BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg915611 Length=2136 Score E Sequences producing significant alignments: (Bits) Value AT5G45210.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 870 0.0 > AT5G45210.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:18295521-18298434 FORWARD LENGTH=2094 Length=2094 Score = 870 bits (471), Expect = 0.0 Identities = 1051/1320 (80%), Gaps = 84/1320 (6%) Strand=Plus/Plus Query 802 GAGAA-AAGAGTTCTTGTTGTTCTTGATGATGTGCGCAATCC-AATGGA-TGCTGAGTCT 858 ||||| || ||||||| |||||||||||||||||||||| || ||||| | | |||||| Sbjct 796 GAGAAGAA-AGTTCTTTTTGTTCTTGATGATGTGCGCAA-CCTGATGGATTTC-GAGTCT 852 Query 859 TTCCTAGGAGGATTTGATCATTGTTTTGGTCCC-GAAAGTTTAATGATCATATCATCCCG 917 ||||| |||||| |||| | | || | ||| | |||| |||| ||| || ||||| | Sbjct 853 TTCCTTGGAGGAATTGA--A-GGGGTTAG-CCCTGGAAGTGTAATAATCCTAACATCCAG 908 Query 918 AGATAAACAAGTTCTTCATCAGTGTCAGGTTGATAG-TGT-TTACG-AGATACCG-GCTT 973 |||||||||||||||||||||||| ||||| || | ||| || || || | ||| | | Sbjct 909 AGATAAACAAGTTCTTCATCAGTGCCAGGTCGA-GGATGTATT-CGAAG-TTCCGAG-TC 964 Query 974 TAAAC-AAGAAGGAGGCTCAACGGTTATTCACCCGGTTTGCATTTTCAGAAA-AAGAACC 1031 | ||| | ||| || ||| |||||||||| ||||| || || || ||| ||| || Sbjct 965 TGAACGAGGAA-GAAGCTGTACGGTTATTCGCCCGGACCGC-GTTCCATAAAGAAGGGCC 1022 Query 1032 AAGTGATACT-AATCTTATAGAAGTGTCAAAGAAGGTCG-TTGAGTATGCTGATGGAAAT 1089 ||||||| || ||| | || || || ||||||||||| | | || ||||||| ||||||| Sbjct 1023 AAGTGATGCTAAAT-TAATGGACGTATCAAAGAAGGTTGCTAGA-TATGCTGGTGGAAAT 1080 Query 1090 CCTTTA-GCTCTCTGTC-ACTATGGCAGAGAGCTGG-G--GAAGAAGAAACCGGAAGAAG 1144 || | | ||||| || | |||||| |||||||||| | ||| ||||| ||||||||| Sbjct 1081 CC-TAAGGCTCTATG-CTTCTATGGGAGAGAGCTGGAGAAGAAAAAGAAGCCGGAAGAAA 1138 Query 1145 TGGTGGCGGAATTCGAGAAGATTAAGCAATCTCCTCCGCGGGAGATTA-TGCATGTGT-T 1202 ||| || ||| || |||||||| | ||||| ||| || | || | || | || || | | Sbjct 1139 TGGAGGAGGAGTTTGAGAAGATGAGGCAATGTCCCCCCCAAGA-AATACT-CA-GTTTAT 1195 Query 1203 TAAG-AGCAGCTATGATG-AGCTCAGCGAAAATGAGAGGAGCATATTCTTAGACATTGCT 1260 | || ||||||||||||| | || | ||| |||||||| || |||||||| |||||||| Sbjct 1196 TCAGAAGCAGCTATGATGCA-CTTAACGACAATGAGAGAAGTATATTCTTGGACATTGCG 1254 Query 1261 TTTTTCTTTAACGGTGAAAACC-T-CGATTATGTCATGCGTATACTTGAAGGGTGTGGTT 1318 | ||||||||| |||| |||| | || |||| ||||| ||||||||||||||||| | Sbjct 1255 TGTTTCTTTAATGGTG--AACCGTGTGACGATGTAATGCGAATACTTGAAGGGTGTGGGT 1312 Query 1319 TCTTCCCACACGTTGGTATTGACCGTCTTG-TAGAACGGTCTTTATTGATGATATCAAA- 1376 |||| ||||||||||| ||||||||||||| | || |||||| || ||| ||| ||||| Sbjct 1313 TCTTTCCACACGTTGGGATTGACCGTCTTGCT-GAGCGGTCTCTACTGACGATCTCAAAG 1371 Query 1377 GAACAACAA-TGTTGAGATGCAA-ATTTTGATTCAGGATATTGCTCG-GAATATCGTCAA 1433 ||| || || || ||||||||| |||| ||||| ||| ||| || |||| || |||| Sbjct 1372 GAA-AA-AAGAGTGGAGATGCAAGGTTTT-ATTCAAGATGCTGCCCGTGAAT-TCATCAA 1427 Query 1434 TGAAGaaaaaaaTCAAATCACAAGGCATCGCAGATTGTGGGATCCTTCAATCATTAAATC 1493 || | | | | |||| ||||||| ||||| || |||| || | || Sbjct 1428 -CCAG------A-C---T-TCGAGGCGTCGCAGACACTGGGAACCATCAAGAATCAGATT 1475 Query 1494 ATTTCTAGAAGAA-AATAAACCTAAGGGGACTGAAGTTATTGAAGGAATTTTTCTAGACA 1552 ||| |||||| || ||||| ||||||||| ||||||||||||||| |||||||| |||| Sbjct 1476 ATTACTAGAA-AATGATAAATCTAAGGGGAATGAAGTTATTGAAGGGATTTTTCTTGACA 1534 Query 1553 CAACAAAATTAACCGTTGATGTTAATCCTAAGGCCTTTGAGAATATGTATAATCTTAGAC 1612 |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 1535 CAACAAAATTAACCTTTGATGTTAATCCTATGGCGTTTGAGAATATGTATAATCTTAGAC 1594 Query 1613 TATTGAAGATCTACAGTTCAAACTCTGAAAGTACTCAAGAA-TTCCATCTTCCCAAGGGA 1671 | ||||||||||| ||| || |||| |||| | |||||||| || | |||| | |||| | Sbjct 1595 TGTTGAAGATCTATAGTACACACTCCGAAACTGCTCAAGAACTT-CGTCTTACTAAGGAA 1653 Query 1672 CTCCGCTCTTTGCCTTATGAGCTCAGGCTACTTCATTGGGAAAAGTATCCGTTGCGATCG 1731 || ||||||||||||||||||||||||||||| || ||||| ||||||||||||| |||| Sbjct 1654 CTTCGCTCTTTGCCTTATGAGCTCAGGCTACTCCACTGGGAGAAGTATCCGTTGCAATCG 1713 Query 1732 TTTCCTGAAGACTTTGATC-CTAGACACCTTGTTGAACTCAATATGCCTTATAGTCATCT 1790 || ||| |||| ||||| | || | |||||||||||||||||||||||||||||||| || Sbjct 1714 TTGCCTCAAGATTTTGA-CACTCGGCACCTTGTTGAACTCAATATGCCTTATAGTCAGCT 1772 Query 1791 TCAGAA-TCTCTGGGAAGGAACCAAGAGTTTGGTGAAGTTGAAGATAATAAATCTTAGCC 1849 ||| || |||||| | ||||| ||||| | | || || ||||| ||||||||||||| Sbjct 1773 TCA-AAGTCTCTGTGTTGGAACTAAGAGCCTAGCCAAATTAAAGATGATAAATCTTAGCC 1831 Query 1850 ATTCTCAGCAACTAGTTGAAGTTGATGTACTTTTGAAAGCTTGTAGTCTTGAGCAAATCC 1909 | |||||| ||||| |||||||||| | ||| |||||| |||| ||||||| |||| Sbjct 1832 ACTCTCAGAAACTACTTGAAGTTGACGAACTCGCGAAAGCGTGTAATCTTGAGAAAATAG 1891 Query 1910 ATCTTCAAGGTTGCACAAGCTTGGAGAGCATCCCACACATTGATCAGCTAGAGAATCTTC 1969 ||||||||||||| ||||||||| ||||||||||||||| |||| |||| ||||||||| Sbjct 1892 ATCTTCAAGGTTGTACAAGCTTGAAGAGCATCCCACACACGGATCGGCTAAAGAATCTTC 1951 Query 1970 AACTTCTGAATCTTTCTGGTTGCACGAG-ACTCAAACGTAAAGAGATTCTAGAGGAA-AT 2027 || |||||||||| |||||||||||||| | ||||||||| ||| | || || || || Sbjct 1952 AATTTCTGAATCTATCTGGTTGCACGAGTA-TCAAACGTACGGAGGCTATAAAG-AAGAT 2009 Query 2028 aaaaa-aaCTTGA-TCCAGAAGGCGGGTTAAGAGAAACAAAATTTGAATCATTGGTGTTC 2085 |||| || | || || ||||||| | ||||||||||| | |||||||||| |||||||| Sbjct 2010 AAAAGGAA-T-GAATCAAGAAGGCTGCTTAAGAGAAACTACATTTGAATCAATGGTGTTC 2067 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 105923149950 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5