BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg916283 Length=219 Score E Sequences producing significant alignments: (Bits) Value AT3G33187.1 | Symbols: | Defensin-like (DEFL) family protein |... 311 2e-84 AT5G28950.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 108 3e-23 > AT3G33187.1 | Symbols: | Defensin-like (DEFL) family protein | chr3:14020687-14021392 REVERSE LENGTH=267 Length=267 Score = 311 bits (168), Expect = 2e-84 Identities = 194/207 (94%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 1 ATGTACGTACCTTCTGGAACTGGTAGTCGATTACTGTTCCTTGTCAAAGCATCATTTAAT 60 |||||| || ||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1 ATGTACTTATCTTCTAGAACTGGTAGTCGATTACTGTTCCTTGTGAAAGCATCATTTAAT 60 Query 61 ACTTTTGAAAAAGTTGCAACCATTTCTTCAACACTAATATATTTTGTATCGCATAAACTT 120 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 61 ACTTTTGAGAAAGTTGCAACCATTTCTTCAACACTAATATATTTCGTATCGCATAAACTT 120 Query 121 GTCTGCTCCCGGAGTTCTTTACATAACTTAAGAAATATTTGTGGATACATTCGATACAAC 180 ||| |||||||||||| || ||||||||| ||||||||||||||||| |||||| ||||| Sbjct 121 GTCAGCTCCCGGAGTTGTTCACATAACTTCAGAAATATTTGTGGATATATTCGACACAAC 180 Query 181 TGTCGAAAATGCATAGGGTTTTGCTTT 207 ||||||||||||||| ||||||||||| Sbjct 181 TGTCGAAAATGCATAAGGTTTTGCTTT 207 > AT5G28950.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:10992505-10993435 FORWARD LENGTH=447 Length=447 Score = 108 bits (58), Expect = 3e-23 Identities = 58/58 (100%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 11 CTTCTGGAACTGGTAGTCGATTACTGTTCCTTGTCAAAGCATCATTTAATACTTTTGA 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 CTTCTGGAACTGGTAGTCGATTACTGTTCCTTGTCAAAGCATCATTTAATACTTTTGA 241 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9802211055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5