BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915658
Length=3399
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45050.1 | Symbols: TTR1, ATWRKY16, WRKY16 | Disease resista... 2222 0.0
AT5G45260.1 | Symbols: RRS1, ATWRKY52, SLH1 | Disease resistanc... 2041 0.0
AT4G19520.1 | Symbols: | disease resistance protein (TIR-NBS-L... 135 2e-30
> AT5G45050.1 | Symbols: TTR1, ATWRKY16, WRKY16 | Disease resistance
protein (TIR-NBS-LRR class) | chr5:18176914-18181805 REVERSE
LENGTH=4221
Length=4221
Score = 2222 bits (1203), Expect = 0.0
Identities = 2145/2590 (83%), Gaps = 103/2590 (4%)
Strand=Plus/Plus
Query 1 ATGACCGAGAGTGAGCAAATCGTCTACATCAGCTGCGTAAAACAGGTACGATACTCCTTC 60
|||||||||||||||||||||||||||||||||||| || | |||||||||||||||||
Sbjct 1 ATGACCGAGAGTGAGCAAATCGTCTACATCAGCTGCATAGAGGAGGTACGATACTCCTTC 60
Query 61 GTCAGCCACCTCTCCGAAGCTCTCC-GCCGGAAAGGCATAATCGATGTGTTCATCGATAC 119
||||||||||||||| ||||||||| || | ||||| ||| |||||| ||||||||||
Sbjct 61 GTCAGCCACCTCTCCAAAGCTCTCCAGC-GAAAAGGTGTAAACGATGTCTTCATCGATAG 119
Query 120 CGACGATTTTCTTTCCAACGAGTCTCAATCAAAGGTCGAGAGAGCTAGGGTTTCTGTGGT 179
||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 120 CGATGATTCGCTTTCCAACGAGTCTCAATCAATGGTCGAGAGAGCTAGGGTTTCTGTTAT 179
Query 180 GGTTTTATCAGGGAACTC-TACATTTTGC-CTTGACAAGCTCGTGAATGTTCTCGGGTGC 237
| ||||| |||| ||| | ||| | | | ||||||||||||||||| ||||||| |||
Sbjct 180 GATTTTACCAGGAAAC-CGTACGGTAT-CTCTTGACAAGCTCGTGAAGGTTCTCGATTGC 237
Query 238 CAGAGGAACATCGACCAGGTGGTGGTTCCAGTGTTGTACGGTG--AGATTCCATTACAGG 295
|||| ||||| || || ||||||||||| ||||||||||||| |||| | || | ||
Sbjct 238 CAGAAGAACAAAGATCAAGTGGTGGTTCCGGTGTTGTACGGTGTCAGAT-C-ATCAGAGA 295
Query 296 TCGAATGGGATAAG-GCACTGGATTCGAGGGGCTTATCATCAGTCCACCAGTCCAGGAAT 354
||||||| || | || |||||||||| || || |||||||| ||||| ||||||||
Sbjct 296 CCGAATGGCTTA-GCGCGCTGGATTCGAAAGGATTCTCATCAGTACACCATTCCAGGAA- 353
Query 355 A-AATGCACCGACTCCGAACTTGTAGAAGAGATTACGAGAGATGTATATGAGAAGCTCTT 413
| |||| | |||||| | |||||| |||||| | |||||||| ||||||||||||||
Sbjct 354 AGAATGTAGTGACTCCCAGCTTGTAAAAGAGACTGTTAGAGATGTGTATGAGAAGCTCTT 413
Query 414 CTATATGGAAGGAATTGGAATCTACTCGAAACGGCTGGAGATAGA-AAACATAGTTTG-C 471
||||||||| |||||||||| || ||||| | ||||||||| || ||| || | || |
Sbjct 414 TTATATGGAACGAATTGGAATATATTCGAAGCTGCTGGAGATTGAGAAA-AT-GATTAAC 471
Query 472 AAGCAACCATTTGG-CGTCCGCTGTGTTGGAATTTGGGGTATGCCTGGAATAGGCAAGAC 530
|||||||| || || | |||| |||||||||||||||||||||||||| |||||||||||
Sbjct 472 AAGCAACCGTT-GGACATCCGTTGTGTTGGAATTTGGGGTATGCCTGGCATAGGCAAGAC 530
Query 531 GACACTTGCTAAAGCAGTCTTTGACCAAATGTCTGGCGAATTTGATGCTTC-TTGTTTTA 589
||||||||||||||||||||||||||||||||||| || ||||||||| | ||| ||||
Sbjct 531 TACACTTGCTAAAGCAGTCTTTGACCAAATGTCTGGTGAGTTTGATGCT-CATTGCTTTA 589
Query 590 TCGAAGACTTTGAC-AAAGTTATTCACGAGAAGGGCCTTTATCGTTTGCTGGAGGAACAC 648
| ||||||| || |||| |||||| |||||||| ||||| ||||||||||||||||
Sbjct 590 TTGAAGACTAC-ACCAAAGCTATTCAAGAGAAGGGTGTTTATTGTTTGCTGGAGGAACAG 648
Query 649 TTTTTAAAAGAGAA-GCCTGGTACTGACAG-TACCACAACGAAACTGAGCTTGCTTAGAA 706
||||| ||||| || || |||| || | | |||| |||||| |||||||||||||
Sbjct 649 TTTTTGAAAGAAAATGC-TGGTGCT-AGTGGTACCGTTACGAAATTGAGCTTGCTTAGGG 706
Query 707 ACAAATTAAACAATCAGAGGGTTCTTGTTGTTCTTGATGACCTGCGCAATCCTTTGATTG 766
| | |||||||||| ||||||||||||||||||||||||| | |||| |||| || |||
Sbjct 707 ATAGATTAAACAATAAGAGGGTTCTTGTTGTTCTTGATGATGTCCGCAGTCCTCTGGTTG 766
Query 767 CAGAGCCTTTACTGGGAGGGTTTGACTGGCTAGGACCCGAAAGCCTGATCATCATAACCT 826
||| |||| || ||||||||||||||| | || ||| |||| || |||||||||||||
Sbjct 767 TGGAGTCTTTTCTTGGAGGGTTTGACTGGTTTGGTCCCAAAAGTCTAATCATCATAACCT 826
Query 827 CTAGAGATAAA-CAGGTGCTTCGTCTTTGCCGAGTCAATCAAATATATGAGGTGCAGGGT 885
| | ||||||| | |||| |||| ||||| ||||||||||||||||| ||||| ||||||
Sbjct 827 CCAAAGATAAATC-GGTGTTTCGCCTTTGTCGAGTCAATCAAATATACGAGGTTCAGGGT 885
Query 886 TTAAACAAAAAAGAGGCTCTTCAACTCTTCT-TGCGGTCTGCGTCTATTA-A-GAATAAG 942
||||| | |||||||||||||||||||||| | | | ||||||||| | | || || |
Sbjct 886 TTAAATGAGAAAGAGGCTCTTCAACTCTTCTCTTTG-TGTGCGTCTAT-AGACGA-TATG 942
Query 943 GGAGAGCAGAATCTCAAGGAGCTGTCAATGAAGGTGATTGAATATGCAAATGGAAACCCA 1002
| ||||||||||||| | ||| |||||||||| || ||| ||||||| ||||| | |||
Sbjct 943 GCAGAGCAGAATCTCCACGAGGTGTCAATGAAAGTTATTAAATATGCTAATGGCCATCCA 1002
Query 1003 TTAGCTCTCAGTATTTATGGCAGAGAGCTTAAAGGTAAGAAAC-ACTTATCAGAAATGGA 1061
|||||||||| | | ||||||||||| || | || |||||| || | ||||||||||
Sbjct 1003 TTAGCTCTCAATCTCTATGGCAGAGAACTGATGGGGAAGAAAAGACC-ACCAGAAATGGA 1061
Query 1062 GACCA-CATTCCTCAAACTCAAGGGACATCCTCCCTTTAAGATTGTTGATGCATTCAAGA 1120
|| | |||||||||||||||||| | |||||| || ||||||||||| ||||||
Sbjct 1062 GAT-AGCATTCCTCAAACTCAAGGAATGTCCTCCAGCTATTTTTGTTGATGCAATCAAGA 1120
Query 1121 GCA-GCTATGA-ATCACTCAATGACAGGGaaaaaaaCATATTTCTCGACATAGCTTGTTT 1178
|| | ||||| | ||||||||||||||||||||||||| ||| | ||||||||||||||
Sbjct 1121 GCTCG-TATGACA-CACTCAATGACAGGGAAAAAAACATTTTTTTGGACATAGCTTGTTT 1178
Query 1179 TTTCGAGGGAGAAAATGTCGACTACGTGATGCAACTGCTCGAGGGCTGTGGTTTCCTTCC 1238
||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||
Sbjct 1179 CTTCCAGGGAGAAAATGTTGACTACGTGATGCAACTGCTTGAGGGTTGTGGTTTCTTTCC 1238
Query 1239 ACATGTTGGAATTGATGTTCTTGTTGAGAAGTGTCTGGTTACTATTTCAGAAAACCGTGT 1298
|||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||
Sbjct 1239 ACATGTTGGAATTGATGTTCTTGTGGAGAAGAGTCTGGTGACTATTTCAGAAAACCGAGT 1298
Query 1299 GTGGATGCATAATTTGATTCAGGACGTTGGCCGAGAAATAATAAATAAAGAAACA-GTAC 1357
| |||||||||| ||||| || || ||||||||| |||||||||||| ||||||| | ||
Sbjct 1299 GCGGATGCATAACTTGATCCAAGATGTTGGCCGACAAATAATAAATAGAGAAACAAG-AC 1357
Query 1358 AGA-TAGAGAGGCGCAGCAGACTGTGGAAACCTGGGAACATCAAATATTTATTAGAAGAT 1416
||| || |||||||||||||||||||| ||||| | | ||||||||||||||||||||||
Sbjct 1358 AGACTA-AGAGGCGCAGCAGACTGTGGGAACCTTGCAGCATCAAATATTTATTAGAAGAT 1416
Query 1417 AACAGAGGAAAAGAAGAAAATGGAGACCCCAAAACAACTTCCAAACGTGCTAAGGGCC-T 1475
|| || |||| ||||||| ||| | |||||||||| |||||||| ||| || |
Sbjct 1417 AAG-GAACAAAAC--GAAAATGAAGAACAAAAAACAACTTTTGAACGTGCTCAGGTCCCT 1473
Query 1476 GGAACAGATCGAAGGCATATTTCTTGACACATCAAACATAAGTTTTGATGCCGAGCCT-T 1534
| || ||||||||||||| ||||| |||||||||||| ||||||||||| ||| | |
Sbjct 1474 G-AAGAGATCGAAGGCATGTTTCTGGACACATCAAACTTAAGTTTTGATATTAAGCATGT 1532
Query 1535 CTGCCTTTGAGAATATGCTGAACCTTAGATTGCTT-AAGATTTACAGTTCCGATCCTGAA 1593
||||||||| |||||| |||||||||||||| || ||||||||||||||| ||||||||
Sbjct 1533 -TGCCTTTGATAATATGTTGAACCTTAGATTG-TTCAAGATTTACAGTTCCAATCCTGAA 1590
Query 1594 ATCTATCCTGTAATCAATTTCC-CTAATGGCTCTCTCCGTTATCTTCCTAACGAGCTGAG 1652
|| ||| ||||| |||||||| | || ||||||||| ||| ||||||||| | ||| ||
Sbjct 1591 GTCCATCATGTAAACAATTTCCTCAAA-GGCTCTCTCAGTTCTCTTCCTAATGTGCTAAG 1649
Query 1653 ACTCCTTCATTGGGACAACTATCCCCTGAAATCTT-TGCCTCAAAATTTTGATCCTA-AG 1710
|||||| |||||||| |||||||| ||| | | || ||||||||||||||||||||| |
Sbjct 1650 ACTCCTGCATTGGGAGAACTATCCTCTGCAGT-TTCTGCCTCAAAATTTTGATCCTATA- 1707
Query 1711 CACCTTGTTGAAATCAACATGCCCAACAGTCAACTTCAGAAACTTTGGGGTAAAACCAAG 1770
||||||||||||||||||||||| |||| |||||| |||||||||||||| |||||||
Sbjct 1708 CACCTTGTTGAAATCAACATGCCGTACAGCCAACTTAAGAAACTTTGGGGTGGAACCAAG 1767
Query 1771 AACCTGGAGATGTTGAAGACAGTTAGACTGTGTCATTCCCAGCAACTAGTTGATATC-AG 1829
|||||||||||||||||||| | || || ||||||||||| |||||||||||||| |
Sbjct 1768 GACCTGGAGATGTTGAAGACAATCAGGCTTTGTCATTCCCAACAACTAGTTGATATTGA- 1826
Query 1830 CGATCTTTGGGAAGCTCCACATCTTGAGGTAATTGATCTCCAGGGTTGTACAAGGCTTCA 1889
|||||||| |||||| | ||||||||||| |||||||||| || |||||||| || ||
Sbjct 1827 CGATCTTTTAAAAGCTCAAAATCTTGAGGTAGTTGATCTCCAAGGCTGTACAAGACTGCA 1886
Query 1890 GAGTTTCCCAAACACAGGTCAATTCCTGCATCTACGAGTTTTAAATCTCTC-GCATTGCA 1948
|||||||||| ||| |||||||| || ||| |||||||| |||||||||| | |||||
Sbjct 1887 GAGTTTCCCAGCCACCGGTCAATTGCTACATTTACGAGTTGTAAATCTCTCAGG-TTGCA 1945
Query 1949 TAGAGATaaaaaaaaTTCCG-GAGGTTCCACCAAATATTAAGAAATTGCATCTCCAGGGA 2007
|||||| |||| |||| || |||| ||||||||| ||| | || |||| |||||
Sbjct 1946 CAGAGATCAAAAGT-TTCCCAGAAATTCCCCCAAATATTGAGACACTGAATCTACAGGGG 2004
Query 2008 ACTGGCATAATAGCATTACCACTTTCCACTACTTTTGAGCCAAACCACACAAAGCTTTTA 2067
||||| ||||||| |||||||||||||| | | || |||||||| ||| | |||||||
Sbjct 2005 ACTGGTATAATAGAATTACCACTTTCCA-T--TGTTAAGCCAAACTACAGAGAGCTTTTG 2061
Query 2068 AATTTTCTAACAGAAAATCCAGG-TCTTTCAAATGCCTTGAAAC-TTGAGC---GT--T- 2119
||| ||||| | |||| ||| || ||||||| || || |||| |||||| || |
Sbjct 2062 AATCTTCTAGCTGAAA-TCCCGGGTCTTTCAGGTGTCTC-AAACCTTGAGCAAAGTGATC 2119
Query 2120 TGAGAAGTCTT---C-----TGAT-ATC-T-AGCTCATATTGTCAAGTTCTTGGCAAGCT 2168
| | || ||| | |||| | | ||| ||| || ||| || |||||||||
Sbjct 2120 TCA-AAC-CTTTAACAAGCCTGATGAAAATTAGCACATCTTACCAAAATCCTGGCAAGCT 2177
Query 2169 TATTTGCTTGGATCTGAAAGATTGTTCTCGTTTGCAAAGTCTTCCTAACATGGTTAATTT 2228
|| ||||||||| ||||| |||||||||||||||| |||||| || ||||||||||||||
Sbjct 2178 TAGTTGCTTGGAGCTGAATGATTGTTCTCGTTTGCGAAGTCTGCCAAACATGGTTAATTT 2237
Query 2229 AGAATTTCTTGAAGTTCTTGAACTATCTGGCTGCTCAAAGCTTGAGACTATTCAGGGTTT 2288
|||| |||| ||| ||||| || ||||| |||||| |||| |||||||| ||||||||
Sbjct 2238 AGAACTTCTCAAAGCCCTTGATCTTTCTGGTTGCTCAGAGCTCGAGACTATCCAGGGTTT 2297
Query 2289 CCCACCAAACCTGAAAGAGTTATATATTGCTCGCACTGCGGTAAGACAAGTGCCACAACT 2348
||||| |||||||||||||||||| ||| | ||||||| ||||||||||||||||||||
Sbjct 2298 CCCACGGAACCTGAAAGAGTTATATCTTGTTGGCACTGCAGTAAGACAAGTGCCACAACT 2357
Query 2349 TCCTCAAAGTCTAGAACTCTTTAATGCACATGGCTGTCTCTCTCTCGAATTAATTTGTTT 2408
|||||||||||||||| |||||||||| ||||| ||| |||||||| ||| |||| ||||
Sbjct 2358 TCCTCAAAGTCTAGAATTCTTTAATGCCCATGGTTGTGTCTCTCTCAAATCAATTCGTTT 2417
Query 2409 GGACT-CTTCGAAGCTTCTTATGCACTACACATTCAGTAATTGTTTTAATCTATCTCCCC 2467
||||| | |||||||| | |||| |||||||| ||||||||||| |||||||||| |
Sbjct 2418 GGACTTCAA-GAAGCTTCCTGTGCATTACACATTTAGTAATTGTTTCGATCTATCTCCAC 2476
Query 2468 AAGTGATCAACGATTTTTTAGTGAAAGTGCTGGCTAATGCG----CAA--CACATACCAA 2521
||||| ||||||||||||||||| | | | ||||||||| | ||| ||||||||||
Sbjct 2477 AAGTGGTCAACGATTTTTTAGTGCAGGCGATGGCTAATGTGATTGCAAAACACATACCAA 2536
Query 2522 GAGAGCGTCA 2531
||||||||||
Sbjct 2537 GAGAGCGTCA 2546
Score = 1002 bits (542), Expect = 0.0
Identities = 717/800 (90%), Gaps = 18/800 (2%)
Strand=Plus/Plus
Query 2528 GTCAGCAGGAACTCAATGAATCTCCGGCTTTCAGCTTCTGTGTGCCCTCACATGGGAATC 2587
|||||||||||||||| || || ||||||||||||||||| ||||||||||| |||||
Sbjct 2594 GTCAGCAGGAACTCAACAAAACTTTGGCTTTCAGCTTCTGTGCGCCCTCACATGCGAATC 2653
Query 2588 AGTATTCCAAACTTGATCTGCAACCAGGATTTTCTGT-AATGACACGACTAAATCCTTCT 2646
| ||||||||||||||||||||||||||| |||| | ||||||||||||| ||||||||
Sbjct 2654 AAAATTCCAAACTTGATCTGCAACCAGGATCTTCT-TCAATGACACGACTAGATCCTTCT 2712
Query 2647 TGGAGGAACACGCTTGTAGGCTTTGCTATGCTGGTGGAAGTCGCATTTTCGGAGGATTAC 2706
||||||||||| ||||| |||||||||||||||||| ||||||||||||| |||| ||||
Sbjct 2713 TGGAGGAACACACTTGTGGGCTTTGCTATGCTGGTGCAAGTCGCATTTTCCGAGGGTTAC 2772
Query 2707 TGTGATACA-ACTGGTTTCGGCATTAGTTGTGTTTGCAGATGGAAAAACAAGGAAGGCCA 2765
|||||| | |||| ||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 2773 TGTGAT-GATACTGATTTTGGCATTAGTTGTGTTTGCAAATGGAAAAACAAGGAAGGCCA 2831
Query 2766 CTCTCATAGGATAGAAAGAAATCTGCATTGTTGGGCTCTAGGGAAAGCTTTTCAAAAGGA 2825
||||||||||| ||||| |||| |||||||||||||| ||||||||||| || ||| |||
Sbjct 2832 CTCTCATAGGAGAGAAATAAATTTGCATTGTTGGGCTTTAGGGAAAGCTGTTGAAAGGGA 2891
Query 2826 TCATATGTTTGTCTTCTTTGATGTCAACATGCGTCCAAG-TACTAATGAAGGAAATGACC 2884
||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||
Sbjct 2892 TCATACGTTTGTCTTCTTTGATGTCAACATGCGTCC-AGATACCGATGAAGGAAATGACC 2950
Query 2885 CCAATATCTGGGCTGATTTAGTTGTTTTTGAGTTCTTTCCTATCAACAAACAGAAAAAGC 2944
|| |||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||
Sbjct 2951 CCGATATCTGGGCTGATTTAGTTGTTTTTGAGTTCTTTCCTGTCAATAAACAGAGAAAGC 3010
Query 2945 CTCTAGATGATTGTTGCACAGTGAAAAGATGCGGAGTCCGTGTAATAACTGCTG-CAACT 3003
||||| ||||| |||||||||||| |||||| ||||||||| |||||||||||| ||||
Sbjct 3011 CTCTAAATGATAGTTGCACAGTGACAAGATGTGGAGTCCGTTTAATAACTGCTGTAAACT 3070
Query 3004 GGTAGTACAAGCCTTGAGAACATTTTACCAGTTTTGTCCTCT-AATCCGATGAAGTTTTC 3062
| | |||||| | ||||| || | |||||||||||||| | |||||||| || ||||
Sbjct 3071 -GCAATACAAGTATCGAGAATATATCACCAGTTTTGTCCT-TGGATCCGATGGAGGTTTC 3128
Query 3063 TGG---T--A-ATGAAGAAGTGTGGAGAGTCA-ACTATGATGGTTTACAGGAGATAGATA 3115
||| | | |||||||||| | |||||||| | |||| |||||||||||||||| |||
Sbjct 3129 TGGTAATGAAGATGAAGAAGTATTGAGAGTCAGA-TATGCTGGTTTACAGGAGATATATA 3187
Query 3116 AAGCTTTATTTCTTTACATAGCATGTTTTTTCAATGACGAGGATGTTGGTTTGGTGGCAC 3175
||||||| |||||||||||||| |||| |||||||||||||||||||||||||| ||||
Sbjct 3188 AAGCTTTGTTTCTTTACATAGCGGGTTTGTTCAATGACGAGGATGTTGGTTTGGTAGCAC 3247
Query 3176 CACTTATTGCTAACATTATTGACATGGACGTTAGTTATGGGCTCAAGGTCTTAGCCGATA 3235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3248 CACTTATTGCTAACATTATTGACATGGACGTTAGTTATGGGCTCAAGGTCTTAGCCTATA 3307
Query 3236 GGTCTCTCATAAGTGTATCTTCCAACGGGGAAATAGTGATGCATTATTTGCTGCGACAAA 3295
||||||||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||
Sbjct 3308 GGTCTCTCATACGTGTATCTTCCAATGGGGAAATAGTGATGCACTATTTGCTACGACAAA 3367
Query 3296 TGGGTAAAGAAATCCTCCAT 3315
||||||||||||||||||||
Sbjct 3368 TGGGTAAAGAAATCCTCCAT 3387
> AT5G45260.1 | Symbols: RRS1, ATWRKY52, SLH1 | Disease resistance
protein (TIR-NBS-LRR class) | chr5:18326203-18332609 FORWARD
LENGTH=4321
Length=4321
Score = 2041 bits (1105), Expect = 0.0
Identities = 2002/2423 (83%), Gaps = 109/2423 (4%)
Strand=Plus/Plus
Query 12 TGAGCAAATCGTCTACATCAGCTGCGTAAAACAGGTACGATACTCCTTCGTCAGCCACCT 71
|||| || |||| | ||||||||||||| || ||||||| ||||| ||||| ||||||||
Sbjct 95 TGAGGAATTCGTGTGCATCAGCTGCGTAGAAGAGGTACGGTACTCTTTCGTGAGCCACCT 154
Query 72 CTCCGAAGCTCTCCGCCGGAAAGGCAT-AATCGATGT-GT--T-CA--TCGATACCGACG 124
||| ||||||||||| || |||||||| ||| |||| || | | | |||| ||| |
Sbjct 155 CTCTGAAGCTCTCCGTCGAAAAGGCATAAAT-AATGTGGTCGTAGATGTAGATATCGATG 213
Query 125 ATTTTCTTTCCAACGAGTCTCAATCAAAGGTCGAGAGAGCTAGGGTTTCTGTGGTGGTTT 184
|| | |||| ||| |||||||| ||||| |||||| |||| ||||||||||| ||||||
Sbjct 214 ATCTGCTTTTCAAGGAGTCTCAGGCAAAGATCGAGAAAGCTGGGGTTTCTGTGATGGTTT 273
Query 185 TATCAGGGAACTCT-A-CATT------T-TGCCTTGACAAGCTCGTGAATGTTCTCGGGT 235
|| | || |||| | | | || | || ||||||||| ||| || ||||||| ||
Sbjct 274 TACCCGGAAACTGTGATCCTTCCGAGGTATGGCTTGACAAGTTCGCCAAGGTTCTCGAGT 333
Query 236 GCCAGAGGAACATC---GACCAGGTGGTGGTTCCAGTGTTGTACGGTGAGATTCCATTAC 292
|||| ||||||| | ||||||| ||||||| |||||||||||||||| | || |||||
Sbjct 334 GCCAAAGGAACAACAAGGACCAGGCGGTGGTTTCAGTGTTGTACGGTGACAGTCTATTAC 393
Query 293 AGGTCGAATGGGATAAGGC-A-CTGGA-TTCGAGGGGCTTATCATC-AGTCCACCAGTCC 348
|| | ||| || | | || | ||||| ||| || ||||||||| | | | ||||| |||
Sbjct 394 GGGACCAAT-GGCTTA-GCGAGCTGGATTTC-AGAGGCTTATCA-CGAATTCACCAATCC 449
Query 349 AGGAATAAATGCACCGACTCCGA-ACTTGTAGAAGAGATTACGAGAGATGTATATGAGAA 407
||||| |||| | |||| | | |||||||||||||||| ||||||||| || ||||
Sbjct 450 AGGAAGGAATGTAGTGACT-CTATACTTGTAGAAGAGATTGTGAGAGATGTGTACGAGAC 508
Query 408 GCTCTTCTAT-ATGGAAGGAATTGGAATCTACTCGAAACGGCTGGAGATAGAAAACATAG 466
|| ||| ||| ||| | ||||||||||||| ||||| | ||||||||| |||||||| |
Sbjct 509 GCACTTTTATGTTGG-ACGAATTGGAATCTATTCGAAGCTGCTGGAGATTGAAAACATGG 567
Query 467 TTTGCAAGCAACC-ATTTGGCGTCCGCTGTGTTGGAATTTGGGGTATGCCTGGAATAGGC 525
|| ||||||||| | | ||| |||| |||||||||||||||||||||||||| |||||
Sbjct 568 TTAACAAGCAACCGA-TAGGCATCCGTTGTGTTGGAATTTGGGGTATGCCTGGCATAGGA 626
Query 526 AAGACGACACTTGCTAAAGCAGTCTTTGACCAAATGTCTGGCGAATTTGATGCTTCTTGT 585
||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 627 AAGACAACACTTGCTAAAGCAGTCTTTGACCAAATGTCTAGCGCCTTTGATGCTTCTTGT 686
Query 586 TTTATCGAAGACTTTGACAAAGT-TATTCACGAGAAGGGCCTTTATCGTTTGCTGGAGGA 644
||||||||||||| ||||||| | ||||| |||||||| |||||| |||||||||||||
Sbjct 687 TTTATCGAAGACTATGACAAA-TCAATTCATGAGAAGGGTCTTTATTGTTTGCTGGAGGA 745
Query 645 AC-ACTTTTTAAAAGAGAAGC-CTGGTACTGACAGTACCACAACGAAACTGAGCTTGCTT 702
|| || |||| | | || | | | || || |||| | ||||||||||| |||
Sbjct 746 ACAAC-TTTT-GCCG-G--GCAAT-G-A-TG-CA--ACCATTATGAAACTGAGCTCGCTC 794
Query 703 AGAAACAAATTAAACAATCAGAGGGTTCTTGTTGTTCTTGATGACCTGCGCAATCCTTTG 762
||| ||| ||| |||| | |||| |||||||||||||| |||||| |||||||| || ||
Sbjct 795 AGAGACAGATTGAACAGTAAGAGAGTTCTTGTTGTTCTCGATGACGTGCGCAATGCTCTG 854
Query 763 ATTGCAGAG-CCTTTACTGGGA-GGGTTTGACTGGCTAGGACCCGAAAGCCTGATCATCA 820
||| ||| ||||| || || |||||||||||||||||||||| ||||||||||||||
Sbjct 855 GTTGGGGAGTCCTTT-CT-CGAGGGGTTTGACTGGCTAGGACCCGGAAGCCTGATCATCA 912
Query 821 TAACCTCTAGAGATAAACAGGTGCTTCGTCTTTGCCGAGTCAATCAAATATATGAGGTGC 880
||||||||||||||||||| ||| || | |||||| || ||||||||||||||||||| |
Sbjct 913 TAACCTCTAGAGATAAACAAGTGTTTTGCCTTTGCGGAATCAATCAAATATATGAGGTCC 972
Query 881 AGGGTTTAAACAAAAAAGAGGCTCTTCAACTCTTCTTGCGGTCTGCGTCTATTAA-GA-- 937
|||||||||| | |||||||||| |||||| ||||||| |||||||||||| || ||
Sbjct 973 AGGGTTTAAATGAGAAAGAGGCTCGTCAACTTTTCTTGCTGTCTGCGTCTATAAAGGAGG 1032
Query 938 ATAAGGGAGAGCAGAATCTCAAGGAGCTGTCAATGAAG-GTGATTGAA-TATGCAAATGG 995
||| |||||||||||||||| ||||| ||||| || || || | | || ||||| |||||
Sbjct 1033 ATATGGGAGAGCAGAATCTCCAGGAGTTGTCAGTG-AGAGT-AATAAATTATGCTAATGG 1090
Query 996 AAACCCATTAGCTCTCAGTATTTATGGCAGAGAGCTTAAAGGTAAG-AAACACTTATCAG 1054
|||||| |||||| ||||| ||||||| |||||||| ||||||||| ||| || | ||||
Sbjct 1091 AAACCCGTTAGCTATCAGTGTTTATGGAAGAGAGCTGAAAGGTAAGAAAAAAC-TCTCAG 1149
Query 1055 AAATGGAGACCACATTCCTCAAACTCAAGGGACATCCTCCCTTTAAGATTGTTGATGCAT 1114
|||||||||| ||||||||||||||||| ||| |||||| ||||||||||| |||||||
Sbjct 1150 AAATGGAGACTGCATTCCTCAAACTCAAGCGACGTCCTCCATTTAAGATTGTCGATGCAT 1209
Query 1115 TCAAGAGCAGCTATGA-ATCACTCAATGACAGGGaaaaaaaCATATTTCTCGACATAGCT 1173
| || |||| |||||| | |||||| ||||| ||||| ||||| ||| | |||||||||
Sbjct 1210 TTAAAAGCACCTATGACA-CACTCAGTGACAACGAAAAGAACATTTTTTTGGACATAGCT 1268
Query 1174 TGTTTTTTCGAGGGAGAAAATGTCGACTACGTGATGCAACTGCTCGAGGGCTGTGGTTTC 1233
||||| ||| |||||||||||||| |||||||||| |||||||| ||||| |||||||||
Sbjct 1269 TGTTTCTTCCAGGGAGAAAATGTCAACTACGTGATACAACTGCTTGAGGGTTGTGGTTTC 1328
Query 1234 CTTCCACATGTTGGAATTGATGTTCTTGTTGAGAAGTGTCTGGTTACTATTTCAGAAAAC 1293
|||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 1329 TTTCCACATGTTGAAATTGATGTCCTTGTTGACAAGTGTCTGGTAACTATTTCAGAAAAC 1388
Query 1294 CGTGTGTGGATGCATAATTTGATTCAGGACGTTGGCCGAGAAATAATAAATAAAGAAACA 1353
|| || ||| ||||||| ||| ||||| | ||||||||||| |||||| |||||||
Sbjct 1389 CGAGTTTGGTTGCATAAGCTGACCCAGGATATCGGCCGAGAAATCATAAATGGAGAAACA 1448
Query 1354 GTACAGATAGAGAGGCGCAGCAGACTGTGGAAACCTGGGAACATCAAATATTTATTAGAA 1413
|||||||| ||||||||||| ||||||||| ||||| ||| |||||||||||||||||||
Sbjct 1449 GTACAGATCGAGAGGCGCAGAAGACTGTGGGAACCTTGGAGCATCAAATATTTATTAGAA 1508
Query 1414 GATAACAGAGGA-AAAGAAGAAAATGGAGACCCCAAAACAA-CTTCCAAACGTGCTAAGG 1471
|||| || | | | ||| ||||||||| || ||||||| ||| |||||||||| |||
Sbjct 1509 TATAA-TGA--ACACA-AAGCAAATGGAGAACCTAAAACAACCTT-CAAACGTGCTCAGG 1563
Query 1472 GC-CTGGAACAGATCGAAGGCATATTTCTTGACACATCAAACATAAGTTTTGATGCCG-A 1529
|| || ||| ||||||||||| | ||||| |||||||||||| |||| |||||| | | |
Sbjct 1564 GCTCT-GAAGAGATCGAAGGCCTGTTTCTAGACACATCAAACTTAAGATTTGAT-CTGCA 1621
Query 1530 GCCTTCTGCCTTTGAGAATATGCTGAACCTTAGATTGCTTAAGATTTACAGTTCCGATCC 1589
||| ||||||||| |||||||| |||||||||||||||| || ||||| ||||| ||||
Sbjct 1622 GCCCTCTGCCTTTAAGAATATGTTGAACCTTAGATTGCTCAAAATTTATTGTTCCAATCC 1681
Query 1590 TGAAATCTATCCTGTAATCAATTTCCCTAA-TGGCTCTCTCCGTTATCTTCCTAACGAGC 1648
|||| || ||||||||||||||||||| || |||||||| | || ||||||||| ||||
Sbjct 1682 TGAAGTCCATCCTGTAATCAATTTCCC-AACAGGCTCTCTGCATTCTCTTCCTAATGAGC 1740
Query 1649 TGAGACTCCTTCATTGGGACAACTATCCCCTGAAATCTTTGCCTCAAAATTTTGATCCTA 1708
| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| |
Sbjct 1741 TAAGACTCCTCCATTGGGAGAACTATCCTCTGAAATCTTTGCCTCAGAATTTTGATCC-A 1799
Query 1709 A-GCACCTTGTTGAAATCAACATGCCCAACAGTCAACTTCAGAAACTTTGGGGTAAAACC 1767
| ||||||||| |||||||||||||| | |||||||||||||||||||||||| ||||
Sbjct 1800 AGGCACCTTGTCGAAATCAACATGCCGTATAGTCAACTTCAGAAACTTTGGGGTGGAACC 1859
Query 1768 AAGAACCTGGAGATGTTGAAGACAG-TTAGACTGTGTCATTCCCAGCAACTAGTTGATAT 1826
||||||||||||||||||| ||| | | || || || |||||||| || |||||||||||
Sbjct 1860 AAGAACCTGGAGATGTTGAGGAC-GATCAGGCTTTGCCATTCCCACCATCTAGTTGATAT 1918
Query 1827 CAG-CGATCT-TTGGGAAGCTCCACATCTTGAGGTAATTGATCTCCAGGGTTGTACAAGG 1884
| | ||||| || ||||| | |||||||||||||||||||||| |||||||| ||
Sbjct 1919 C-GATGATCTCTT-AAAAGCTGAAAATCTTGAGGTAATTGATCTCCAAGGTTGTACGAGA 1976
Query 1885 CTTCAGAGTTTCCCAAACACAGGTCAATTCCTGCATCTACGAGTTTTAAATCTCTC-GCA 1943
|| |||| ||||||| | |||||| ||| || | |||||||||| |||||||||| |
Sbjct 1977 CTGCAGAATTTCCCAGCCGCAGGTCGATTGCTACGTCTACGAGTTGTAAATCTCTCAG-G 2035
Query 1944 TTGCATAGAGATaaaaaaaaT-TCC-GGAGGTTCCACCAAATATTAAGAAATTGCATCTC 2001
||||||| |||| |||| | ||| || |||||||||||||| ||||| | |||||
Sbjct 2036 TTGCATAAAGAT--TAAAAGTGTCCTAGAAATTCCACCAAATATTGAGAAACTACATCTA 2093
Query 2002 CAGGGAACTGGCATAATAGCATTACCACTTTCCACTACTTTTGAGCCAAACCACACAAAG 2061
||||||||||||||| ||||||||||| ||| | | ||| || |||||||||| | | ||
Sbjct 2094 CAGGGAACTGGCATATTAGCATTACCAGTTT-C-C-ACTGTTAAGCCAAACCATAGAGAG 2150
Query 2062 CTTTTAAATTTTCTAACAGAAAATCCAGGTCTTTCAAATGCCTTGAAACTTGAGCGTTTG 2121
||| | |||||||||||||||| ||| ||||||||| | | | |||||||||||||
Sbjct 2151 CTTGTGAATTTTCTAACAGAAATTCCGGGTCTTTCAGA-G----G-AACTTGAGCGTTTA 2204
Query 2122 AGAAGTCTTCT-GATATCTAGCTCATATTGTCAAGTTCTTGGCAAGCTTATTTGCTTGGA 2180
| |||||| || || ||||| ||||| |||||||| |||||| |||||||||||||||||
Sbjct 2205 ACAAGTCTGCTGGA-ATCTAACTCATCTTGTCAAGATCTTGGGAAGCTTATTTGCTTGGA 2263
Query 2181 TCTGAAAGATTGTTCTCGTTTGCAAAGTCTTCCTAACATGGTTAATTTAGAATTTCTTGA 2240
||||||||||| ||| ||||||| ||||| || ||||||| |||||||| | |||| |
Sbjct 2264 GCTGAAAGATTGCTCTTGTTTGCAGAGTCTGCCAAACATGGCTAATTTAG-A--TCTT-A 2319
Query 2241 A-GTTCTTGAACTATCTGGCTGCTCAAAG-CTTGAGACTATTCAGGGTTTCCCACCAAAC 2298
| |||||||| || || || ||||| ||| ||| | |||||||||||||||| |
Sbjct 2320 ATGTTCTTGATCTCTCGGGTTGCTC-AAGTCTTAATTCTATTCAGGGTTTCCCTCGTTTT 2378
Query 2299 CTGAAAGAGTTATATATTGCTCGCACTGCGGTAAGACAAGTGCCACAACTTCCTCAAAGT 2358
|||||| |||||||| ||| | ||||||| ||||| |||||||||||||||||||||||
Sbjct 2379 CTGAAACAGTTATATCTTGGTGGCACTGCAATAAGAGAAGTGCCACAACTTCCTCAAAGT 2438
Query 2359 CTAGAACTCTTTAATGCACATGG 2381
|||||| |||| |||||||||||
Sbjct 2439 CTAGAAATCTTGAATGCACATGG 2461
> AT4G19520.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class) family | chr4:10639269-10647079 REVERSE LENGTH=5463
Length=5463
Score = 135 bits (73), Expect = 2e-30
Identities = 549/769 (71%), Gaps = 72/769 (9%)
Strand=Plus/Plus
Query 2554 GCTTTCAGCTTCTGTGTGCCCTCACATGGGAA-TC-AGTATTCCAAACTTGATCTGCAAC 2611
|||| |||||||||| | || |||| | || || || ||||||||||| |||| ||||
Sbjct 3367 GCTTGCAGCTTCTGTCTACCTTCACCT-ACAAGTCGAG-ATTCCAAACTTTATCTACAAC 3424
Query 2612 CAGGATTTTCTGTAATGA-CACGACTAAATCCTTCTTGGAGGAA-CACGCTTGTAGGCTT 2669
|||||| ||| ||||| | |||||||| || ||| ||||| || |||||
Sbjct 3425 CAGGATCTTCAACAATGATTA-TTCTAAATCCAAAAACGA-GAAGTACGCTCGTGGGCTT 3482
Query 2670 TGCTATGCTGGTGGAAGTCGCATTTTCGGAGGA-TTACTGTGATACAACTGGTTTCGGCA 2728
||| || | || ||||| |||| || |||| || | |||||| ||||||| |||
Sbjct 3483 TGCAATATTAGTTGAAGTTTCATTCTCAAAGGATTTTC-ATGATACTGCTGGTTTAGGCT 3541
Query 2729 TTAGTTGTGTTTGCAGATGGAAAAACAAGGAAGGCCACT-CTCAT-AG-GATAGA-AAGA 2784
|||| ||||||||||||||||| |||| ||||||| | ||||| || | | || ||
Sbjct 3542 TTAGGTGTGTTTGCAGATGGAATGACAAAAAAGGCCA-TGCTCATAAGCG-T-GATAA-T 3597
Query 2785 AATCTGCATTGTTGGGCTCTAGG-GAAAGCTT-TT-C--A-A--AA-G--GATCATATGT 2833
| | | ||||| ||||||| ||| | ||| || || | | | || | ||||| ||||
Sbjct 3598 ATTTTTCATTGCTGGGCTCCAGGCG-AAG-TTGTTCCTAAGATTAACGACGATCACATGT 3655
Query 2834 TTGTCTTCTTTGATGTCAACATGCGTCCAAG--TACTA-ATGAAGGAAATGACCCCAATA 2890
||||||| |||||| | || |||| |||||| || || ||||||| ||| | | ||
Sbjct 3656 TTGTCTTTTTTGATCTTAAAATGCATCCAAGTATATTATTTGAAGGAGATGTCTTCGGTA 3715
Query 2891 TCTGGGCTGATTTAGTTGTTTTTGAGTTCTTTCCTATCAACAAACAGAAAAAGCCTCTAG 2950
||| ||||||| ||||||| ||||| | || || ||||||| ||| | | || | |||
Sbjct 3716 TCTTGGCTGATCTAGTTGTCTTTGAAATATTCCCGGTCAACAAGCAGGAGATGCATGTAG 3775
Query 2951 ATGATTGTTGCAC-AGTGAA-AAGATGCGGAGTCCGTGT-AATAACTGCTGCAACTGGTA 3007
||| ||||||| | | || || ||| |||||| ||| | ||| || |||| |||| |
Sbjct 3776 GCGATAGTTGCACTA-T-AACAAAATGTGGAGTCTATGTGATTAA-TGATGCAGCTGGCA 3832
Query 3008 G-TACAAGCCTTGAGAACA-TTTTA---C-CAGTTTTGTCCTCT-AATCCGA-TGAAG-T 3058
| | |||| | || |||| | | | || | || | | | || | | ||||| |
Sbjct 3833 GCT-CAAG--TGGA-AACACGATGACCCCACAATGTTCTTCAATGGATTC-ACTGAAGCT 3887
Query 3059 TTT--CTGGT-AATG-AAGAAGTG-TGGAGAGTCAACTATGATGGTTTACAGGAGATAGA 3113
||| |||| || | || ||| | | ||||| ||||||| ||||||| | | | |||
Sbjct 3888 TTTAGATGGTAAAGGTAAAAAGAGATTAAGAGTTAACTATGCTGGTTTAAAACAAAGAGA 3947
Query 3114 TAAAGCTTTATTTCTTTACATAGCATGTTTTTTCAATGACGAGGATGTTGGTTTGGTGGC 3173
||||||||||||||||||||||||||||| || || ||| | | || |||| | ||
Sbjct 3948 AAAAGCTTTATTTCTTTACATAGCATGTTTGCTCGGTGGTGAGAAGGCTGATTTGCTAGC 4007
Query 3174 ACCACTTATTGCTAACATTATTGACATGG-ACGTT-AGT-TATGGGCTC-AAGGTCTTAG 3229
|| | || |||||| | | |||| | | | || ||| || | ||| ||| |||||
Sbjct 4008 ACAATTTCTTGCTAG--T-ACTGACTTTGTAA-TTGAGTCTACG--CTCGAAGA-CTTAG 4060
Query 3230 CCGATAGGTCTCTCATA-AGTGTATCTTCCAACGGGGAAATAGTGATGC 3277
| | |||| ||||||| | | |||||||||| |||||| || ||||||
Sbjct 4061 CTGGCAGGTATCTCATAGA-TATATCTTCCAATGGGGAAGTAATGATGC 4108
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 169162931796
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5