BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg916349 Length=690 Score E Sequences producing significant alignments: (Bits) Value AT5G48510.1 | Symbols: | BTB/POZ domain-containing protein | c... 841 0.0 AT2G40450.1 | Symbols: | BTB/POZ domain-containing protein | c... 318 4e-86 > AT5G48510.1 | Symbols: | BTB/POZ domain-containing protein | chr5:19658080-19658882 FORWARD LENGTH=675 Length=675 Score = 841 bits (455), Expect = 0.0 Identities = 612/684 (89%), Gaps = 26/684 (4%) Strand=Plus/Plus Query 1 ATGGCAACTCTAACTAACAAAGAGCATTTCTCGGGTGGACTTGCAAAGGTTTTGGCaaaa 60 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 1 ATGGCAACTCCAACCAACAAAGAGCATTTCTCGGGTGGACTTGCAAAGGTTTTGGCAGAA 60 Query 61 aaaTGGAAAGTTGACGTAATGCTCAAGGCAAAGAATAGTGATGAGGGTTCAGCTATCTCT 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AAATGGCAAGTTGACGTAATGCTCAAGGCAAAGAATAGTGATGAGGGTTCAGCTATCTCT 120 Query 121 GCCCACAAACTTATTCTGGCATCAAGATCGGAGGTTTTTAGGAAGATGTTGGAATTAGAG 180 |||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| Sbjct 121 GCCCACAAACTTATTCTGGCATCAAGATCGGAGGTTTTTAAGAATATGTTCGAATTAGAC 180 Query 181 GAGGTT-AAGACTTCGACAAAACAAGTGGAAACAATCACTCTCTCAGATATGAAACAAGA 239 ||| || ||||||||||| ||||| ||||||||||| ||||| ||||| |||||||| || Sbjct 181 GAG-TTCAAGACTTCGACTAAACATGTGGAAACAATTACTCTTTCAGAGATGAAACATGA 239 Query 240 AGAGTTAGAAGCGTTTGTTGAGTTTATATACAGTGATGGCACAATGCTTTCTGCTAACGT 299 |||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct 240 AGAGTTAGAAGCTTTTGTTGAGTTTATATGCAGTGATGGCTCAATGCTTTCTGCCAACGT 299 Query 300 GAAACAACATGCTCGCTCACTCTATCTTGCGGCTGATAAATACGAGATTATGCATCTTCG 359 ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||| || Sbjct 300 GAAACAACATGCTCGCTCACTCTATCTTGCGGCTGATAAGTATGAGATTCTGCATCTACG 359 Query 360 AGACCTATGCAGAACCAAGCTTATATCTTCTCTGAGTTTGTCGAATTCTCTTGACCTCCT 419 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 360 AGACCTATGCAGAACCGAGCTTATATCTTCTCTGAGTTTGTTGAATTCTCTTGACCTCCT 419 Query 420 TGAGCTCGCCCAAATCCCTTTTGACAAAGTCCTTCA-CGATGCA-GCCTTT-AGTTATAT 476 || |||||| ||||||||||||||||||||||| || ||||| | | ||| |||||||| Sbjct 420 TGTGCTCGCTCAAATCCCTTTTGACAAAGTCCT-CAACGATGAAAG--TTTCAGTTATAT 476 Query 477 CAAAAAGAATATAA-TAACGATTGCTAGCTCTGATGAGTTCAAATTGTTCGTCGCCAGTA 535 ||||| ||||||| || ||||||||||||||||||||||||| |||||||||||| ||| Sbjct 477 AAAAAATAATATAAGTA-CGATTGCTAGCTCTGATGAGTTCAAGTTGTTCGTCGCCGGTA 535 Query 536 ACCCAAATCTTTCCGTGGAGATAATGAAGGCTTCTCT--T-ACT-TGTACAGCTGTAAGC 591 ||||||||||| |||||||||||||||||| |||||| | ||| | ||| | || || Sbjct 536 ACCCAAATCTTGCCGTGGAGATAATGAAGGTTTCTCTCATTACTCT-TACT--T-TACGC 591 Query 592 TGTTC-TAACTGTGGTTACTA-CAATAATCCTCTTAG-TG-GAAGCTGTTGTAATTGTGG 647 ||||| | |||||||| | | | ||| || || || | | | ||||||||||||| | Sbjct 592 TGTTCCTC-CTGTGGTT-CAAACCATAGTCTTCA-AGGTATGTA-CTGTTGTAATTGTTG 647 Query 648 TCGCTTCGGTACTCTTCGTTGGAT 671 ||||| |||||||||||||| ||| Sbjct 648 TCGCTACGGTACTCTTCGTTTGAT 671 > AT2G40450.1 | Symbols: | BTB/POZ domain-containing protein | chr2:16892024-16892790 REVERSE LENGTH=630 Length=630 Score = 318 bits (172), Expect = 4e-86 Identities = 400/506 (79%), Gaps = 31/506 (6%) Strand=Plus/Plus Query 82 CTCAAGGCAAAGA-ATAGTGATGAGGGTTCAGCTA-TCTCTGCCCACAAACTTATTC-TG 138 |||||||| | || | ||||||||| | || ||| | || |||||||| ||| || || Sbjct 82 CTCAAGGC-AGGAGACAGTGATGAGACTACATCTATTTTC-GCCCACAAGCTT-GTCTTG 138 Query 139 GCATCAAGATCGGAGGTTTTTAGGAAGATGTTGGAATTAGAGGAGGTT-AAGACTTCGA- 196 | ||||||| ||||| |||| |||||| ||||||| ||| || ||| ||| |||| | Sbjct 139 GTGGCAAGATCAGAGGTGTTTAAGAAGATATTGGAATCAGACGA-GTTCAAGGCTTC-AT 196 Query 197 CAAAACAAG-TGGAAACAATCACTCTCTCAGATATGAAACAAGAAGAGTTAGAAGCGTTT 255 | |||| || |||| ||| |||| ||||| || |||||||| ||||| || || || ||| Sbjct 197 CTAAAC-AGATGGAGACAGTCACCCTCTCGGAGATGAAACACGAAGAATTGGAGGCTTTT 255 Query 256 GTTGAGTT--TATATACAG-TGATGGCACAATGCT-TTCTGCTA-ACGTGAA-ACAACAT 309 || ||||| | |||| | ||||||| | || | |||||||| | | || | ||||| Sbjct 256 GTGGAGTTCATCTATAGGGTTGATGGCTCCAT-TTGTTCTGCTAGTC-TCAAGA-AACAT 312 Query 310 GCTCGCTCACTCTATCTTGCGGCTGATAAATACGAGATTATGCATCTTCGAGACCTATGC 369 ||||| ||||||| || ||| || || ||||| |||||| |||||| ||||||||||| Sbjct 313 GCTCGTTCACTCTTTCATGCAGCCGACAAATATGAGATTCCGCATCTAAGAGACCTATGC 372 Query 370 AGAACCAAGCTTATATCTTCTCTGAGTTTGTCGAATTCTCTTGA-CCTCCTTGAGCTCGC 428 |||| | |||||||||| ||| ||| || ||||||| ||||| | | ||||||||||||| Sbjct 373 AGAAACGAGCTTATATCATCTTTGAATTCGTCGAATGCTCTT-AGCATCCTTGAGCTCGC 431 Query 429 CCAAATCCCTTTTGACAAAGTCCTTCAC-GATGCAGCCTTTAGTTA-TATCAAAAAGAAT 486 |||||||||||||||||||| ||| || ||| | ||||| | | | ||||| || ||| Sbjct 432 CCAAATCCCTTTTGACAAAGCCCT-CAATGATCCCGCCTTCACT-ACTATCATAACCAAT 489 Query 487 ATAA-TAACGATTGCTAGCTC-TGATGAGTTCAAATTGTTCGTCGCCAGTAACCCAAATC 544 |||| || |||||||||| | |||||||||||| |||| ||||||| | ||||||||| Sbjct 490 ATAAGTA-CGATTGCTAG-TGGTGATGAGTTCAAGCTGTTTGTCGCCAATCACCCAAATC 547 Query 545 TTTCCGTGGAGATAATGAAGGCTTCT 570 || ||||||| ||||||||||||||| Sbjct 548 TTGCCGTGGATATAATGAAGGCTTCT 573 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33405707755 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5