BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915659
Length=3555
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 2303 0.0
AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-N... 1201 0.0
> AT5G45060.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18182038-18186495 FORWARD LENGTH=3926
Length=3926
Score = 2303 bits (1247), Expect = 0.0
Identities = 2711/3389 (80%), Gaps = 216/3389 (6%)
Strand=Plus/Plus
Query 31 CCACCTCAACATCAAGTGTTCATCAATTTCCGCGGGGCAGAGTTACGCAAT-GGATTCGT 89
||||| ||||||||||| |||||||||||||| || | ||| ||||| | | ||||||||
Sbjct 31 CCACCACAACATCAAGTATTCATCAATTTCCGTGGAGAAGATTTACG-ACTCGGATTCGT 89
Query 90 CAGCCATCTCGTCACG--GCCTT-GCAAAGTAAGGACATTAACGTCTTCATCGACAAGC- 145
|||||||| || | | || || | ||| | |||| || |||||||||||||| |
Sbjct 90 AAGCCATCTAGT-A-GAAGCTTTAG-AAAACGATAACATAAAAGTCTTCATCGACAA-CT 145
Query 146 ACGAAGACCGAGGCAAACCCATAGAAATACTATTGGA-TAGGATACA-GAAGT-CAAGAA 202
||| |||| |||| |||| |||||| ||| || | | |||||| | | | ||| ||
Sbjct 146 ACGCAGACAAAGGCGAACCTTTAGAAACACT-TTTAACCAAGATACATG-ACTCCAA-AA 202
Query 203 TAGCTCTGGTTATCTTCTCTGGGAGGTACACCGACTCCGTC-TGGTGCATGAGAGAGGTG 261
| ||||| | ||||||||| |||| |||||| || | | | |||||| |||||||| |
Sbjct 203 TCGCTCTAGCTATCTTCTCCGGGAAGTACACTGAAT-CAACATGGTGCTTGAGAGAGCTA 261
Query 262 GCGAAGATCAAGGATTGTATGGATG-AAGG-AACACTCG-AGGTGATTCCCATCTTTTAC 318
|||| ||| || |||||| |||| | |||| || ||| | | | ||||| ||||| |||
Sbjct 262 GCGATGATAAAAGATTGTGTGGA-GAAAGGTAA-ACTTGTTGCT-ATTCCTATCTTCTAC 318
Query 319 AAGGTAGAGCCATCCAC-GGT-GAAATATTTGATGGGAGACTTTGGTGATACATTCAGGA 376
|||||||| |||||||| | | || | || || ||| | || |||||| | || | ||
Sbjct 319 AAGGTAGATCCATCCACTGTTAGAGGTGTTAGA-GGG-CAGTTCGGTGATGCTTTTA-GA 375
Query 377 GTTTGGCCATGAATGAATATGATGAGGGGAAGGAG-AA-A-TGGGAAGACGCTTTGAAGG 433
| | | || | ||| ||||| | ||| || || | ||| || | |||||||| |
Sbjct 376 G-AT---CTTG-AGGAACGTGATGTGATTAAGAAGAAAGAGTGGAAACAAGCTTTGAA-G 429
Query 434 TGG-TTTGTGG-TATAATGGGCA-C-CGTGGTCGATGAAAAAAGTGAC-GAGAGCGAAAT 488
||| || ||| | |||| || | | | || || | || |||||| | ||||| |||||
Sbjct 430 TGGATTCCTGGCT-TAATTGGTATCAC-TGTTC-ACGATAAAAGT-CCTGAGAGTGAAAT 485
Query 489 AGT-aaaaaaaaCTGTGGATGACATTAGGAAAGCGCTGATCAG-AA-TTCCATCGGAGGG 545
| | || ||| | || | || ||| ||||| | ||| || || || ||| ||||||
Sbjct 486 ACTCAACGAAATC-GTTAAGGAGGTTAAGAAAGTGTTGA--AGAAAGTTTCATTGGAGGG 542
Query 546 AAGCC-AAA--TTACCTCTGTCAATCCTTCACCAAA-TAGGGACACTCGAACTTC-CTCA 600
||||| ||| | |||||| |||| ||| |||| || ||||||| || ||| | |
Sbjct 543 AAGCCAAAAGGTGGTCTCTGTGGATCCATCA-CAAAGTATTGACACTCTAAGTTCGGT-A 600
Query 601 GG-GGAAGAAAAGCATGAGACTTTTGGAAAT-GAATTACGCCTAAAGGAATTGGAAGAGA 658
|| || |||||| || |||||||||| ||| || ||| | ||||| ||||||||||
Sbjct 601 GGAGG-TGAAAAGGATAAGACTTTTGG-AATCAAACAACGGTTGAAGGAGTTGGAAGAGA 658
Query 659 AATTGGATC--G-TACAAT-CAAGAAAACTTGTATCATCGGAGTTGTTGGTATGCCTGGA 714
| ||||||| | || ||| |||| |||| || |||| ||||||||||| |||||||||
Sbjct 659 AGTTGGATCTTGTTA-AATACAAGGGAACTCGTGTCATTGGAGTTGTTGGGATGCCTGGA 717
Query 715 ATTGGTAAAACCACACTGCTGAAAGAGCTCTTTAAGAAGTGGCAGAATAAGTTTAATAGG 774
||||| |||||||||||| |||||||||||| ||||| |||||| |||||| |||
Sbjct 718 ATTGGCAAAACCACACTGGTGAAAGAGCTCTATAAGACCTGGCAGGGCAAGTTTTCGAGG 777
Query 775 TGCGCATTAATCGATGAAATCCGTGGAAAGTCAAATCCCTCCGAGGATTTTGATAT-CTT 833
| || || |||||| |||||||||| ||||||||| || | ||| || || | |||
Sbjct 778 TATGCGTTGATCGATCAAATCCGTGGGAAGTCAAATAACTTC-AGG--TTAGA-GTGCTT 833
Query 834 GCCCAAATTGCTTGTACGAG-AGTTACTA---GCGTTTAATGTGT-C-CACCTTAGAAAA 887
||| | |||||| || ||| || ||||| | ||| ||| | | || | |||| |
Sbjct 834 GCCTACTTTGCTTTTA-GAGAAGCTACTACCGGAGTTGAAT-AATCCTCAAC-TAGATAG 890
Query 888 TGTTGAAGACCCATACGAAGTGT-TTAAGGGTCTACTTC-TCAACGAGAAAGTTCTTGTC 945
| ||||||| |||||| || | |||||||||||| | | |||| |||||||| |||
Sbjct 891 TATTGAAGAACCATAC-AAAACTCATAAGGGTCTACTGCGTGAACG-CAAAGTTCTCGTC 948
Query 946 ATTCTTGACGATGTTAGTAAAAGTGAACAGATAGACGCTCTTCTTGGG----A--A---- 995
| ||||| |||||||||| ||| ||||| ||| | |||||||||||| | |
Sbjct 949 GTCCTTGATGATGTTAGTAGAAGGGAACAAATATATGCTCTTCTTGGGAAATATGATCTT 1008
Query 996 -AC-G----C--GACTGGATTACTGAAGGAAGCAGGATTGTCATTGCAACAAATGACATG 1047
|| | | || ||||| | || || |||||||| |||||||||| || || ||
Sbjct 1009 CACAGTAAACATGAGTGGATCAAAGATGGCAGCAGGATCATCATTGCAACGAACGATATC 1068
Query 1048 TCCTTACTAAAGGAT-TGGGTAACA-GATACTTACGTGGTCCCGCTACTGAACCACCA-A 1104
|||| | | |||| | | || || || ||||| ||||| | || | | ||||| || |
Sbjct 1069 TCCTCATTGAAGGGTCT-CGT-TCATGACACTTATGTGGTTCGGCAATTAAACCA-CAGA 1125
Query 1105 GATGGCTTGA-AACTTTTCCACTATCATG-C---C-TT-TGATGAAGCTAATCCTCCTGA 1157
|| ||||| | ||||||| | |||||| | | | || |||| |||| | |||||| |
Sbjct 1126 GACGGCTT-ACAACTTTTTCGCTATCACGCCTTTCATTATGATCAAGCCACTCCTCC-AA 1183
Query 1158 A----GATTTCATGCAGCTTTCAAAAGAGTTTGTGCATTTTGCCAGAGGCCTTCCACTTG 1213
| ||||||||| ||||||| | ||||||||||||| ||| ||||||| |||||| |
Sbjct 1184 AGGTGGATTTCATGAAGCTTTCTGATGAGTTTGTGCATTATGCTAGAGGCCATCCACTAG 1243
Query 1214 CTCTCAAAATATTGGGTAAAGAACTTTATG-GAAAGGGA-AGGCTGCAGTGGGAAGA-AA 1270
|||||||||||||||||| ||| ||||||| |||| | | | ||| |||||| | ||
Sbjct 1244 CTCTCAAAATATTGGGTAGAGAGCTTTATGAGAAA--AATATGAAGCATTGGGAA-ACAA 1300
Query 1271 AACGGA-AGTTACTCGCAGAGAGTCCCAGCC-CTTATATT-GA-AAGTGTCTTCCGAGTG 1326
||| || | |||| || | ||||||| || |||||||| || || ||| | | |||
Sbjct 1301 AACTGATA-ATACTTGCTCAAAGTCCCA-CCACTTATATTGGAGAA--GTCGTGCAAGTA 1356
Query 1327 AGTTATGATGAATTGAGTTCAGATCAGAAAAAAGCATTTCTAGACATAGCTTGTTTCAGA 1386
||||||||||||||||||| | |||||| | |||||||| ||||||||||||||||||
Sbjct 1357 AGTTATGATGAATTGAGTTTGGCGCAGAAAGATGCATTTCTCGACATAGCTTGTTTCAGA 1416
Query 1387 TCGCAGGATGTGGCTTATGTAGAAAGTTTACTTGCTTCATCTGA---AGCA-ATG-AG-T 1440
|| |||||||||| |||||||||||||||||| | ||| ||||| | | || |
Sbjct 1417 TCACAGGATGTGGATTATGTAGAAAGTTTACTGGTTTCGTCTGACCCTGGATCTGCTGAA 1476
Query 1441 GCAGTAAAAGCTCTCACGGATAAGTTCCTGATTAATACTTGTGACGGTCGAGTGGAGATG 1500
||| |||||||||||| | |||||||| ||||| |||| |||||||| || |||||||||
Sbjct 1477 GCAATAAAAGCTCTCAAGAATAAGTTCTTGATTGATACATGTGACGGCCGTGTGGAGATG 1536
Query 1501 CATGATCTACTGTATACATTTTCGAGGGAACTTGATCCTAAAACATCCACTGAAGATGAT 1560
|||||||||||||||| |||||| ||||||||||||| |||| |||||||| ||| || |
Sbjct 1537 CATGATCTACTGTATAGATTTTCTAGGGAACTTGATCTTAAAGCATCCACTCAAGGTGGT 1596
Query 1561 CGCACAGGACGAAGGTTGTGGCGCCATCAAGACATAATCAAGGAAGGCAAAATTAATGTA 1620
||| | ||||||||| ||| | || | |||| | | || ||||||||||
Sbjct 1597 AGCAAACAACGAAGGTTATGG-G---TC----C---GTCAA-G-A--CATAATTAATGTA 1641
Query 1621 GTGCAGAAAGA-AATGAGAGCTGCCCATGTCAGAGGTATTTTCCTAGATTTGTCTCAAGT 1679
||||||| | |||| ||||||| |||| |||||||||||||||||||||||| ||||
Sbjct 1642 CAGCAGAAA-ACAATGGGAGCTGCAAATGTTAGAGGTATTTTCCTAGATTTGTCTGAAGT 1700
Query 1680 GAAGGGCGAAACGAGGTTAG-CTAAAGATCACTTCAACCGTATGAC-TAATCTACGGTAT 1737
||||| ||||| || |||| | || |||||||| |||| | ||||| ||||||
Sbjct 1701 GAAGGTTGAAACAAGCTTAGAC-CGTGAACACTTCAAGAATATG-CGCAATCTCCGGTAT 1758
Query 1738 CTCAAGGTCTATAATTCTCATTGTCCTCAGGAATGTAAAACTGAA-AATAGGATTAACAT 1796
|||||| | || ||||| ||||| ||||| |||||| ||| || |||| ||| |||||
Sbjct 1759 CTCAAGTTATACAATTCACATTGCCCTCACGAATGTCTAAC-CAATAATAAGATAAACAT 1817
Query 1797 CCCTGATGGACTTAAGCTACCATTGAAAGAGGTTCGATGCCTCCACTGGTTGAAATTCCC 1856
|||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1818 GCCTGATGGACTTGAGCTACCATTGAAAGAGGTTCGATGCCTTCACTGGCTGAAATTCCC 1877
Query 1857 ATTAGATGAACTTCCCGAA-GCTTTCAACCCGATTAATCTCGTCGACCTTAAGCTGCCAT 1915
|||||| |||||| || || | ||| |||||||||||||||||||||||||||||||||
Sbjct 1878 ATTAGAGGAACTT-CCAAACGATTTTGACCCGATTAATCTCGTCGACCTTAAGCTGCCAT 1936
Query 1916 ACAGTGAGATTGAACGACTTTGGGAGGGTGACAAGGATACACCAGTCTTAAAATGGGTCG 1975
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 1937 ACAGTGAGATTGAACGACTTTGGGATGGTGTTAAGGATACACCAGTCTTAAAATGGGTCG 1996
Query 1976 ATCTCAATCACTCAAGTATGTTGAGCAGCTTGTCAGGATTATCAAAGGCTCCAAATCTTC 2035
|||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1997 ATCTCAATCACTCAAGTAAGTTGTGCAGCTTGTCAGGATTATCAAAGGCTCAAAATCTTC 2056
Query 2036 AAGGACTGAACCTTGAAGGGTGCACACGTCTTGAATCTCTT-GCAGATGTGGATTCCAAA 2094
|| ||||||||||||||||||||||| |||||||||||||| | ||||||| ||| |
Sbjct 2057 AAAGACTGAACCTTGAAGGGTGCACAAGTCTTGAATCTCTTCG-AGATGTGAATTTGACG 2115
Query 2095 TCACTGAAAAGTCTCACCCTCAGCGGCTGCACAAGCTTCAAGAAATTCCCGTTGATTCCA 2154
|| |||||| ||||||||||||| |||| ||| ||||||| |||| || |||||||||
Sbjct 2116 TCTTTGAAAACTCTCACCCTCAGCAACTGCTCAAACTTCAAGGAATTTCCATTGATTCCA 2175
Query 2155 GAAAATCTAGAAGCTTTACACTTAGACAAAACAGCAATAAGTCAACTTCCTGACAACGTG 2214
|||||| || |||||||| |||| ||| ||| | ||||||||||||||||||||||||
Sbjct 2176 GAAAATTTAAAAGCTTTATACTTGGACGGGACATCGATAAGTCAACTTCCTGACAACGTG 2235
Query 2215 GTGAACCTCAAGAA-ACTTGTCTTATTAAATATGAAGGACTGCGAACTGCTAGAGAATAT 2273
| ||||||||| || |||||||||||| ||||||||||||||| || |||| |||| |||
Sbjct 2236 GGGAACCTCAA-AAGACTTGTCTTATTGAATATGAAGGACTGCAAAGTGCTGGAGACTAT 2294
Query 2274 CCCGACCTGTGTT-GATAAGCTGAAAGCTCTTCAAAAGCTGGTACTCTCTGGTTGTAAAA 2332
||| ||||||||| | | |||||||| |||||||||| || ||||| || |||||| ||
Sbjct 2295 CCCTACCTGTGTTAG-TGAGCTGAAAACTCTTCAAAAACTTGTACTTTCAGGTTGTTCAA 2353
Query 2333 AGCTCCAG-AATTTTCCAGAAGTCAACAAGAGCTCTTTAAAAATTTTACTCCTGGATAGG 2391
||||| || ||||| |||||| |||||||||||||||||||||||||||| || ||| ||
Sbjct 2354 AGCTCAAGGAATTT-CCAGAAATCAACAAGAGCTCTTTAAAAATTTTACTTCTAGATGGG 2412
Query 2392 ACAGCCATAAAAACGATGCCACAGTTACCATCAGTGCAGTATCTATGCTTAAGCTTCAAT 2451
||| |||| ||||||||||| |||||||| ||||| |||||| ||||||||||| |||
Sbjct 2413 ACATCCATCAAAACGATGCCGCAGTTACCCTCAGTACAGTATTTATGCTTAAGCAGAAAT 2472
Query 2452 GATCATCTTAGCTGCATTCCAGCTGACATCAATCAACTTTCTCAATTAACACGGCTGGAT 2511
|||||||| | || | ||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct 2473 GATCATCTCATCTACCTTCCAGCTGGCATCAATCAAGTTTCTCAGTTAACACGGCTGGAT 2532
Query 2512 TTGAAGTATTGTAAGA-GTCTTACATCTGTTCCAGAGTTACCACCAAATCTTCAGTACTT 2570
||||||||||||| || | ||||||| |||||||||||| ||||||| ||| ||||||||
Sbjct 2533 TTGAAGTATTGTACGAAG-CTTACATATGTTCCAGAGTTGCCACCAACTCTCCAGTACTT 2591
Query 2571 TGATGCAGACGGCTGTAGCGCACTGAAGACTGTTGCAAAACCGCTGGCCCGCATCATGCC 2630
|||||| | ||||||||| ||||||||| |||||||||||| |||||||| |||||| |
Sbjct 2592 AGATGCACATGGCTGTAGCTCACTGAAGAATGTTGCAAAACCACTGGCCCGTATCATGTC 2651
Query 2631 GACCGTGCAGAACCACTGCACTTTCAATTTCACCAACTGTGGTAACCTGGAGCAAGCTGC 2690
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2652 AACCGTGCAGAACCATTACACTTTCAATTTCACCAACTGTGGTAACCTGGAGCAAGCTGC 2711
Query 2691 AAAGGAGGAAATTGCATCGTATGCTCAAAGGAAATGCCAGTTACTATCAGATGCTCGTAA 2750
|||||||||||| |||||||||||||||| ||||| ||||| || |||||||| |||||
Sbjct 2712 AAAGGAGGAAATCACATCGTATGCTCAAAGAAAATGTCAGTTGCTGTCAGATGCACGTAA 2771
Query 2751 ACACTATGATGAGGGTCTTAGTTCAGAGGCTTTGTTCACCACTTGCTTCCCTGGATGTGA 2810
|||||| |||||||| | ||||||||||||||| ||||||||| |||||||||||
Sbjct 2772 ACACTACAATGAGGGT-T-----CAGAGGCTTTGTTCAGCACTTGCTTTCCTGGATGTGA 2825
Query 2811 GGTGCCTTCGTGGTTTTGTCATGACG-GAGTTGGATCTCGGTTGGAACTCAAACTGCTCC 2869
|||||||||||||||| ||||||| | | |||||||||| |||| || ||||| ||||
Sbjct 2826 GGTGCCTTCGTGGTTTGGTCATGAAGCG-GTTGGATCTCTGTTGCAAAGAAAACTCCTCC 2884
Query 2870 CACATTGGCATGACAAGAGCCTTTCTGGGATAGCTTTATGTGCTGTAATCTCATTTCCTG 2929
||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||||
Sbjct 2885 CACATTGGCATGACAAGAGGCTTTCTGGAATAGCTCTATGTGCTGTAGTCTCATTTCCTG 2944
Query 2930 GT-GTCAAAGATCAAAC-CAGCGGCTTGTCGGTGGCATGCACCTTTACGATAAAAGCTGG 2987
| ||| |||||| | |||| |||| |||||| |||||||||||| ||||||||||
Sbjct 2945 ACAGCCAA-GATCAA-CTCAGCTGCTTCTCGGTGACATGCACCTTTAAAATAAAAGCTG- 3001
Query 2988 AAGAACA--TCATGGATCCCCTTTACTTGCCCAGTAGGAAGTTGGACTAGAGAAGGA--- 3042
|||| || || ||| |||||||||||||||| ||||||| |||||||||||| |||
Sbjct 3002 AAGA-CAAGTCTTGGGTCCCCTTTACTTGCCCGGTAGGAATTTGGACTAGAGAGGGAAAC 3060
Query 3043 --GAAC--C-G-ATTCAGTCAAATCATGTTTTCATAGCCTACATTAGTTGCCCACATTCC 3096
||| | | ||| |||| |||||||||||||||||||||||||| ||||||||||
Sbjct 3061 AAGAAAGACAGGATTGAGTCGGATCATGTTTTCATAGCCTACATTAGTAGCCCACATTCA 3120
Query 3097 ATAAGGTGTCTCAAAGACGA-GAACTCTGACAAATGCAATTTTACTGAAGCCTCCCTTGA 3155
|||||||||||| |||| || ||||||||| ||||||||||||| |||||||||||||||
Sbjct 3121 ATAAGGTGTCTCGAAGA-GAAGAACTCTGATAAATGCAATTTTAGTGAAGCCTCCCTTGA 3179
Query 3156 GTTTACTGTGACAGGTGGGACAAGTGAG-ATAGGA--A---A-GGTGTTGAGGTGCGGTT 3208
|||||| |||||| ||| ||||||| | || ||| | | ||| |||| ||| || |
Sbjct 3180 GTTTACGGTGACAAGTGATACAAGTG-GTATTGGAGTATTCAAGGTTTTGAAGTGTGGAT 3238
Query 3209 TGAGTTTGGTGTACGaaaaaaataaaaacaaaaaCAGTTCTCATGAGGCAACGTATGATA 3268
||||||||||||| ||||| | ||||||||||||||||||| |||||||| |||||||
Sbjct 3239 TGAGTTTGGTGTATGAAAATGACAAAAACAAAAACAGTTCTCTTGAGGCAAAGTATGATG 3298
Query 3269 TGCCTGTTGAAGTGAGCTAT-AAGGAACC 3296
| |||||||||||||||| | ||| ||||
Sbjct 3299 TTCCTGTTGAAGTGAGCTTTCAAG-AACC 3326
> AT5G45250.1 | Symbols: RPS4 | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18321914-18326022 REVERSE LENGTH=3654
Length=3654
Score = 1201 bits (650), Expect = 0.0
Identities = 1644/2107 (78%), Gaps = 135/2107 (6%)
Strand=Plus/Plus
Query 30 GCCACCTCAACATCAAGTGTTCATCAATTTCCGCGGGGCAGAGTTACGCAATG-GATTCG 88
|||||| || ||||| ||||||||||||||||| |||||||| || ||| | ||||||
Sbjct 36 GCCACCGCAGCATCAGGTGTTCATCAATTTCCGTGGGGCAGATTTGCGC-CGGAGATTCG 94
Query 89 TCAGCCATCTCGTCACGGCCTTGCAAAGT-AAGGACATTAACGTCTTCATCGACAAGC-A 146
||||||||||||| ||||||||| ||| | || |||| |||||||| |||||| | | |
Sbjct 95 TCAGCCATCTCGTAACGGCCTTG-AAATTGAACAACATCAACGTCTTTATCGACGA-CTA 152
Query 147 CGAAGACCGAGG-CAAACC-CATAGAAATACTATTGGATAGGATACAGAAGT-CAAGAAT 203
|||||| |||| | |||| | |||| |||| || | |||||| || ||| ||| |||
Sbjct 153 TGAAGACAGAGGTC-AACCTC-TAGATGTACTGCTGAAGAGGATAGAGGAGTCCAA-AAT 209
Query 204 AGCTCTGGTTATCTTCTCTGGGAGGTACACCGACTCCGTCTGGTGCATGAGAGAGGTGGC 263
| | ||| ||||||||| || | |||||||| || ||||||||| |||||||| |||
Sbjct 210 CGTTTTGGCTATCTTCTCCGGCAACTACACCGAGTCAGTCTGGTGCGTGAGAGAGCTGGA 269
Query 264 GAAGATCAAGGATTGTATGGATGAAGGAACACTCGAGGTGATTCCCATCTTTTACAAGGT 323
||||||||| ||||||| ||||||||||||||||| | |||||| ||||| |||||| |
Sbjct 270 GAAGATCAAAGATTGTACGGATGAAGGAACACTCGTTGCGATTCCAATCTTCTACAAGCT 329
Query 324 AGAGCCATCCACGGTGAAATATTTGATGGGAGACTTTGGTGATACATTCAGGAGTTTGGC 383
||||||||||| || | | |||||| ||| | || ||||||| ||| |||||| |||
Sbjct 330 GGAGCCATCCACCGTTAGAGATTTGAAAGGAAAGTTCGGTGATAGATTTAGGAGTATGG- 388
Query 384 CATGAATGAATATGATGAGGGGAAGGAGAAATGGGAA-GACGCTTTGAAGGTGGTTTGTG 442
| | || | ||||||| |||| |||||| |||| || ||||| || || || |
Sbjct 389 C-T-AA-G--GGTGATGAGAGGAAAAAGAAAT-GGAAGGAAGCTTTTAACTTGATTCCTA 442
Query 443 GTATAATGGGCACCGTGGTCGATGAA-AAAAGTGACGAGAGCGA-AATAGTaaaaaaaaC 500
|| ||||||| | | | || || ||||||| ||||| || || ||| || |||
Sbjct 443 ACATTATGGGCATCATCATTGA-CAAGAAAAGTGTGGAGAGTGAGAA-AGTCAATGAAAT 500
Query 501 TGTGGATGAC-ATTAGGAAAGCGCTGATCAGAATTCCATCGGAGGGAAGCCA-AATTACC 558
||| || | | | | || |||| ||| | |||| ||| |||||||||| || || ||
Sbjct 501 TGT-GAAGGCGGTGAAGACAGCGTTGACCGGAATACCACCGGAGGGAAGTCACAA-CGCC 558
Query 559 -TCTGTCAATCCTTCACCAAATAGGGACACTCGAACTTCCTCAGGGGA-AGAAAAGCATG 616
|| || | ||| | ||||| || || ||||||||||||| || | |||||||||
Sbjct 559 GTC-GTGGGTGCTTTAGGTAATAGCAACGCTGGAACTTCCTCAGGAGACA-AAAAGCATG 616
Query 617 AGACTTTTGGAAATGAATTACGCCTAAAGGAATTGGAAGAGAAATTGGATCGT-A-CAAT 674
||||||||||||| ||| ||| |||| || ||||||||||| ||||||||| | |||
Sbjct 617 AGACTTTTGGAAACGAACAACGGTTAAAAGATTTGGAAGAGAAGTTGGATCGTGATAAAT 676
Query 675 -CAAGAAAACTTGTATCATCGGAGTTGTTGGTATGCCTGGAATTGGTAAAACCACACTGC 733
|||| |||| ||||||| ||||||||||| ||||| |||||||||||||||||||| |
Sbjct 677 ACAAGGGAACTCGTATCATTGGAGTTGTTGGGATGCCCGGAATTGGTAAAACCACACTCC 736
Query 734 TGAAAGAGCTCTTTAAGAAGTGGCAGAATAAGTTTAATAGG--TGCGCATTAATCGATGA 791
|||||||||| | ||||| ||||||| |||||| ||| ||||| |||||||| |
Sbjct 737 TGAAAGAGCTATATAAGACGTGGCAGGGCAAGTTTTCGAGGCATGCGC--TAATCGATCA 794
Query 792 AATCCGTGGAAAGTCAAATCCCTCCGAGGATTTTGATATCTTGCC-CAAATTGCT-TGTA 849
|||||||| |||||| || | || ||| || ||| |||||| |||| |||| | ||
Sbjct 795 AATCCGTGTAAAGTCCAAGCACT---TGGAGTTGGATCGCTTGCCTCAAA-TGCTCT-TA 849
Query 850 CGAGAGTT-ACTAGCGTTTAATGTGTCCAC-CTTAGAAAATGTTGAAGACCCATACGAAG 907
| ||||| | | | |||| ||| | | |||| ||| | |||| |||||| |
Sbjct 850 GGCGAGTTGTCCA-AG-TTAAACCATCCTCACGTAGACAATCTCAAAGATCCATAC--A- 904
Query 908 TGTTTAAGGGTCTACTTCTCAACGAGAAAGTTCTTGTCATTCTTGACGATGTTAGTAAAA 967
| | || || | | |||| ||||| ||||| | ||||| |||||||||||||
Sbjct 905 -G-TCAA----CTGC--ATGAACG-CAAAGTGCTTGTTGTACTTGATGATGTTAGTAAAA 955
Query 968 GTGAACAGATAGACGCTCTTCTTGGGAAACGCGACTGGATT----A--CT---GAAGGAA 1018
| ||||| ||||| ||||||| || || || ||||||||| | | || ||||
Sbjct 956 GGGAACAAATAGATGCTCTTCGTGAGATACTAGACTGGATTAAGGAGGGTAAGGAGGGAA 1015
Query 1019 GCAGGATTGTCATTGCAACAAATGACATGTCCTT-ACTAAA-GGATTGGGTAACAGATAC 1076
||||| ||||||||||||||| ||||||||||| || ||| || |||| | | |||||
Sbjct 1016 GCAGGGTTGTCATTGCAACAAGCGACATGTCCTTAAC-AAATGGTTTGGTTGA-TGATAC 1073
Query 1077 TTACGTGG-TCCCGCTACTGAACCACCA-AGATGGCTTGA-AACT-TTTCCACTATCATG 1132
|||| ||| || | ||||||| || |||| |||| | |||| ||| ||||||||||
Sbjct 1074 TTACATGGTTCAAAAT-TTGAACCA-CAGAGATAGCTT-ACAACTATTT-CACTATCATG 1129
Query 1133 CC--T-TTGATG---AAGCTAATCCTC--CTG-AAGATTTCATGCAGCTTTCAAAAGAGT 1183
|| | |||||| |||| ||||||| | ||||||||||| |||| ||| ||| ||
Sbjct 1130 CCTTTATTGATGATCAAGCCAATCCTCAAAAGAAAGATTTCATGAAGCTGTCAGAAGGGT 1189
Query 1184 TTGTGCATTTTGCCAGAGGCCTTCCACTTGCTCTCAAAATATTGGGTAAAGAACTTTAT- 1242
|||| |||| |||||||||| |||||| || |||||| |||||||| ||| ||| ||
Sbjct 1190 TTGTACATTACGCCAGAGGCCATCCACTAGCCCTCAAAGTATTGGGTGGAGAGCTTAATA 1249
Query 1243 GGAAAGGGAAGGCTGCAGTGGGAA---GAAAAACGGAAGTTACTCGCAGAGAGTCCCAGC 1299
|||| | | || | || | |||| | |||| |||| ||| ||| |||| ||||||
Sbjct 1250 AGAAAAGTATGGAT-CA-TTGGAATTCG-AAAA-TGAAGAAACTTGCACAGAGCCCCAGC 1305
Query 1300 CCTTATATTGAAAGTGTCTTCCGAGTGAGTTATGATGAATTGAGTTCAGATCAGAAAAAA 1359
||| |||||| |||||||||| |||||||||||||||||||| | ||| |||||| |
Sbjct 1306 CCTAATATTGTCAGTGTCTTCCAAGTGAGTTATGATGAATTGACTACAGCGCAGAAAGAT 1365
Query 1360 GCATTTCTAGACATAGCTTGTTTCAGATCGCAGGATGTGGCTTATGTAGAAAGTTTACTT 1419
|||||||| |||||||| ||||||||||| ||||| || ||||||||||||| ||||
Sbjct 1366 GCATTTCTCGACATAGCCTGTTTCAGATCACAGGACAAGGATTATGTAGAAAGTCTACTG 1425
Query 1420 GC-T--TC--A-------T---CTGAAGCAATGAGTGCAGTAAAAGCTCTCACGGATAAG 1464
|| | || | | ||||||||||||||||||| ||| ||||||||||||||
Sbjct 1426 GCTTCATCTGACCTTGGTTCGGCTGAAGCAATGAGTGCAGTCAAATCTCTCACGGATAAG 1485
Query 1465 TTCCTGATTAATACTTGTGACGGTCGAGTGGAGATGCATGATCTACTGTATACATTTTCG 1524
|||||||||||||||||||| || ||||||||||||||||||||| | |||| ||||||
Sbjct 1486 TTCCTGATTAATACTTGTGATGGCCGAGTGGAGATGCATGATCTATTATATAAATTTTCA 1545
Query 1525 AGGGAACTTGATCCTAAAA-CATCCACTGAAGATGATCGCACAGGACGAAGGTTGTGGCG 1583
|||||| |||||| | || |||| | | | |||| | ||| | ||| ||| ||||||
Sbjct 1546 AGGGAAGTTGATC-TGAAGGCATCTAATCAGGATGGTAGCAGACAACGGAGGCTGTGGCT 1604
Query 1584 CCATCAAGACATAATCAAGGAAGGCAAAATTAATGTAGTGCAGAAAGAAA-TGAGAGCTG 1642
||||||| |||||||||||| ||||| ||| |||||| |||| ||| ||| ||| |||||
Sbjct 1605 CCATCAACACATAATCAAGGGAGGCATAATCAATGTATTGCA-AAATAAAATGAAAGCTG 1663
Query 1643 CCCATGTCAGAGGTATTTTCCTAGATTTGTCTCAAGTG-AAGGGCGAAACGAGGTTAG-C 1700
|| |||| ||||||||||||||||| |||||| ||||| ||| ||||||||| |||| |
Sbjct 1664 CCAATGTTAGAGGTATTTTCCTAGACTTGTCTGAAGTGGAAGA-CGAAACGAGCTTAGAC 1722
Query 1701 TAAAGATCACTTCA-ACCGTATGACTAATCTACGGTATCTCAAGGTCTATAATTCTCATT 1759
|| ||||||| | |||| ||||| |||||||||||| |||| ||||| ||||
Sbjct 1723 CGC-GACCACTTCATAAA-TATGGGAAATCTCCGGTATCTCAAGTTCTACAATTCCCATT 1780
Query 1760 GTCCTCAGGAATGTAAAACTGAA-AATAGGATTAACATCCCTGATGGACTTAAGCTACCA 1818
|||| |||||||||||||| || |||| || |||||||||||| |||||||||||||
Sbjct 1781 GTCCACAGGAATGTAAAACC-AACAATAAAATCAACATCCCTGATAAACTTAAGCTACCA 1839
Query 1819 TTGAAAGAGGTTCGATGCCTCCACTGGTTGAAATTCCCATTAGATGA-ACTTCCCGAA-G 1876
|||||||| |||||||||||||||||| ||||||||||||| || || |||||| || |
Sbjct 1840 TTGAAAGAAGTTCGATGCCTCCACTGGCTGAAATTCCCATTGGA-GACACTTCCA-AACG 1897
Query 1877 CTTTCAACCCGATTAATCTCGTCGACCTTAAGCTGCCATACAGTGAGATTGAACGACTTT 1936
||||||||| |||||||| ||||||||||||||||| |||||||| || |||| |||||
Sbjct 1898 ATTTCAACCCAATTAATCTTGTCGACCTTAAGCTGCCCTACAGTGAAATGGAACAACTTT 1957
Query 1937 GGGAGGGTGACAAGGATACACCA-GTCTTAAAATGGGTCGATCTCAATCACTCAAGTATG 1995
|||||||||||||||| |||||| | ||||| ||||||||||||||||||||||||| |
Sbjct 1958 GGGAGGGTGACAAGGACACACCATG-CTTAAGGTGGGTCGATCTCAATCACTCAAGTAAG 2016
Query 1996 TTGAGCAGCTTGTCAGGATTATCAAAGGCTCCAAATCTTCAA-GGACTGAACCTTGAAGG 2054
||| ||||||||||||| |||||||| ||| ||| |||||| || |||||||||||||
Sbjct 2017 TTGTGCAGCTTGTCAGGGTTATCAAAAGCTGAAAAGCTTCAAAGGT-TGAACCTTGAAGG 2075
Query 2055 GTGCACA 2061
||||||
Sbjct 2076 TTGCACA 2082
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 176988974904
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5