BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915685
Length=2241
Score E
Sequences producing significant alignments: (Bits) Value
AT5G44870.1 | Symbols: LAZ5 | Disease resistance protein (TIR-N... 2093 0.0
> AT5G44870.1 | Symbols: LAZ5 | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18114666-18118608 FORWARD LENGTH=3513
Length=3513
Score = 2093 bits (1133), Expect = 0.0
Identities = 1581/1793 (88%), Gaps = 48/1793 (3%)
Strand=Plus/Plus
Query 475 GAACAGT-CTCCACCCCACTACGGAATAGAACTGCGCCTTAAGGA-ACTAGAAGGAAAGA 532
||||| | |||||||| ||||||||||||||| ||||||||||| | | |||| ||||
Sbjct 748 GAACA-TCCTCCACCCAACTACGGAATAGAACCACGCCTTAAGGAGA-TGGAAGAAAAGT 805
Query 533 TACAATTTGATTGCGTAGAAACTATGATTGTTGGAATTGTTGGGATGCCTGGGATTGGTA 592
|| | |||||| || | ||||||| | ||||||||||||||||||||||||||||||||
Sbjct 806 TAGATTTTGATAGCCTCGAAACTAAAACTGTTGGAATTGTTGGGATGCCTGGGATTGGTA 865
Query 593 AAACCACTCTTGCGGAAACATTGTATAGGAAGTGGGAACACAAGTTTGAGAGGAGCATGT 652
||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct 866 AAACCACTCTTGCAGAAACGTTGTATAGAAAGTGGGAACACAAGTTTGAGAGGAGTATGT 925
Query 653 TTTTCCCAGATGTCAGTAAGATGGCGAGTCAAC-C---A-G-GAT---TGCAGAAGAGAT 703
|||||||||||| |||||||||||||| | ||| | | | | | ||||||||||||
Sbjct 926 TTTTCCCAGATGCCAGTAAGATGGCGAATGAACACGGAATGTGTTGGCTGCAGAAGAGAT 985
Query 704 TATTGGAAGAGCTGTTGAAGGATATTCAT-TACAAGACAGGATATACAGA-GAATGAACA 761
|||||||||||||||||||||||| | || | ||| | |||||||||| | |||||||||
Sbjct 986 TATTGGAAGAGCTGTTGAAGGATACTAATCT-CAACATAGGATATACA-ACGAATGAACA 1043
Query 762 TGAGTTTTGTAAGGATGATCTTCTCGAAAAGAAAGTTTTTGTTGTTATAGATGATGTTAG 821
||||||||||||||||| ||||||| ||||||||||||| |||| |||||| |||||||
Sbjct 1044 TGAGTTTTGTAAGGATGTTCTTCTCCTAAAGAAAGTTTTTCTTGTCATAGATAATGTTAG 1103
Query 822 TAGCAAGGAACAGCTC-AAATCTCTTTTTGGTCAATGTG-ATTGGATCAAAAAAGGTAGC 879
|||| |||||||| || ||| ||||||||||| |||| | ||||||| ||||| || |||
Sbjct 1104 TAGCGAGGAACAGATCGAAA-CTCTTTTTGGTAAATG-GAATTGGATTAAAAATGGAAGC 1161
Query 880 AAGATTGTTATTACATCAAGTGATAAGTCACTGCTCAAGGAACTGGTTGACGATACCTAT 939
|||||||||||||| ||||||||| ||||| ||||||||| | ||| | ||||| |||
Sbjct 1162 AAGATTGTTATTACGTCAAGTGATGAGTCAATGCTCAAGGGTTTCGTTAAAGATACTTAT 1221
Query 940 GTAGTCCCAAGGTTGAACAGCAGAGACAGTTTACTGTGGTTTACCAATCACGCCTTTGGT 999
||||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||||||
Sbjct 1222 GTAGTCCCAAGTTTGAACAGCAGAGACAGTCTACTGTGGTTTACTAATCATGCATTTGGT 1281
Query 1000 TTGGATGATGCCGAGGGAAACTTCGTAAAGTTGTCCACACACTTTCTGAATTATGCCAAA 1059
|||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 1282 TTGGATGATGCCCAGGGAAACTTGGTAAAGTTGTCCAAACACTTTCTGAATTATGCCAAA 1341
Query 1060 GGCAACCCACTAGTCCTCAGAGCTTTTGGTGTAGAACTTCGTGGGAAAGACGAGGCTTAT 1119
||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||| ||
Sbjct 1342 GGCAACCCACTAGCCCTCGGAGCTTTTGGTGTAGAACTTTGTGGGAAAGACAAGGCTGAT 1401
Query 1120 TGGGAACAGAGGATTGGAACACTGGCACAAAGCTCCAATAAGATGATCCAATATGTCTTG 1179
|||||| |||| || |||| || ||| || |||||||||||||||||| ||||||||
Sbjct 1402 TGGGAAAAGAGAATAAAAACATTGACACTAATTTCCAATAAGATGATCCAAGATGTCTTG 1461
Query 1180 AGAAAAAGATATGATGAACTCACAGAGAGGCAAAAAGATGCTTTTCTTGACGTTGCATGT 1239
|||| ||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||
Sbjct 1462 AGAAGAAGGTATGATGAACTCACAGAGAGGCAGAAAGATATTTTTCTTGACGTCGCATGT 1521
Query 1240 TTCTTCAAATCAGAGAATGTAAGTTATGTACGATGCTTGGTAAATTCATGTGAATCTAAG 1299
||||||||||||||||||| ||||||||||||| | |||| ||||||||||| ||| ||
Sbjct 1522 TTCTTCAAATCAGAGAATGAAAGTTATGTACGACACGTGGTGAATTCATGTGATTCTGAG 1581
Query 1300 TCTACTATG-GTTTGGCATGACATAAGAGATCTCCAA-GACAAGTTTCTCGTCAATATTT 1357
||||||| | | |||| |||| |||| ||||||| || || |||||||| ||||||||||
Sbjct 1582 TCTACTAAGAG-TTGGGATGAAATAACAGATCTCAAAGGA-AAGTTTCTTGTCAATATTT 1639
Query 1358 CTGGTGGTCGAGTTGAGATGCATGATATAGTATGTACATTCGCTAAGGAAATTGCTTCAC 1417
||||||||||||||||||||||||||||| |||| |||||||| |||||| |||||||||
Sbjct 1640 CTGGTGGTCGAGTTGAGATGCATGATATACTATGCACATTCGCCAAGGAACTTGCTTCAC 1699
Query 1418 AAGCATTGACCGAAGAAAATACAAAGGTTCATCTCATGCTCCGGAACTATCAAGATATCA 1477
|||||||||| |||| |||||| ||||||||||| ||| ||||||||||||||||||
Sbjct 1700 AAGCATTGACTGAAG---ATACAAGGGTTCATCTCAGGCTGTGGAACTATCAAGATATCA 1756
Query 1478 T-TTGTTGGCTGAAGAATAAATTGGAAATGAAAAATGTCAGAGGTATATTCTTAGACATG 1536
| | ||| || || ||| ||||||||||| |||||||||||||||| ||||||||||||
Sbjct 1757 TGTGGTT-TCTCAACAATGAATTGGAAATGGAAAATGTCAGAGGTATTTTCTTAGACATG 1815
Query 1537 TCTGAAGTTCCGGAGGAAACGATATTTGATTCTCACATCTTTAGCAAAATGTGCAATCTT 1596
||| ||||||||||||||| || ||||||| | ||||||||||||| ||||||||||||
Sbjct 1816 TCTAAAGTTCCGGAGGAAATGACATTTGATGGTAACATCTTTAGCAATATGTGCAATCTT 1875
Query 1597 CGATATCTCAAAATATGCACTTCTGCCTGCCCTAAGCAAGGCGAAGGTATCTTCACATTT 1656
|||||||||||||||| || ||||| |||| |||| |||||||||||||||||| ||||
Sbjct 1876 CGATATCTCAAAATATACAGTTCTGTTTGCCATAAGGAAGGCGAAGGTATCTTCAAATTT 1935
Query 1657 GACATCTA--TAAGGAAATTC-GCTTACCATTACATAAGGTACGGTATCTCCACTGGATG 1713
|||| | | || |||||||| | ||||||||| | |||||||| |||||||||||||||
Sbjct 1936 GACA-C-AGTTAGGGAAATTCAG-TTACCATTAGACAAGGTACGCTATCTCCACTGGATG 1992
Query 1714 AAATATCCATGGGAGAAACTGCCATCAGACTTCAACCCGAAGAATCTTGTTGATCTTGAA 1773
|||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||
Sbjct 1993 AAATATCCATGGGAGAAACTTCCATCAGACTTCAACCCGGAGAATCTCGTTGATCTTGAA 2052
Query 1774 CTGCCTTATAGCTCCATTAAGCAAGTTTGGGTGGGTGTAAAGGATACCCCAAAACTAAAG 1833
||||||||||||||||||||| ||||||||| |||||| ||||||||||| | |||||||
Sbjct 2053 CTGCCTTATAGCTCCATTAAGAAAGTTTGGGAGGGTGTTAAGGATACCCCGATACTAAAG 2112
Query 1834 TGGGCCAATCTCAGCTATTCAAGTAAGTTGACTAACCTTTTAGGGTTGTCAAATGCTAAA 1893
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2113 TGGGCCAATCTAAGCTATTCAAGTAAGTTGACTAACCTTTTAGGGTTGTCAAATGCTAAA 2172
Query 1894 AATCTTGAAAGATTGAATCTTGAAGGTTGCACAAGTCTGCTTAAACTGCCCCAAGAGATG 1953
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2173 AATCTTGAAAGATTGAATCTTGAAGGTTGCACAAGTTTGCTTAAACTGCCCCAAGAGATG 2232
Query 1954 GAAAACATGAAAAGTCTTGTCTTCCTGAATATGAGACGTTGCACGAGTCTCACATTTCTT 2013
|| |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct 2233 GAGAACATGAAAAGTCTTGTCTTCCTGAACATGAGACGTTGCACTAGTCTCACATGTCTT 2292
Query 2014 CAAAGAATGAATA-TGAGTTCTCTGAAAATTCTCATACTCAGTGAACCACATGGTA-CTC 2071
||||| || || | |||| |||||||||||||||||||||||||| | | | | ||
Sbjct 2293 CAAAGTATTAA-AGTGAGCTCTCTGAAAATTCTCATACTCAGTGA-CTGC-TCAAAACTT 2349
Query 2072 -AGGGG---GACG-GCTTCCTCGGAAAATCTGGAAGCATTATATTTAGATGGAACTGCAA 2126
||| || | | || |||||||||||||||| |||||||||||||||||||||||
Sbjct 2350 GAGGAATTTGAGGTGATT--TCGGAAAATCTGGAAGAATTATATTTAGATGGAACTGCAA 2407
Query 2127 TAAAGGGACTCCCTCCAGCCACCGGGGATCTGATGAGACTTGCCATCTTAAATATGAAAG 2186
|||||||||| |||||||| |||||||||||| |||||||| | ||||||||||| |||
Sbjct 2408 TAAAGGGACTTCCTCCAGCGGCCGGGGATCTGACGAGACTTGTCGTCTTAAATATGGAAG 2467
Query 2187 GATGTACAGAACTAGAGAGTCTTCCCAAACATCTTGGAAACCAGAAAGCTCTT 2239
| ||||||||||| |||||||||||||||| ||||||||| ||||||||||||
Sbjct 2468 GCTGTACAGAACTGGAGAGTCTTCCCAAACGTCTTGGAAAACAGAAAGCTCTT 2520
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 111194207175
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5