BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915593
Length=3486
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 2702 0.0
AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-N... 1387 0.0
AT4G19530.1 | Symbols: | disease resistance protein (TIR-NBS-L... 178 3e-43
> AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18182038-18186495 FORWARD LENGTH=3926
Length=3926
Score = 2702 bits (1463), Expect = 0.0
Identities = 2895/3556 (81%), Gaps = 220/3556 (6%)
Strand=Plus/Plus
Query 31 CCC-CCGCAACATCTAGTGTTCATCAATTTTCGTGGGGCGGATATACG-CTTTGGATTCG 88
||| || ||||||| ||| ||||||||||| ||||| | ||| |||| | | |||||||
Sbjct 30 CCCACCACAACATCAAGTATTCATCAATTTCCGTGGAGAAGATTTACGAC-TCGGATTCG 88
Query 89 TCAGCCATCTCGTCGAAGCCTTCAAAAAAC-ATAAAATTAATTTCGTTTA-CGACGACTA 146
| |||||||| || |||| ||| | ||||| |||| || || || || | |||| ||||
Sbjct 89 TAAGCCATCTAGTAGAAG-CTTTAGAAAACGATAACATAAAAGTC-TTCATCGACAACTA 146
Query 147 TGAAGACAGAGGCCAACCCATAGAAATTCTACTGACGAGGATAGA-GCAGTCGAGAATCG 205
| ||||| |||| |||| |||||| || | || | |||| | | | || | |||||
Sbjct 147 CGCAGACAAAGGCGAACCTTTAGAAACACTTTTAACCAAGATACATG-ACTCCAAAATCG 205
Query 206 CTCTAGCAATATTCTCCGGCAAGTACACTGAGTCATTTTGGTGTTTGGA-AGAG-TTGAC 263
||||||| || |||||||| ||||||||||| ||| ||||| || || |||| | | |
Sbjct 206 CTCTAGCTATCTTCTCCGGGAAGTACACTGAATCAACATGGTGCTT-GAGAGAGCTAG-C 263
Query 264 GAAGATCAGGA-ATTGTGAGAAGGAAGGCAAACTCGTGGCTATTCCCATCTTCTACAAGG 322
|| ||| | | |||||| | || |||| ||||| || |||||||| |||||||||||||
Sbjct 264 GATGAT-AAAAGATTGTGTGGAGAAAGGTAAACTTGTTGCTATTCCTATCTTCTACAAGG 322
Query 323 TGGAGCCATCGACGGTTAGA--TATTTGATGGGAGAATTTGGTGATAG-TTTTAGGAG-T 378
| || ||||| || |||||| | || || ||| | || |||||| | ||||| ||| |
Sbjct 323 TAGATCCATCCACTGTTAGAGGTGTTAGA-GGG-CAGTTCGGTGAT-GCTTTTA-GAGAT 378
Query 379 C-TGCCTAA-G-GATGATGA-GAAGAA-AAAGGAGTGGGAGGAAGCTTTGAATGT-TATT 432
| || || | |||| ||| ||||| ||| |||||| | |||||||||| || |||
Sbjct 379 CTTGAGGAACGTGATG-TGATTAAGAAGAAA-GAGTGGAAACAAGCTTTGAA-GTGGATT 435
Query 433 CCTGG-TATAATGGGCATCATTG-TCAATGAGAGAAGCTCC-GAGAGCGAAATAATCaaa 489
||||| | |||| || |||| || || | || | ||| ||| ||||| |||||| ||||
Sbjct 436 CCTGGCT-TAATTGGTATCACTGTTC-ACGATAAAAG-TCCTGAGAGTGAAATACTCAAC 492
Query 490 aaaaTTGTGGAGGATGTTAAGAAAGTGCTGTA-CAAGTTTCCATCGGAGGAAAGCCAAAA 548
|||| || |||| |||||||||||| || | |||||| ||| ||||| |||||||||
Sbjct 493 GAAATCGTTAAGGAGGTTAAGAAAGTGTTGAAGAAAGTTT-CATTGGAGGGAAGCCAAAA 551
Query 549 ---GGCCTCTGTGGTTCCTTTAGAAAACAGTAACACTGTAACTTTC--TCAGGAAAAGAA 603
|| |||||||| ||| | | ||| | | ||||| ||| ||| | |||| |||
Sbjct 552 GGTGGTCTCTGTGGATCCATCACAAAGTATTGACACTCTAA-GTTCGGT-AGGAGGTGAA 609
Query 604 AAGCATAAGACTTTTGGAAACGAACAACGTTTGAAGGAGTTGGAAGAGAAGTTGGATGTT 663
||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||| ||
Sbjct 610 AAGGATAAGACTTTTGGAATCAAACAACGGTTGAAGGAGTTGGAAGAGAAGTTGGATCTT 669
Query 664 GATAGATACAAGGGAACTCGCATCATCGGAGTTGTAGGGATGCCCGGAATTGGTAAAACA 723
| || ||||||||||||||| |||| |||||||| |||||||| |||||||| |||||
Sbjct 670 GTTAAATACAAGGGAACTCGTGTCATTGGAGTTGTTGGGATGCCTGGAATTGGCAAAACC 729
Query 724 ACACTGCTGAAAGAGCTCT-T-CGACTTGTGGCAGCGTAAGTTTAAC-AGCCGGGCATTT 780
|||||| |||||||||||| | ||| |||||| | |||||| | || || ||
Sbjct 730 ACACTGGTGAAAGAGCTCTATAAGAC--CTGGCAGGGCAAGTTT-TCGAGGTATGCGTTG 786
Query 781 ATCGATCAAATCCGTGAAAACTCAAATGAC-CCTGGCTTGGATTCCCTGCCGCA-AATGC 838
|||||||||||||||| || |||||| || | || || || | | |||| | |||
Sbjct 787 ATCGATCAAATCCGTGGGAAGTCAAATAACTTCAGG-TTAGAGTGCTTGCC-TACTTTGC 844
Query 839 TCTTAGGAG-AGTTACTACCATCA-TTGAA-AGATCCTGAGA-TAGATGATG-A-TGAAG 892
| ||| ||| || ||||||| | ||||| | ||||| | | ||||| | | | |||||
Sbjct 845 TTTTA-GAGAAGCTACTACC-GGAGTTGAATA-ATCCTCA-ACTAGAT-A-GTATTGAAG 898
Query 893 ACCCCTACAGAAAGT-ACAAGGATCAACTGC-TCGAACGGAGAGTTCTTGT-GATTCTTG 949
| || |||| ||| | | |||| || ||||| | ||||| | |||||| || | | ||||
Sbjct 899 AACCATACA-AAACTCATAAGGGTCTACTGCGT-GAACGCAAAGTTCTCGTCG-TCCTTG 955
Query 950 ATGATGTTAGTAAAAGTGAACAAATAGACGCTCTT-TTCCGG----A-G------AC-G- 995
|||||||||||| ||| ||||||||| | |||||| || || | | || |
Sbjct 956 ATGATGTTAGTAGAAGGGAACAAATATATGCTCTTCTT-GGGAAATATGATCTTCACAGT 1014
Query 996 ---C--GATTGGATTAGTGAAGGGAGCAGGATTGTCATTGCAACAAACGACATGTCCTTA 1050
| || ||||| | || || |||||||| |||||||||| ||||| || |||| |
Sbjct 1015 AAACATGAGTGGATCAAAGATGGCAGCAGGATCATCATTGCAACGAACGATATCTCCTCA 1074
Query 1051 CTAAAGGGTCTGGTTCAGGATACTTACGTTGTCCGGCAATTGAACCACCA-AGACGGCAT 1109
| |||||||| ||||| || ||||| || || |||||||| ||||| || ||||||| |
Sbjct 1075 TTGAAGGGTCTCGTTCATGACACTTATGTGGTTCGGCAATTAAACCA-CAGAGACGGCTT 1133
Query 1110 GGATCTTTTTCACTATCATGCCTTT-AATAGTAAT-AGAGCCACTCCTCCCAAGG-GAGA 1166
| ||||||| |||||| |||||| | || | || | |||||||||||| |||| | ||
Sbjct 1134 ACAACTTTTTCGCTATCACGCCTTTCATTA-TGATCA-AGCCACTCCTCCAAAGGTG-GA 1190
Query 1167 TTTCAACAAGATGTCAGAAGA-TTTCGTTCATTATGCAAAAGGCCATCCACTAGCTCTCA 1225
||||| ||| | || || || ||| || |||||||| | ||||||||||||||||||||
Sbjct 1191 TTTCATGAAGCTTTCTGATGAGTTT-GTGCATTATGCTAGAGGCCATCCACTAGCTCTCA 1249
Query 1226 AAATATTGGGAATAGAACTTTGTGGGAAAGAA-A-GGACCACGTGGGAAGA-AAAACTGA 1282
|||||||||| | ||| |||| || |||| || | | | || |||||| | ||||||||
Sbjct 1250 AAATATTGGGTAGAGAGCTTTATGAGAAA-AATATGAAGCA-TTGGGAA-ACAAAACTGA 1306
Query 1283 -AGTTACTCGCTAAAAGTCCCAGCC-CTTATATTGGAAG-TGTCTTGCAAGTAAGTTATG 1339
| |||| ||| ||||||||| || |||||||||| || ||| |||||||||||||||
Sbjct 1307 TA-ATACTTGCTCAAAGTCCCA-CCACTTATATTGG-AGAAGTCGTGCAAGTAAGTTATG 1363
Query 1340 AAGAATTGAGTCCAGG-GCAAAAAGACGCCTTTCTCGACATAGCCTGTTTCAGATCGGAG 1398
| ||||||||| || ||| ||||| || |||||||||||||| ||||||||||| ||
Sbjct 1364 ATGAATTGAGT-TTGGCGCAGAAAGATGCATTTCTCGACATAGCTTGTTTCAGATCACAG 1422
Query 1399 GATGTGGATTATGTAGAAAGTTTACTGGCTTCATCTGACCTTGGATCTGCTGAAGCAATG 1458
|||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||
Sbjct 1423 GATGTGGATTATGTAGAAAGTTTACTGGTTTCGTCTGACCCTGGATCTGCTGAAGC---- 1478
Query 1459 AATGCAGTAAAAGCTCTCGCAG-ATAAGTGCCTGATTAATACTTGTGACGGCCGAGTGGA 1517
| | ||||||||||| || |||||| | ||||| |||| ||||||||||| |||||
Sbjct 1479 -A---A-TAAAAGCTCTC-AAGAATAAGTTCTTGATTGATACATGTGACGGCCGTGTGGA 1532
Query 1518 AATGCATGATCTACTCTATACATTTGCCAGGGAACTTGATTC-TAAAGCATCCACT---- 1572
|||||||||||||| |||| |||| | ||||||||||| || |||||||||||||
Sbjct 1533 GATGCATGATCTACTGTATAGATTTTCTAGGGAACTTGA-TCTTAAAGCATCCACTCAAG 1591
Query 1573 -T-GTAGCAGAGAACGGAGGCTGTGGCACCATAAAGAGCTTATCAGGGGAGGCGATGTTG 1630
| |||||| | |||| ||| | ||| || | |||| | || | | ||
Sbjct 1592 GTGGTAGCAAACAACGAAGGTTATGGGTCCGTCAAGA-C--AT------A----A--TTA 1636
Query 1631 ATGTACTGCA-AAATA-AGATGAGAGCTGCCAATGTCAGAGGTATTTTCCTAGATTTGTC 1688
|||||| ||| ||| | | ||| ||||||| ||||| |||||||||||||||||||||||
Sbjct 1637 ATGTACAGCAGAAA-ACA-ATGGGAGCTGCAAATGTTAGAGGTATTTTCCTAGATTTGTC 1694
Query 1689 TGAAGTCAAAGG-CGAAACAAGCTTAGACAAAGATCACTTCAA-ATGTATGAC-TAAACT 1745
|||||| |||| ||||||||||||||| || |||||||| | |||| | || ||
Sbjct 1695 TGAAGT-GAAGGTTGAAACAAGCTTAGACCGTGAACACTTCAAGA-ATATG-CGCAATCT 1751
Query 1746 TCGGTATCTCAAGTTCTACAATTCTCATTGTCCACACAAATGTAAAACCAATAATAAAAT 1805
|||||||||||||| |||||||| ||||| || ||| ||||| |||||||||||| ||
Sbjct 1752 CCGGTATCTCAAGTTATACAATTCACATTGCCCTCACGAATGTCTAACCAATAATAAGAT 1811
Query 1806 AAACAT-CCTTGATGGACTT-ATGCTGA-CATTGAAAGAGGTCCGATGCCTCCACTGGCT 1862
|||||| || |||||||||| | ||| | ||||||||||||| |||||||| ||||||||
Sbjct 1812 AAACATGCC-TGATGGACTTGA-GCT-ACCATTGAAAGAGGTTCGATGCCTTCACTGGCT 1868
Query 1863 AAAATTCCCATTGGAGAAACTTCCAAACGATTTCT-ATCCAAATAATCTCGTCGACCTTA 1921
||||||||||| ||| |||||||||||||||| | | || | |||||||||||||||||
Sbjct 1869 GAAATTCCCATTAGAGGAACTTCCAAACGATTT-TGACCCGATTAATCTCGTCGACCTTA 1927
Query 1922 AGCTGCCCTACAGTGAGATTGAACAACTTTGGGAGGGTGACAAGGATATACCAGTCTTAA 1981
||||||| |||||||||||||||| ||||||||| |||| ||||||| |||||||||||
Sbjct 1928 AGCTGCCATACAGTGAGATTGAACGACTTTGGGATGGTGTTAAGGATACACCAGTCTTAA 1987
Query 1982 AATGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGATTATCAAAGGCTC 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1988 AATGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGATTATCAAAGGCTC 2047
Query 2042 AAAATCTTCAA-GTGTTAAATCTTGAAGGTTGCACAAGTCTCAAATCTCTTGGAGATGTG 2100
||||||||||| | | || |||||||| ||||||||||| |||||||| ||||||||
Sbjct 2048 AAAATCTTCAAAGACTGAAC-CTTGAAGGGTGCACAAGTCTTGAATCTCTTCGAGATGTG 2106
Query 2101 AATTCGAAATCTCTT-AAAACTCTCACCCTCAGCGGCTGCTCAAACTTCAAGGAATTTCC 2159
|||| || ||| || |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2107 AATTTGACGTCT-TTGAAAACTCTCACCCTCAGCAACTGCTCAAACTTCAAGGAATTTCC 2165
Query 2160 TTTAATTCCAGAAAATCTAGAAGCTTTATACTTGGACGGAACAGCAATAAGTCAACTTCC 2219
|| |||||||||||| || ||||||||||||||||||| ||| | ||||||||||||||
Sbjct 2166 ATTGATTCCAGAAAATTTAAAAGCTTTATACTTGGACGGGACATCGATAAGTCAACTTCC 2225
Query 2220 TGATAACTTGGTGAACCTCCAGAGACTTGTCTCATTGAATATGAAAGACTGTCAAAA-GC 2278
||| ||| ||| ||||||| | |||||||||| |||||||||||| ||||| |||| ||
Sbjct 2226 TGACAACGTGGGGAACCTCAAAAGACTTGTCTTATTGAATATGAAGGACTG-CAAAGTGC 2284
Query 2279 TGAAGAATATCCCAACCTTTGTCGGTGAGCTGAAATCTCTTCAAAAACTGGTACTCTCTG 2338
|| ||| |||||| |||| ||| ||||||||||| ||||||||||||| ||||| || |
Sbjct 2285 TGGAGACTATCCCTACCTGTGTTAGTGAGCTGAAAACTCTTCAAAAACTTGTACTTTCAG 2344
Query 2339 GTTGTTTAAAGCTCAAGGAATTTTCAGAAATCAACAAGAGCTCTTTAAAATTTTTACTTC 2398
|||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 2345 GTTGTTCAAAGCTCAAGGAATTTCCAGAAATCAACAAGAGCTCTTTAAAAATTTTACTTC 2404
Query 2399 TGGATGGGACGTCCATCAAAACCATGCCACAGTTACCCTCAGTGCAGTATTTATGCTTAA 2458
| |||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||
Sbjct 2405 TAGATGGGACATCCATCAAAACGATGCCGCAGTTACCCTCAGTACAGTATTTATGCTTAA 2464
Query 2459 GCAGAAATGATAATCTCAGCTACCTTCCAGCTGGCATCAATCAACTTTCTCAATTAACAC 2518
||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||
Sbjct 2465 GCAGAAATGATCATCTCATCTACCTTCCAGCTGGCATCAATCAAGTTTCTCAGTTAACAC 2524
Query 2519 GGCTGGATTTGAAGTATTGTAAGAAGCTTACATCTATTCCAGAGTTGCCACCAAATCTTC 2578
||||||||||||||||||||| ||||||||||| | |||||||||||||||||| ||| |
Sbjct 2525 GGCTGGATTTGAAGTATTGTACGAAGCTTACATATGTTCCAGAGTTGCCACCAACTCTCC 2584
Query 2579 AGTACTTAGATGCACACGGCTGTAGCTCACTGAATACTGTCGCAAAACCGCTCGCCCGTA 2638
|||||||||||||||| ||||||||||||||||| | ||| |||||||| || |||||||
Sbjct 2585 AGTACTTAGATGCACATGGCTGTAGCTCACTGAAGAATGTTGCAAAACCACTGGCCCGTA 2644
Query 2639 TCATGCCGACCGTGCAGAACCGTTGCACTTTCAATTTCACCAACTGTGATAACCTGGAGC 2698
||||| | ||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct 2645 TCATGTCAACCGTGCAGAACCATTACACTTTCAATTTCACCAACTGTGGTAACCTGGAGC 2704
Query 2699 AAGCTGCAATGGATGAAATCACATCGTTTGCTCAAAGTAAATGCCAGTTTCTATCAGATG 2758
||||||||| ||| ||||||||||||| ||||||||| ||||| ||||| || |||||||
Sbjct 2705 AAGCTGCAAAGGAGGAAATCACATCGTATGCTCAAAGAAAATGTCAGTTGCTGTCAGATG 2764
Query 2759 CTCGTAAACACTACAATGAGGGTTTTAGTTCAGAGGCTTTGTTCACCACTTGCTTTCCTG 2818
| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 2765 CACGTAAACACTACAATGAGGGTT------CAGAGGCTTTGTTCAGCACTTGCTTTCCTG 2818
Query 2819 GATGTGAGGTGCCTTCGTGGTTTTCTCATGAAGAAAGA-GGATCTCTGATGCAACGAAAA 2877
||||||||||||||||||||||| |||||||| | ||||||||| ||||| |||||
Sbjct 2819 GATGTGAGGTGCCTTCGTGGTTTGGTCATGAAGCG-GTTGGATCTCTGTTGCAAAGAAAA 2877
Query 2878 CTCCTCCCACATTGGCATGACAAGAGCCTTTCTGGGATAGCTCTATGTGCTGTAGTCTCA 2937
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 2878 CTCCTCCCACATTGGCATGACAAGAGGCTTTCTGGAATAGCTCTATGTGCTGTAGTCTCA 2937
Query 2938 TTTCCTG-CTGGCCAA-ACTCAAATCAGCAGCTTCTCGGTGGCATGCACCTTTACGATAA 2995
||||||| | | |||| | |||| ||||| ||||||||||| |||||||||||| ||||
Sbjct 2938 TTTCCTGACAG-CCAAGA-TCAACTCAGCTGCTTCTCGGTGACATGCACCTTTAAAATAA 2995
Query 2996 AAGTTCAAGAAAAGTCTTGGATCCCCTTTACTTGCCAGGTAGGAAGTTGG----GAG-GG 3050
||| | |||| ||||||||| ||||||||||||||| |||||||| |||| ||| ||
Sbjct 2996 AAGCTGAAGACAAGTCTTGGGTCCCCTTTACTTGCCCGGTAGGAATTTGGACTAGAGAGG 3055
Query 3051 -AGACAAGGAAGACAAGATTGAGTCAGATCATGTTTTTATAGCCTACATTACTTGCCCAC 3109
| ||||| |||||| ||||||||| ||||||||||| ||||||||||||| | ||||||
Sbjct 3056 GAAACAAGAAAGACAGGATTGAGTCGGATCATGTTTTCATAGCCTACATTAGTAGCCCAC 3115
Query 3110 ATACGATAAGGTGTCTCGAAGATGA-GAACTCTGATAAATGCAATTTTACTGAAGCCTCT 3168
|| | ||||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 3116 ATTCAATAAGGTGTCTCGAAGA-GAAGAACTCTGATAAATGCAATTTTAGTGAAGCCTCC 3174
Query 3169 CTTGAGTTTAATGTGACTGGTGGTACAAGTGAG-ATAGGAAAATTCACGGTGTTGAGGTG 3227
|||||||||| ||||| ||| |||||||| | || ||| ||||| ||| |||| |||
Sbjct 3175 CTTGAGTTTACGGTGACAAGTGATACAAGTG-GTATTGGAGTATTCAAGGTTTTGAAGTG 3233
Query 3228 CGGCTTAAGTTTGGTTTATGCAAAA-GATAACAACAGAAACAGTTCTCATGAAGCAAAGT 3286
|| || |||||||| |||| |||| || || |||| ||||||||||| ||| |||||||
Sbjct 3234 TGGATTGAGTTTGGTGTATG-AAAATGACAAAAACAAAAACAGTTCTCTTGAGGCAAAGT 3292
Query 3287 ATGATATGCCTGTTGAAGTAAACTTTCAAGAACCTCAACATGGGATGAA-GGAGGagaaa 3345
||||| | ||||||||||| | |||||||||||| |||| ||||| || ||||||| |
Sbjct 3293 ATGATGTTCCTGTTGAAGTGAGCTTTCAAGAACCAGAACACGGGAT-AATGGAGGAGGAG 3351
Query 3346 agaaa-actaaa-agata-aagaattcatgatagacgaccaaagaagaa-acggaaaaac 3401
||| | | |||| | | | ||||| | |||||||||||||||| ||||| | |||| | |
Sbjct 3352 AGATATA-TAAACAAA-AGAAGAAGTGATGATAGACGACCAAAAAAGAAGA-GGAAGA-C 3407
Query 3402 agaa-gG--TG-TG--A--A-AATGTCTAGTGACACTCATACTTGTGGTGCAAGTGTAAC 3452
| || || || | | | ||| || | || |||||| ||||||| | |||||||||
Sbjct 3408 AAAAAGGGATGATATTATGATAATATCCACTGTCACTCAAACTTGTGTTCCAAGTGTAAA 3467
Query 3453 TCCAAGAATGGGAGAT 3468
| ||||||| | ||||
Sbjct 3468 TGCAAGAATAGAAGAT 3483
> AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18321914-18326022 REVERSE LENGTH=3654
Length=3654
Score = 1387 bits (751), Expect = 0.0
Identities = 1701/2139 (80%), Gaps = 148/2139 (7%)
Strand=Plus/Plus
Query 13 TCCACGGTCGAAGAAC-GGCCCCCGCAACATCTA-GTGTTCATCAATTTTCGTGGGGCGG 70
||||| || |||| || ||| ||||| |||| | |||||||||||||| |||||||| |
Sbjct 19 TCCACTGTGGAAG-ACAAGCCACCGCAGCATC-AGGTGTTCATCAATTTCCGTGGGGCAG 76
Query 71 ATATACGCTTTG-GATTCGTCAGCCATCTCGTCGAA--GCCTTCAAA--AAACATAAAAT 125
|| | ||| | ||||||||||||||||||| || ||||| ||| ||| || ||
Sbjct 77 ATTTGCGC-CGGAGATTCGTCAGCCATCTCGT--AACGGCCTTGAAATTGAAC--AACAT 131
Query 126 TAATTTCGTTTA-CGACGACTATGAAGACAGAGGCCAACC-CATAGAAATTCTACTGACG 183
|| || |||| ||||||||||||||||||||| ||||| | |||| | || |||| |
Sbjct 132 CAACGTC-TTTATCGACGACTATGAAGACAGAGGTCAACCTC-TAGATGTACTGCTGAAG 189
Query 184 AGGATAGAGCAGTCGAGAATCGCTCTAGCAATATTCTCCGGCAAGTACACTGAGTCATTT 243
||||||||| |||| | ||||| | | || || ||||||||||| ||||| |||||| |
Sbjct 190 AGGATAGAGGAGTCCAAAATCGTTTTGGCTATCTTCTCCGGCAACTACACCGAGTCAGTC 249
Query 244 TGGTGTTTGGA-AGAG-TTGACGAAGATC-AGGAATTGTGA-GAAGGAAGGCAA-ACTCG 298
||||| | || |||| | || ||||||| | | ||||| | | | ||||| || |||||
Sbjct 250 TGGTGCGT-GAGAGAGCTGGA-GAAGATCAAAG-ATTGT-ACGGATGAAGG-AACACTCG 304
Query 299 TGGCTATTCCCATCTTCTACAAGGTGGAGCCATCGACGGTTAGATATTTGATGGGAGAA- 357
| || ||||| |||||||||||| |||||||||| || |||||| |||||| ||| ||
Sbjct 305 TTGCGATTCCAATCTTCTACAAGCTGGAGCCATCCACCGTTAGAGATTTGAAAGGA-AAG 363
Query 358 TTTGGTGATAGTTTTAGGAGTCTGCCTAAGGATGATGAGAAGAAAAAGGAGTGGGAGGAA 417
|| |||||||| ||||||||| || |||||| |||||||| ||||||| | ||| |||||
Sbjct 364 TTCGGTGATAGATTTAGGAGTATGGCTAAGGGTGATGAGAGGAAAAAGAAATGGAAGGAA 423
Query 418 GCTTTGAATGTT-ATTCCTGGTATAATGGG---CATCATTGTCAATGAGAGAAGCT-CCG 472
||||| || || |||||| || ||||| |||||||| ||| || | ||| | |
Sbjct 424 GCTTTTAA-CTTGATTCCTAACATTATGGGCATCATCATTGACAA-GA-A-AAG-TGTGG 478
Query 473 AGAGCGA-AATAATCaaaaaaaTTGTGGAGGATGTTAAGAAAGTGCTGTACAAG-TTTCC 530
|||| || || | |||| |||||||| ||| || |||| || | || || | | ||
Sbjct 479 AGAGTGAGAA-AGTCAATGAAATTGTGAAGGCGGTGAAGACAGCGTTG-ACCGGAATACC 536
Query 531 ATCGGAGGAAAGCCAAAAGGCC-TCTGTGGTTCCTTTAGAAAACAGTAACACTGTAACTT 589
| |||||| ||| || || ||| || |||| | |||||| || || ||| ||| |||||
Sbjct 537 ACCGGAGGGAAGTCACAACGCCGTC-GTGGGTGCTTTAGGTAATAGCAACGCTGGAACTT 595
Query 590 TCTCAGGA-AAAGAAAAGCATAAGACTTTTGGAAACGAACAACGTTTGAAGGAGTTGGAA 648
||||||| | | |||||||| |||||||||||||||||||||| || || || ||||||
Sbjct 596 CCTCAGGAGACA-AAAAGCATGAGACTTTTGGAAACGAACAACGGTTAAAAGATTTGGAA 654
Query 649 GAGAAGTTGGAT-GTTGATAGATACAAGGGAACTCGCATCATCGGAGTTGTAGGGATGCC 707
|||||||||||| | ||||| ||||||||||||||| ||||| |||||||| ||||||||
Sbjct 655 GAGAAGTTGGATCG-TGATAAATACAAGGGAACTCGTATCATTGGAGTTGTTGGGATGCC 713
Query 708 CGGAATTGGTAAAACAACACTGCTGAAAGAGCTCT-T-CGACTTGTGGCAGCGTAAGTTT 765
||||||||||||||| ||||| ||||||||||| | | ||| ||||||| | ||||||
Sbjct 714 CGGAATTGGTAAAACCACACTCCTGAAAGAGCTATATAAGAC--GTGGCAGGGCAAGTTT 771
Query 766 AAC-AGCCGGGCATTTATCGATCAAATCCGTGAAAACTCAAATGAC-CCTGG-CTTGGAT 822
| || | || | |||||||||||||||| ||| || || | | | ||| |||||
Sbjct 772 -TCGAGGCATGCGCTAATCGATCAAATCCGTGTAAAGTCCAA-G-CACTTGGAGTTGGA- 827
Query 823 TC-CCTGCCGCAAATGCTCTTAGGAGAGTTACTACCATCA-TTGAAA-GATCCTGA-GAT 878
|| | |||| |||||||||||||| ||||| | ||| | || ||| ||||| | | |
Sbjct 828 TCGCTTGCCTCAAATGCTCTTAGGCGAGTT-GT-CCA--AGTT-AAACCATCCTCACG-T 881
Query 879 AGATGATGAT-GAAGACCCCTACAGAAAGTACAAGGATCAACTGC-TCGAACGGAGAGTT 936
||| || | |||| | | | ||| | | |||||||| | ||||| | |||
Sbjct 882 AGACAAT-CTCAAAGA----T-C---CA-TAC-A-G-TCAACTGCAT-GAACGCAAAGTG 927
Query 937 CTTG-TGATTCTTGATGATGTTAGTAAAAGTGAACAAATAGACGCTCTTTTCCG-GAG-- 992
|||| || | |||||||||||||||||||| ||||||||||| |||| || || |||
Sbjct 928 CTTGTTG-TACTTGATGATGTTAGTAAAAGGGAACAAATAGATGCTC--TT-CGTGAGAT 983
Query 993 ACGCGATTGGATT----A--GT--GAAGGG-AGCAGGATTGTCATTGCAACAAACGACAT 1043
|| || |||||| | || | |||| |||||| ||||||||||||||| ||||||
Sbjct 984 ACTAGACTGGATTAAGGAGGGTAAGGAGGGAAGCAGGGTTGTCATTGCAACAAGCGACAT 1043
Query 1044 GTCCTT-ACTAAAGGGTCTGGTTCAGGATACTTACGTTGTCCGGCAA-TTGAACCACCA- 1100
|||||| || ||| ||| ||||| | ||||||||| | || | || |||||||| ||
Sbjct 1044 GTCCTTAAC-AAATGGTTTGGTTGATGATACTTACATGGTTC-AAAATTTGAACCA-CAG 1100
Query 1101 AGACGGCATGGATCTTTTTCACTATCATGCCTTTAATAG-TAAT-AGAGCCACTCCTCCC 1158
||| || | | || |||||||||||||||||| || | | || | ||||| |||||
Sbjct 1101 AGATAGCTTACAACTATTTCACTATCATGCCTTT-ATTGATGATCA-AGCCAATCCTCAA 1158
Query 1159 AAGGGAGATTTCAACAAGATGTCAGAA-GATTTCGTTCATTATGCAAAAGGCCATCCACT 1217
||| |||||||| ||| |||||||| | ||| || ||||| || | ||||||||||||
Sbjct 1159 AAGAAAGATTTCATGAAGCTGTCAGAAGGGTTT-GTACATTACGCCAGAGGCCATCCACT 1217
Query 1218 AGCTCTCAAAATATTGGGAATAGAACTTTGT-GGGAAAGAAAGGACCACGTGGGAA---G 1273
||| |||||| ||||||| ||| ||| | | |||| | ||| || | |||| |
Sbjct 1218 AGCCCTCAAAGTATTGGGTGGAGAGCTTAATAAGAAAAGTATGGATCA--TTGGAATTCG 1275
Query 1274 AAAAACTGAAGTTACTCGCTA-AAAGTCCCAGCCCTTATATTGGAAGTGTCTTGCAAGTA 1332
|||| ||||| ||| || | | || ||||||||| |||||| |||||||| |||||
Sbjct 1276 -AAAA-TGAAGAAACTTGC-ACAGAGCCCCAGCCCTAATATTGTCAGTGTCTTCCAAGTG 1332
Query 1333 AGTTATGAAGAATTGAGTCCAGGGCAAAAAGACGCCTTTCTCGACATAGCCTGTTTCAGA 1392
|||||||| ||||||| | ||| ||| ||||| || ||||||||||||||||||||||||
Sbjct 1333 AGTTATGATGAATTGACTACAGCGCAGAAAGATGCATTTCTCGACATAGCCTGTTTCAGA 1392
Query 1393 TCGGAGGATGTGGATTATGTAGAAAGTTTACTGGCTTCATCTGACCTTGGATCTGCTGAA 1452
|| |||| |||||||||||||||| |||||||||||||||||||||| || ||||||
Sbjct 1393 TCACAGGACAAGGATTATGTAGAAAGTCTACTGGCTTCATCTGACCTTGGTTCGGCTGAA 1452
Query 1453 GCAATGAATGCAGTAAAAGCTCTCGCAGATAAGTGCCTGATTAATACTTGTGACGGCCGA 1512
||||||| |||||| ||| ||||| | ||||||| |||||||||||||||||| ||||||
Sbjct 1453 GCAATGAGTGCAGTCAAATCTCTCACGGATAAGTTCCTGATTAATACTTGTGATGGCCGA 1512
Query 1513 GTGGAAATGCATGATCTACTCTATACATTTGCCAGGGAACTTGATTCT-AAAGCATC--- 1568
||||| |||||||||||| | |||| |||| | |||||| |||| ||| || |||||
Sbjct 1513 GTGGAGATGCATGATCTATTATATAAATTTTCAAGGGAAGTTGA-TCTGAAGGCATCTAA 1571
Query 1569 -CA--CTTGTAGCAGAGAACGGAGGCTGTGGCACCATAAAGAGC-TTATCAGGGGAGGCG 1624
|| | |||||||| ||||||||||||||| |||| || | | | |||| |||||||
Sbjct 1572 TCAGGATGGTAGCAGACAACGGAGGCTGTGGCTCCATCAACA-CATAATCAAGGGAGGC- 1629
Query 1625 AT-GTTGATGTACTGCAAAATAAGATGAGAGCTGCCAATGTCAGAGGTATTTTCCTAGAT 1683
|| | ||||| |||||||||| |||| |||||||||||| |||||||||||||||||
Sbjct 1630 ATAATCAATGTATTGCAAAATAAAATGAAAGCTGCCAATGTTAGAGGTATTTTCCTAGAC 1689
Query 1684 TTGTCTGAAGTCAAAGGCGAAACAAGCTTAGACAAAGATCACTTCA-AATGTATGACTAA 1742
||||||||||| ||| |||||| ||||||||| || ||||||| || |||| ||
Sbjct 1690 TTGTCTGAAGTGGAAGACGAAACGAGCTTAGACCGCGACCACTTCATAA-ATATG-GGAA 1747
Query 1743 A-CTTCGGTATCTCAAGTTCTACAATTCTCATTGTCCACACAAATGTAAAACCAATAATA 1801
| || ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||
Sbjct 1748 ATCTCCGGTATCTCAAGTTCTACAATTCCCATTGTCCACAGGAATGTAAAACCAACAATA 1807
Query 1802 AAATAAACATCCTTGATGGACTTATGCTGA-CATTGAAAGAGGTCCGATGCCTCCACTGG 1860
|||| ||||||| |||| ||||| ||| | |||||||||| || |||||||||||||||
Sbjct 1808 AAATCAACATCCCTGATAAACTTAAGCT-ACCATTGAAAGAAGTTCGATGCCTCCACTGG 1866
Query 1861 CTAAAATTCCCATTGGAGAAACTTCCAAACGATTTCTATCCAAATAATCTCGTCGACCTT 1920
|| |||||||||||||||| |||||||||||||||| | |||| |||||| |||||||||
Sbjct 1867 CTGAAATTCCCATTGGAGACACTTCCAAACGATTTCAACCCAATTAATCTTGTCGACCTT 1926
Query 1921 AAGCTGCCCTACAGTGAGATTGAACAACTTTGGGAGGGTGACAAGGATATACCAGT-CTT 1979
||||||||||||||||| || |||||||||||||||||||||||||| | |||| | |||
Sbjct 1927 AAGCTGCCCTACAGTGAAATGGAACAACTTTGGGAGGGTGACAAGGACACACCA-TGCTT 1985
Query 1980 AAAATGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGATTATCAAAGGC 2039
|| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1986 AAGGTGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGGTTATCAAAAGC 2045
Query 2040 TCAAAATCTTCAA-GTGTTAAATCTTGAAGGTTGCACAA 2077
| |||| |||||| | ||| || ||||||||||||||||
Sbjct 2046 TGAAAAGCTTCAAAG-GTTGAACCTTGAAGGTTGCACAA 2083
Score = 985 bits (533), Expect = 0.0
Identities = 1084/1340 (81%), Gaps = 77/1340 (6%)
Strand=Plus/Plus
Query 2059 AATCTTGAA-GGTTGCACAAGTCTCAAATCTCTTGGAGATG-TGAATTCGAAATCTCTTA 2116
|||| |||| || || ||||||||| |||||||| ||| | |||||| || ||||| |
Sbjct 2137 AATC-TGAAGGGGTGTACAAGTCTCGAATCTCTTCCAGA-GATGAATTTGATTTCTCTGA 2194
Query 2117 AAACTCTCACCCTCAGCGGCTGCTCAAAC-TTCAAGGAATTTCCTTTAATTCCAGAAAAT 2175
|||| || || |||||||||||||| ||| || ||||||||||| || ||| |||| |||
Sbjct 2195 AAACACTTACTCTCAGCGGCTGCTC-AACTTTTAAGGAATTTCCGTTGATTTCAGATAAT 2253
Query 2176 CTAGAAGCTTTATACTTGGACGGAACAGCAATAAGTCAACTTCCTGAT-AACTTGGTGAA 2234
||||| || ||||||| || || |||||||||||||| |||||| || ||| ||| |||
Sbjct 2254 ATAGAAACTCTATACTTAGATGGCACAGCAATAAGTCAGCTTCCT-ATGAACATGGAGAA 2312
Query 2235 CCTCCAGAGACTTG-TCTCATTGAATATGAAAGACTGTCAAAA-GCT-GAAGAATATCCC 2291
|| |||||||||| | | |||||||||||||||||| ||||| ||| || ||| || ||
Sbjct 2313 GCTTCAGAGACTTGTTGT-ATTGAATATGAAAGACTG-CAAAATGCTAGAGGAA-ATTCC 2369
Query 2292 A-ACCTTTGTCGGTGAGCTGAAATCTCTTCAAAAACTGGTACTCTCTGGTTGTTTAAAGC 2350
| || ||| |||||||||||| |||||||| ||||| ||||||||| ||||||||| |
Sbjct 2370 AGGCC-GTGTTGGTGAGCTGAAAGCTCTTCAAGAACTGATACTCTCTGATTGTTTAAATC 2428
Query 2351 TCAAGGAATTTT--CAGAAATCAACAAGAGCTCTTTAAA-ATTTTTACTTCTGGATGGGA 2407
|||| | ||||| |||||||| ||| |||| |||||| | |||||||| |||||||||
Sbjct 2429 TCAA-G-ATTTTCCCAGAAATCGACATTAGCTTTTTAAACA-TTTTACTTTTGGATGGGA 2485
Query 2408 C-GTCCATCAAAACCATGCCACAGTTACCCTCAGTGCAGTATTTATGCTTAAGCAGAAAT 2466
| | |||| || |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 2486 CAG-CCATTGAAGTGATGCCACAATTACCCTCAGTGCAGTATTTGTGCTTAAGCAGAAAT 2544
Query 2467 GATAATCTCAGCTACCTTCCAGCTGGCATCAATCAACTTTCTCAA-TTAACACGGCTGGA 2525
| ||| |||||| |||||| | ||| |||| ||| ||||||||| |||| | |||||||
Sbjct 2545 GCTAAGATCAGCTGCCTTCCTGTTGGAATCAGTCAGCTTTCTCAACTTAA-ATGGCTGGA 2603
Query 2526 TTTGAAGTATTGTAAGAAG-CTTACATCTA-TTCCAGAGTTGCCACCAAATCTTCAGTAC 2583
|||||||||||| | || |||||||| | |||||||||| |||||||||||||||| |
Sbjct 2604 CCTGAAGTATTGTACG-AGTCTTACATC-AGTTCCAGAGTTTCCACCAAATCTTCAGTGC 2661
Query 2584 TTAGATGCACACGGCTGTAGCTCACTGAATACTGTCGCAAAACCGCTCGCCCGTATCATG 2643
|||||||||||||||||||| || ||||| || || |||| || | ||||||||||||
Sbjct 2662 TTAGATGCACACGGCTGTAGTTCGCTGAAGACAGTTTCAAAGCCTTTGGCCCGTATCATG 2721
Query 2644 CCGACCGTGCAGAACCGTTGCACTTTCAATTTCACCAACTGTGATAACCTGGAGCAAGCT 2703
|| || | ||||| | || ||| |||| ||||||||||||||| |||||||| ||||||
Sbjct 2722 CCAACTGAACAGAATCATTCCACATTCATTTTCACCAACTGTGAGAACCTGGAACAAGCT 2781
Query 2704 GCAATGGATGAAATCACATCGTTTGCTCAAAGTAAATGCCAG-TTTCTATCAGATGCTCG 2762
|||| ||| ||||||||||||| ||||||||| ||||||||| | | ||||| |||||||
Sbjct 2782 GCAAAGGAGGAAATCACATCGTATGCTCAAAGGAAATGCCAGCTGT-TATCATATGCTCG 2840
Query 2763 TAAACACTACAATGAGGGTTTTAG-TTCAGAGGCTTTGTTCACCACTTGCTTTCCTGGAT 2821
|||| |||||||| |||| || | |||||| ||||||||| |||||||||||||||||
Sbjct 2841 GAAACGCTACAATGGGGGTCTT-GTTTCAGAATCTTTGTTCAGCACTTGCTTTCCTGGAT 2899
Query 2822 GTGAGGTGCCTTCGTGGTTTTCTCATGAAGAAAG-AGGATCTCTGAT-GCAACG-AAAAC 2878
|||| |||||||| ||||||| ||||||| | || |||||| | | | || | |||||
Sbjct 2900 GTGAAGTGCCTTCTTGGTTTTGTCATGAA-ACAGTTGGATCTGAGTTAG-AA-GTAAAAC 2956
Query 2879 TCCTCCCACATTGGCATGACAAGA-GCCTTTCTGGGATAGCTCTATGTGCTGTAGTCTCA 2937
|||||||||||||||||||||||| || || | ||||| |||||||||||||||||||||
Sbjct 2957 TCCTCCCACATTGGCATGACAAGAAGC-TTGCCGGGATTGCTCTATGTGCTGTAGTCTCA 3015
Query 2938 TTTCCTG-CTGGCCAA-ACTCAAATCAGCAGCTTCTCGGTGGCATGCACCTTTAC-GATA 2994
| || || | |||| | |||| ||||| |||| || ||| | |||||||||| | ||
Sbjct 3016 TGTCTTGACCC-CCAAGA-TCAAGTCAGCCGCTTGTCAGTGACCTGCACCTTTAAAG-TA 3072
Query 2995 AAAGTTCAAGAAAAGTCTTGGATCCCCTTTACTTG-CCAGGTAGGAAGTTGGG--AG--- 3048
|||| | |||| ||||||||| || | | |||||| |||| ||||||||||| ||
Sbjct 3073 AAAGATGAAGACAAGTCTTGGGTCGCATATACTTGTCCAG-TAGGAAGTTGGACCAGACA 3131
Query 3049 -GGAGACAAGGAA-GACAAGATTGAG-TCAGATCATGTTTTTATAGCCTACATTACTTGC 3105
|||| | |||| || ||||||||| | ||| ||||| || || | |||| | ||||
Sbjct 3132 TGGAGGCG-GGAAAGATAAGATTGAGCT-AGACCATGTCTTCATTGGATACACCAGTTGC 3189
Query 3106 CCACATACGATAAGGTGTC-TCGAAGATGAG-AACTCTGATAAATGCAATTTTACTGAAG 3163
|||||||| |||| |||| | ||||| | | ||||| ||| |||||||| ||| ||||
Sbjct 3190 CCACATACTATAAAATGTCAT-GAAGAAG-GTAACTCAGATGAATGCAATCCTACCGAAG 3247
Query 3164 CCTCTCTTGAGTTTAATGTGACTGGTGGTACAAGTGAGA-TAGGAAAATTCACGGTGTTG 3222
|||||||| | |||| |||||| || ||||||||||||| | ||||||| || |||||||
Sbjct 3248 CCTCTCTTAAATTTACTGTGACAGGAGGTACAAGTGAGAAT-GGAAAATACAAGGTGTTG 3306
Query 3223 AGGTGCGGCTTAAGTTTGGTTTATGCAAAAGATAACA-ACAGAAACAGTTCTCATGAAGC 3281
| ||| || ||||||||||| ||||| || ||||| | ||| ||| ||| ||| |||| |
Sbjct 3307 AAGTGTGGTTTAAGTTTGGTGTATGCTAAGGATAA-AGACAAAAATAGTGCTCTTGAAAC 3365
Query 3282 AAAGTATGATATGCCTGTTG-AA-GTAAACTTTCAAGAACCT-CA-ACATGGGATGAAGG 3337
|||||| ||||||| | ||| || | | |||||||||| || || | | ||| ||| ||
Sbjct 3366 AAAGTACGATATGCTTATTGGAAAG-AG-CTTTCAAGAAACTTCAGA-AGGGGTTGATGG 3422
Query 3338 A-GGagaaaagaaaactaaa 3356
| || | ||||||||| |||
Sbjct 3423 AAGG-GTAAAGAAAACGAAA 3441
> AT4G19530.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class) family | chr4:10651744-10657282 FORWARD LENGTH=3914
Length=3914
Score = 178 bits (96), Expect = 3e-43
Identities = 273/353 (77%), Gaps = 33/353 (9%)
Strand=Plus/Plus
Query 1741 AAA-CTTCGGTATCTCAAGTTCTACAATTCTCATTGTCCACACAAATGTAAAACC-AA-T 1797
||| || ||||| |||||||| |||| |||||||||||| || ||||| | || ||
Sbjct 1979 AAATCTCCGGTACCTCAAGTTTTACAGTTCTCATTGTCCTCAGGAATGT-ACGCCTAAGG 2037
Query 1798 AATAAAATAAACAT-CCTTGATGGACTT-ATGCTGACA-TTGAAAGAGGTCCGATGCCTC 1854
|| || ||| |||| ||| || | |||| | ||| || ||| ||||||||||||| |
Sbjct 2038 AA-AACATACACATCCCTGGA-GAACTTGA-GCTTCCACTTG-AAGAGGTCCGATGTTTG 2093
Query 1855 CACTGGCTAAAATT-CCCATTGGA-GAAACTTCCA-AACGATTTCTAT-CCAAATAATCT 1910
|| |||||||| || |||| || | |||||||| || |||||| || || || |||||
Sbjct 2094 CATTGGCTAAATTTCCCCA-AAGATG-AACTTCCACAA-GATTTC-ATCCCCAAGAATCT 2149
Query 1911 CGTCGACCTTAAGCTGCCC-TACAGTGAGATTGA-ACA-ACTTTGGGAG-GGTGACAAGG 1966
||| || |||||||| ||| |||||| ||||| | ||| | ||| |||| | || ||||
Sbjct 2150 CGTAGATCTTAAGCT-CCCTTACAGTAAGATT-AGACAGA-TTT-GGAGAGAAGAGAAGG 2205
Query 1967 ATATACC-AGTCTTAAAATGGGTCGATCTCAATCACTCAAGTAAGTTGTGCAG-CTTGTC 2024
|| ||| | | ||| |||||||||||||||||||||||||||||| | | ||||||
Sbjct 2206 ATGCACCAAAAC-TAAGGTGGGTCGATCTCAATCACTCAAGTAAGTTG-GAAAACTTGTC 2263
Query 2025 AGGATTATCAAAGGCTCAAAATCTTCAA-GTGTTAAATCTTGAAGGTTGCACA 2076
||| ||||| |||||| ||||||| || | || || |||||||||||||||
Sbjct 2264 AGGGCTATCACAGGCTCTAAATCTTGAAAGA-TTGAACCTTGAAGGTTGCACA 2315
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 173527455837
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5