BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915663
Length=4083
Score E
Sequences producing significant alignments: (Bits) Value
AT5G45050.1 | Symbols: TTR1, ATWRKY16, WRKY16 | Disease resista... 3380 0.0
AT5G45260.1 | Symbols: RRS1, ATWRKY52, SLH1 | Disease resistanc... 2213 0.0
AT5G17890.1 | Symbols: CHS3, DAR4 | DA1-related protein 4 | chr... 401 2e-110
AT2G34830.1 | Symbols: WRKY35, MEE24, AtWRKY35 | WRKY DNA-bindi... 285 2e-75
> AT5G45050.1 | Symbols: TTR1, ATWRKY16, WRKY16 | Disease resistance
protein (TIR-NBS-LRR class) | chr5:18176914-18181805 REVERSE
LENGTH=4221
Length=4221
Score = 3380 bits (1830), Expect = 0.0
Identities = 2337/2577 (91%), Gaps = 53/2577 (2%)
Strand=Plus/Plus
Query 1 ATGGCCGATAGTGAGCAATTGGTCTGCATCAGCTGCGTATCTGAGGTACGGTACTCTTTC 60
||| |||| ||||||||| | |||| |||||||||| || |||||||| ||||| |||
Sbjct 1 ATGACCGAGAGTGAGCAAATCGTCTACATCAGCTGCATAGAGGAGGTACGATACTCCTTC 60
Query 61 GTGAGCCACCTCTCCGAAGCTCTCC-GCCGGAAAGGCATAAGTAGTG-TGATCATAGATG 118
|| |||||||||||| ||||||||| | || ||||| ||| | | || || | |
Sbjct 61 GTCAGCCACCTCTCCAAAGCTCTCCAG-CGAAAAGGTGTAA--A-CGATG-TC-TTCA-- 112
Query 119 TAGATAGCGATGA-TCTGCTTTCCAAGGAGTCGCAGGCAAAGATCGAGATATCTAGGGTT 177
| ||||||||||| || ||||||||| ||||| || ||| | |||||| | ||||||||
Sbjct 113 TCGATAGCGATGATTC-GCTTTCCAACGAGTCTCAATCAATGGTCGAGAGAGCTAGGGTT 171
Query 178 TCTGTGATGGTTTTATCCA-GAATCTGTGA-GCCAACTAGAGTATGCCAAAACTTCGTGA 235
||||| ||| ||||| ||| ||| | || | | | || | || | || | ||||||
Sbjct 172 TCTGTTATGATTTTA-CCAGGAAACCGT-ACGGTATCT---CT-TGAC-AAGC-TCGTGA 223
Query 236 ATGTTATCGAGTGCCAGAGGAAC-AAGAACCAGGTGGTGGTTCCGGTGTTGTACGGTGAT 294
| ||| |||| ||||||| |||| ||| | || ||||||||||||||||||||||||| |
Sbjct 224 AGGTTCTCGATTGCCAGAAGAACAAAG-ATCAAGTGGTGGTTCCGGTGTTGTACGGTG-T 281
Query 295 -AG-TCCATTACAGGGCGAATGGCTCAGCGTGCTGGATTTGAGA-GATTTATC-TCCAGT 350
|| | ||| | || ||||||||| |||| |||||||| || | || || || | ||||
Sbjct 282 CAGAT-CATCAGAGACCGAATGGCTTAGCGCGCTGGATTCGAAAGGA-TTCTCAT-CAGT 338
Query 351 TCACCAATCCAGGAAGGACTGTAGTGACTCCCAATTTGTAAAAGAGATTGTCAAAGATGT 410
||||| |||||||| || |||||||||||||| |||||||||||| ||| | ||||||
Sbjct 339 ACACCATTCCAGGAAAGAATGTAGTGACTCCCAGCTTGTAAAAGAGACTGTTAGAGATGT 398
Query 411 GTATGAGAAGCTCTTTTATATGGAACGGATTGGAATCTATTCAAAGCTGCTGGAGATTGA 470
||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct 399 GTATGAGAAGCTCTTTTATATGGAACGAATTGGAATATATTCGAAGCTGCTGGAGATTGA 458
Query 471 GAAAATGGTTTGCAAGCAACCGTTGGGCATCCGTTGTGTTGGAATTTGGGGTATGCCTGG 530
||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 459 GAAAATGATTAACAAGCAACCGTTGGACATCCGTTGTGTTGGAATTTGGGGTATGCCTGG 518
Query 531 CATAGGCAAGACGACACTTGCTAAAGCGGTCTTTGACCAAATGTCTGGCGAATTTGATGC 590
|||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct 519 CATAGGCAAGACTACACTTGCTAAAGCAGTCTTTGACCAAATGTCTGGTGAGTTTGATGC 578
Query 591 TTC-TTGTTTTATCGAAGACTATAGCAAAGCTATTCAAGAGAAGGGTGTTTATTGTTTGC 649
|| ||| ||||| |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 579 -TCATTGCTTTATTGAAGACTACACCAAAGCTATTCAAGAGAAGGGTGTTTATTGTTTGC 637
Query 650 TGGAGGAACAGTTTTTGAAAGAAAATGCTGGTGGTGCTGGTGGTACCGTTACGAAACTGA 709
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||
Sbjct 638 TGGAGGAACAGTTTTTGAAAGAAAATGC---TGGTGCTAGTGGTACCGTTACGAAATTGA 694
Query 710 GCTTGCTTAGAAACAAATTAAACAATCAGAGGGTTCTTGTTGTTCTTGATGATGTGCGCA 769
|||||||||| | | |||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 695 GCTTGCTTAGGGATAGATTAAACAATAAGAGGGTTCTTGTTGTTCTTGATGATGTCCGCA 754
Query 770 GTCCTCTGGTTGTGGAGTCTTTTCTTGGAGGGTTTGACTGGTTTGGTCCCAAAAGCCTAA 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 755 GTCCTCTGGTTGTGGAGTCTTTTCTTGGAGGGTTTGACTGGTTTGGTCCCAAAAGTCTAA 814
Query 830 TCATCATAACCTCTAGAGATAAA-CAGGTGTTTCGCCTTTGTCGAGTCGATCAAATATAT 888
||||||||||||| | ||||||| | |||||||||||||||||||||| ||||||||||
Sbjct 815 TCATCATAACCTCCAAAGATAAATC-GGTGTTTCGCCTTTGTCGAGTCAATCAAATATAC 873
Query 889 GAGGTTCTGGGTTTAAATGAGAAAGAGGCTCTTCAGCTCTTCTCTTTTTGTGCGTCTATA 948
||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 874 GAGGTTCAGGGTTTAAATGAGAAAGAGGCTCTTCAACTCTTCTCTTTGTGTGCGTCTATA 933
Query 949 GACGATATGGCAGAGCAGAGTCTCCATGAGGTGTCAATGAAAGTGGTTAAGTATGCGAGT 1008
||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||| | |
Sbjct 934 GACGATATGGCAGAGCAGAATCTCCACGAGGTGTCAATGAAAGTTATTAAATATGCTAAT 993
Query 1009 GGACATCCATTAGCTCTCAGTCTCTATGGCAGAGAGCTGAAGGGTaaaaaaaCACTGCCA 1068
|| |||||||||||||||| ||||||||||||||| |||| ||| || |||| || |||
Sbjct 994 GGCCATCCATTAGCTCTCAATCTCTATGGCAGAGAACTGATGGGGAAGAAAAGACCACCA 1053
Query 1069 GAAATGGAGACAACATTCCTCGAACTCAAGGAACATCCTCCAACTATGTTTGTTGATGCA 1128
|||||||||| | |||||||| ||||||||||| ||||||| |||| ||||||||||||
Sbjct 1054 GAAATGGAGATAGCATTCCTCAAACTCAAGGAATGTCCTCCAGCTATTTTTGTTGATGCA 1113
Query 1129 ATCAAGAGCTGC-TATGACACACTCAATGACAGGGaaaaaaaCATTTTCTTGGACATAGC 1187
|||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1114 ATCAAGAGCT-CGTATGACACACTCAATGACAGGGAAAAAAACATTTTTTTGGACATAGC 1172
Query 1188 TTGTTTCTTTGAGGGAGAAAATGTCGACTACGTGATGCAACTGCTTGAGGGTTGTGGTTT 1247
||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1173 TTGTTTCTTCCAGGGAGAAAATGTTGACTACGTGATGCAACTGCTTGAGGGTTGTGGTTT 1232
Query 1248 CTTTCCACATGTTGGAATTGATGTTCTTGTCGAGAAGTGTCTGGTGACTATTACAGAAAA 1307
|||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||
Sbjct 1233 CTTTCCACATGTTGGAATTGATGTTCTTGTGGAGAAGAGTCTGGTGACTATTTCAGAAAA 1292
Query 1308 CCAAGTGCGGATGCATAACTTGATCCAAAATGTTGGCCGACAAATAATAAATAGAGAAAC 1367
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1293 CCGAGTGCGGATGCATAACTTGATCCAAGATGTTGGCCGACAAATAATAAATAGAGAAAC 1352
Query 1368 AAGACAGACTAAGAGGCGCGA-CAGACTGTGGGAACCTTGGAGCATCAAATATTTATTAG 1426
||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||
Sbjct 1353 AAGACAGACTAAGAGGCGC-AGCAGACTGTGGGAACCTTGCAGCATCAAATATTTATTAG 1411
Query 1427 AAGATAACGG-AGAAAAAGAAAATGGAGAACACAAAACAACTTTGGAACGTGCTCAGGGC 1485
||||||| || | |||| ||||||| |||||| ||||||||||| ||||||||||||| |
Sbjct 1412 AAGATAA-GGAACAAAACGAAAATGAAGAACAAAAAACAACTTTTGAACGTGCTCAGGTC 1470
Query 1486 CCTGAAGAGATCGAAGGCATGTTTCTGGACACATCAAACTTTAGTTTTGATATTAAGCCT 1545
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1471 CCTGAAGAGATCGAAGGCATGTTTCTGGACACATCAAACTTAAGTTTTGATATTAAGCAT 1530
Query 1546 GCTGCCTTTGATAATATGTTGAACCTTAGATTGCTCAAGATTTACAGTTCCAATCCTGAA 1605
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1531 GTTGCCTTTGATAATATGTTGAACCTTAGATTGTTCAAGATTTACAGTTCCAATCCTGAA 1590
Query 1606 GTCCATCATGTAAAGAATTTCCTCAAAGGCTCTCTCAATTCTCTTCCTAATGAGCTAAGA 1665
|||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1591 GTCCATCATGTAAACAATTTCCTCAAAGGCTCTCTCAGTTCTCTTCCTAATGTGCTAAGA 1650
Query 1666 CTCCTCCATTGGGAGAACTATCCTCTGCAGTTTCTGCCCCAAAATTTTGATCCTATACAC 1725
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1651 CTCCTGCATTGGGAGAACTATCCTCTGCAGTTTCTGCCTCAAAATTTTGATCCTATACAC 1710
Query 1726 CTTGTTGAAATCAACATGCCGTACAGCCAACTTAAGAAACTTTGGGGTGGAACCAAGAAC 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1711 CTTGTTGAAATCAACATGCCGTACAGCCAACTTAAGAAACTTTGGGGTGGAACCAAGGAC 1770
Query 1786 CTGGAGATGTTGAAAACTATCAGGCTTTGTCATTCCCAGCAACTAGTTGATATTGACGAT 1845
|||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1771 CTGGAGATGTTGAAGACAATCAGGCTTTGTCATTCCCAACAACTAGTTGATATTGACGAT 1830
Query 1846 GTTTTAAAAGCTCAAAATCTTGAGGTAATTGATCTCCAAGGTTGTACAAGACTGCAGAGT 1905
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 1831 CTTTTAAAAGCTCAAAATCTTGAGGTAGTTGATCTCCAAGGCTGTACAAGACTGCAGAGT 1890
Query 1906 TTCCCAGCCACAGGTCAATTGCTACATCTACGAACTGTAAATCTCTCTGGTTGCACAGAG 1965
||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||
Sbjct 1891 TTCCCAGCCACCGGTCAATTGCTACATTTACGAGTTGTAAATCTCTCAGGTTGCACAGAG 1950
Query 1966 ATCAAAAGTTTCCCAGAGATTCCCCCAAATATTGAGACACTGAATCTACAGGGGACTGGT 2025
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1951 ATCAAAAGTTTCCCAGAAATTCCCCCAAATATTGAGACACTGAATCTACAGGGGACTGGT 2010
Query 2026 ATAATAGAATTACCACTTTCCATTATTAAGCCAAACTACACAGAGCTTTTGAATCTTCTA 2085
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 2011 ATAATAGAATTACCACTTTCCATTGTTAAGCCAAACTACAGAGAGCTTTTGAATCTTCTA 2070
Query 2086 GCTGAAATCCCGGGTCTTTCAGGAGTCTCAAACCTTGAGCAAAGTGATCTCAAACCTTTA 2145
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2071 GCTGAAATCCCGGGTCTTTCAGGTGTCTCAAACCTTGAGCAAAGTGATCTCAAACCTTTA 2130
Query 2146 ACAAGCCTGATGAAAATGAGCACATCTAATCAAAATCTTGGCAAGCTTATTTGCTTGGAG 2205
||||||||||||||||| ||||||||| | ||||||| ||||||||||| ||||||||||
Sbjct 2131 ACAAGCCTGATGAAAATTAGCACATCTTACCAAAATCCTGGCAAGCTTAGTTGCTTGGAG 2190
Query 2206 CTGAAAGATTGTGCTCGTTTGCGAAGTCTGCCAAACATGAATAATTTAGAACTTCTCAAA 2265
||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2191 CTGAATGATTGTTCTCGTTTGCGAAGTCTGCCAAACATGGTTAATTTAGAACTTCTCAAA 2250
Query 2266 GTTCTTGATCTTTCTGGTTGCTCAGAGCTCGAGACTATCCAGGGTTTCCCACAGAACCTG 2325
| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2251 GCCCTTGATCTTTCTGGTTGCTCAGAGCTCGAGACTATCCAGGGTTTCCCACGGAACCTG 2310
Query 2326 AAAGAGTTATATCTTGCTGGCACTGCAGTAAGACAAGTGCCACAACTTCCTCAAAG-CTT 2384
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2311 AAAGAGTTATATCTTGTTGGCACTGCAGTAAGACAAGTGCCACAACTTCCTCAAAGTCT- 2369
Query 2385 AGAACTCTTTAATGCACATGGTTGTGTCTCTCTCAAGTCAATTCGCGTGGACTTCGAGAA 2444
|||| |||||||||| |||||||||||||||||||| |||||||| |||||||| ||||
Sbjct 2370 AGAATTCTTTAATGCCCATGGTTGTGTCTCTCTCAAATCAATTCGTTTGGACTTCAAGAA 2429
Query 2445 GCTTCCTGTGCATTACACACTTAGTAATTGTTTTGATCTCTGTCCAAAAGTGGTCAGCGA 2504
||||||||||||||||||| ||||||||||||| ||||| | |||| ||||||||| |||
Sbjct 2430 GCTTCCTGTGCATTACACATTTAGTAATTGTTTCGATCTATCTCCACAAGTGGTCAACGA 2489
Query 2505 TTTTTTAGTGCAAGCGCTGGCTAATGCGA----AA--CGCATACCAAGAGAGCATCA 2555
|||||||||||| ||| ||||||||| || || | |||||||||||||| |||
Sbjct 2490 TTTTTTAGTGCAGGCGATGGCTAATGTGATTGCAAAACACATACCAAGAGAGCGTCA 2546
Score = 1975 bits (1069), Expect = 0.0
Identities = 1389/1540 (90%), Gaps = 36/1540 (2%)
Strand=Plus/Plus
Query 2553 TCAACAGGAACTCAACAAAACTTTGGCTTTCAGCTTCTGTGCGCCCTCACATGCGAATCA 2612
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2595 TCAGCAGGAACTCAACAAAACTTTGGCTTTCAGCTTCTGTGCGCCCTCACATGCGAATCA 2654
Query 2613 AAATTCCAAACTTGATCTGCAACTAGGATCTTCTGT-AATGACACGACTAAATCCTTCTT 2671
||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||
Sbjct 2655 AAATTCCAAACTTGATCTGCAACCAGGATCTTCT-TCAATGACACGACTAGATCCTTCTT 2713
Query 2672 GGAGGAACACACTTGTGGGCTTTGCTATGCTGGTGGAAGTCGCATTTTCGGAGGATTACT 2731
||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||
Sbjct 2714 GGAGGAACACACTTGTGGGCTTTGCTATGCTGGTGCAAGTCGCATTTTCCGAGGGTTACT 2773
Query 2732 ATGATGCTACTGGTTTTGGCATTAGTTGTGTTTGCAGATGGAAAAACAAGGAAGGCCACT 2791
||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2774 GTGATGATACTGATTTTGGCATTAGTTGTGTTTGCAAATGGAAAAACAAGGAAGGCCACT 2833
Query 2792 CTCATAGGATAGAAAGAAATTTGCATTGTTGGGCTCTAGGGAAAGCTGTTCAAAAGGATC 2851
||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||| |||||
Sbjct 2834 CTCATAGGAGAGAAATAAATTTGCATTGTTGGGCTTTAGGGAAAGCTGTTGAAAGGGATC 2893
Query 2852 ATATGTTTGTCTTCTGTGATGACAACTTGCGTCCA-AGTACTGATGAAGGAATTGACCCC 2910
||| ||||||||||| ||||| |||| |||||||| | ||| |||||||||| |||||||
Sbjct 2894 ATACGTTTGTCTTCTTTGATGTCAACATGCGTCCAGA-TACCGATGAAGGAAATGACCCC 2952
Query 2911 GATATCTGGGCTGATTTAGTTGTCTTTGAGTTCTTTCCTGTCAACAATCAGACAAGGCTT 2970
||||||||||||||||||||||| |||||||||||||||||||| || |||| || || |
Sbjct 2953 GATATCTGGGCTGATTTAGTTGTTTTTGAGTTCTTTCCTGTCAATAAACAGAGAAAGCCT 3012
Query 2971 CTAGGTGATAGTTGCACAGTGACAAGATGTGGAGTCCGTGTAATAACTCCTCCAAACTGC 3030
||| |||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct 3013 CTAAATGATAGTTGCACAGTGACAAGATGTGGAGTCCGTTTAATAACTGCTGTAAACTGC 3072
Query 3031 AATACAAGTCTCGAGA-TATCATCGTCAGTTTTGTCCTTAGATCCGATGGAGGTTTCTGG 3089
||||||||| |||||| ||| ||| ||||||||||||| ||||||||||||||||||||
Sbjct 3073 AATACAAGTATCGAGAATAT-ATCACCAGTTTTGTCCTTGGATCCGATGGAGGTTTCTGG 3131
Query 3090 TAATGAAGGTGAAGAAGTATTGAGAGTCAGTTATGATGGTTTACAGGAGATAGATAAAGC 3149
|||||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||
Sbjct 3132 TAATGAAGATGAAGAAGTATTGAGAGTCAGATATGCTGGTTTACAGGAGATATATAAAGC 3191
Query 3150 TTTATTTCTTTACTTAGCAGGTTTGTTCAATGACGAGGATGTTGATTTGGTGGCACCACT 3209
||| ||||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||
Sbjct 3192 TTTGTTTCTTTACATAGCGGGTTTGTTCAATGACGAGGATGTTGGTTTGGTAGCACCACT 3251
Query 3210 TATTGCTAACAGTATTGACATGGACGTCAGTTATGGGCTCAAGGTCTTAGCCGATAGGTC 3269
||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 3252 TATTGCTAACATTATTGACATGGACGTTAGTTATGGGCTCAAGGTCTTAGCCTATAGGTC 3311
Query 3270 TCTCATACGTGTATCTTCCAATGGGGAAATAGTGATGTACAATTTGCAACAAGAAATGGG 3329
||||||||||||||||||||||||||||||||||||| || |||||| || | |||||||
Sbjct 3312 TCTCATACGTGTATCTTCCAATGGGGAAATAGTGATGCACTATTTGCTACGACAAATGGG 3371
Query 3330 TAAAGAAATCCTCCATACAGAATCAAAGAAGACTGACAGATTGGTCGACAATAGTCAGAG 3389
|||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||
Sbjct 3372 TAAAGAAATCCTCCATACAGAATCAAAGAAGACTGACAAATTAGTCGACAATATTCAGAG 3431
Query 3390 TTCCATGATCG-ATTCAAAGGAAATCGAGATCACTCATTCAAAGAATCGCCGAAAGAAGA 3448
||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||| |
Sbjct 3432 TTCCATGATCGCAA-CAAAGGAAATCGAGATCACTCGTTCAAAGAGTCGCCGAAAGAACA 3490
Query 3449 GCAGGGCAAAGAAAGTGGTTCGCGTACTGGATCCAGGCAGCCGGTCCAGTGAAGAAGTAG 3508
|| || ||||| ||||||| ||||| |||||| ||||||||||||||||||
Sbjct 3491 ACAAGGAAAAGAGAGTGGTTTGCGTAGTGGATCGAGGCAGCCGGTCCAGTGA-------- 3542
Query 3509 CTGACCTATGGGTTTGGCGAAAGTACGGTAAAAAACCCCTCAAAGGTTCTCCTTATCCAA 3568
| | ||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||
Sbjct 3543 C---C-TATGGGTTTGGCGAAAGTATGGTCAAAAACCCATCAAAAGTTCTCCTTATCCAA 3598
Query 3569 GGAATTACTACAAATGTACCAGCTCGAAAGGTTGTTCAGCTAGGAAACAAATCGAACGTA 3628
||| |||||| | |||| |||||||||||||||||| |||||||||||| |||||||||
Sbjct 3599 GGAGTTACTATAGATGTGCCAGCTCGAAAGGTTGTTTTGCTAGGAAACAAGTCGAACGTA 3658
Query 3629 GCCGCACCGATCCAAACATGTT--AGTCATTACTTACATCACTGAGCATAACCATCCATC 3686
||||||| |||||||| |||| ||| |||||||||||| ||||||||||||||||||
Sbjct 3659 GCCGCACTGATCCAAA--TGTTTCAGTAATTACTTACATCTCTGAGCATAACCATCCATT 3716
Query 3687 CCCCACTCAACGCAATGCTCTTGCCGGCTCCACTCATTCCCCGTCATCCTCCAAATGCTC 3746
|||||||| ||||||| |||||||||||||||||| |||| | | ||||||||||||||
Sbjct 3717 CCCCACTCTACGCAATACTCTTGCCGGCTCCACTCGTTCCTC-T--TCCTCCAAATGCTC 3773
Query 3747 AGCTGTAACTACTTCTGACTCAT-GTAGAGTCTCCCAACACAAAGACGAACCGGATAAAT 3805
|| |||||||||||||| ||||| | | |||||||||| ||||||| | |||||||||||
Sbjct 3774 AGATGTAACTACTTCTGCCTCATCG-ACAGTCTCCCAAGACAAAGAAGGACCGGATAAAT 3832
Query 3806 CCCATTTGCCTTCCTCTCCC-GCTTCTCCTCCTTATGCGGCCATGGTGATTAAGGAGGAG 3864
|||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 3833 CCCATTTGCCTTCCTC-CCCTGCTTCTCCTCCTTATGCGGCCATGGTGGTTAAGGAGGAG 3891
Query 3865 GACATGGAGCGACGGGACAATATGGAGTTCGATGATGACGTTGAAGA---TACCTTCGTA 3921
|||||||||| | ||||||||||||||||||||| |||||||||||| ||| ||| ||
Sbjct 3892 GACATGGAGCAATGGGACAATATGGAGTTCGATGTTGACGTTGAAGAAGATACTTTCATA 3951
Query 3922 CCGGAATTATTTCCAGAGGATATCTTTGCTGATCTGGACAAGCTTGAGTCGAATTCTCAG 3981
|| ||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||
Sbjct 3952 CCCGAATTATTTCCAGAGGATACCTTCGCTGATATGGACAAGCTTGAGGAAAATTCTCAG 4011
Query 3982 ACTATGTTTCTCGCTCACAGTAGCAGCGGAGGCAACATGGAAAACCAAGGGCGGAACTCT 4041
|||||||||||| ||| ||| ||||||||||||||||||||| ||||||| |||||||
Sbjct 4012 ACTATGTTTCTCTCTCGCAGAAGCAGCGGAGGCAACATGGAAGCCCAAGGGAAGAACTCT 4071
Query 4042 AGTGATGATATGGG-GGTCAATTTACCTAATAAAACTCTG 4080
|||||||||| ||| |||||||||||||| ||||| ||||
Sbjct 4072 AGTGATGATA-GGGAGGTCAATTTACCTAGTAAAATTCTG 4110
> AT5G45260.1 | Symbols: RRS1, ATWRKY52, SLH1 | Disease resistance
protein (TIR-NBS-LRR class) | chr5:18326203-18332609 FORWARD
LENGTH=4321
Length=4321
Score = 2213 bits (1198), Expect = 0.0
Identities = 2038/2432 (84%), Gaps = 103/2432 (4%)
Strand=Plus/Plus
Query 12 TGAGCAATTGGTCTGCATCAGCTGCGTATCTGAGGTACGGTACTCTTTCGTGAGCCACCT 71
|||| |||| || ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 95 TGAGGAATTCGTGTGCATCAGCTGCGTAGAAGAGGTACGGTACTCTTTCGTGAGCCACCT 154
Query 72 CTCCGAAGCTCTCCGCCGGAAAGGCATAAGTAGTGTGATCATAGATGTAGATAGCGATGA 131
||| ||||||||||| || |||||||||| || |||| || |||||||||||| ||||||
Sbjct 155 CTCTGAAGCTCTCCGTCGAAAAGGCATAAATAATGTGGTCGTAGATGTAGATATCGATGA 214
Query 132 TCTGCTTTCCAAGGAGTCGCAGGCAAAGATCGAGATATCTAGGGTTTCTGTGATGGTTTT 191
|||||||| ||||||||| |||||||||||||||| | || |||||||||||||||||||
Sbjct 215 TCTGCTTTTCAAGGAGTCTCAGGCAAAGATCGAGAAAGCTGGGGTTTCTGTGATGGTTTT 274
Query 192 ATCCAGAATCTGTGAGCC-AACTAGAGTAT-GC--CAAAACTTCGTGAATGTTATCGAGT 247
| || ||| |||||| || | || |||| || | || |||| || ||| ||||||
Sbjct 275 ACCCGGAAACTGTGATCCTTCCGAG-GTATGGCTTGACAAGTTCGCCAAGGTTCTCGAGT 333
Query 248 GCCAGAGG---AACAAGAACCAGGTGGTGGTTCCGGTGTTGTACGGTGATAGTCCATTAC 304
|||| ||| |||||| |||||| ||||||| | |||||||||||||| |||| |||||
Sbjct 334 GCCAAAGGAACAACAAGGACCAGGCGGTGGTTTCAGTGTTGTACGGTGACAGTCTATTAC 393
Query 305 AGGG-CGAATGGCTCAGCGTGCTGGATTTGAGAGATTTATCTCCAGTTCACCAATCCAGG 363
||| | ||||||| |||| ||||||||| |||| ||||| | | ||||||||||||||
Sbjct 394 -GGGACCAATGGCTTAGCGAGCTGGATTTCAGAGGCTTATCACGAATTCACCAATCCAGG 452
Query 364 AAGGACTGTAGTGACTCCCA-ATTTGTAAAAGAGATTGTCAAAGATGTGTATGAGAAGCT 422
||||| |||||||||| | | | ||||| |||||||||| | ||||||||| |||| ||
Sbjct 453 AAGGAATGTAGTGACT-CTATACTTGTAGAAGAGATTGTGAGAGATGTGTACGAGACGCA 511
Query 423 CTTTTAT-ATGGAACGGATTGGAATCTATTCAAAGCTGCTGGAGATTGAGAAA-ATGGTT 480
||||||| ||| ||| |||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct 512 CTTTTATGTTGG-ACGAATTGGAATCTATTCGAAGCTGCTGGAGATTGA-AAACATGGTT 569
Query 481 TGCAAGCAACCGTTGGGCATCCGTTGTGTTGGAATTTGGGGTATGCCTGGCATAGGCAAG 540
|||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 570 AACAAGCAACCGATAGGCATCCGTTGTGTTGGAATTTGGGGTATGCCTGGCATAGGAAAG 629
Query 541 ACGACACTTGCTAAAGCGGTCTTTGACCAAATGTCTGGCGAATTTGATGCTTCTTGTTTT 600
|| |||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||
Sbjct 630 ACAACACTTGCTAAAGCAGTCTTTGACCAAATGTCTAGCGCCTTTGATGCTTCTTGTTTT 689
Query 601 ATCGAAGACTATAG-CAAAGCTATTCAAGAGAAGGGTGTTTATTGTTTGCTGGAGGAACA 659
|||||||||||| | |||| | ||||| ||||||||| ||||||||||||||||||||||
Sbjct 690 ATCGAAGACTAT-GACAAATCAATTCATGAGAAGGGTCTTTATTGTTTGCTGGAGGAACA 748
Query 660 GTTTTTGAAAGAAAATGCTGGTGGTGCTGGTGGTACCGTTACGAAACTGAGCTTGCTTAG 719
||| ||| | || || || ||| ||| ||||||||||| ||| ||
Sbjct 749 -ACTTT---------TGC-CG-GGCAATGATGCAACCATTATGAAACTGAGCTCGCTCAG 796
Query 720 AAACAAATTAAACAATCAGAGGGTTCTTGTTGTTCTTGATGATGTGCGCAGTCCTCTGGT 779
| ||| ||| |||| | |||| |||||||||||||| ||||| ||||||| | |||||||
Sbjct 797 AGACAGATTGAACAGTAAGAGAGTTCTTGTTGTTCTCGATGACGTGCGCAATGCTCTGGT 856
Query 780 TGTGGAGTCTTTTCTTGGA-GGGTTTGACTGGTTTGGTCCCAAAAGCCTAATCATCATAA 838
|| |||||| |||| | || |||||||||||| | || ||| |||||| ||||||||||
Sbjct 857 TGGGGAGTCCTTTC-TCGAGGGGTTTGACTGGCTAGGACCCGGAAGCCTGATCATCATAA 915
Query 839 CCTCTAGAGATAAACAGGTGTTTCGCCTTTGTC-GAGTCGATCAAATATATGAGGTTCTG 897
|||||||||||||||| |||||| ||||||| | || || |||||||||||||||| | |
Sbjct 916 CCTCTAGAGATAAACAAGTGTTTTGCCTTTG-CGGAATCAATCAAATATATGAGGTCCAG 974
Query 898 GGTTTAAATGAGAAAGAGGCTCTTCAGCTCTTCTCTT--TTTGTGCGTCTAT--A-GACG 952
|||||||||||||||||||||| ||| || || |||| | | ||||||||| | || |
Sbjct 975 GGTTTAAATGAGAAAGAGGCTCGTCAACT-TT-TCTTGCTGTCTGCGTCTATAAAGGAGG 1032
Query 953 ATATGGCAGAGCAGAGTCTCCATGAGGTGTCAATGAAAGTGGTTAAGTATGCGAGTGGAC 1012
|||||| |||||||| |||||| ||| ||||| ||| ||| | || ||||| | ||||
Sbjct 1033 ATATGGGAGAGCAGAATCTCCAGGAGTTGTCAGTGAGAGTAATAAATTATGCTAATGGAA 1092
Query 1013 ATCCATTAGCTCTCAGTCTCTATGGCAGAGAGCTGAAGGGTaa-aaaaaCACTGC-CAGA 1070
| || |||||| ||||| | ||||| ||||||||||| ||||| ||||| ||| | ||||
Sbjct 1093 ACCCGTTAGCTATCAGTGTTTATGGAAGAGAGCTGAAAGGTAAGAAAAA-ACT-CTCAGA 1150
Query 1071 AATGGAGACAACATTCCTCGAACTCAAG-GAACATCCTCCAACTATGTTTGTTGATGCAA 1129
||||||||| |||||||| |||||||| | || ||||||| || | |||| ||||||
Sbjct 1151 AATGGAGACTGCATTCCTCAAACTCAAGCG-ACGTCCTCCATTTAAGATTGTCGATGCAT 1209
Query 1130 TCAAGAGCTGCTATGACACACTCAATGACAGGGaaaaaaaCATTTTCTTGGACATAGCTT 1189
| || ||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||
Sbjct 1210 TTAAAAGCACCTATGACACACTCAGTGACAACGAAAAGAACATTTTTTTGGACATAGCTT 1269
Query 1190 GTTTCTTTGAGGGAGAAAATGTCGACTACGTGATGCAACTGCTTGAGGGTTGTGGTTTCT 1249
||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 1270 GTTTCTTCCAGGGAGAAAATGTCAACTACGTGATACAACTGCTTGAGGGTTGTGGTTTCT 1329
Query 1250 TTCCACATGTTGGAATTGATGTTCTTGTCGAGAAGTGTCTGGTGACTATTACAGAAAACC 1309
|||||||||||| ||||||||| ||||| || ||||||||||| |||||| |||||||||
Sbjct 1330 TTCCACATGTTGAAATTGATGTCCTTGTTGACAAGTGTCTGGTAACTATTTCAGAAAACC 1389
Query 1310 AAGTGCGGATGCATAA-CTTGATCCAAAATGTTGGCCGACAAATAATAAATAGAGAAACA 1368
||| || ||||||| | ||| ||| || | |||||| |||| |||||| |||||||
Sbjct 1390 GAGTTTGGTTGCATAAGC-TGACCCAGGATATCGGCCGAGAAATCATAAATGGAGAAAC- 1447
Query 1369 AG-ACAGACT-AAGAGGCGC-GACAGACTGTGGGAACCTTGGAGCATCAAATATTTATTA 1425
|| ||||| | |||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1448 AGTACAGA-TCGAGAGGCGCAGA-AGACTGTGGGAACCTTGGAGCATCAAATATTTATTA 1505
Query 1426 GAAGATAACGGAGAAAAAGAAAATGGAGAACAC-AAAACAACTTTGGAACGTGCTCAGGG 1484
||| |||| | | | |||| ||||||||||| | |||||||| || |||||||||||||
Sbjct 1506 GAATATAATGAACACAAAGCAAATGGAGAAC-CTAAAACAACCTTCAAACGTGCTCAGGG 1564
Query 1485 CCCTGAAGAGATCGAAGGCATGTTTCTGGACACATCAAACTTTAGTTTTGATATTAAG-C 1543
| ||||||||||||||||| ||||||| |||||||||||||| || |||||| | || |
Sbjct 1565 CTCTGAAGAGATCGAAGGCCTGTTTCTAGACACATCAAACTTAAGATTTGATCTGCAGCC 1624
Query 1544 CTGCTGCCTTTGATAATATGTTGAACCTTAGATTGCTCAAGATTTACAGTTCCAATCCTG 1603
|| |||||||| | |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1625 CT-CTGCCTTTAAGAATATGTTGAACCTTAGATTGCTCAAAATTTATTGTTCCAATCCTG 1683
Query 1604 AAGTCCATCATGTAAAGAATTTCCTCAA-AGGCTCTCT-CAATTCTCTTCCTAATGAGCT 1661
||||||||| ||||| ||||||| ||| ||||||||| | |||||||||||||||||||
Sbjct 1684 AAGTCCATCCTGTAATCAATTTCC-CAACAGGCTCTCTGC-ATTCTCTTCCTAATGAGCT 1741
Query 1662 AAGACTCCTCCATTGGGAGAACTATCCTCTGCAGT-TTCTGCCCCAAAATTTTGATCCTA 1720
||||||||||||||||||||||||||||||| | | || |||| || ||||||||||| |
Sbjct 1742 AAGACTCCTCCATTGGGAGAACTATCCTCTGAAATCTT-TGCCTCAGAATTTTGATCCAA 1800
Query 1721 TACACCTTGTTGAAATCAACATGCCGTACAGCCAACTTAAGAAACTTTGGGGTGGAACCA 1780
|||||||| ||||||||||||||||| || |||||| |||||||||||||||||||||
Sbjct 1801 GGCACCTTGTCGAAATCAACATGCCGTATAGTCAACTTCAGAAACTTTGGGGTGGAACCA 1860
Query 1781 AGAACCTGGAGATGTTGAAAACTATCAGGCTTTGTCATTCCCAGCAACTAGTTGATATTG 1840
|||||||||||||||||| || ||||||||||| |||||||| || ||||||||||| |
Sbjct 1861 AGAACCTGGAGATGTTGAGGACGATCAGGCTTTGCCATTCCCACCATCTAGTTGATATCG 1920
Query 1841 ACGATGTTTTAAAAGCTCAAAATCTTGAGGTAATTGATCTCCAAGGTTGTACAAGACTGC 1900
| ||| | ||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1921 ATGATCTCTTAAAAGCTGAAAATCTTGAGGTAATTGATCTCCAAGGTTGTACGAGACTGC 1980
Query 1901 AGAGTTTCCCAGCCACAGGTCAATTGCTACATCTACGAACTGTAAATCTCTCTGGTTGCA 1960
||| |||||||||| |||||| |||||||| ||||||| |||||||||||| |||||||
Sbjct 1981 AGAATTTCCCAGCCGCAGGTCGATTGCTACGTCTACGAGTTGTAAATCTCTCAGGTTGCA 2040
Query 1961 CAGAGATCAAAAGTTTCCCAGAGATTCCCCCAAATATTGAGACACTGA-ATCTACAGGGG 2019
| |||| |||||| ||| ||| ||||| ||||||||||||| ||| | ||||||||||
Sbjct 2041 TAAAGATTAAAAGTGTCCTAGAAATTCCACCAAATATTGAGAAACT-ACATCTACAGGGA 2099
Query 2020 ACTGGTATAATAGAATTACCACTTTCCATTATTAAGCCAAACTACACAGAGCTTTTGAAT 2079
||||| ||| ||| ||||||| |||||| | ||||||||||| | | ||||||| |||||
Sbjct 2100 ACTGGCATATTAGCATTACCAGTTTCCACTGTTAAGCCAAACCATAGAGAGCTTGTGAAT 2159
Query 2080 CTTCTAGCTGAAATCCCGGGTCTTTCAGGAGTCTCAAACCTTGAGCAAAGTGATCTCAAA 2139
||||| | ||||| ||||||||||||| || || | |||||| || | | ||
Sbjct 2160 TTTCTAACAGAAATTCCGGGTCTTTCAG-AGG---AA-C-TTGAGC---GT--T-T-AA- 2205
Query 2140 CCTTTAACAAGCCTGATGAAAA-TGAGCACATCTAATCAAAATCTTGGCAAGCTTATTTG 2198
| || | ||| || || | | | ||||| |||| ||||||| |||||||||||
Sbjct 2206 C----AA---GTCTGCTGGAATCTAA-CTCATCTTGTCAAGATCTTGGGAAGCTTATTTG 2257
Query 2199 CTTGGAGCTGAAAGATTG-TGCTCGTTTGC-GAAGTCTGCCAAACATGAATAATTTAGAA 2256
|||||||||||||||||| | || |||||| || |||||||||||||| |||||||||
Sbjct 2258 CTTGGAGCTGAAAGATTGCT-CTTGTTTGCAGA-GTCTGCCAAACATGGCTAATTTAGAT 2315
Query 2257 CTTCTCAAAGTTCTTGATCTTTCTGGTTGCTCAGAG-CTCGAGACTATCCAGGGTTTCCC 2315
||| || ||||||||||| || ||||||||| || || | |||| |||||||||||
Sbjct 2316 CTT---AATGTTCTTGATCTCTCGGGTTGCTCA-AGTCTTAATTCTATTCAGGGTTTCCC 2371
Query 2316 ACAGAAC-CTGAAAGAGTTATATCTTGCTGGCACTGCAGTAAGACAAGTGCCACAACTTC 2374
| | |||||| |||||||||||| |||||||||| ||||| |||||||||||||||
Sbjct 2372 TC-GTTTTCTGAAACAGTTATATCTTGGTGGCACTGCAATAAGAGAAGTGCCACAACTTC 2430
Query 2375 CTCAAAG-CTTAGAACTCTTTAATGCACATGG 2405
||||||| || |||| |||| |||||||||||
Sbjct 2431 CTCAAAGTCT-AGAAATCTTGAATGCACATGG 2461
Score = 907 bits (491), Expect = 0.0
Identities = 949/1156 (82%), Gaps = 88/1156 (8%)
Strand=Plus/Plus
Query 2222 GTTTGCGAAGTCTGCCAAACATGAATAATTTAGAACTTCTCAAAGTTCTTGATCTTTCTG 2281
||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||
Sbjct 2467 GTTTGCGAAGTCTGCCAAACATGGCTAATTTAGAATTTCTCAAAGTTCTTGATCTCTCTG 2526
Query 2282 GTTGCTCAGAGCTCGAGACTATCCAGGGTTTCCCACAGAACCTGAAAGAGTTATATCTTG 2341
|||||||||||||||||||||| |||||||| || | |||||| |||||||||||| |||
Sbjct 2527 GTTGCTCAGAGCTCGAGACTATTCAGGGTTTTCCTCGGAACCTAAAAGAGTTATATTTTG 2586
Query 2342 CTGGCACTGCAG-TAAGACAAGTGCCACAACTTCCTCAAAGCTTAGAACTCTTTAATGCA 2400
|||||||| | | ||||| ||||||| ||||||||| |||| |||| |||| ||||||
Sbjct 2587 CTGGCACTAC-GTTAAGAGAAGTGCCCCAACTTCCTTTAAGCCTAGAGGTCTTGAATGCA 2645
Query 2401 CATGGTTGTGTCTCTCTCAAGTCAATTCGCGTGGACTTCGAGAAGCTTCCTGTGCATTAC 2460
|| || | | ||| | | | | | |||||||||||| ||||||||
Sbjct 2646 CA----TG-G--T-TCT---G---A----C-T---C--GGAGAAGCTTCCTATGCATTAC 2681
Query 2461 ACACTT-AGTAATTGTTTT-GATCTCTGTCCAA-AAGTGGTCAGCGATTTTTTAGTGCAA 2517
| | || | |||| |||| ||||| | | ||| ||||||||| |||||||||| || ||
Sbjct 2682 A-AGTTCAACAATT-TTTTCGATCTATCT-CAACAAGTGGTCAACGATTTTTTATTGAAA 2738
Query 2518 GCGCTGGCTAATGCGAAACGCATACCAAGAGAGCATCA-ACAGGAA--C-TCAACAAAAC 2573
||||| || ||| |||| ||||||||||| | || | |||||| | |||||||| |
Sbjct 2739 ACGCTGACTTATGTAAAACACATACCAAGAGGGTAT-ACGCAGGAACTCATCAACAAAGC 2797
Query 2574 TTTGGCTTTCAGCTTCTGTGCGCCCTCACATGCGAATCAAAATTCCAAACTTGATCTGCA 2633
| | ||||||||||| |||||||||||||| | |||||||| ||| | ||||||||||
Sbjct 2798 TCCGACTTTCAGCTTCAGTGCGCCCTCACATACAAATCAAAACGCCACATTTGATCTGCA 2857
Query 2634 ACT-AGGATCTTCTGTAATGACACGACTAAATCCTTCTTGGAGGAACACACTTGTGGGCT 2692
| | ||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| |
Sbjct 2858 A-TCAGGATCTTCTGTAATGACACGACTAAATCATTCATGGAGGAACACGCTTGTGGGAT 2916
Query 2693 TTGCTATGCTGGTGGAAGTCGCATTTTCGGAGGATTACTATGATGCTACTGGTTTTGGCA 2752
||| ||||||||||||||| |||||| | ||||| |||| ||||||||| | | ||||||
Sbjct 2917 TTGGTATGCTGGTGGAAGTTGCATTTCCCGAGGACTACTGTGATGCTACAGATGTTGGCA 2976
Query 2753 TTAGTTGTGTTTGCAGATGGAAAAACAAGGAAGGCCACTCTCATAGGATAGAAAGAAA-T 2811
| ||||||||||||||||||| ||||| ||||||| |||| ||||||||||||||| |
Sbjct 2977 TAAGTTGTGTTTGCAGATGGAGCAACAAAGAAGGCCGCTCTTGTAGGATAGAAAGAAAAT 3036
Query 2812 TTGCATTGTTGGGCTCTAGGGAAAGCTGTTC-AAAAG---GA-----TCATATGTTTGTC 2862
|| ||||||||||| | | || ||| ||||| ||||| || ||||| |||||||
Sbjct 3037 TT-CATTGTTGGGCACCATGGCAAGTTGTTCCAAAAGTTCGAAAGGATCATACGTTTGTC 3095
Query 2863 TTCT-GTGATGACAACTTGCGTCCAAGTACTGATGAAGGAATTGACCCCGATATCTGGGC 2921
|| | |||||| |||| |||| |||||||| | |||||||| |||||| |||||||||||
Sbjct 3096 TT-TAGTGATGTCAACATGCGCCCAAGTACCGGTGAAGGAAATGACCCTGATATCTGGGC 3154
Query 2922 TG-ATTTAGTTGTCTTTGAGTTCTTTCCTGTCAA-CAATCAGACAAGGCT-TCTAGGTGA 2978
|| ||| |||||| ||||||||||||||| |||| || ||||||| | | |||| |||
Sbjct 3155 TGGATT-AGTTGTATTTGAGTTCTTTCCTATCAATCAG-CAGACAAAG-TGTCTAAATGA 3211
Query 2979 TAG-TTGCACAGTGACAAGATGTGGAGTCCGTGTAATAACTCCTCCAAACTG-CAATACA 3036
||| || |||||||| ||||||||||||||||||||||| | | ||| ||| |||||||
Sbjct 3212 TAGGTT-CACAGTGAGAAGATGTGGAGTCCGTGTAATAAATGTTGCAA-CTGGCAATACA 3269
Query 3037 AGTCTCGAGATATCATCGT-C-AGTTTTGTCCTTAGATCC-GATGGAGGTTTCTGGTAAT 3093
||||| |||| | ||| | | ||||||||| || ||||| | | |||||||| ||| |
Sbjct 3270 AGTCTTGAGA-A-CATAGCACTAGTTTTGTCTTTGGATCCAG-TAGAGGTTTCCGGT--T 3324
Query 3094 GAAGGTGAAGAAGTATTGAGAGTCAGTTATGATGGTTTACAGGAGATAGATAAAGCTT-T 3152
| ||||| ||||||||||||| ||||||| |||||||||||| ||||||| || |
Sbjct 3325 -A---TGAAG---TATTGAGAGTCAGCTATGATGATTTACAGGAGATGGATAAAG-TTCT 3376
Query 3153 ATTTCTTTACTTAGCAGG-TTTGTTCAATGACGAGGATGTTGATTTGGTGGCACCACTTA 3211
|||||||||| |||| | ||||||||||||||||||||||||||| |||||||||||||
Sbjct 3377 ATTTCTTTACATAGC-GTCTTTGTTCAATGACGAGGATGTTGATTTTGTGGCACCACTTA 3435
Query 3212 TTGCTAACAGTATTGACATGGACGTCAGTTATGGGCTCAAGGTCTTAGCCGATAG-GTCT 3270
|||| | |||||||| |||| || || | |||||||||||||||||||||| | ||||
Sbjct 3436 TTGC---CGGTATTGACTTGGATGTTAGCTCTGGGCTCAAGGTCTTAGCCGAT-GTGTCT 3491
Query 3271 CTCATACGTGTATCTTCCAATGGGGAAATAGTGATGTACAATTTGCAACA-AGAAATGGG 3329
|||||| ||||||| || |||||||||||||||||| | | ||||||| | | |||||||
Sbjct 3492 CTCATAAGTGTATCATCAAATGGGGAAATAGTGATGCATAGTTTGCAA-AGACAAATGGG 3550
Query 3330 TAAAGAAATCCTCCAT 3345
||||||||||||||||
Sbjct 3551 TAAAGAAATCCTCCAT 3566
> AT5G17890.1 | Symbols: CHS3, DAR4 | DA1-related protein 4 | chr5:5916970-5923355
FORWARD LENGTH=5082
Length=5082
Score = 401 bits (217), Expect = 2e-110
Identities = 1254/1735 (72%), Gaps = 149/1735 (9%)
Strand=Plus/Plus
Query 376 GACTCCCAATTTGTAAAAGAGATTGTCAAAGATGTGTATGAGAAGCTCTTTTAT-ATG-- 432
|||||| || | || ||||||| |||| |||||| |||| |||| | ||||| ||
Sbjct 487 GACTCCGAACTAGTGGAAGAGATCGTCAGAGATGTTTATGGGAAG--C-TTTATCCTGCA 543
Query 433 GAACGGA-TTGGAATCTATTCAAAGCTGCTGGAGATTGAGAAAA--TGGTTTGCAAGCAA 489
|||| || ||||||| || | | ||| || |||| | |||||| || ||| |||||||
Sbjct 544 GAAC-GAGTTGGAATTTACGCGAGGCTACTAGAGA-T-AGAAAAGTTGCTTTACAAGCAA 600
Query 490 CCGTTGGG-CATCCGTTGTGTTGGAATTTGGGGTATGCCTGGCATAGGCAAGACGACACT 548
| | ||| |||||| | | ||||||||||||||||||||||||||||||||||| ||
Sbjct 601 -CATAGGGACATCCGAAGCATAGGAATTTGGGGTATGCCTGGCATAGGCAAGACGACGCT 659
Query 549 TGCTAAAGCGGTCTTTGACCAAATGTCTGGC-GAATT-TGATGCTTCTTGTTTTATCGAA 606
||||||||| |||||| | || ||||| | || || |||||||||||| || |||||
Sbjct 660 TGCTAAAGCAGTCTTTAATCACATGTCCA-CTGA-TTATGATGCTTCTTGCTTCATCGA- 716
Query 607 GA-CTAT-A-GCAAAGCTATTCA-AGAGAAGGGTGTTTATTGTTTGCTGGAGGAACAGTT 662
|| || | | | || ||| |||| | || |||| | | ||||||| | ||| ||
Sbjct 717 GAACTTTGATG-AA-GCTTTTCATA-AGGAGGGACTCCACCGTTTGCTCAAAGAA-AGAA 772
Query 663 TTTG-AAAGA----AAATGCTG-GTGGTG-C-T-G---GTG-GTACCGTTACGAAACTGA 709
|| | ||| | ||| | || || || | | | || ||| ||| || || ||
Sbjct 773 TTGGTAAA-ATTCTAAAGGATGAGTT-TGACATAGAAAGTTCGTATA-TTATGAGACCGA 829
Query 710 GCTTGCTTAGAAACAAATTAAACAATCAGAGGGTTCTTGTTGTTCTT-GATGATGTGCGC 768
| | | ||| |||||||| || || | ||| ||||||||||| || ||||||||||||
Sbjct 830 CCCTCCATAGGGACAAATTATACGATAAAAGGATTCTTGTTGTT-TTAGATGATGTGCGC 888
Query 769 -AGTCCTCTGGTTGTGGAGTCTTTTCTTGGAGGGTTTGACTGGTTTGGTCCCAAAAGCCT 827
| ||| || | || ||||| || ||| | || |||| ||||||||| || ||||||
Sbjct 889 GATTCC-CTTGCTGCAGAGTCCTTCCTTAAAAGGCTTGATTGGTTTGGTTCCGGAAGCCT 947
Query 828 AATCATCATAACCTCTAGA-GATAAACAGGTGTTTCGCCTTT-GTC-GAGTCGATCAAAT 884
|| ||||||||||| | |||||||| |||||| |||||| ||| || || |||||||
Sbjct 948 TATAATCATAACCTCC-GTTGATAAACAAGTGTTT-GCCTTTTGTCAGA-TCAATCAAAT 1004
Query 885 ATATGA-GGTTCTGGGTTTAAATGAGAAAGAGGCTCTTCAGCTCTTCTCTTTTTGTGCGT 943
||| | ||||| |||||||||| | | |||||||| ||||| ||||| | |||
Sbjct 1005 ATAC-ACGGTTCAAGGTTTAAATGTGCACGAGGCTCTGCAGCTTTTCTCCCAAAG--CGT 1061
Query 944 CTATAGACGATATG-GC-AGAGCAGAGTCTCCATGAGG-TGTCAATGAAAGTGGTTAAGT 1000
| | || | | | || |||||||| | | | || |||||||||| ||| || | |
Sbjct 1062 ATTTGGAATAAACGAGCCAGAGCAGAATGAC-AGGAAACTGTCAATGAAGGTGATTGACT 1120
Query 1001 ATGCGAGTGGACATCCATTAGCTCTCAGTC-TCTATGGCAGAGAGCTGAA-GGGTaaaaa 1058
||| | |||| | || ||||||||||| | | || ||| ||||||| || ||| || ||
Sbjct 1121 ATGTTAATGGAAACCCGTTAGCTCTCAG-CATTTACGGCCGAGAGCT-AATGGGGAAGAA 1178
Query 1059 aaCACTGCCAGAAATGGAGACAACATTCCTCGAACTCAAGGAACATCCTCCAACT-AT-G 1116
| | |||||||||||| ||||| |||| |||||| | |||||| || | |
Sbjct 1179 G----T-C-AGAAATGGAGACTGCATTCTTCGAGCTCAAGCATTGTCCTCC--CTTAAAG 1230
Query 1117 TTTGTTGATGCAATCAAGAGCTGCT-AT-GACACACTCAATGACAGGGaaaaaaaCATT- 1173
|| |||| | || | | ||| || | |||| | |||| || || ||||||
Sbjct 1231 ATTCAGGATGTGCTAAAAAAC-GCTTATAGTG-CACTTAGCGACAATGAGAAGAACATTG 1288
Query 1174 TTCTTGGACATAGCTTGTTTCTTTGAGGGAGAAAATGTCGACTACGTGATGCAACTGCTT 1233
|| |||||||| |||| |||||| ||||||||| |||| | || |||||||| ||||||
Sbjct 1289 TT-TTGGACATTGCTTTTTTCTTCAAGGGAGAAACTGTCAATTATGTGATGCAGCTGCTT 1347
Query 1234 GAGGGTTGTGGTTTCTTTCCACATGTTGGAATTGATGTTCTTGTCGAGAAGTGTCTGGTG 1293
|||| | | || |||||||| | ||| ||| ||||||||||| || |||||| || |
Sbjct 1348 GAGGAATCTCATTACTTTCCACGTCTTGCAATAGATGTTCTTGTGGACAAGTGTGTGTTA 1407
Query 1294 ACTAT-TACAGAAAAC-CAAGTGCGGATGCATAACTTGATCCAA-A-ATGTTGGCCGACA 1349
||||| | |||||||| || |||| ||| |||| ||||||||| | | | | || | |
Sbjct 1408 ACTATCT-CAGAAAACACA-GTGCAAATGAATAATTTGATCCAAGACACCT-G-CCAAGA 1463
Query 1350 AATAATAAATAGAGAAACAAGACAGAC-TAAGAGGCGCGACAGACTGTGGGAACCTTGGA 1408
||| | ||| |||||| || ||| | | | | |||| |||||||||||| |
Sbjct 1464 AATCTTCAATGGAGAAATT-GA--GACCT--G---CAC--CAGAATGTGGGAACCTTCCA 1513
Query 1409 GCATCAAATATTTATTAGAAGATAACGGAGAAAAAGAAAATGGAGAACACAAAA-CAACT 1467
| |||| |||| | ||||| || | | | ||| || ||||||| || ||| ||| |
Sbjct 1514 GAATCAGATATCTGCTAGAATATGATGAACTTGAAGGAAGTGGAGAA-ACCAAAGCAA-T 1571
Query 1468 TTGGAA--CGTGCTCAGGGCCCTGAAGAGATCGAAGGCATGTTTCTGGACACATCAAACT 1525
|| | || || || | ||||| | |||||| |||| || |||||||| ||||||
Sbjct 1572 GCCTAAATC-TGGTCTGGTCGCTGAACACATCGAAAGCATATTCCTGGACACTTCAAACG 1630
Query 1526 TTAGTTTTGATATTAAGC-CTGCTGCCTTTGATAATATGTTGAACCTTAGATTGCTCAAG 1584
| | |||||| | || | | | ||| || | |||||||| || || | ||| || |||
Sbjct 1631 TGAAATTTGATGTCAAACAC-GATGCATTCAAGAATATGTTTAATCTCAAATTCCTAAAG 1689
Query 1585 ATTTACAGTTCCAAT-C-CTGAAGTCCAT--CATGTAAAGAATTTCCTCAAAGGCTCTCT 1640
|| |||| ||| | | | || || | || | || | ||||| | |||||| | ||
Sbjct 1690 ATATACAATTC-A-TGCTCTAAA-TATATTTC-TGGACTCAATTTTC-CAAAGGG-C-CT 1742
Query 1641 CAATTCTCTTCCTAATGAGCTAAGACTCCTCCATTGGGAGAACTATCCTCTGCAGTTTCT 1700
| ||||||| ||| |||||||||| |||||||| ||||||||||| ||| |||| | ||
Sbjct 1743 CGATTCTCTGCCTTATGAGCTAAGGCTCCTCCACTGGGAGAACTACCCTTTGCAATC-CT 1801
Query 1701 -GCCCCAAAATTTTGATCCTAT--ACACCTTGTTGAAA-TCAACATGCCGTACAGCCAAC 1756
||| ||| ||||||| | | | |||||||||| || ||| ||||| |||||||| |
Sbjct 1802 TGCCTCAAGATTTTGA-CTT-TGGACACCTTGTT-AAGCTCAGTATGCCTTACAGCCAGC 1858
Query 1757 TTAAGAAACTTTGGGGTG-GAACCAAGAACCTGGAGATGTTGAAA-ACTATCAGGCTTTG 1814
|| | ||||| ||| || |||| |||| | |||||| ||| | ||| ||||
Sbjct 1859 TTCATAAACTC-GGGACAAGAGTCAAGGACCTTGTGATGTT-AAAGAGGCTCATTCTTTC 1916
Query 1815 TCATTCCC-AGCAACTAGTTGATAT-TGACGATGTTT-TAAAAGCTCAAAATCTTGAGGT 1871
|||||| | || |||||||| || |||| || | || | ||||||||| | ||| |
Sbjct 1917 TCATTCTTTA-CAGCTAGTTGA-ATGTGAC-ATACTAATATATGCTCAAAATATCGAGCT 1973
Query 1872 AATTGATCTCCAAGGTTGTACAAGACTGCAGAG-TTTCCCAGCCAC-AGGTCAATTGCTA 1929
||||||||| ||||| |||||| || |||| || ||||| || ||| || |||||| | |
Sbjct 1974 AATTGATCTTCAAGGCTGTACAGGATTGCAAAGATTTCC-AGACACGAG-TCAATTAC-A 2030
Query 1930 CA-TCTACGAACT-GTAAATCTCTCTGGTTGCACAGAGATCAAAAGTTTCCCAGAGATTC 1987
| ||| || | ||||||||||| |||||||||||||||||| ||||| ||| | |||
Sbjct 2031 GAATCTCCGGG-TAGTAAATCTCTCAGGTTGCACAGAGATCAAATGTTTCTCAGGGGTTC 2089
Query 1988 CCCCAAATATTGAG-ACACTGA-ATCTACAGGGGACTGGTATAATAGAATTACCA 2040
| |||||||||||| | | | | |||| || || ||| |||||| ||| |||||
Sbjct 2090 CACCAAATATTGAGGA-ATT-ACATCTCCAAGGAACTCGTATAAGGGAAATACCA 2142
> AT2G34830.1 | Symbols: WRKY35, MEE24, AtWRKY35 | WRKY DNA-binding
protein 35 | chr2:14693756-14696378 REVERSE LENGTH=1367
Length=1367
Score = 285 bits (154), Expect = 2e-75
Identities = 225/259 (87%), Gaps = 6/259 (2%)
Strand=Plus/Plus
Query 3486 CAGCCGGTCCAGTGAAGAA---G-T-AG-CTGACCTATGGGTTTGGCGAAAGTACGGTAA 3539
|||||||||||||| |||| | | | |||| ||||||| |||||||||||||||| |
Sbjct 615 CAGCCGGTCCAGTGGAGAAGTTGTTCCGTCTGATCTATGGGCTTGGCGAAAGTACGGTCA 674
Query 3540 AAAACCCCTCAAAGGTTCTCCTTATCCAAGGAATTACTACAAATGTACCAGCTCGAAAGG 3599
|||||| ||||||||||||||||||||||| |||||||| ||||| |||||| |||||
Sbjct 675 AAAACCTATCAAAGGTTCTCCTTATCCAAGGGGTTACTACAGATGTAGCAGCTCAAAAGG 734
Query 3600 TTGTTCAGCTAGGAAACAAATCGAACGTAGCCGCACCGATCCAAACATGTTAGTCATTAC 3659
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 735 TTGTTCAGCTAGGAAACAAGTCGAACGTAGCCGCACTGATCCAAACATGTTAGTCATTAC 794
Query 3660 TTACATCACTGAGCATAACCATCCATCCCCCACTCAACGCAATGCTCTTGCCGGCTCCAC 3719
||||| | ||||||||||||| |||| || ||||||||||| ||||| || || |||||
Sbjct 795 TTACACCTCTGAGCATAACCACCCATGGCCTACTCAACGCAACGCTCTCGCAGGTTCCAC 854
Query 3720 TCATTCCCCGTCATCCTCC 3738
|| |||| | || ||||||
Sbjct 855 TCGTTCCTCTTCCTCCTCC 873
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 203477120808
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5