TTGCTCAGAG-CTCGAGACTATTCAGGGTTTTCCTCGGAACCTAAAAGAGTTATATTTTG 2586
Query 2378 -TCGGCACTGCAGT-AAGACAAGTGGCACAACTTCCTCAAAGTCTAGAACTTTTGAATGC 2435
| |||||| | || |||| ||||| | ||||||||| ||| ||||| | ||||||||
Sbjct 2587 CT-GGCACTAC-GTTAAGAGAAGTGCCCCAACTTCCTTTAAGCCTAGAGGTCTTGAATGC 2644
Query 2436 ACATGGATCT 2445
|||||| |||
Sbjct 2645 ACATGGTTCT 2654
> AT5G45050.1 | Symbols: TTR1, ATWRKY16, WRKY16 | Disease resistance
protein (TIR-NBS-LRR class) | chr5:18176914-18181805 REVERSE
LENGTH=4221
Length=4221
Score = 889 bits (481), Expect = 0.0
Identities = 697/800 (87%), Gaps = 19/800 (2%)
Strand=Plus/Plus
Query 3058 CAGGAACTCAATAGAGCTCTGGCTTTCAGCTTCTGTGCGCCCTCGCATGCGATTCAGAAT 3117
||||||||||| | | || ||||||||||||||||||||||||| ||||||| ||| |||
Sbjct 2599 CAGGAACTCAACAAAACTTTGGCTTTCAGCTTCTGTGCGCCCTCACATGCGAATCAAAAT 2658
Query 3118 TCCACACTTGATCTGCAACAAGGATCTTCTGT-AATGGCACGACTGA-ATCCTTCTTGGA 3175
|||| |||||||||||||| |||||||||| | |||| ||||||| | ||||||||||||
Sbjct 2659 TCCAAACTTGATCTGCAACCAGGATCTTCT-TCAATGACACGACT-AGATCCTTCTTGGA 2716
Query 3176 GGAACACGCTTGTGGGCTTTGCTATGCTGGTGGAAGTTGCATTTTCTGAGGATTTCTATG 3235
||||||| |||||||||||||||||||||||| |||| |||||||| |||| || || ||
Sbjct 2717 GGAACACACTTGTGGGCTTTGCTATGCTGGTGCAAGTCGCATTTTCCGAGGGTTACTGTG 2776
Query 3236 ATGCTAATGGTTTTGGCATTAGATGTGTTTGCAGATGGAAAAACAAGGAAGGCCACTCTC 3295
||| || || |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 2777 ATGATACTGATTTTGGCATTAGTTGTGTTTGCAAATGGAAAAACAAGGAAGGCCACTCTC 2836
Query 3296 ATAAGATAGAAAGAAATTTGCATTGTTGGGCTCCAGGAAAAGCTGTTCCAAAACTTCTAA 3355
||| || ||||| ||||||||||||||||||| ||| ||||||||| | ||
Sbjct 2837 ATAGGAGAGAAATAAATTTGCATTGTTGGGCTTTAGGGAAAGCTGTT----GA-----AA 2887
Query 3356 ATGATCATATGTTTGTCTTCTTTGATGTCAACATGCGTCCAGGTACTGATGAAGGAAGTG 3415
||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| ||
Sbjct 2888 GGGATCATACGTTTGTCTTCTTTGATGTCAACATGCGTCCAGATACCGATGAAGGAAATG 2947
Query 3416 AACCCGATATATGCGCTGATTTTGTAGTGTTTGAATTCTTTCCTGTCGACAAGCAGACAA 3475
| |||||||| || |||||||| || || ||||| |||||||||||| | || |||| ||
Sbjct 2948 ACCCCGATATCTGGGCTGATTTAGTTGTTTTTGAGTTCTTTCCTGTCAATAAACAGAGAA 3007
Query 3476 AGCTTCTATATGATAGTTGCAAAGTGACAAAATGTGGAGTCCGTGTATTAACTGC--TAC 3533
||| |||| |||||||||||| |||||||| ||||||||||||| || ||||||| ||
Sbjct 3008 AGCCTCTAAATGATAGTTGCACAGTGACAAGATGTGGAGTCCGTTTAATAACTGCTGTA- 3066
Query 3534 AACTCGTGATACCAGCCTTGAGAATGTTTTACCAGTTTTGTCCTCT-GATCCAATGGAGT 3592
|||| | |||| || | |||||| | | |||||||||||||| | ||||| ||||||
Sbjct 3067 AACT-GCAATACAAGTATCGAGAATATATCACCAGTTTTGTCCT-TGGATCCGATGGAGG 3124
Query 3593 TTTCTGGTAATGAAGTTGAAGAAGTACCGAGAGTCAGTTATGATGGTTTACAGGAGATGT 3652
||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||| |
Sbjct 3125 TTTCTGGTAATGAAGATGAAGAAGTATTGAGAGTCAGATATGCTGGTTTACAGGAGATAT 3184
Query 3653 ATAAAGCTTTATTTCTTTACATAGCAGGTTTGTTCAATGACGAGGATGCTCGTTTGGTGG 3712
|||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||| |
Sbjct 3185 ATAAAGCTTTGTTTCTTTACATAGCGGGTTTGTTCAATGACGAGGATGTTGGTTTGGTAG 3244
Query 3713 CACGACTTATTGCTAAAATTATTGACATGGACGTTAGTTATGGGCTCAAGGTCTTAGCCG 3772
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3245 CACCACTTATTGCTAACATTATTGACATGGACGTTAGTTATGGGCTCAAGGTCTTAGCCT 3304
Query 3773 ATAGGTCTCTCATTCGTGTATCCTCCAACGGGGAAATAGTGATGCATTGTTTGCTACGAA 3832
||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||||
Sbjct 3305 ATAGGTCTCTCATACGTGTATCTTCCAATGGGGAAATAGTGATGCACTATTTGCTACGAC 3364
Query 3833 AAATGGGTAACGAAATCCTC 3852
|||||||||| |||||||||
Sbjct 3365 AAATGGGTAAAGAAATCCTC 3384
Score = 782 bits (423), Expect = 0.0
Identities = 916/1146 (80%), Gaps = 66/1146 (6%)
Strand=Plus/Plus
Query 4 ATCGTCTACATCAGCTGCGTAGATGAGGTACGGTACTCCTTCGTCAGCCACCTCTCCGAA 63
|||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||
Sbjct 19 ATCGTCTACATCAGCTGCATAGAGGAGGTACGATACTCCTTCGTCAGCCACCTCTCCAAA 78
Query 64 TCTCT-CTGCGAAAAAGGCATAAATGATGTGTTCGTCGATAGCGCCGACAAC-CTTTCGG 121
|||| | ||| |||||| |||| ||||| ||| ||||||||| || | |||||
Sbjct 79 GCTCTCCAGCG-AAAAGGTGTAAACGATGTCTTCATCGATAGCGATGA-TTCGCTTTCCA 136
Query 122 AGGAGGCCCAGGCAAAAGTCGAGAGAGCTAGGGTTTCTGTGATGGTTCTACCCGGGAACC 181
| ||| | || ||| ||||||||||||||||||||||| ||| || || || |||| |
Sbjct 137 ACGAGTCTCAATCAATGGTCGAGAGAGCTAGGGTTTCTGTTATGATTTTA-CCAGGAAAC 195
Query 182 GCAAGCTCACCACGGCGTCGGCATGC-CTTGGCAAGCTCGGGAA-GATCATCAG-GTGCC 238
| | | || | || || | |||| |||||||| ||| | || || | ||||
Sbjct 196 -C--G-T----AC-G-GT----AT-CTCTTGACAAGCTCGTGAAGGTTC-TC-GATTGCC 238
Query 239 AGAGGAACGACGACCAGGTGGTGGTTCCAGTGCTCTATGGCGTCAGAAAAGT-AAATG-T 296
||| |||| | || || ||||||||||| ||| | || || |||||| | | | | |
Sbjct 239 AGAAGAACAAAGATCAAGTGGTGGTTCCGGTGTTGTACGGTGTCAGATCA-TCAGA-GAC 296
Query 297 CGAATGGCTTAGCGAGCTGAAGAAGATC-ACAGGCTTATCA-CATTTCCACCAGTCCAGG 354
|||||||||||||| |||| | | || | ||| || ||| || | ||||| ||||||
Sbjct 297 CGAATGGCTTAGCGCGCTG--G-A-TTCGAAAGGATTCTCATCA-GTACACCATTCCAGG 351
Query 355 AAGGAATGCT-CCGACTCCGAACTTGTTGAAGAGATC-GCTAGAGATGTGTATGAGAAGC 412
|| ||||| | |||||| | ||||| |||||| | | ||||||||||||||||||||
Sbjct 352 AAAGAATG-TAGTGACTCCCAGCTTGTAAAAGAGA-CTGTTAGAGATGTGTATGAGAAGC 409
Query 413 TATACCATATTGG-ACGAATTGGAATCTACTCGAAGCTGCTGCAGATAGA-AAACATGGT 470
| | ||| ||| |||||||||||| || |||||||||||| |||| || ||| ||| |
Sbjct 410 TCTTTTATA-TGGAACGAATTGGAATATATTCGAAGCTGCTGGAGATTGAGAAA-ATGAT 467
Query 471 TAACAAACAACCGTTGGGTATCCGCTGTGTTGGAATCTGGGGTATGCCAGGCATAGGGAA 530
|||||| |||||||||| ||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct 468 TAACAAGCAACCGTTGGACATCCGTTGTGTTGGAATTTGGGGTATGCCTGGCATAGGCAA 527
Query 531 GACGACACTTGCTAAAGC-GTTTTTTGACCAAAAGTCTGGAAAATTTGATGCTTC-TTGT 588
||| |||||||||||||| | | |||||||||| |||||| | |||||||| || |||
Sbjct 528 GACTACACTTGCTAAAGCAG-TCTTTGACCAAATGTCTGGTGAGTTTGATGC-TCATTGC 585
Query 589 TTTATCGAAGACTTTGA-CAAAGTTATTCATGAGAAGGGTCTTTATCGTTTATTGG-GGA 646
||||| |||||| | | ||||| |||||| ||||||||| ||||| |||| ||| ||
Sbjct 586 TTTATTGAAGAC-TACACCAAAGCTATTCAAGAGAAGGGTGTTTATTGTTTGCTGGAGG- 643
Query 647 AACAATTTTTGAAAGAAAA-GCCTCCTGATGGTGTTACCACTACAAAACTGAGCATGCTT 705
|||| |||||||||||||| | || || | ||| |||| ||| ||| ||||| |||||
Sbjct 644 AACAGTTTTTGAAAGAAAATG-CTGGTGCTAGTGGTACCGTTACGAAATTGAGCTTGCTT 702
Query 706 AGATATAAATTAAAGAATAAGAGAGTCCTTGTTGTTCTTGATGATGTGTGCAATCCTCTG 765
|| ||| |||||| |||||||| || |||||||||||||||||||| ||| |||||||
Sbjct 703 AGGGATAGATTAAACAATAAGAGGGTTCTTGTTGTTCTTGATGATGTCCGCAGTCCTCTG 762
Query 766 GCTGCAGAGTCTTTTCTTGGAGGGTTTGATTGGTTTGGTCCCGAAAGCCTGATCATCATA 825
| || ||||||||||||||||||||||| |||||||||||| |||| || |||||||||
Sbjct 763 GTTGTGGAGTCTTTTCTTGGAGGGTTTGACTGGTTTGGTCCCAAAAGTCTAATCATCATA 822
Query 826 ACCTCTAGAGATAAA-CAGGTGTTTCGCCTCTGTCAAGTCGATCAAATATACGAGGTTCA 884
||||| | ||||||| | |||||||||||| |||| |||| |||||||||||||||||||
Sbjct 823 ACCTCCAAAGATAAATC-GGTGTTTCGCCTTTGTCGAGTCAATCAAATATACGAGGTTCA 881
Query 885 GGGTTTAAATGAGAAAGAGTCTCTTAAACTCATT-TCGTTGTATGTATTTAGAAACGACA 943
||||||||||||||||||| ||||| ||||| || || |||| || | || | |||| |
Sbjct 882 GGGTTTAAATGAGAAAGAGGCTCTTCAACTC-TTCTCTTTGTGTGCGTCTATAGACGATA 940
Query 944 AGGAAGAGCGGAATCTCC-CAGAGCTGTCAATGAAAGTGATAAAATATGCTAGTGGACAT 1002
|| ||||| |||||||| | ||| ||||||||||||| || |||||||||| ||| |||
Sbjct 941 TGGCAGAGCAGAATCTCCAC-GAGGTGTCAATGAAAGTTATTAAATATGCTAATGGCCAT 999
Query 1003 CCGTTAGCTCTCAATATTTATGGCAGAGAGCTAAAAGGTAAGAAAA-ATCTATCAGAAAT 1061
|| |||||||||||| | ||||||||||| || | || ||||||| | | | |||||||
Sbjct 1000 CCATTAGCTCTCAATCTCTATGGCAGAGAACTGATGGGGAAGAAAAGACC-ACCAGAAAT 1058
Query 1062 GGAGACT-GCATTGCTCAGACTCAAGCAACGTCCTCCCGTCCAGATTT-TTGATGCATTC 1119
||||| | ||||| |||| ||||||| || ||||||| | | | ||| |||||||| ||
Sbjct 1059 GGAGA-TAGCATTCCTCAAACTCAAGGAATGTCCTCCAG-CTATTTTTGTTGATGCAATC 1116
Query 1120 AAGAGC 1125
||||||
Sbjct 1117 AAGAGC 1122
Score = 252 bits (136), Expect = 3e-65
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 2443 TCTCGTTTGAGAAGTCTGCCAAACATGGCTAATTTAGAACTTCTCAAAGTTCTTGATCTC 2502
||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 2203 TCTCGTTTGCGAAGTCTGCCAAACATGGTTAATTTAGAACTTCTCAAAGCCCTTGATCTT 2262
Query 2503 TCTGGTTGCTCAAG-GCTCGCTACTATTCAGAGTTTCCCTCGTAACCTGAAAGAGTTATA 2561
||||||||||| || ||||| ||||| ||| ||||||| || |||||||||||||||||
Sbjct 2263 TCTGGTTGCTC-AGAGCTCGAGACTATCCAGGGTTTCCCACGGAACCTGAAAGAGTTATA 2321
Query 2562 TCTTGCCGGCACTGCAGTAAGACAAGTGCCACAACTTCCTCAAAGTCTAGAATTCATGAA 2621
||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 2322 TCTTGTTGGCACTGCAGTAAGACAAGTGCCACAACTTCCTCAAAGTCTAGAATTCTTTAA 2381
Query 2622 TGCGCATGGTT 2632
||| |||||||
Sbjct 2382 TGCCCATGGTT 2392
> AT5G45240.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) | chr5:18313706-18319089 FORWARD LENGTH=2439
Length=2439
Score = 207 bits (112), Expect = 7e-52
Identities = 181/213 (85%), Gaps = 10/213 (5%)
Strand=Plus/Plus
Query 4540 GATAGTTGGCCGAACCATCCTGGTGG-GATCTTCACGTC-CATCATGAGAGTAGACATGT 4597
||||| |||| |||||| ||| | || ||||| ||| || | ||||||||||||||||||
Sbjct 1894 GATAGCTGGCAGAACCACCCT-GAGGAGATCTCCACTTCTC-TCATGAGAGTAGACATGT 1951
Query 4598 CTGGTAACAGTTTC-AAGAGTCTTCCAGACACATGGACTTCCATTCAACCAAAAGACCTT 4656
||||||||||||| || || ||||||||||||||||||||||||||||||||||| |||
Sbjct 1952 CTGGTAACAGTTTTGAA-AGACTTCCAGACACATGGACTTCCATTCAACCAAAAGATCTT 2010
Query 4657 ATC-TTCAATAATTGCAGAAATCTTGCGTCACTGCCAGAGCTTCCTGCGTCGCTCTC-CA 4714
||| || ||| |||| |||||| | |||||| |||||||| ||||| ||||||| |
Sbjct 2011 ATCCTTGG-TAACTGCAAAAATCTCGTGTCACTACCAGAGCTCCCTGCAACGCTCTCTC- 2068
Query 4715 TGCTAATGGCTAATAATTGTGGATCACTTGAGA 4747
|||||| ||| |||||||||| |||||||||||
Sbjct 2069 TGCTAACGGCAAATAATTGTGTATCACTTGAGA 2101
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 275416517070
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5