BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg916217
Length=1434
Score E
Sequences producing significant alignments: (Bits) Value
AT5G48000.1 | Symbols: CYP708A2, CYP708 A2, THAH, THAH1 | cytoc... 2167 0.0
AT3G44970.1 | Symbols: | Cytochrome P450 superfamily protein |... 359 5e-98
> AT5G48000.1 | Symbols: CYP708A2, CYP708 A2, THAH, THAH1 | cytochrome
P450, family 708, subfamily A, polypeptide 2 | chr5:19444138-19447850
REVERSE LENGTH=1792
Length=1792
Score = 2167 bits (1173), Expect = 0.0
Identities = 1351/1438 (94%), Gaps = 8/1438 (1%)
Strand=Plus/Plus
Query 1 ATGAGCTTCGTCTGGTCCGCTGCGGTGTGGGTCATAACTGTAGCAGTTGTTGTGATTAGC 60
||||||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||
Sbjct 184 ATGAGCTTCGTGTGGTCCGCTGCGGTGTGGGTCATAGCTGTAGCCGCTGTTGTGATTAGC 243
Query 61 AAATGGTTATACCGGTGGTCGAACCCGAAGTGCAATGGCAAGTTACCTCCGGGATCAATG 120
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 244 AAATGGTTATACCGATGGTCGAACCCGAAGTGCAATGGCAAGTTACCACCGGGATCAATG 303
Query 121 GGTTTACCGATCATCGGAGAGACATGCAACTTCTTTGAGCCCCATGGATTATACGAGATC 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 304 GGTTTACCGATCATCGGAGAGACATGCGACTTCTTTGAGCCCCATGGATTATACGAGATC 363
Query 181 TCACCCTTTGTCAAGAAGAGGATGTTAAAGTACGGGCCATTGTTTCGGACCAACATTTTC 240
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 364 TCACCCTTTGTCAAGAAGAGGATGTTAAAGTACGGGCCATTGTTTCGGACAAATATTTTC 423
Query 241 GGATCCAACACCGTGGTTTTGACAGAACCTGATATCATCTTTGAGGTTTTCCGACAAGAG 300
||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||||||
Sbjct 424 GGATCGAACACCGTGGTTTTGACAGAACCTGATATCATCTTCGAAGTTTTTCGGCAAGAG 483
Query 301 AACAAGTCTTTTGTGTTTAGCTATCCAGAAGCCTTTGTAAAGCCATTTGGAAAAGAAAAC 360
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 484 AACAAGTCTTTTGTGTTTAGCTATCCAGAAGCTTTTGTCAAGCCATTTGGAAAAGAAAAC 543
Query 361 GTGTTCCTCAAACATGGGAACATCCACAAGCACGTCAAACAAGTCAGTCTTCAACATATT 420
||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||
Sbjct 544 GTGTTCCTCAAACATGGAAACATCCACAAGCACGTCAAGCAAATCAGTCTTCAACATCTT 603
Query 421 GGCTCTGAGGCCTTaaaaaaaaaGCTGATTGGAGAAATAGACAGAGTGACCTATGAGCAT 480
||||||||||| |||||||||||| |||| ||||||||||||||||| ||||||||||||
Sbjct 604 GGCTCTGAGGCTTTAAAAAAAAAGATGATAGGAGAAATAGACAGAGTAACCTATGAGCAT 663
Query 481 CTTAAATCAAAGGCTAGCCAGGGTAGCTTCAATGCTAAGGAGACAGTTGAAAGC-TTGAT 539
|||| ||| ||||||| ||||||||||||| ||||||||||| |||||||||| || ||
Sbjct 664 CTTAGATCGAAGGCTAACCAGGGTAGCTTCGATGCTAAGGAGGCAGTTGAAAGTGTT-AT 722
Query 540 AATGGCACACCTGACCCCGAAGATAATAAGTAACCTCAAACCAGAAACACAAACAAATCT 599
|||||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||
Sbjct 723 AATGGCGCACTTGACCCCAAAGATAATAAGTAACCTCAAACCAGAAACACAAGCAACTCT 782
Query 600 TGTGGACAATATAATGTCCCTAGGATCTGAATGGTTTCAGTCACCGTTAAAGCTTACGAC 659
|||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||
Sbjct 783 TGTGGACAATATAATGGCCCTAGGATCTGAATGGTTTCAGTCACCCTTGAAGCTTACGAC 842
Query 660 ATGGATTTCTATCTTCAAAGTCTTTATTGCCCGAAGAGACGCACTGCAGGTGATAAAGGA 719
| ||||||||||| ||||||||||||||| || ||| |||| || ||||||||||||||
Sbjct 843 TTTGATTTCTATCTACAAAGTCTTTATTGCACGTAGATACGCCCTCCAGGTGATAAAGGA 902
Query 720 CGTTTTTATGAGGAGGAAAGCGTCCAGAGAAATGTGCGGAGACTTCCTCGACACAATGGT 779
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 CGTTTTCACGAGGAGGAAAGCGTCCAGAGAAATGTGCGGAGACTTCCTCGACACAATGGT 962
Query 780 AGAAGAGGGGGAGAAAGAAGAGGTCATTTTTAATGAAGAAGGTGCTATAAATCTCATCTT 839
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||
Sbjct 963 AGAAGAGGGGGAGAAAGAAGACGTCATTTTTAATGAAGAAAGTGCTATAAATCTCATATT 1022
Query 840 CGCTATTCTGGTAGTCGCTAAAGAATCAACCTCTTCCGTTACTAGCTTGGCCATCAAATT 899
||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1023 CGCTATTTTGGTCGTCGCTAAAGAATCTACCTCTTCCGTTACTAGCTTGGCCATCAAATT 1082
Query 900 TCTTGCCGAAAACCATAAAGCTCTCGCAGAGTTGAAGAGAGAGCATGAGGCCATCCTTCA 959
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1083 TCTTGCCGAAAACCATAAAGCTCTCGCAGAGTTGAAGAGGGAGCATGCGGCCATCCTTCA 1142
Query 960 AAATAGAAATGATAAAGAAGCTGGAGTTGGCTGGGAAGAATACAGACACCACATGACTTT 1019
||||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1143 AAATAGAAATGGTAAAGGAGCTGGAGTTAGCTGGGAAGAATACAGACACCAAATGACTTT 1202
Query 1020 CACTAACATGGTGATCAATGAGACTCTTCGAATGGCAAACATGGCTCCTATAATGTATAG 1079
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 CACTAACATGGTGATAAATGAGACTCTTCGAATGGCAAACATGGCTCCTATAATGTATAG 1262
Query 1080 GAAGGCTGTGAACGATGTCGAAATCAAAGGATACACAATTCCAGCGGGCTGGATTGTGGC 1139
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1263 AAAGGCTGTGAACGATGTCGAAATCAAAGGTTACACAATTCCAGCGGGCTGGATTGTGGC 1322
Query 1140 GGTTATACCTCCAGCCGTCCATTTCAATCATGAGATTTATGAGAATCCTTTGGAGTTCAA 1199
||||||||| ||||| |||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 1323 GGTTATACCACCAGCTGTCCATTTCAATGATGCTATTTATGAGAATCCTTTGGAGTTCAA 1382
Query 1200 TCCATGGAGATGGGAGGGGAAAGAGTTGCGGTCTGGATCTAAGACGTTCATGGTATTTGG 1259
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1383 TCCATGGAGATGGGAGGGGAAAGAGTTGCGGTCTGGATCTAAGACGTTCATGGTGTTTGG 1442
Query 1260 AGGAGGAGTGAGGCAATGTGTCGGCACGGAGTTTGCGAGACTCCAAATTTCTATCTTCAT 1319
||| |||||||| || ||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 1443 AGGTGGAGTGAGACAGTGTGTCGGCGCGGAGTTTGCGAGACTACAAATTTCTATCTTCAT 1502
Query 1320 TCATCATCTTGTAACCAAA-TATGATTTCTCACTGGCCCAAGAATTCG-ATTTCATCCGT 1377
||||||||||||||| || || ||||||||| |||||||||||| || | |||||||||
Sbjct 1503 TCATCATCTTGTAAC-AACCTACGATTTCTCATTGGCCCAAGAAT-CGGAGTTCATCCGT 1560
Query 1378 GCACCACTACC-TCACTTCCCCAAAGGACTGCCTATCAAGATTTCCCAGTCACTCTAG 1434
|||||||| || | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 GCACCACTCCCAT-ACTTCCCCAAAGGACTGCCTATCAAGATTTCCCAGTCACTCTAG 1617
> AT3G44970.1 | Symbols: | Cytochrome P450 superfamily protein
| chr3:16432443-16434848 FORWARD LENGTH=1440
Length=1440
Score = 359 bits (194), Expect = 5e-98
Identities = 367/450 (82%), Gaps = 14/450 (3%)
Strand=Plus/Plus
Query 907 GAAAA-CCATAAAGCTCTCGCAGAGTTGAAGAGAGAGCATGAGGCCATCCTTCAAAATAG 965
||||| ||| |||| |||||||||||| |||| ||| ||||||| |||||| ||| ||
Sbjct 907 GAAAACCCA-AAAGTTCTCGCAGAGTTAAAGAAAGAACATGAGGTGATCCTTGAAAGCAG 965
Query 966 A-AATGATAAAGAAGCTGGAGTTGGC-TGGGAAGAATACAGACACCACATGACTTTCACT 1023
| || || ||||||| ||||||| | |||||||||||||||||| | |||||||||||
Sbjct 966 AGAA-GACAAAGAAGGTGGAGTT-ACTTGGGAAGAATACAGACACAAGATGACTTTCACC 1023
Query 1024 AACATGGTGATCAATGAGACTCTTCGAATGGCAAACATGGCTCCTATAATGTATAGGAAG 1083
|||||||| ||||||||| |||||||||| ||||| |||||||||| | | ||| ||
Sbjct 1024 AACATGGTTATCAATGAGTCTCTTCGAATAACAAACTTGGCTCCTATGTTATTTAGAAAA 1083
Query 1084 GCTGTGAACGATGTCGAAATCAAAGGATACACAATTCCAGCGGGCTGGATTGTGGCGGTT 1143
|| || || ||||| ||||||||||||||||| |||||||| || ||||| ||| | ||
Sbjct 1084 GCGGTAAAGGATGTGGAAATCAAAGGATACACCATTCCAGCAGGTTGGATAGTGATGATT 1143
Query 1144 ATACCTCCAGCCGTCCATTTCAATCATGAGATTTATGAGAATCCTTTGGAGTTCAATCCA 1203
|||||| ||| || ||||| ||| ||| || ||||| || ||||| ||||| ||||||
Sbjct 1144 ATACCTTCAGTGGTTCATTTTGATCCTGAAATCTATGAAAACCCTTTTGAGTTTAATCCA 1203
Query 1204 TGGAGATGGGAGGGGAAAGAGTTGCGGTCTGGATCTAAGACGTTCATGGTATTTGGAGGA 1263
||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct 1204 TGGAGATGGGAGGGGAAAGAGTTGCGGGCTGGATCTAAAACGTTCATGGTGTTTGGAACC 1263
Query 1264 GGAGTGAGGCAATGTG-TCG-GCACGGAGTTTGCGAGACTCCAAATTTC--TATCTTCAT 1319
||| | || ||||| | | | ||| | ||||||| || || || ||||| ||| ||| |
Sbjct 1264 GGACTTAGACAATGCGCTGGTGCA-G-AGTTTGCTAGGCTTCAGATTTCAGTAT-TTC-T 1319
Query 1320 TCATCATCTTGTAACCAAATATGATTTCTC 1349
|||||||||||| |||| ||| |||||||
Sbjct 1320 TCATCATCTTGTTACCACTTATAATTTCTC 1349
Score = 263 bits (142), Expect = 4e-69
Identities = 418/547 (76%), Gaps = 36/547 (7%)
Strand=Plus/Plus
Query 76 TGGTCGAACCCGAAGTGC-AATGGCAAGTTACCTCCGGGATCAATGGGTTTACCGATCAT 134
||||| ||||| |||| | || ||||||||||||||||||||||||||||| ||||||||
Sbjct 76 TGGTCAAACCCTAAGT-CTAACGGCAAGTTACCTCCGGGATCAATGGGTTTCCCGATCAT 134
Query 135 CGGAGAGACATGCA-ACTTCTTTGAGCCCCATGGATTATACGAGATCTCACCCTT-TGTC 192
||||||||||| | | |||||| |||| ||||||| ||||||||||| ||| | | ||
Sbjct 135 CGGAGAGACATT-AGATTTCTTTAAGCCTTATGGATTCTACGAGATCTC-CCCATATCTC 192
Query 193 AAGAAGAGGATGTTAAAGTACGGGCCATTGTTTCGGACCAACATT-TTCGGA-TCCAACA 250
||||| | |||||||| ||| |||||||| |||||||| |||||| || ||| | || |
Sbjct 193 AAGAAAAAGATGTTAAGGTATGGGCCATTATTTCGGACAAACATTCTT-GGAGTAAAA-A 250
Query 251 CCGTGGTTTTGACAGA-ACCTGATATCATCTTTGAGGTTTTCCGACAAGAGAACAAGTCT 309
||||||| | ||| || | ||| | | | | ||| |||| |||||||||||||||||
Sbjct 251 CCGTGGTATCGACGGATAAG-GATGTTAACATGGAGATTTTAAGACAAGAGAACAAGTCT 309
Query 310 TTTGTGTTTA-GCTATCCAGAAGCCTTTG-TAAAGCCATTTGGAAAAGAAAACGTGTTCC 367
|| | |||| | ||||| || | ||| | |||||||| |||||||| | | |||||
Sbjct 310 TTCAT-TTTAAGTTATCCGGATGG-TTTAATGAAGCCATTGGGAAAAGATAGCTTGTTCT 367
Query 368 TCAAACATGGGAA-CATCCACAAGCACGTCAAACAAGTCAGTCTTCAACATATTGGC-TC 425
| || || |||| ||||||||||||| |||||||| | | |||||| | | ||| | ||
Sbjct 368 TGAAG-ATTGGAAACATCCACAAGCACATCAAACAAATAACTCTTCATCTT-TTGTCCTC 425
Query 426 TGAGGCCTTaaaaa--aaaaGCTGATTGGA-GAAATAGACAGAGTGAC-CTATGAGCATC 481
|||| |||||| |||| | ||| | || || ||| | ||||| | |||||||
Sbjct 426 CGAGGGTTTAAAACGGAAAA--T-ATTAAAAGATATGGACCGTGTGACACGC-GAGCATC 481
Query 482 TTAAATC-AAAGGCTAGC-CAGGGTAGCTTCAATGCTAAGGA-GACAGTTG-AAAGCTTG 537
||| || |||| ||| |||| || || ||| |||||| | ||||| ||| |||
Sbjct 482 TTAGTTCGAAAG-CTAAAACAGGA-AGATTGGATGTTAAGGACG-CAGTTTCAAAA-TTG 537
Query 538 ATAATGGCACACCTGACCCCGAAGATAATAAGTAACCTCAAACCAGAAACACAAACAAAT 597
||||| || ||| |||| || ||||| || ||||| ||||||||| | || ||| ||||
Sbjct 538 ATAATAGCCCACTTGACACCTAAGATGATGAGTAATCTCAAACCACAGACTCAAGCAAAG 597
Query 598 CTTGTGG 604
||| |||
Sbjct 598 CTTATGG 604
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70682367360
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5