BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg915655 Length=1173 Score E Sequences producing significant alignments: (Bits) Value AT5G45080.1 | Symbols: AtPP2-A6, PP2-A6 | phloem protein 2-A6 |... 1513 0.0 > AT5G45080.1 | Symbols: AtPP2-A6, PP2-A6 | phloem protein 2-A6 | chr5:18191575-18193207 REVERSE LENGTH=1179 Length=1179 Score = 1513 bits (819), Expect = 0.0 Identities = 1069/1188 (90%), Gaps = 24/1188 (2%) Strand=Plus/Plus Query 1 ATGGCTTCTTCTTCCTCGGTTGTGAAACCCACCCCAACGGGGCCTCAAGTGTTCATATGC 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ATGGCTTCTTCTTCCTCGGTTGTGAAACCCACCCCAACGGGGCCTCAGGTGTTCATATGC 60 Query 61 TTCCGGGGAGCAGATGTCCG-ATCACACTTCATAAGCTATCTTGACCCTGCTTTGAGAGA 119 |||||||||||||||||||| | |||||||||||||| ||||| |||||| |||||||| Sbjct 61 TTCCGGGGAGCAGATGTCCGCA-AACACTTCATAAGCTTTCTTGTCCCTGCCTTGAGAGA 119 Query 120 AGCGAATATAAACGTCTTCATAGATGATG-ACGAGCTTTTGGGCTCAGATTTGGTTCACC 178 |||||| |||||||||||||||||||| | ||||| ||||||||||||| ||| | ||| Sbjct 120 AGCGAACATAAACGTCTTCATAGATGA-GAACGAGTTTTTGGGCTCAGAAATGGCTAACC 178 Query 179 TATTGAAGAGGATAGAAGAGTCGGAGATCGCGCTAGTGATCTTTTCGGAGGATTTCACAA 238 |||||| |||||| |||||||| ||| ||||||||||||| ||||| | ||||||||||| Sbjct 179 TATTGACGAGGATTGAAGAGTCTGAGCTCGCGCTAGTGATATTTTCCGTGGATTTCACAA 238 Query 239 GTTCGTATTGGTGCTTGGAGGAGCTGGCAAAGATCAAGGAATGCAAGGATCAAGGCCGTC 298 | ||| || |||||||| | |||||||| |||||||||||| |||||||||||||||||| Sbjct 239 GATCGCATAGGTGCTTGAATGAGCTGGCCAAGATCAAGGAACGCAAGGATCAAGGCCGTC 298 Query 299 TCAAAGTGATTCCCATCTTCTACAAAGTTAAACCTTCCGTC-GTGAAATATC-TGAAAGG 356 ||| ||||||||||||||||||||||||||||||||||| | || |||| || || |||| Sbjct 299 TCATAGTGATTCCCATCTTCTACAAAGTTAAACCTTCCG-CTGTAAAATTTCTTG-AAGG 356 Query 357 AAAGTTTGGCGATCATTTCAGGGATC-AAATACGCAATCTTAGACACCA-GCCAGAAAGA 414 ||| ||||||||| ||||||||| || | ||||||| | |||| || || | || | Sbjct 357 AAAATTTGGCGATAATTTCAGGGCTCTGGA-ACGCAATAATCGACA-CATGCTACCAATA 414 Query 415 ACTCAGAAATGGGAGGACGCTTTATTGTCTATTCCTGAATCAATAGGCATGCCTTTAGCA 474 |||||||||||| |||| || ||| |||||| || | ||||||||||||||| || || Sbjct 415 ACTCAGAAATGGAAGGAAGCATTAGAGTCTATCCCGGGATCAATAGGCATGCCCTTGGCT 474 Query 475 GCCCAAAGTGAGAAGACCGATAAAGACTTCATAACCTCAATGGTCATCAAGATTCAAAAA 534 | |||||||||| ||||||||| |||||||||| |||||||||||||||||||||| || Sbjct 475 GAACAAAGTGAGAGGACCGATAATGACTTCATAAACTCAATGGTCATCAAGATTCAACAA 534 Query 535 TCACTGGATTATATGGCTGTGAGAAG-----A-GAAATAGAAGCG-AATCGTCAAGGAGT 587 | |||||| |||||||||||||||| | |||||||||||| || ||| || ||| Sbjct 535 TTACTGGAGAATATGGCTGTGAGAAGAAACAATGAAATAGAAGCGCAA-CGTAAATTAGT 593 Query 588 TTCCATCATCCCTGCAAGGAAACCAAAAGCAGAAGCGAATCCTCAAGGAGGTTCCATGGT 647 ||||||| ||||| ||| |||||| |||| |||||||||||||||||||||||||||||| Sbjct 594 TTCCATCGTCCCTCCAAAGAAACCGAAAGGAGAAGCGAATCCTCAAGGAGGTTCCATGGT 653 Query 648 CCCTGCAAGGGAGCAAGAAAGAGAAGCGAGTCATCAAGGAGGTTCCCTGGTCCCGTCCAT 707 |||||||||| ||| |||||||||||||||||| ||||| ||||| ||||||| ||||| Sbjct 654 CCCTGCAAGGAAGCCAGAAAGAGAAGCGAGTCAGGAAGGAAGTTCCGTGGTCCCTTCCAT 713 Query 708 GGTCCTTGCAAAGGATTTAGTA-ATCACTCATTTTGATAAACCTCAAGTATGGACTTGGA 766 ||||| ||||| |||||||| | ||||| |||| ||| ||||||||| ||||||||||| Sbjct 714 GGTCCCTGCAAGGGATTTAG-ACATCACACATTCTGAGAAACCTCAAAAATGGACTTGGA 772 Query 767 GTACTATCAACGAGGCACCAAACTCTGCGGAAATTGAAATTGCGACGTCGAATAAACTTT 826 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 773 GTACCATCAACGAGGCACCAAACTCTGCGGAAATTGAAATTGCGACGTTGAATAAAGTTT 832 Query 827 ACTGGCTTAAAATAGTGGGAACAATAACTACGGAGAATCTAACACCAGGAACTAAGTACG 886 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 833 ACTGGCTTAAAATAGTGGGAACAATAACTACGGAGAATCTAACACCAGGAGCTAAGTACG 892 Query 887 AGGCTGTATTCGTAGTGAAATTAGAAAATAATGCTAGTGGATGGGAG-ATACCAGTGACT 945 |||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| | Sbjct 893 AGGCTGTATTCGTAGTCAAATTAGAAAATAATGCTAGTGGATGGGAGCA-ACCAGTGAAT 951 Query 946 CTAAAGCTGAAGGTGGTACAACACGATGGGGACGATGATCGGGTGGATCGAACAGAGAAC 1005 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 952 CTAAAGCTGAAGGTGGTACAACACGATGGGGACGACGATCGGGTGGATCGAACAGAGAAC 1011 Query 1006 TTGAACGATTACATAGGCCAGAACTGGGTGGATATTTTGGCCGGAGTTTTCGTGGTTCCG 1065 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1012 TTGAACGATTACATAGGCCAGAACTGGGTGGATATTTTGGCCGGAGTTTTCGTGGTTCCG 1071 Query 1066 CCAAAAACCACTCCCGCAACGATCATTTGCACCATGTATCAGTACGCGGACGAGTATAAG 1125 |||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||| Sbjct 1072 CCAAAAACTACTCCCGCAACGATCATTTTCACCATGTATCAGTACGAAGACAAGTATAAG 1131 Query 1126 AAAAAGGGACTCGTCGTCAAAGGTCTTGCAATACGTCCCACGAACTAA 1173 |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1132 AAAAAGGGACTCGTCGTCAAAGGTGTTGCAATACGTCCCACGAACTAA 1179 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57580025115 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5