BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915598
Length=3414
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-N... 2649 0.0
AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 813 0.0
AT2G17060.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 150 7e-35
> AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18321914-18326022 REVERSE LENGTH=3654
Length=3654
Score = 2649 bits (1434), Expect = 0.0
Identities = 2446/2903 (84%), Gaps = 195/2903 (7%)
Strand=Plus/Plus
Query 536 GAAACGAACGACGCCTAGAGGAATTGGAAGAGAAGCTGGAT--T-TTGAAGACGATAGTC 592
||||||||| ||| || | || |||||||||||| ||||| | | || || | ||
Sbjct 626 GAAACGAACAACGGTTAAAAGATTTGGAAGAGAAGTTGGATCGTGATAAATAC-A-AG-G 682
Query 593 GAACTCGTATCATTGGAGTTTTTGGGATGCCTGGAATTGGTAAAACCACACTCTTAAAAG 652
|||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||||
Sbjct 683 GAACTCGTATCATTGGAGTTGTTGGGATGCCCGGAATTGGTAAAACCACACTCCTGAAAG 742
Query 653 AGCTCTTTAAGAAGTGG-AAGCCTAAGTTCATT--AGGCATTCGTTAGTTGATCAAATCC 709
|||| | ||||| |||| | | | ||||| || |||||| || || | ||||||||||
Sbjct 743 AGCTATATAAGACGTGGCAGGGC-AAGTT--TTCGAGGCATGCGCTAATCGATCAAATCC 799
Query 710 GTCG-AAAGTCAGAAG-AC-TCCAG-T-GTTTGTTTACCCACAACT-CTCTTAGGAGAGT 763
|| | |||||| ||| || | || | | | | || || ||| | |||||||| ||||
Sbjct 800 GT-GTAAAGTC-CAAGCACTTGGAGTTGGATCGCTT-GCCTCAAATGCTCTTAGGCGAGT 856
Query 764 TGCTGACGTCGTTGGCA-GATCC-C-CGGATTGACAATGAT-GAAGACCCATACAACATG 819
|| | | ||| | |||| | | | | |||||| | |||| |||| ||| |
Sbjct 857 TG-T--CCAAGTT-AAACCATCCTCAC-G-TAGACAAT-CTCAAAGATCCAT---ACA-G 905
Query 820 TACAAGGATGAGCTGC-TCAAACGCAAAGTTCTTGTCATTCTTGACGATGTTAGTACAAG 878
| | | | |||| | |||||||||| ||||| | ||||| |||||||||| |||
Sbjct 906 T-C----A--A-CTGCAT-GAACGCAAAGTGCTTGTTGTACTTGATGATGTTAGTAAAAG 956
Query 879 GGAACAAATAGATGCTCTTC-TCGGGAGACGT-GACTGGATT-A--A--G-AA--A-GGA 927
|||||||||||||||||||| | | || || | ||||||||| | | | || | |||
Sbjct 957 GGAACAAATAGATGCTCTTCGT-GAGATAC-TAGACTGGATTAAGGAGGGTAAGGAGGGA 1014
Query 928 AGCAAGATTGTCATTGCAACAAGTGACATGTCATTAACAAATGGCCTGGTTGATGATACT 987
|||| | |||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 1015 AGCAGGGTTGTCATTGCAACAAGCGACATGTCCTTAACAAATGGTTTGGTTGATGATACT 1074
Query 988 TACATGGTCCAAAAATTGAACCACAGAGACAGCTTACAAGTTTTTCACTATCATG-C-TT 1045
|||||||| ||||| |||||||||||||| ||||||||| | ||||||||||||| | ||
Sbjct 1075 TACATGGTTCAAAATTTGAACCACAGAGATAGCTTACAACTATTTCACTATCATGCCTTT 1134
Query 1046 -CTGTTGAT--A---AAT-C-C--AAGGATGATTTCATGAAGCTGTCGGAAGAGTTTGTA 1095
|| |||| | ||| | | ||| | ||||||||||||||||| |||| |||||||
Sbjct 1135 ATTGATGATCAAGCCAATCCTCAAAAGAAAGATTTCATGAAGCTGTCAGAAGGGTTTGTA 1194
Query 1096 CATTACTCCAGAGGCCACT-CACTAGCTCTCAAAGTATTGGGTGGAGATCTTAAGAAGCA 1154
|||||| |||||||||| | ||||||| |||||||||||||||||||| ||||| ||| |
Sbjct 1195 CATTACGCCAGAGGCCA-TCCACTAGCCCTCAAAGTATTGGGTGGAGAGCTTAATAAG-A 1252
Query 1155 AAA-TATAGATTATTGGAA-T-GACAAACTGAAGACACTCACACAAAGTCCCATCCC--- 1208
||| ||| ||| ||||||| | || ||| |||||| ||| |||| || |||| |||
Sbjct 1253 AAAGTATGGATCATTGGAATTCGA-AAA-TGAAGAAACTTGCACAGAGCCCCAGCCCTAA 1310
Query 1209 --TCGAC-GCGTCTTCAAAGTAAGTTATGATGAATTGAGTTCAGAGCAAAAAGATGCATT 1265
| | | | |||||| |||| |||||||||||||||| | ||| ||| |||||||||||
Sbjct 1311 TATTGTCAGTGTCTTCCAAGTGAGTTATGATGAATTGACTACAGCGCAGAAAGATGCATT 1370
Query 1266 TCTAGACATAGCCTGCTTCAGATCGCATGATGTA-GAATATATAGAAAGTCTATTGGCTT 1324
||| ||||||||||| |||||||| || || | || ||| ||||||||||| ||||||
Sbjct 1371 TCTCGACATAGCCTGTTTCAGATCACAGGA-CAAGGATTATGTAGAAAGTCTACTGGCTT 1429
Query 1325 CATCT-A--------CGG--G-AGCAGT-A--GAAG-C---CCTTTC-C-GATATGTGCC 1363
||||| | ||| | |||| | | | || | || || | |||| || ||
Sbjct 1430 CATCTGACCTTGGTTCGGCTGAAGCAATGAGTGCAGTCAAATCTCTCACGGATAAGTTCC 1489
Query 1364 TGATTAATACTTGTGACGGTCGAGTGGAGATGCATGATCT-TCTGTAT-ACTTTGTCAAG 1421
|||||||||||||||| || |||||||||||||||||||| | | ||| | ||| |||||
Sbjct 1490 TGATTAATACTTGTGATGGCCGAGTGGAGATGCATGATCTAT-TATATAAATTT-TCAAG 1547
Query 1422 GGAACTTGATCCT-AAAGCATCCACTCAAATTGG-TGGTAGCAAACAACGGAGGCTGTGG 1479
|||| ||||| || || ||||| | || | || |||||||| ||||||||||||||||
Sbjct 1548 GGAAGTTGAT-CTGAAGGCATCTAATC--A--GGATGGTAGCAGACAACGGAGGCTGTGG 1602
Query 1480 CTCCATCAAGACATTATCAAGGAAGGCACAATTAATGT-TCTG-AAGAATAAACTGGTGA 1537
||||||||| |||| ||||||| ||||| ||| ||||| | || || |||||| |||
Sbjct 1603 CTCCATCAACACATAATCAAGGGAGGCATAATCAATGTAT-TGCAA-AATAAA---ATGA 1657
Query 1538 GACCTAAGGATGTGAGAGGAATTTTCCTAGACTTGTCTGAAGTGGAAGGCGAAA-TATGC 1596
| || |||| ||||| |||||||||||||||||||||||||||| ||||| | ||
Sbjct 1658 AAGCTGCCAATGTTAGAGGTATTTTCCTAGACTTGTCTGAAGTGGAAGACGAAACGA-GC 1716
Query 1597 TTAGATTGCGACCACTTCGA-AGATATGTGTAATCTTCGGTACCTCAAGTTCTACAATTC 1655
||||| ||||||||||| | | ||||| | ||||| ||||| |||||||||||||||||
Sbjct 1717 TTAGACCGCGACCACTTC-ATAAATATGGGAAATCTCCGGTATCTCAAGTTCTACAATTC 1775
Query 1656 TCATTGTCCCCAGGAATGTAAAACTACCAATAAGATAAACACCCCTGA-AGGAGTTAAGT 1714
|||||||| |||||||||||||| | |||||| || |||| |||||| | | |||||
Sbjct 1776 CCATTGTCCACAGGAATGTAAAACCAACAATAAAATCAACATCCCTGATA-AACTTAAGC 1834
Query 1715 TACCATTGAAA-AAGGTTCGATGCCTCCACTGGCTAG-AATTCCCGTTGGAAGA-ATTTC 1771
||||||||||| || |||||||||||||||||||| | ||||||| |||| ||| | |||
Sbjct 1835 TACCATTGAAAGAA-GTTCGATGCCTCCACTGGCT-GAAATTCCCATTGG-AGACACTTC 1891
Query 1772 CAAACGATTTTGACCCGATTAATCTCGTTGACCTTAAGCTG-CCTCGCAG-CAAGATTAA 1829
|||||||||| |||| |||||||| || |||||||||||| ||| ||| || || |
Sbjct 1892 CAAACGATTTCAACCCAATTAATCTTGTCGACCTTAAGCTGCCCT-ACAGTGAA-ATGGA 1949
Query 1830 ACAACTCTGGGAGGGTGACAAGGATACACCATTCTTAAAGTGGGTCGATCTCCAGCACTC 1889
|||||| ||||||||||||||||| ||||||| ||||| ||||||||||||| | |||||
Sbjct 1950 ACAACTTTGGGAGGGTGACAAGGACACACCATGCTTAAGGTGGGTCGATCTCAATCACTC 2009
Query 1890 AAGTAAGTTGTGCAGCTTGTCAGGGTTATTAAAGGCTGAAAAGCTTCAAAGATTGAACCT 1949
||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct 2010 AAGTAAGTTGTGCAGCTTGTCAGGGTTATCAAAAGCTGAAAAGCTTCAAAGGTTGAACCT 2069
Query 1950 TGAAGGTTGCACAACACTGAAAACGTTGCCACATGATATGCACAAAATGAAAGTGCTTAG 2009
|||||||||||||||||||||| |||| |||||||||||| | ||||||||| ||||| |
Sbjct 2070 TGAAGGTTGCACAACACTGAAAGCGTTTCCACATGATATGAAAAAAATGAAAATGCTT-G 2128
Query 2010 -TTTCCTGAATCTGAAAGGGTGCACAAGTCTCGAATTTCTTCCAGAGATGAATTTGGTTT 2068
|||| |||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||
Sbjct 2129 CTTTCTTGAATCTGAAGGGGTGTACAAGTCTCGAATCTCTTCCAGAGATGAATTTGATTT 2188
Query 2069 CTCTGAAAACACTTACTCTCAGCGGCTGCTCAAGTTTTAAAGATTTTCCGTTGATTTCAG 2128
||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||
Sbjct 2189 CTCTGAAAACACTTACTCTCAGCGGCTGCTCAACTTTTAAGGAATTTCCGTTGATTTCAG 2248
Query 2129 ATAATATAGAAACACTATACTTAGATGGCACAGAAATAAGTCAGCTTCCTACGAACATGG 2188
||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 2249 ATAATATAGAAACTCTATACTTAGATGGCACAGCAATAAGTCAGCTTCCTATGAACATGG 2308
Query 2189 AGAAGCTCCAGAGCCTTGTGGTATTGAATATGAAAGACTGCAAAATGCTGGAGGAAATCC 2248
||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct 2309 AGAAGCTTCAGAGACTTGTTGTATTGAATATGAAAGACTGCAAAATGCTAGAGGAAATTC 2368
Query 2249 CAGGTCGTGTTAATGAGCTGAAAGCTCTTCAAGAACTGATACTCTCTGATTGTTTCAACC 2308
|||| |||||| |||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2369 CAGGCCGTGTTGGTGAGCTGAAAGCTCTTCAAGAACTGATACTCTCTGATTGTTTAAATC 2428
Query 2309 TAAAGAATTTCCCTGAAATCAACATGAGCTCTTTAAACATTTTACTTTTGGATGGGACAG 2368
| |||| |||||| |||||| |||| |||| |||||||||||||||||||||||||||||
Sbjct 2429 TCAAGATTTTCCCAGAAATCGACATTAGCTTTTTAAACATTTTACTTTTGGATGGGACAG 2488
Query 2369 CCGTAGAAGTGATGCCACAATTACCCTCAGTGCAGTATTTGAGCTTAAGCAGAAATACGA 2428
|| | |||||||||||||||||||||||||||||||||||| |||||||||||||| | |
Sbjct 2489 CCATTGAAGTGATGCCACAATTACCCTCAGTGCAGTATTTGTGCTTAAGCAGAAATGCTA 2548
Query 2429 AGATCAGCTGCCTTCCTATTGGAATCAGTCACCTTTCTCAACTAAAATGGCTGAACCTGA 2488
||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct 2549 AGATCAGCTGCCTTCCTGTTGGAATCAGTCAGCTTTCTCAACTTAAATGGCTGGACCTGA 2608
Query 2489 AGTATTGTACGAAG-CTTACATCTGTTCCAGAGTTTCCACCAAATCTTCAGTGCTTAGAT 2547
||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2609 AGTATTGTACG-AGTCTTACATCAGTTCCAGAGTTTCCACCAAATCTTCAGTGCTTAGAT 2667
Query 2548 GCACACGGCTGTAGTTTGCTGAAGACAGTTTCAAAGCCTTTGGCCCGTATCATGCCAACC 2607
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2668 GCACACGGCTGTAGTTCGCTGAAGACAGTTTCAAAGCCTTTGGCCCGTATCATGCCAACT 2727
Query 2608 GAACAGAATCATTCCACATTCATTTTCACCAACTGTCAGAACCTGGAACAAGCTGCAAAG 2667
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2728 GAACAGAATCATTCCACATTCATTTTCACCAACTGTGAGAACCTGGAACAAGCTGCAAAG 2787
Query 2668 GAGGAAATCACATCGTATGCTCAAAGGAAATGCCAGCTGTTATCATATGTTCGTAAACGC 2727
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 2788 GAGGAAATCACATCGTATGCTCAAAGGAAATGCCAGCTGTTATCATATGCTCGGAAACGC 2847
Query 2728 TACAATGGGGGTCTTGTTTCAGAGTCTTTGTTCAGCACTTGCTTTCCTGGATGTGAAGTG 2787
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2848 TACAATGGGGGTCTTGTTTCAGAATCTTTGTTCAGCACTTGCTTTCCTGGATGTGAAGTG 2907
Query 2788 CCTTCTTGGTTTTGTCATGAAACAGTTGGATCTGAGTTAGAAGTAAAACTCCTCCCACAT 2847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2908 CCTTCTTGGTTTTGTCATGAAACAGTTGGATCTGAGTTAGAAGTAAAACTCCTCCCACAT 2967
Query 2848 TGGCATGACAAGAAGCTTGCCGGGATTGCTCTATGTGCTGTAGTCTCATGTCTTGACCGC 2907
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2968 TGGCATGACAAGAAGCTTGCCGGGATTGCTCTATGTGCTGTAGTCTCATGTCTTGACCCC 3027
Query 2908 CAAGATCAAATCAGTCGATTTTCAGTGACATGCACCTTTAAGGT------TGAAGACAAG 2961
||||||||| |||| || || |||||||| ||||||||||| || ||||||||||
Sbjct 3028 CAAGATCAAGTCAGCCGCTTGTCAGTGACCTGCACCTTTAAAGTAAAAGATGAAGACAAG 3087
Query 2962 TCTTGGATCCCATTTACTTTTCCAGTAGGAAGTTGGACCAGACATGAAGACGGAAAAGTG 3021
|||||| || ||| ||||| |||||||||||||||||||||||||| || ||
Sbjct 3088 TCTTGGGTCGCATATACTTGTCCAGTAGGAAGTTGGACCAGACATG--GA-GG------- 3137
Query 3022 ACCAGACATGAAGACGAAAAAGACAAGATTGAG-TCAGACCATGTGTTTATTGGTTACAC 3080
| | | || || || ||||||||| | ||||||||| || ||||| |||||
Sbjct 3138 -C--G----G--GA--AA---GATAAGATTGAGCT-AGACCATGTCTTCATTGGATACAC 3182
Query 3081 CAGTTACCCACATACTATAAAGTGTCCTGAAGACGGTAACTCGGATAAATGCAATTCTAC 3140
||||| ||||||||||||||| |||| |||||| |||||||| ||| |||||||| ||||
Sbjct 3183 CAGTTGCCCACATACTATAAAATGTCATGAAGAAGGTAACTCAGATGAATGCAATCCTAC 3242
Query 3141 CCAAGCCTCCCTTAATTTTACTATCACAGGTGCG-A-A--TGAAAA-GCT---TA-A-GG 3190
| ||||||| ||||| |||||| | ||||| | | | | ||| || | || | ||
Sbjct 3243 CGAAGCCTCTCTTAAATTTACTGTGACAGGAG-GTACAAGTGAGAATGGAAAATACAAGG 3301
Query 3191 TGTTGCAGTGTGGTTTCAGTCTGGTGTATGC-AAGGGATAA-GTACAAAAACAGTTCTCA 3248
||||| |||||||||| ||| |||||||||| |||| |||| | ||||||| ||| |||
Sbjct 3302 TGTTGAAGTGTGGTTTAAGTTTGGTGTATGCTAAGG-ATAAAG-ACAAAAATAGTGCTCT 3359
Query 3249 TGAAGGAAAGTACGATATGCC-AGTTGAAAAGAACTTTCAAGAAACTACAGAAGGGGTTT 3307
|||| |||||||||||||| | ||| ||||| ||||||||||||| |||||||||||
Sbjct 3360 TGAAACAAAGTACGATATGCTTA-TTGGAAAGAGCTTTCAAGAAACTTCAGAAGGGGTTG 3418
Query 3308 ATGGAAGAGTaaagaaaaagaaa 3330
||||||| |||||||||| ||||
Sbjct 3419 ATGGAAGGGTAAAGAAAACGAAA 3441
Score = 217 bits (117), Expect = 7e-55
Identities = 131/138 (95%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 3251 AAGGAAAGTACGATATGCCAGTTGAAAAGAACTTTCAAGAAACTACAGAAGGGGTTTATG 3310
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 3440 AAGGAAAGTACGTTATGCCTGTTGAAAAGAACTTTCAAGAAACTACAGAAGGGGTTGATG 3499
Query 3311 GAAGAGTaaagaaaaagaaaaaaaCAAGAAGGGATAATGGACGGCCAAAAAAGAAGCAAA 3370
|||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| |
Sbjct 3500 GAAGAGTAAATAAAAAGAAAAAAACAAGAATGGATAATGGACGGCCAAAGAAGAAGCAGA 3559
Query 3371 GATCAGGAAGAGATGATA 3388
||||||||||||||||||
Sbjct 3560 GATCAGGAAGAGATGATA 3577
> AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18182038-18186495 FORWARD LENGTH=3926
Length=3926
Score = 813 bits (440), Expect = 0.0
Identities = 1111/1420 (78%), Gaps = 105/1420 (7%)
Strand=Plus/Plus
Query 2014 CTGAATC-TGAAAGGGTGCACAAGTCTCGAATTTCTTCCAGA-GATGAATTTGGTTTCTC 2071
||||| | || |||||||||||||||| |||| ||||| ||| | |||||||| |||
Sbjct 2062 CTGAACCTTG-AAGGGTGCACAAGTCTTGAATCTCTTCGAGATG-TGAATTTGACGTCTT 2119
Query 2072 TGAAAACACTTACTCTCAGCGGCTGCTCAAGTTTTAAAGATTTTCCGTTGATTTCAGATA 2131
||||||| || || |||||| |||||||| || || || ||||| |||||| |||| |
Sbjct 2120 TGAAAACTCTCACCCTCAGCAACTGCTCAAACTTCAAGGAATTTCCATTGATTCCAGAAA 2179
Query 2132 ATATAGAAA-CACTATACTTAGATGGCACAGAAATAAGTCAGCTTCCT-ACGAACATGGA 2189
|| || ||| | ||||||| || || ||| |||||||| |||||| || ||| |||
Sbjct 2180 ATTTA-AAAGCTTTATACTTGGACGGGACATCGATAAGTCAACTTCCTGAC-AACGTGGG 2237
Query 2190 GAAGCTCCAGAGCCTTGTGGTATTGAATATGAAAGACTGCAAAATGCTGGAGGA-AATCC 2248
||| ||| | || ||||| ||||||||||||| ||||||||| ||||||| || ||||
Sbjct 2238 GAACCTCAAAAGACTTGTCTTATTGAATATGAAGGACTGCAAAGTGCTGGA-GACTATCC 2296
Query 2249 C-AGGTCGTGTTAATGAGCTGAAAGCTCTTCAAGAAC-TGATACTCTCTGATTGTTTC-A 2305
| | | |||||| |||||||||| |||||||| ||| || |||| || | ||| ||| |
Sbjct 2297 CTACCT-GTGTTAGTGAGCTGAAAACTCTTCAAAAACTTG-TACTTTCAGGTTG-TTCAA 2353
Query 2306 ACCT-AAAGAATTTCCCTGAAATCAACATGAGCTCTTTAAACATTTTACTTTTGGATGGG 2364
| || || |||||| || |||||||||| |||||||||||| ||||||||| | ||||||
Sbjct 2354 AGCTCAAGGAATTT-CCAGAAATCAACAAGAGCTCTTTAAAAATTTTACTTCTAGATGGG 2412
Query 2365 ACAGCCGT-AGAAGTGATGCCACAATTACCCTCAGTGCAGTATTTGA-GCTTAAGCAGAA 2422
||| || | | || |||||| || ||||||||||| |||||||| | ||||||||||||
Sbjct 2413 ACATCCATCA-AAACGATGCCGCAGTTACCCTCAGTACAGTATTT-ATGCTTAAGCAGAA 2470
Query 2423 ATACGA--AGATCAGCTGCCTTCCTA-TTGGAATCAGTCACCTTTCTCAACTAAAATGGC 2479
|| || | ||| || |||||| | ||| |||| ||| ||||||| ||| | |||
Sbjct 2471 AT--GATCATCTCATCTACCTTCC-AGCTGGCATCAATCAAGTTTCTCAGTTAACACGGC 2527
Query 2480 TGAACCTGAAGTATTGTACGAAGCTTACATCTGTTCCAGAGTTTCCACCAAATCTTCAGT 2539
|| | |||||||||||||||||||||||| |||||||||||| ||||||| ||| ||||
Sbjct 2528 TGGATTTGAAGTATTGTACGAAGCTTACATATGTTCCAGAGTTGCCACCAACTCTCCAGT 2587
Query 2540 GCTTAGATGCACACGGCTGTAGTTTGCTGAAGACA-GTTTCAAAGCCTTTGGCCCGTATC 2598
|||||||||||| |||||||| | ||||||| | ||| |||| || |||||||||||
Sbjct 2588 ACTTAGATGCACATGGCTGTAGCTCACTGAAGA-ATGTTGCAAAACCACTGGCCCGTATC 2646
Query 2599 ATGCCAACCGAACAGAATCATTCCACATTCATTTTCACCAACTGTCAG-AACCTGGAACA 2657
||| |||||| ||||| |||| ||| |||| ||||||||||||| | |||||||| ||
Sbjct 2647 ATGTCAACCGTGCAGAACCATTACACTTTCAATTTCACCAACTGT-GGTAACCTGGAGCA 2705
Query 2658 AGCTGCAAAGGAGGAAATCACATCGTATGCTCAAAGGAAATGCCAGCTGTTATCATATGT 2717
|||||||||||||||||||||||||||||||||||| ||||| ||| || | ||| |||
Sbjct 2706 AGCTGCAAAGGAGGAAATCACATCGTATGCTCAAAGAAAATGTCAGTTGCTGTCAGATGC 2765
Query 2718 TCGTAAACGCTACAATGGGGGTCTTGTTTCAGAGTCTTTGTTCAGCACTTGCTTTCCTGG 2777
||||||| |||||||| |||| | ||||| |||||||||||||||||||||||||
Sbjct 2766 ACGTAAACACTACAATGAGGGT-T-----CAGAGGCTTTGTTCAGCACTTGCTTTCCTGG 2819
Query 2778 ATGTGAAGTGCCTTCTTGGTTTTGTCATGAAACAGTTGGATCTGAGTTAG-AA-GTAAAA 2835
|||||| |||||||| |||||| |||||||| | ||||||||| ||| | || | ||||
Sbjct 2820 ATGTGAGGTGCCTTCGTGGTTTGGTCATGAAGCGGTTGGATCTCTGTT-GCAAAG-AAAA 2877
Query 2836 CTCCTCCCACATTGGCATGACAAGAAGCTTGCCGGGATTGCTCTATGTGCTGTAGTCTCA 2895
||||||||||||||||||||||||| |||| | || || |||||||||||||||||||||
Sbjct 2878 CTCCTCCCACATTGGCATGACAAGAGGCTTTCTGGAATAGCTCTATGTGCTGTAGTCTCA 2937
Query 2896 TGTCTTGACCGCCAAGATCAAATCAG-TCGATTTTCAGTGACATGCACCTTTAAGGT--- 2951
| || |||| ||||||||||| |||| | | || || ||||||||||||||||| |
Sbjct 2938 TTTCCTGACAGCCAAGATCAACTCAGCT-GCTTCTCGGTGACATGCACCTTTAAAATAAA 2996
Query 2952 ---TGAAGACAAGTCTTGGATCCCATTTACTTTTCCAGTAGGAAGTTGGACCAGACATGA 3008
|||||||||||||||| |||| ||||||| || ||||||| |||||| ||| ||
Sbjct 2997 AGCTGAAGACAAGTCTTGGGTCCCCTTTACTTGCCCGGTAGGAATTTGGACTAGA---GA 3053
Query 3009 AGACGGAAAAGTGACCAGACATGAAGACGAAAAAGACAAGATTGAGTCAGACCATGTGTT 3068
| ||||| | ||| | | ||| | | ||||||||| || ||||| ||
Sbjct 3054 -G--GGAAAC---A--AGA-A--A-GAC-A----G----GATTGAGTCGGATCATGT-TT 3091
Query 3069 T-ATTGGTTACACCAGTTA-CCCACATACTATAAAGTGTC-CTGAAGACG--GTAACTCG 3123
| || | |||| ||| | ||||||| | |||| ||||| | ||||| | | |||||
Sbjct 3092 TCATAGCCTACATTAGT-AGCCCACATTCAATAAGGTGTCTC-GAAGA-GAAG-AACTCT 3147
Query 3124 GATAAATGCAATTCTACCCAAGCCTCCCTTAATTTTACTATCACAGGTGCGA-A--TGAA 3180
||||||||||||| || ||||||||||| | ||||| | ||| ||| | | ||
Sbjct 3148 GATAAATGCAATTTTAGTGAAGCCTCCCTTGAGTTTACGGTGACAAGTGATACAAGTGGT 3207
Query 3181 A----AGC-TT-AAGGTGTTGCAGTGTGGTTTCAGTCTGGTGTATGCAAGGGATAAGTAC 3234
| || || ||||| ||| ||||||| || ||| ||||||||| || || || ||
Sbjct 3208 ATTGGAGTATTCAAGGTTTTGAAGTGTGGATTGAGTTTGGTGTATGAAAATGACAAAAAC 3267
Query 3235 AAAAACAGTTCTCATGAAGG-AAAGTACGATATGCCAGTTGAAAAGAACTTTCAAGAAAC 3293
||||||||||||| ||| || |||||| ||| | || |||||| || |||||||||| |
Sbjct 3268 AAAAACAGTTCTCTTGA-GGCAAAGTATGATGTTCCTGTTGAAGTGAGCTTTCAAGAA-C 3325
Query 3294 TACAGAAG--GGGTTTATGGAAGAGTaaagaaaaagaaa-aaaaCAAGAAGGGATAATGG 3350
||||| ||| | ||||| ||| | ||| | | ||| |||| |||||| ||| || |
Sbjct 3326 --CAGAACACGGGATAATGGAGGAGGAGAGATATATAAACAAAAGAAGAAGTGATGATAG 3383
Query 3351 ACGGCCAAAAAAGAAGCA--AAGATCAGGAAGAGATGATA 3388
||| |||||||||||| | |||| || ||| |||||||
Sbjct 3384 ACGACCAAAAAAGAAG-AGGAAGA-CAAAAAGGGATGATA 3421
Score = 660 bits (357), Expect = 0.0
Identities = 1147/1503 (76%), Gaps = 156/1503 (10%)
Strand=Plus/Plus
Query 554 AGGAATTGGAAGAGAAGCTGGA--TT-TTGAAGACGATAGTCGAACTCGTATCATTGGAG 610
|||| |||||||||||| |||| || || || || | || |||||||| |||||||||
Sbjct 644 AGGAGTTGGAAGAGAAGTTGGATCTTGTTAAATAC-A-AG-GGAACTCGTGTCATTGGAG 700
Query 611 TTTTTGGGATGCCTGGAATTGGTAAAACCACACTCTTAAAAGAGCTCTTTAAGAAGTGG- 669
|| ||||||||||||||||||| ||||||||||| | |||||||||| ||||| |||
Sbjct 701 TTGTTGGGATGCCTGGAATTGGCAAAACCACACTGGTGAAAGAGCTCTATAAGACCTGGC 760
Query 670 AAGCCTAAGTTCATT--AGGCATTCGTTAG-TTGATCAAATCCGTCGAAAGTCAGAA-GA 725
| | | ||||| || ||| || |||| | | |||||||||||| | |||||| || |
Sbjct 761 AGGGC-AAGTT--TTCGAGGTATGCGTT-GATCGATCAAATCCGTGGGAAGTCA-AATAA 815
Query 726 CTCCA-G-T-GTTTGTTTACCCACAACT-CTCTTAGGAG-AGTTGCTGA-CGTCGTTGGC 779
|| || | | | || || || || | || ||| ||| || | || | || ||| |
Sbjct 816 CTTCAGGTTAGAGTGCTTGCCTAC-TTTGCTTTTA-GAGAAGCTACT-ACCGGAGTT-GA 871
Query 780 A-GATCCCCGGA-TTGACAATGA-TGAAGACCCATACAACATGT-ACAAGGAT-GAGCTG 834
| |||| | | | || | | | |||||| |||||||| | | | |||| | | |||
Sbjct 872 ATAATCCTC-AACTAGATAGT-ATTGAAGAACCATACAA-AACTCATAAGGGTCTA-CTG 927
Query 835 C-TCAAACGCAAAGTTCTTGTCATTCTTGACGATGTTAGTACAAGGGAACAAATAGATGC 893
| | ||||||||||||| ||| | ||||| |||||||||| ||||||||||||| ||||
Sbjct 928 CGT-GAACGCAAAGTTCTCGTCGTCCTTGATGATGTTAGTAGAAGGGAACAAATATATGC 986
Query 894 TCTTCTCGGG----A-G------AC-G------TGACTGGAT-TAAGAAAGGAAGCAAGA 934
|||||| ||| | | || | ||| ||||| ||| | || |||| ||
Sbjct 987 TCTTCTTGGGAAATATGATCTTCACAGTAAACATGAGTGGATCAAAG-ATGGCAGCAGGA 1045
Query 935 TTGTCATTGCAAC-AAGTGACATGTCATTAACAAATGGCCTGGTTGATGATACTTACATG 993
| |||||||||| || || || || | | || || || ||| |||| ||||| ||
Sbjct 1046 TCATCATTGCAACGAA-CGATATCTCCTCATTGAAGGGTCTCGTTCATGACACTTATGTG 1104
Query 994 GTCCAAAAATTGAACCACAGAGACAGCTTACAAGTTTTTCACTATCATG-C-TTC-TGT- 1049
|| | |||| |||||||||||| |||||||| |||||| |||||| | | ||| | |
Sbjct 1105 GTTCGGCAATTAAACCACAGAGACGGCTTACAACTTTTTCGCTATCACGCCTTTCAT-TA 1163
Query 1050 TGAT-AA---A----TCC-AAGGAT-GATTTCATGAAGCTGTCGGAAGAGTTTGTACATT 1099
|||| || | ||| |||| | |||||||||||||| || || |||||||| ||||
Sbjct 1164 TGATCAAGCCACTCCTCCAAAGG-TGGATTTCATGAAGCTTTCTGATGAGTTTGTGCATT 1222
Query 1100 ACT-CCAGAGGCCACT-CACTAGCTCTCAAAGTATTGGGTGGAGATC-TTAAGAAGCAAA 1156
| | | |||||||| | |||||||||||||| |||||||| |||| | ||| | || |||
Sbjct 1223 A-TGCTAGAGGCCA-TCCACTAGCTCTCAAAATATTGGGTAGAGAGCTTTATG-AGAAAA 1279
Query 1157 ATATAG-ATTATT-GGAATGAC-AAACTGA-AGACACTCACACAAAGTCCCATCC-C--- 1208
|||| | | ||| |||| || ||||||| | | ||| | |||||||||| || |
Sbjct 1280 ATAT-GAAGCATTGGGAA--ACAAAACTGATA-ATACTTGCTCAAAGTCCCA-CCACTTA 1334
Query 1209 ---TCGACG-CGTC-TTCAAAGTAAGTTATGATGAATTGAGTTCAGAGCAAAAAGATGCA 1263
| || | ||| | | |||||||||||||||||||||||| | ||| |||||||||
Sbjct 1335 TATTGGA-GAAGTCGTGC-AAGTAAGTTATGATGAATTGAGTTTGGCGCAGAAAGATGCA 1392
Query 1264 TTTCTAGACATAGCCTGCTTCAGATCGCATGATGTAGAATATATAGAAAGTCTATTGGCT 1323
||||| |||||||| || |||||||| || ||||| || ||| |||||||| || ||| |
Sbjct 1393 TTTCTCGACATAGCTTGTTTCAGATCACAGGATGTGGATTATGTAGAAAGTTTACTGGTT 1452
Query 1324 TCATCT-A--C--G----G--G-AGCAGTAGAAGCCCTTTC-CG-ATATGTGCCTGATTA 1369
|| ||| | | | | | |||| || ||| || || | ||| || | |||||
Sbjct 1453 TCGTCTGACCCTGGATCTGCTGAAGCAATAAAAG--CTCTCAAGAATAAGTTCTTGATTG 1510
Query 1370 ATACTTGTGACGGTCGAGTGGAGATGCATGATCTTCTGTATA-CTTTGTCAAGGGAACTT 1428
|||| |||||||| || ||||||||||||||||| ||||||| ||| || |||||||||
Sbjct 1511 ATACATGTGACGGCCGTGTGGAGATGCATGATCTACTGTATAGATTT-TCTAGGGAACTT 1569
Query 1429 GATCCTAAAGCATCCACTCAAATTGGTGGTAGCAAACAACGGAGGCTGTGGCTCCATCAA 1488
|||| |||||||||||||| || ||||||||||||||||| ||| | ||| | | |
Sbjct 1570 GATCTTAAAGCATCCACTC-AA--GGTGGTAGCAAACAACGAAGGTTATGGGT-C--C-- 1621
Query 1489 GACATTATCAAGGAAGGCACAATTAATGTTCTGAAGAATAA-ACTGGTGAGACCT--AAG 1545
| |||| | | || ||||||||| | | |||| || | ||| ||| || ||
Sbjct 1622 G------TCAA-G-A--CATAATTAATGTACAGCAGAA-AACAATGG-GAG--CTGCAA- 1666
Query 1546 GATGTGAGAGGAATTTTCCTAGACTTGTCTGAAGTGGAAGG-CGAAATATGCTTAGATTG 1604
|||| ||||| ||||||||||| ||||||||||| ||||| |||| | ||||||| |
Sbjct 1667 -ATGTTAGAGGTATTTTCCTAGATTTGTCTGAAGT-GAAGGTTGAAACAAGCTTAGACCG 1724
Query 1605 CGACCACTTCGAAG-ATATGTGTAATCTTCGGTACCTCAAGTTCTACAATTCTCATTGTC 1663
|| |||||| ||| ||||| | ||||| ||||| |||||||| |||||||| ||||| |
Sbjct 1725 TGAACACTTC-AAGAATATGCGCAATCTCCGGTATCTCAAGTTATACAATTCACATTG-C 1782
Query 1664 CC-CAGGAATGTAAAACTACCAATAAGATAAACACCCCTGAAGGAGTTAAGTTACCATTG 1722
|| || |||||| ||| | ||||||||||||| ||||| ||| || || ||||||||
Sbjct 1783 CCTCACGAATGTCTAACCAATAATAAGATAAACATGCCTGATGGACTTGAGCTACCATTG 1842
Query 1723 AAAAAGGTTCGATGCCTCCACTGGCTAG-AATTCCCGTTGGAAGAATTTCCAAACGATTT 1781
||| ||||||||||||| |||||||| | ||||||| || || ||| |||||||||||||
Sbjct 1843 AAAGAGGTTCGATGCCTTCACTGGCT-GAAATTCCCATTAGAGGAACTTCCAAACGATTT 1901
Query 1782 TGACCCGATTAATCTCGTTGACCTTAAGCTGCC-TCGCAGCAAGATTAAACAACTCTGGG 1840
|||||||||||||||||| |||||||||||||| | ||| ||||| ||| ||| ||||
Sbjct 1902 TGACCCGATTAATCTCGTCGACCTTAAGCTGCCATA-CAGTGAGATTGAACGACTTTGGG 1960
Query 1841 AGGGTGACAAGGATACACCATTCTTAAAGTGGGTCGATCTCCAGCACTCAAGTAAGTTGT 1900
| |||| |||||||||||| ||||||| |||||||||||| | ||||||||||||||||
Sbjct 1961 ATGGTGTTAAGGATACACCAGTCTTAAAATGGGTCGATCTCAATCACTCAAGTAAGTTGT 2020
Query 1901 GCAGCTTGTCAGGGTTATTAAAGGCTGAAAAGCTTCAAAGATTGAACCTTGAAGGTTGCA 1960
||||||||||||| |||| ||||||| |||| ||||||||| ||||||||||||| ||||
Sbjct 2021 GCAGCTTGTCAGGATTATCAAAGGCTCAAAATCTTCAAAGACTGAACCTTGAAGGGTGCA 2080
Query 1961 CAA 1963
|||
Sbjct 2081 CAA 2083
> AT2G17060.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr2:7422411-7426877 FORWARD LENGTH=3588
Length=3588
Score = 150 bits (81), Expect = 7e-35
Identities = 268/354 (76%), Gaps = 30/354 (8%)
Strand=Plus/Plus
Query 2452 ATCAGTCACCTTTCTCAACTAAAATGGC-TGAACCTGAAGTATTGTACGAAGCTTACATC 2510
||||| || |||| ||| || ||||||| || || ||||| |||| | |||||||| |||
Sbjct 2716 ATCAGCCAGCTTTATCATCTGAAATGGCTTG-ACTTGAAGAATTGCAAGAAGCTTAAATC 2774
Query 2511 TGT-TCCAGAGTTTCCACCAAATCTTC-AGTGCTTAGATGCACACGGCTGTAG-TTTGCT 2567
||| | | | | |||||||||| | || |||||||||||||||| || ||| | | ||
Sbjct 2775 TGTGT-CGGTGCTTCCACCAAA-CCTCAAGTGCTTAGATGCACATGGTTGT-GACTCACT 2831
Query 2568 -GAAGACAGTTTCAAAG-CCTTTGGCCCG-TATCATGCCAAC-CGAACAGAAT-CATTCC 2622
||||| || || ||| ||| | | | | | ||||| || ||| | ||| |||| |
Sbjct 2832 GGAAGA-AG-TTGGAAGCCCTCTAG-CGGTTCTCATGGTGACAGGAA-A-AATCCATTGC 2886
Query 2623 ACATTCATTTTCACCAACTGTC-AGAACCTGGAACAAGCTGCA-AAGGAGGAA-ATCACA 2679
|||| ||||||||| ||||| | | || |||| |||| |||| || || || |||| |
Sbjct 2887 ACATACATTTTCACAAACTG-CAACAAATTGGATCAAGTTGCAGAA--AGTAACATCATA 2943
Query 2680 TCGTAT-GCTCAAAGGAAATGCCAGCTGTTATCATATGTTCGT-AAACGCTACAATGGGG 2737
|| | | || |||||| ||||| || | ||| ||| || | || |||||||||||||
Sbjct 2944 TC-TTTCACTTGGAGGAAAAGCCAGATGATGTCAGATGCTC-TGAATCGCTACAATGGGG 3001
Query 2738 G-TCTTGTTTCAGAGTCTTTGTTCAGCACTTGCTTTCCTGGATGTGAAGTGCCT 2790
| | |||||| || |||||| |||||||||||||||||||||||||||| |||
Sbjct 3002 GAT-TTGTTTTGGAATCTTTGGTCAGCACTTGCTTTCCTGGATGTGAAGTACCT 3054
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 169915435941
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5