BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg915598 Length=3414 Score E Sequences producing significant alignments: (Bits) Value AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-N... 2649 0.0 AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 813 0.0 AT2G17060.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 150 7e-35 > AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-NBS-LRR class) family | chr5:18321914-18326022 REVERSE LENGTH=3654 Length=3654 Score = 2649 bits (1434), Expect = 0.0 Identities = 2446/2903 (84%), Gaps = 195/2903 (7%) Strand=Plus/Plus Query 536 GAAACGAACGACGCCTAGAGGAATTGGAAGAGAAGCTGGAT--T-TTGAAGACGATAGTC 592 ||||||||| ||| || | || |||||||||||| ||||| | | || || | || Sbjct 626 GAAACGAACAACGGTTAAAAGATTTGGAAGAGAAGTTGGATCGTGATAAATAC-A-AG-G 682 Query 593 GAACTCGTATCATTGGAGTTTTTGGGATGCCTGGAATTGGTAAAACCACACTCTTAAAAG 652 |||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||| Sbjct 683 GAACTCGTATCATTGGAGTTGTTGGGATGCCCGGAATTGGTAAAACCACACTCCTGAAAG 742 Query 653 AGCTCTTTAAGAAGTGG-AAGCCTAAGTTCATT--AGGCATTCGTTAGTTGATCAAATCC 709 |||| | ||||| |||| | | | ||||| || |||||| || || | |||||||||| Sbjct 743 AGCTATATAAGACGTGGCAGGGC-AAGTT--TTCGAGGCATGCGCTAATCGATCAAATCC 799 Query 710 GTCG-AAAGTCAGAAG-AC-TCCAG-T-GTTTGTTTACCCACAACT-CTCTTAGGAGAGT 763 || | |||||| ||| || | || | | | | || || ||| | |||||||| |||| Sbjct 800 GT-GTAAAGTC-CAAGCACTTGGAGTTGGATCGCTT-GCCTCAAATGCTCTTAGGCGAGT 856 Query 764 TGCTGACGTCGTTGGCA-GATCC-C-CGGATTGACAATGAT-GAAGACCCATACAACATG 819 || | | ||| | |||| | | | | |||||| | |||| |||| ||| | Sbjct 857 TG-T--CCAAGTT-AAACCATCCTCAC-G-TAGACAAT-CTCAAAGATCCAT---ACA-G 905 Query 820 TACAAGGATGAGCTGC-TCAAACGCAAAGTTCTTGTCATTCTTGACGATGTTAGTACAAG 878 | | | | |||| | |||||||||| ||||| | ||||| |||||||||| ||| Sbjct 906 T-C----A--A-CTGCAT-GAACGCAAAGTGCTTGTTGTACTTGATGATGTTAGTAAAAG 956 Query 879 GGAACAAATAGATGCTCTTC-TCGGGAGACGT-GACTGGATT-A--A--G-AA--A-GGA 927 |||||||||||||||||||| | | || || | ||||||||| | | | || | ||| Sbjct 957 GGAACAAATAGATGCTCTTCGT-GAGATAC-TAGACTGGATTAAGGAGGGTAAGGAGGGA 1014 Query 928 AGCAAGATTGTCATTGCAACAAGTGACATGTCATTAACAAATGGCCTGGTTGATGATACT 987 |||| | |||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct 1015 AGCAGGGTTGTCATTGCAACAAGCGACATGTCCTTAACAAATGGTTTGGTTGATGATACT 1074 Query 988 TACATGGTCCAAAAATTGAACCACAGAGACAGCTTACAAGTTTTTCACTATCATG-C-TT 1045 |||||||| ||||| |||||||||||||| ||||||||| | ||||||||||||| | || Sbjct 1075 TACATGGTTCAAAATTTGAACCACAGAGATAGCTTACAACTATTTCACTATCATGCCTTT 1134 Query 1046 -CTGTTGAT--A---AAT-C-C--AAGGATGATTTCATGAAGCTGTCGGAAGAGTTTGTA 1095 || |||| | ||| | | ||| | ||||||||||||||||| |||| ||||||| Sbjct 1135 ATTGATGATCAAGCCAATCCTCAAAAGAAAGATTTCATGAAGCTGTCAGAAGGGTTTGTA 1194 Query 1096 CATTACTCCAGAGGCCACT-CACTAGCTCTCAAAGTATTGGGTGGAGATCTTAAGAAGCA 1154 |||||| |||||||||| | ||||||| |||||||||||||||||||| ||||| ||| | Sbjct 1195 CATTACGCCAGAGGCCA-TCCACTAGCCCTCAAAGTATTGGGTGGAGAGCTTAATAAG-A 1252 Query 1155 AAA-TATAGATTATTGGAA-T-GACAAACTGAAGACACTCACACAAAGTCCCATCCC--- 1208 ||| ||| ||| ||||||| | || ||| |||||| ||| |||| || |||| ||| Sbjct 1253 AAAGTATGGATCATTGGAATTCGA-AAA-TGAAGAAACTTGCACAGAGCCCCAGCCCTAA 1310 Query 1209 --TCGAC-GCGTCTTCAAAGTAAGTTATGATGAATTGAGTTCAGAGCAAAAAGATGCATT 1265 | | | | |||||| |||| |||||||||||||||| | ||| ||| ||||||||||| Sbjct 1311 TATTGTCAGTGTCTTCCAAGTGAGTTATGATGAATTGACTACAGCGCAGAAAGATGCATT 1370 Query 1266 TCTAGACATAGCCTGCTTCAGATCGCATGATGTA-GAATATATAGAAAGTCTATTGGCTT 1324 ||| ||||||||||| |||||||| || || | || ||| ||||||||||| |||||| Sbjct 1371 TCTCGACATAGCCTGTTTCAGATCACAGGA-CAAGGATTATGTAGAAAGTCTACTGGCTT 1429 Query 1325 CATCT-A--------CGG--G-AGCAGT-A--GAAG-C---CCTTTC-C-GATATGTGCC 1363 ||||| | ||| | |||| | | | || | || || | |||| || || Sbjct 1430 CATCTGACCTTGGTTCGGCTGAAGCAATGAGTGCAGTCAAATCTCTCACGGATAAGTTCC 1489 Query 1364 TGATTAATACTTGTGACGGTCGAGTGGAGATGCATGATCT-TCTGTAT-ACTTTGTCAAG 1421 |||||||||||||||| || |||||||||||||||||||| | | ||| | ||| ||||| Sbjct 1490 TGATTAATACTTGTGATGGCCGAGTGGAGATGCATGATCTAT-TATATAAATTT-TCAAG 1547 Query 1422 GGAACTTGATCCT-AAAGCATCCACTCAAATTGG-TGGTAGCAAACAACGGAGGCTGTGG 1479 |||| ||||| || || ||||| | || | || |||||||| |||||||||||||||| Sbjct 1548 GGAAGTTGAT-CTGAAGGCATCTAATC--A--GGATGGTAGCAGACAACGGAGGCTGTGG 1602 Query 1480 CTCCATCAAGACATTATCAAGGAAGGCACAATTAATGT-TCTG-AAGAATAAACTGGTGA 1537 ||||||||| |||| ||||||| ||||| ||| ||||| | || || |||||| ||| Sbjct 1603 CTCCATCAACACATAATCAAGGGAGGCATAATCAATGTAT-TGCAA-AATAAA---ATGA 1657 Query 1538 GACCTAAGGATGTGAGAGGAATTTTCCTAGACTTGTCTGAAGTGGAAGGCGAAA-TATGC 1596 | || |||| ||||| |||||||||||||||||||||||||||| ||||| | || Sbjct 1658 AAGCTGCCAATGTTAGAGGTATTTTCCTAGACTTGTCTGAAGTGGAAGACGAAACGA-GC 1716 Query 1597 TTAGATTGCGACCACTTCGA-AGATATGTGTAATCTTCGGTACCTCAAGTTCTACAATTC 1655 ||||| ||||||||||| | | ||||| | ||||| ||||| ||||||||||||||||| Sbjct 1717 TTAGACCGCGACCACTTC-ATAAATATGGGAAATCTCCGGTATCTCAAGTTCTACAATTC 1775 Query 1656 TCATTGTCCCCAGGAATGTAAAACTACCAATAAGATAAACACCCCTGA-AGGAGTTAAGT 1714 |||||||| |||||||||||||| | |||||| || |||| |||||| | | ||||| Sbjct 1776 CCATTGTCCACAGGAATGTAAAACCAACAATAAAATCAACATCCCTGATA-AACTTAAGC 1834 Query 1715 TACCATTGAAA-AAGGTTCGATGCCTCCACTGGCTAG-AATTCCCGTTGGAAGA-ATTTC 1771 ||||||||||| || |||||||||||||||||||| | ||||||| |||| ||| | ||| Sbjct 1835 TACCATTGAAAGAA-GTTCGATGCCTCCACTGGCT-GAAATTCCCATTGG-AGACACTTC 1891 Query 1772 CAAACGATTTTGACCCGATTAATCTCGTTGACCTTAAGCTG-CCTCGCAG-CAAGATTAA 1829 |||||||||| |||| |||||||| || |||||||||||| ||| ||| || || | Sbjct 1892 CAAACGATTTCAACCCAATTAATCTTGTCGACCTTAAGCTGCCCT-ACAGTGAA-ATGGA 1949 Query 1830 ACAACTCTGGGAGGGTGACAAGGATACACCATTCTTAAAGTGGGTCGATCTCCAGCACTC 1889 |||||| ||||||||||||||||| ||||||| ||||| ||||||||||||| | ||||| Sbjct 1950 ACAACTTTGGGAGGGTGACAAGGACACACCATGCTTAAGGTGGGTCGATCTCAATCACTC 2009 Query 1890 AAGTAAGTTGTGCAGCTTGTCAGGGTTATTAAAGGCTGAAAAGCTTCAAAGATTGAACCT 1949 ||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| Sbjct 2010 AAGTAAGTTGTGCAGCTTGTCAGGGTTATCAAAAGCTGAAAAGCTTCAAAGGTTGAACCT 2069 Query 1950 TGAAGGTTGCACAACACTGAAAACGTTGCCACATGATATGCACAAAATGAAAGTGCTTAG 2009 |||||||||||||||||||||| |||| |||||||||||| | ||||||||| ||||| | Sbjct 2070 TGAAGGTTGCACAACACTGAAAGCGTTTCCACATGATATGAAAAAAATGAAAATGCTT-G 2128 Query 2010 -TTTCCTGAATCTGAAAGGGTGCACAAGTCTCGAATTTCTTCCAGAGATGAATTTGGTTT 2068 |||| |||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct 2129 CTTTCTTGAATCTGAAGGGGTGTACAAGTCTCGAATCTCTTCCAGAGATGAATTTGATTT 2188 Query 2069 CTCTGAAAACACTTACTCTCAGCGGCTGCTCAAGTTTTAAAGATTTTCCGTTGATTTCAG 2128 ||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||| Sbjct 2189 CTCTGAAAACACTTACTCTCAGCGGCTGCTCAACTTTTAAGGAATTTCCGTTGATTTCAG 2248 Query 2129 ATAATATAGAAACACTATACTTAGATGGCACAGAAATAAGTCAGCTTCCTACGAACATGG 2188 ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 2249 ATAATATAGAAACTCTATACTTAGATGGCACAGCAATAAGTCAGCTTCCTATGAACATGG 2308 Query 2189 AGAAGCTCCAGAGCCTTGTGGTATTGAATATGAAAGACTGCAAAATGCTGGAGGAAATCC 2248 ||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct 2309 AGAAGCTTCAGAGACTTGTTGTATTGAATATGAAAGACTGCAAAATGCTAGAGGAAATTC 2368 Query 2249 CAGGTCGTGTTAATGAGCTGAAAGCTCTTCAAGAACTGATACTCTCTGATTGTTTCAACC 2308 |||| |||||| |||||||||||||||||||||||||||||||||||||||||| || | Sbjct 2369 CAGGCCGTGTTGGTGAGCTGAAAGCTCTTCAAGAACTGATACTCTCTGATTGTTTAAATC 2428 Query 2309 TAAAGAATTTCCCTGAAATCAACATGAGCTCTTTAAACATTTTACTTTTGGATGGGACAG 2368 | |||| |||||| |||||| |||| |||| ||||||||||||||||||||||||||||| Sbjct 2429 TCAAGATTTTCCCAGAAATCGACATTAGCTTTTTAAACATTTTACTTTTGGATGGGACAG 2488 Query 2369 CCGTAGAAGTGATGCCACAATTACCCTCAGTGCAGTATTTGAGCTTAAGCAGAAATACGA 2428 || | |||||||||||||||||||||||||||||||||||| |||||||||||||| | | Sbjct 2489 CCATTGAAGTGATGCCACAATTACCCTCAGTGCAGTATTTGTGCTTAAGCAGAAATGCTA 2548 Query 2429 AGATCAGCTGCCTTCCTATTGGAATCAGTCACCTTTCTCAACTAAAATGGCTGAACCTGA 2488 ||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||| Sbjct 2549 AGATCAGCTGCCTTCCTGTTGGAATCAGTCAGCTTTCTCAACTTAAATGGCTGGACCTGA 2608 Query 2489 AGTATTGTACGAAG-CTTACATCTGTTCCAGAGTTTCCACCAAATCTTCAGTGCTTAGAT 2547 ||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2609 AGTATTGTACG-AGTCTTACATCAGTTCCAGAGTTTCCACCAAATCTTCAGTGCTTAGAT 2667 Query 2548 GCACACGGCTGTAGTTTGCTGAAGACAGTTTCAAAGCCTTTGGCCCGTATCATGCCAACC 2607 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2668 GCACACGGCTGTAGTTCGCTGAAGACAGTTTCAAAGCCTTTGGCCCGTATCATGCCAACT 2727 Query 2608 GAACAGAATCATTCCACATTCATTTTCACCAACTGTCAGAACCTGGAACAAGCTGCAAAG 2667 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2728 GAACAGAATCATTCCACATTCATTTTCACCAACTGTGAGAACCTGGAACAAGCTGCAAAG 2787 Query 2668 GAGGAAATCACATCGTATGCTCAAAGGAAATGCCAGCTGTTATCATATGTTCGTAAACGC 2727 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 2788 GAGGAAATCACATCGTATGCTCAAAGGAAATGCCAGCTGTTATCATATGCTCGGAAACGC 2847 Query 2728 TACAATGGGGGTCTTGTTTCAGAGTCTTTGTTCAGCACTTGCTTTCCTGGATGTGAAGTG 2787 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2848 TACAATGGGGGTCTTGTTTCAGAATCTTTGTTCAGCACTTGCTTTCCTGGATGTGAAGTG 2907 Query 2788 CCTTCTTGGTTTTGTCATGAAACAGTTGGATCTGAGTTAGAAGTAAAACTCCTCCCACAT 2847 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2908 CCTTCTTGGTTTTGTCATGAAACAGTTGGATCTGAGTTAGAAGTAAAACTCCTCCCACAT 2967 Query 2848 TGGCATGACAAGAAGCTTGCCGGGATTGCTCTATGTGCTGTAGTCTCATGTCTTGACCGC 2907 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2968 TGGCATGACAAGAAGCTTGCCGGGATTGCTCTATGTGCTGTAGTCTCATGTCTTGACCCC 3027 Query 2908 CAAGATCAAATCAGTCGATTTTCAGTGACATGCACCTTTAAGGT------TGAAGACAAG 2961 ||||||||| |||| || || |||||||| ||||||||||| || |||||||||| Sbjct 3028 CAAGATCAAGTCAGCCGCTTGTCAGTGACCTGCACCTTTAAAGTAAAAGATGAAGACAAG 3087 Query 2962 TCTTGGATCCCATTTACTTTTCCAGTAGGAAGTTGGACCAGACATGAAGACGGAAAAGTG 3021 |||||| || ||| ||||| |||||||||||||||||||||||||| || || Sbjct 3088 TCTTGGGTCGCATATACTTGTCCAGTAGGAAGTTGGACCAGACATG--GA-GG------- 3137 Query 3022 ACCAGACATGAAGACGAAAAAGACAAGATTGAG-TCAGACCATGTGTTTATTGGTTACAC 3080 | | | || || || ||||||||| | ||||||||| || ||||| ||||| Sbjct 3138 -C--G----G--GA--AA---GATAAGATTGAGCT-AGACCATGTCTTCATTGGATACAC 3182 Query 3081 CAGTTACCCACATACTATAAAGTGTCCTGAAGACGGTAACTCGGATAAATGCAATTCTAC 3140 ||||| ||||||||||||||| |||| |||||| |||||||| ||| |||||||| |||| Sbjct 3183 CAGTTGCCCACATACTATAAAATGTCATGAAGAAGGTAACTCAGATGAATGCAATCCTAC 3242 Query 3141 CCAAGCCTCCCTTAATTTTACTATCACAGGTGCG-A-A--TGAAAA-GCT---TA-A-GG 3190 | ||||||| ||||| |||||| | ||||| | | | | ||| || | || | || Sbjct 3243 CGAAGCCTCTCTTAAATTTACTGTGACAGGAG-GTACAAGTGAGAATGGAAAATACAAGG 3301 Query 3191 TGTTGCAGTGTGGTTTCAGTCTGGTGTATGC-AAGGGATAA-GTACAAAAACAGTTCTCA 3248 ||||| |||||||||| ||| |||||||||| |||| |||| | ||||||| ||| ||| Sbjct 3302 TGTTGAAGTGTGGTTTAAGTTTGGTGTATGCTAAGG-ATAAAG-ACAAAAATAGTGCTCT 3359 Query 3249 TGAAGGAAAGTACGATATGCC-AGTTGAAAAGAACTTTCAAGAAACTACAGAAGGGGTTT 3307 |||| |||||||||||||| | ||| ||||| ||||||||||||| ||||||||||| Sbjct 3360 TGAAACAAAGTACGATATGCTTA-TTGGAAAGAGCTTTCAAGAAACTTCAGAAGGGGTTG 3418 Query 3308 ATGGAAGAGTaaagaaaaagaaa 3330 ||||||| |||||||||| |||| Sbjct 3419 ATGGAAGGGTAAAGAAAACGAAA 3441 Score = 217 bits (117), Expect = 7e-55 Identities = 131/138 (95%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 3251 AAGGAAAGTACGATATGCCAGTTGAAAAGAACTTTCAAGAAACTACAGAAGGGGTTTATG 3310 |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 3440 AAGGAAAGTACGTTATGCCTGTTGAAAAGAACTTTCAAGAAACTACAGAAGGGGTTGATG 3499 Query 3311 GAAGAGTaaagaaaaagaaaaaaaCAAGAAGGGATAATGGACGGCCAAAAAAGAAGCAAA 3370 |||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct 3500 GAAGAGTAAATAAAAAGAAAAAAACAAGAATGGATAATGGACGGCCAAAGAAGAAGCAGA 3559 Query 3371 GATCAGGAAGAGATGATA 3388 |||||||||||||||||| Sbjct 3560 GATCAGGAAGAGATGATA 3577 > AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:18182038-18186495 FORWARD LENGTH=3926 Length=3926 Score = 813 bits (440), Expect = 0.0 Identities = 1111/1420 (78%), Gaps = 105/1420 (7%) Strand=Plus/Plus Query 2014 CTGAATC-TGAAAGGGTGCACAAGTCTCGAATTTCTTCCAGA-GATGAATTTGGTTTCTC 2071 ||||| | || |||||||||||||||| |||| ||||| ||| | |||||||| ||| Sbjct 2062 CTGAACCTTG-AAGGGTGCACAAGTCTTGAATCTCTTCGAGATG-TGAATTTGACGTCTT 2119 Query 2072 TGAAAACACTTACTCTCAGCGGCTGCTCAAGTTTTAAAGATTTTCCGTTGATTTCAGATA 2131 ||||||| || || |||||| |||||||| || || || ||||| |||||| |||| | Sbjct 2120 TGAAAACTCTCACCCTCAGCAACTGCTCAAACTTCAAGGAATTTCCATTGATTCCAGAAA 2179 Query 2132 ATATAGAAA-CACTATACTTAGATGGCACAGAAATAAGTCAGCTTCCT-ACGAACATGGA 2189 || || ||| | ||||||| || || ||| |||||||| |||||| || ||| ||| Sbjct 2180 ATTTA-AAAGCTTTATACTTGGACGGGACATCGATAAGTCAACTTCCTGAC-AACGTGGG 2237 Query 2190 GAAGCTCCAGAGCCTTGTGGTATTGAATATGAAAGACTGCAAAATGCTGGAGGA-AATCC 2248 ||| ||| | || ||||| ||||||||||||| ||||||||| ||||||| || |||| Sbjct 2238 GAACCTCAAAAGACTTGTCTTATTGAATATGAAGGACTGCAAAGTGCTGGA-GACTATCC 2296 Query 2249 C-AGGTCGTGTTAATGAGCTGAAAGCTCTTCAAGAAC-TGATACTCTCTGATTGTTTC-A 2305 | | | |||||| |||||||||| |||||||| ||| || |||| || | ||| ||| | Sbjct 2297 CTACCT-GTGTTAGTGAGCTGAAAACTCTTCAAAAACTTG-TACTTTCAGGTTG-TTCAA 2353 Query 2306 ACCT-AAAGAATTTCCCTGAAATCAACATGAGCTCTTTAAACATTTTACTTTTGGATGGG 2364 | || || |||||| || |||||||||| |||||||||||| ||||||||| | |||||| Sbjct 2354 AGCTCAAGGAATTT-CCAGAAATCAACAAGAGCTCTTTAAAAATTTTACTTCTAGATGGG 2412 Query 2365 ACAGCCGT-AGAAGTGATGCCACAATTACCCTCAGTGCAGTATTTGA-GCTTAAGCAGAA 2422 ||| || | | || |||||| || ||||||||||| |||||||| | |||||||||||| Sbjct 2413 ACATCCATCA-AAACGATGCCGCAGTTACCCTCAGTACAGTATTT-ATGCTTAAGCAGAA 2470 Query 2423 ATACGA--AGATCAGCTGCCTTCCTA-TTGGAATCAGTCACCTTTCTCAACTAAAATGGC 2479 || || | ||| || |||||| | ||| |||| ||| ||||||| ||| | ||| Sbjct 2471 AT--GATCATCTCATCTACCTTCC-AGCTGGCATCAATCAAGTTTCTCAGTTAACACGGC 2527 Query 2480 TGAACCTGAAGTATTGTACGAAGCTTACATCTGTTCCAGAGTTTCCACCAAATCTTCAGT 2539 || | |||||||||||||||||||||||| |||||||||||| ||||||| ||| |||| Sbjct 2528 TGGATTTGAAGTATTGTACGAAGCTTACATATGTTCCAGAGTTGCCACCAACTCTCCAGT 2587 Query 2540 GCTTAGATGCACACGGCTGTAGTTTGCTGAAGACA-GTTTCAAAGCCTTTGGCCCGTATC 2598 |||||||||||| |||||||| | ||||||| | ||| |||| || ||||||||||| Sbjct 2588 ACTTAGATGCACATGGCTGTAGCTCACTGAAGA-ATGTTGCAAAACCACTGGCCCGTATC 2646 Query 2599 ATGCCAACCGAACAGAATCATTCCACATTCATTTTCACCAACTGTCAG-AACCTGGAACA 2657 ||| |||||| ||||| |||| ||| |||| ||||||||||||| | |||||||| || Sbjct 2647 ATGTCAACCGTGCAGAACCATTACACTTTCAATTTCACCAACTGT-GGTAACCTGGAGCA 2705 Query 2658 AGCTGCAAAGGAGGAAATCACATCGTATGCTCAAAGGAAATGCCAGCTGTTATCATATGT 2717 |||||||||||||||||||||||||||||||||||| ||||| ||| || | ||| ||| Sbjct 2706 AGCTGCAAAGGAGGAAATCACATCGTATGCTCAAAGAAAATGTCAGTTGCTGTCAGATGC 2765 Query 2718 TCGTAAACGCTACAATGGGGGTCTTGTTTCAGAGTCTTTGTTCAGCACTTGCTTTCCTGG 2777 ||||||| |||||||| |||| | ||||| ||||||||||||||||||||||||| Sbjct 2766 ACGTAAACACTACAATGAGGGT-T-----CAGAGGCTTTGTTCAGCACTTGCTTTCCTGG 2819 Query 2778 ATGTGAAGTGCCTTCTTGGTTTTGTCATGAAACAGTTGGATCTGAGTTAG-AA-GTAAAA 2835 |||||| |||||||| |||||| |||||||| | ||||||||| ||| | || | |||| Sbjct 2820 ATGTGAGGTGCCTTCGTGGTTTGGTCATGAAGCGGTTGGATCTCTGTT-GCAAAG-AAAA 2877 Query 2836 CTCCTCCCACATTGGCATGACAAGAAGCTTGCCGGGATTGCTCTATGTGCTGTAGTCTCA 2895 ||||||||||||||||||||||||| |||| | || || ||||||||||||||||||||| Sbjct 2878 CTCCTCCCACATTGGCATGACAAGAGGCTTTCTGGAATAGCTCTATGTGCTGTAGTCTCA 2937 Query 2896 TGTCTTGACCGCCAAGATCAAATCAG-TCGATTTTCAGTGACATGCACCTTTAAGGT--- 2951 | || |||| ||||||||||| |||| | | || || ||||||||||||||||| | Sbjct 2938 TTTCCTGACAGCCAAGATCAACTCAGCT-GCTTCTCGGTGACATGCACCTTTAAAATAAA 2996 Query 2952 ---TGAAGACAAGTCTTGGATCCCATTTACTTTTCCAGTAGGAAGTTGGACCAGACATGA 3008 |||||||||||||||| |||| ||||||| || ||||||| |||||| ||| || Sbjct 2997 AGCTGAAGACAAGTCTTGGGTCCCCTTTACTTGCCCGGTAGGAATTTGGACTAGA---GA 3053 Query 3009 AGACGGAAAAGTGACCAGACATGAAGACGAAAAAGACAAGATTGAGTCAGACCATGTGTT 3068 | ||||| | ||| | | ||| | | ||||||||| || ||||| || Sbjct 3054 -G--GGAAAC---A--AGA-A--A-GAC-A----G----GATTGAGTCGGATCATGT-TT 3091 Query 3069 T-ATTGGTTACACCAGTTA-CCCACATACTATAAAGTGTC-CTGAAGACG--GTAACTCG 3123 | || | |||| ||| | ||||||| | |||| ||||| | ||||| | | ||||| Sbjct 3092 TCATAGCCTACATTAGT-AGCCCACATTCAATAAGGTGTCTC-GAAGA-GAAG-AACTCT 3147 Query 3124 GATAAATGCAATTCTACCCAAGCCTCCCTTAATTTTACTATCACAGGTGCGA-A--TGAA 3180 ||||||||||||| || ||||||||||| | ||||| | ||| ||| | | || Sbjct 3148 GATAAATGCAATTTTAGTGAAGCCTCCCTTGAGTTTACGGTGACAAGTGATACAAGTGGT 3207 Query 3181 A----AGC-TT-AAGGTGTTGCAGTGTGGTTTCAGTCTGGTGTATGCAAGGGATAAGTAC 3234 | || || ||||| ||| ||||||| || ||| ||||||||| || || || || Sbjct 3208 ATTGGAGTATTCAAGGTTTTGAAGTGTGGATTGAGTTTGGTGTATGAAAATGACAAAAAC 3267 Query 3235 AAAAACAGTTCTCATGAAGG-AAAGTACGATATGCCAGTTGAAAAGAACTTTCAAGAAAC 3293 ||||||||||||| ||| || |||||| ||| | || |||||| || |||||||||| | Sbjct 3268 AAAAACAGTTCTCTTGA-GGCAAAGTATGATGTTCCTGTTGAAGTGAGCTTTCAAGAA-C 3325 Query 3294 TACAGAAG--GGGTTTATGGAAGAGTaaagaaaaagaaa-aaaaCAAGAAGGGATAATGG 3350 ||||| ||| | ||||| ||| | ||| | | ||| |||| |||||| ||| || | Sbjct 3326 --CAGAACACGGGATAATGGAGGAGGAGAGATATATAAACAAAAGAAGAAGTGATGATAG 3383 Query 3351 ACGGCCAAAAAAGAAGCA--AAGATCAGGAAGAGATGATA 3388 ||| |||||||||||| | |||| || ||| ||||||| Sbjct 3384 ACGACCAAAAAAGAAG-AGGAAGA-CAAAAAGGGATGATA 3421 Score = 660 bits (357), Expect = 0.0 Identities = 1147/1503 (76%), Gaps = 156/1503 (10%) Strand=Plus/Plus Query 554 AGGAATTGGAAGAGAAGCTGGA--TT-TTGAAGACGATAGTCGAACTCGTATCATTGGAG 610 |||| |||||||||||| |||| || || || || | || |||||||| ||||||||| Sbjct 644 AGGAGTTGGAAGAGAAGTTGGATCTTGTTAAATAC-A-AG-GGAACTCGTGTCATTGGAG 700 Query 611 TTTTTGGGATGCCTGGAATTGGTAAAACCACACTCTTAAAAGAGCTCTTTAAGAAGTGG- 669 || ||||||||||||||||||| ||||||||||| | |||||||||| ||||| ||| Sbjct 701 TTGTTGGGATGCCTGGAATTGGCAAAACCACACTGGTGAAAGAGCTCTATAAGACCTGGC 760 Query 670 AAGCCTAAGTTCATT--AGGCATTCGTTAG-TTGATCAAATCCGTCGAAAGTCAGAA-GA 725 | | | ||||| || ||| || |||| | | |||||||||||| | |||||| || | Sbjct 761 AGGGC-AAGTT--TTCGAGGTATGCGTT-GATCGATCAAATCCGTGGGAAGTCA-AATAA 815 Query 726 CTCCA-G-T-GTTTGTTTACCCACAACT-CTCTTAGGAG-AGTTGCTGA-CGTCGTTGGC 779 || || | | | || || || || | || ||| ||| || | || | || ||| | Sbjct 816 CTTCAGGTTAGAGTGCTTGCCTAC-TTTGCTTTTA-GAGAAGCTACT-ACCGGAGTT-GA 871 Query 780 A-GATCCCCGGA-TTGACAATGA-TGAAGACCCATACAACATGT-ACAAGGAT-GAGCTG 834 | |||| | | | || | | | |||||| |||||||| | | | |||| | | ||| Sbjct 872 ATAATCCTC-AACTAGATAGT-ATTGAAGAACCATACAA-AACTCATAAGGGTCTA-CTG 927 Query 835 C-TCAAACGCAAAGTTCTTGTCATTCTTGACGATGTTAGTACAAGGGAACAAATAGATGC 893 | | ||||||||||||| ||| | ||||| |||||||||| ||||||||||||| |||| Sbjct 928 CGT-GAACGCAAAGTTCTCGTCGTCCTTGATGATGTTAGTAGAAGGGAACAAATATATGC 986 Query 894 TCTTCTCGGG----A-G------AC-G------TGACTGGAT-TAAGAAAGGAAGCAAGA 934 |||||| ||| | | || | ||| ||||| ||| | || |||| || Sbjct 987 TCTTCTTGGGAAATATGATCTTCACAGTAAACATGAGTGGATCAAAG-ATGGCAGCAGGA 1045 Query 935 TTGTCATTGCAAC-AAGTGACATGTCATTAACAAATGGCCTGGTTGATGATACTTACATG 993 | |||||||||| || || || || | | || || || ||| |||| ||||| || Sbjct 1046 TCATCATTGCAACGAA-CGATATCTCCTCATTGAAGGGTCTCGTTCATGACACTTATGTG 1104 Query 994 GTCCAAAAATTGAACCACAGAGACAGCTTACAAGTTTTTCACTATCATG-C-TTC-TGT- 1049 || | |||| |||||||||||| |||||||| |||||| |||||| | | ||| | | Sbjct 1105 GTTCGGCAATTAAACCACAGAGACGGCTTACAACTTTTTCGCTATCACGCCTTTCAT-TA 1163 Query 1050 TGAT-AA---A----TCC-AAGGAT-GATTTCATGAAGCTGTCGGAAGAGTTTGTACATT 1099 |||| || | ||| |||| | |||||||||||||| || || |||||||| |||| Sbjct 1164 TGATCAAGCCACTCCTCCAAAGG-TGGATTTCATGAAGCTTTCTGATGAGTTTGTGCATT 1222 Query 1100 ACT-CCAGAGGCCACT-CACTAGCTCTCAAAGTATTGGGTGGAGATC-TTAAGAAGCAAA 1156 | | | |||||||| | |||||||||||||| |||||||| |||| | ||| | || ||| Sbjct 1223 A-TGCTAGAGGCCA-TCCACTAGCTCTCAAAATATTGGGTAGAGAGCTTTATG-AGAAAA 1279 Query 1157 ATATAG-ATTATT-GGAATGAC-AAACTGA-AGACACTCACACAAAGTCCCATCC-C--- 1208 |||| | | ||| |||| || ||||||| | | ||| | |||||||||| || | Sbjct 1280 ATAT-GAAGCATTGGGAA--ACAAAACTGATA-ATACTTGCTCAAAGTCCCA-CCACTTA 1334 Query 1209 ---TCGACG-CGTC-TTCAAAGTAAGTTATGATGAATTGAGTTCAGAGCAAAAAGATGCA 1263 | || | ||| | | |||||||||||||||||||||||| | ||| ||||||||| Sbjct 1335 TATTGGA-GAAGTCGTGC-AAGTAAGTTATGATGAATTGAGTTTGGCGCAGAAAGATGCA 1392 Query 1264 TTTCTAGACATAGCCTGCTTCAGATCGCATGATGTAGAATATATAGAAAGTCTATTGGCT 1323 ||||| |||||||| || |||||||| || ||||| || ||| |||||||| || ||| | Sbjct 1393 TTTCTCGACATAGCTTGTTTCAGATCACAGGATGTGGATTATGTAGAAAGTTTACTGGTT 1452 Query 1324 TCATCT-A--C--G----G--G-AGCAGTAGAAGCCCTTTC-CG-ATATGTGCCTGATTA 1369 || ||| | | | | | |||| || ||| || || | ||| || | ||||| Sbjct 1453 TCGTCTGACCCTGGATCTGCTGAAGCAATAAAAG--CTCTCAAGAATAAGTTCTTGATTG 1510 Query 1370 ATACTTGTGACGGTCGAGTGGAGATGCATGATCTTCTGTATA-CTTTGTCAAGGGAACTT 1428 |||| |||||||| || ||||||||||||||||| ||||||| ||| || ||||||||| Sbjct 1511 ATACATGTGACGGCCGTGTGGAGATGCATGATCTACTGTATAGATTT-TCTAGGGAACTT 1569 Query 1429 GATCCTAAAGCATCCACTCAAATTGGTGGTAGCAAACAACGGAGGCTGTGGCTCCATCAA 1488 |||| |||||||||||||| || ||||||||||||||||| ||| | ||| | | | Sbjct 1570 GATCTTAAAGCATCCACTC-AA--GGTGGTAGCAAACAACGAAGGTTATGGGT-C--C-- 1621 Query 1489 GACATTATCAAGGAAGGCACAATTAATGTTCTGAAGAATAA-ACTGGTGAGACCT--AAG 1545 | |||| | | || ||||||||| | | |||| || | ||| ||| || || Sbjct 1622 G------TCAA-G-A--CATAATTAATGTACAGCAGAA-AACAATGG-GAG--CTGCAA- 1666 Query 1546 GATGTGAGAGGAATTTTCCTAGACTTGTCTGAAGTGGAAGG-CGAAATATGCTTAGATTG 1604 |||| ||||| ||||||||||| ||||||||||| ||||| |||| | ||||||| | Sbjct 1667 -ATGTTAGAGGTATTTTCCTAGATTTGTCTGAAGT-GAAGGTTGAAACAAGCTTAGACCG 1724 Query 1605 CGACCACTTCGAAG-ATATGTGTAATCTTCGGTACCTCAAGTTCTACAATTCTCATTGTC 1663 || |||||| ||| ||||| | ||||| ||||| |||||||| |||||||| ||||| | Sbjct 1725 TGAACACTTC-AAGAATATGCGCAATCTCCGGTATCTCAAGTTATACAATTCACATTG-C 1782 Query 1664 CC-CAGGAATGTAAAACTACCAATAAGATAAACACCCCTGAAGGAGTTAAGTTACCATTG 1722 || || |||||| ||| | ||||||||||||| ||||| ||| || || |||||||| Sbjct 1783 CCTCACGAATGTCTAACCAATAATAAGATAAACATGCCTGATGGACTTGAGCTACCATTG 1842 Query 1723 AAAAAGGTTCGATGCCTCCACTGGCTAG-AATTCCCGTTGGAAGAATTTCCAAACGATTT 1781 ||| ||||||||||||| |||||||| | ||||||| || || ||| ||||||||||||| Sbjct 1843 AAAGAGGTTCGATGCCTTCACTGGCT-GAAATTCCCATTAGAGGAACTTCCAAACGATTT 1901 Query 1782 TGACCCGATTAATCTCGTTGACCTTAAGCTGCC-TCGCAGCAAGATTAAACAACTCTGGG 1840 |||||||||||||||||| |||||||||||||| | ||| ||||| ||| ||| |||| Sbjct 1902 TGACCCGATTAATCTCGTCGACCTTAAGCTGCCATA-CAGTGAGATTGAACGACTTTGGG 1960 Query 1841 AGGGTGACAAGGATACACCATTCTTAAAGTGGGTCGATCTCCAGCACTCAAGTAAGTTGT 1900 | |||| |||||||||||| ||||||| |||||||||||| | |||||||||||||||| Sbjct 1961 ATGGTGTTAAGGATACACCAGTCTTAAAATGGGTCGATCTCAATCACTCAAGTAAGTTGT 2020 Query 1901 GCAGCTTGTCAGGGTTATTAAAGGCTGAAAAGCTTCAAAGATTGAACCTTGAAGGTTGCA 1960 ||||||||||||| |||| ||||||| |||| ||||||||| ||||||||||||| |||| Sbjct 2021 GCAGCTTGTCAGGATTATCAAAGGCTCAAAATCTTCAAAGACTGAACCTTGAAGGGTGCA 2080 Query 1961 CAA 1963 ||| Sbjct 2081 CAA 2083 > AT2G17060.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr2:7422411-7426877 FORWARD LENGTH=3588 Length=3588 Score = 150 bits (81), Expect = 7e-35 Identities = 268/354 (76%), Gaps = 30/354 (8%) Strand=Plus/Plus Query 2452 ATCAGTCACCTTTCTCAACTAAAATGGC-TGAACCTGAAGTATTGTACGAAGCTTACATC 2510 ||||| || |||| ||| || ||||||| || || ||||| |||| | |||||||| ||| Sbjct 2716 ATCAGCCAGCTTTATCATCTGAAATGGCTTG-ACTTGAAGAATTGCAAGAAGCTTAAATC 2774 Query 2511 TGT-TCCAGAGTTTCCACCAAATCTTC-AGTGCTTAGATGCACACGGCTGTAG-TTTGCT 2567 ||| | | | | |||||||||| | || |||||||||||||||| || ||| | | || Sbjct 2775 TGTGT-CGGTGCTTCCACCAAA-CCTCAAGTGCTTAGATGCACATGGTTGT-GACTCACT 2831 Query 2568 -GAAGACAGTTTCAAAG-CCTTTGGCCCG-TATCATGCCAAC-CGAACAGAAT-CATTCC 2622 ||||| || || ||| ||| | | | | | ||||| || ||| | ||| |||| | Sbjct 2832 GGAAGA-AG-TTGGAAGCCCTCTAG-CGGTTCTCATGGTGACAGGAA-A-AATCCATTGC 2886 Query 2623 ACATTCATTTTCACCAACTGTC-AGAACCTGGAACAAGCTGCA-AAGGAGGAA-ATCACA 2679 |||| ||||||||| ||||| | | || |||| |||| |||| || || || |||| | Sbjct 2887 ACATACATTTTCACAAACTG-CAACAAATTGGATCAAGTTGCAGAA--AGTAACATCATA 2943 Query 2680 TCGTAT-GCTCAAAGGAAATGCCAGCTGTTATCATATGTTCGT-AAACGCTACAATGGGG 2737 || | | || |||||| ||||| || | ||| ||| || | || ||||||||||||| Sbjct 2944 TC-TTTCACTTGGAGGAAAAGCCAGATGATGTCAGATGCTC-TGAATCGCTACAATGGGG 3001 Query 2738 G-TCTTGTTTCAGAGTCTTTGTTCAGCACTTGCTTTCCTGGATGTGAAGTGCCT 2790 | | |||||| || |||||| |||||||||||||||||||||||||||| ||| Sbjct 3002 GAT-TTGTTTTGGAATCTTTGGTCAGCACTTGCTTTCCTGGATGTGAAGTACCT 3054 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 169915435941 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5