BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg916369
Length=1587
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43470.1 | Symbols: RPP8, HRT, RCY1 | Disease resistance pro... 1495 0.0
AT5G48620.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1437 0.0
AT5G35450.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1369 0.0
AT1G53350.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 819 0.0
AT1G10920.1 | Symbols: LOV1 | NB-ARC domain-containing disease ... 710 0.0
> AT5G43470.1 | Symbols: RPP8, HRT, RCY1 | Disease resistance protein
(CC-NBS-LRR class) family | chr5:17462611-17467448 REVERSE
LENGTH=3310
Length=3310
Score = 1495 bits (809), Expect = 0.0
Identities = 1072/1197 (90%), Gaps = 25/1197 (2%)
Strand=Plus/Plus
Query 372 TGACATGATGAGAGAAGTATGTTTATCTAAAGCCAAAGAAGAGAGCTTCCTACAAATTAT 431
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1666 TGACATGATGAGAGAAGTATGTTTATCTAAAGCCAAAGAAGAGAACTTCCTACAAATTAT 1725
Query 432 CAAAGTCCCTACTTCCACATCTACCATCAATGCTCAATCTCCTAGTAGATCTCGCAGACT 491
|| || |||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1726 CATAGACCCTACTTGCACCTCTACCATCAATGCTCAATCTCCTAGTAGATCTCGCAGACT 1785
Query 492 CACCATACGTAGTGGTAAAGCCTTTCATATACTGGGACACAAAAACAATAAAAAAGTCAG 551
|| ||||| |||||||||||||||||||||| |||||||||||||||| | ||| || ||
Sbjct 1786 CAGCATACATAGTGGTAAAGCCTTTCATATATTGGGACACAAAAACAAGACAAAGGTGAG 1845
Query 552 ATCTCTTATAGTTTTGGGACTCGAGGAAGACTTTTGGATACAG-TCAGCTTCAGTCTTCC 610
||||||||||||| | || |||||||||||| |||||||| | ||||||||||||||||
Sbjct 1846 ATCTCTTATAGTTCCGAGATTCGAGGAAGACTATTGGATAC-GATCAGCTTCAGTCTTCC 1904
Query 611 AAAATTTACCATTGCTCAGGGTGTTGGATCTTAC-TGAGGTGAAGTTTAAAGGAGGGAAG 669
| || ||| ||||||||||||||||||||||| | || ||| |||||| |||||||||||
Sbjct 1905 ACAACTTAACATTGCTCAGGGTGTTGGATCTTTCTTG-GGTAAAGTTTGAAGGAGGGAAG 1963
Query 670 TTACCTTCTAGTATTGGAGGGCTTATCCACTTGAGATTCTTGAGCTTAGACGATGCTGGG 729
||||||| ||| ||||||||||| ||||||||||||| |||||| ||| |||| ||| |
Sbjct 1964 TTACCTTGTAGCATTGGAGGGCTCATCCACTTGAGATACTTGAGTTTATACGAGGCTAAG 2023
Query 730 GTATCTCAGCTACCTTCTTCTATGCGGAATTTAAAGCTTCTCCTCTATTTAG-ACTTAAG 788
|||||||| ||||||||| |||||||||| |||||||||| |||||||| | ||||| |
Sbjct 2024 GTATCTCATCTACCTTCTACTATGCGGAACCTAAAGCTTCTGCTCTATTT-GAACTTACG 2082
Query 789 TGTTGCTGCCGAGGAACCAG-TTCATGTGCCAAATGTTTTGAAAGAGATGCTAGAGTTGA 847
||||| | |||||||||| | |||| |||||||||||||||||||||||| || ||||||
Sbjct 2083 TGTTGATACCGAGGAACC-GATTCACGTGCCAAATGTTTTGAAAGAGATGATACAGTTGA 2141
Query 848 GGAACCTTGT-CCTACCTCATAAGATGCATGATAAAACCAAGTTGGAATTGGGTGATCTA 906
|| ||||| | |||||||| ||| ||| ||||||||||||||||||||||||||||||||
Sbjct 2142 GGTACCTT-TCCCTACCTCTTAAAATGGATGATAAAACCAAGTTGGAATTGGGTGATCTA 2200
Query 907 GTGAACCTGGTGCACTTG--TGGTATTTCTCAACGCAACACAGTAGTGTGACAGACCTCC 964
|||||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 2201 GTGAACCTGGAGTACTTGTATGG--TTTCTCAACGCAACACAGTAGTGTGACAGACCTCC 2258
Query 965 TCCGTATGACCAAGCTCAGGTATCTCTCTGTATCTTTGAGCGAAAGGTGTACTTTTGAAA 1024
|||||||||| |||||| |||||||| |||||||||||||||||||||| | ||||||||
Sbjct 2259 TCCGTATGACTAAGCTCCGGTATCTCGCTGTATCTTTGAGCGAAAGGTGCAATTTTGAAA 2318
Query 1025 CCCTATCGTCATCTCTCCGTC-AATTGCGTAACCTCGAGACGCTTTATTT-GGATTTTCG 1082
| ||||||||||||||||| | ||||||| ||||||||||||||| |||| ||||||
Sbjct 2319 CTCTATCGTCATCTCTCCG-CGAATTGCGAAACCTCGAGACGCTTAATTTCCTTTTTTCG 2377
Query 1083 GTACAAAACCTATACGGTTGATTATGTGGGAGAGTTGGATCTGG---ATTTTATTCATCT 1139
| | |||| |||| |||||||||| |||||||||| | ||||| |||||||||||||
Sbjct 2378 CT-CGAAACATATATGGTTGATTATATGGGAGAGTTTGTTCTGGATCATTTTATTCATCT 2436
Query 1140 AAAAGAGTTAGGATTGACAGGACGTATGTCAAAGATTCCTGATCAACATCAATTCCCTCC 1199
|||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2437 AAAACAGTTGGGATTGGCAGTACGTATGTCAAAGATTCCTGATCAACATCAATTCCCTCC 2496
Query 1200 CCACCTTGAACACATATCTCT-ATTTAATTGCCGCATGGAGGAGGATCCAATGCCAATTC 1258
|||||||| |||| ||| ||| |||| ||||| ||||||| |||||||||||||||||||
Sbjct 2497 CCACCTTGTACACTTATTTCTAATTT-ATTGCGGCATGGAAGAGGATCCAATGCCAATTC 2555
Query 1259 TAGAAAAGTTGCTTCATTTGAAGTCGGTTAAATTAGGATC-TGACGCTTTCGTTGGGAGG 1317
||||||||||||||||||||||||||||| |||| | | | | || ||| | |||||
Sbjct 2556 TAGAAAAGTTGCTTCATTTGAAGTCGGTTCGTTTAGCA-CGTAAGGCATTCCTAGGGAGC 2614
Query 1318 AAAATGTTGTGCTCAAAAGGTGGATTTCCTCAATTACGTGCTCTAGAAATATATGAAGAA 1377
| |||| ||||||||||||| ||||||||||||||| ||| | ||||||||| | |||||
Sbjct 2615 AGAATGGTGTGCTCAAAAGGCGGATTTCCTCAATTATGTGTTATAGAAATATCTAAAGAA 2674
Query 1378 TCAGAGTTGGAAGAGTGGATAGTGGAAGAAGGGTCGATGCCATGTCTTCGTACTTTAACT 1437
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 2675 TCAGAGTTGGAAGAGTGGATAGTAGAAGAAGGGTCGATGCCATGTCTTCGTACTTTGACT 2734
Query 1438 ATAGATGATTGCAAAAAGTTGAAGGAACTTCCTGATGGACTCAAGTACATAACATCCTTA 1497
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2735 ATAGATGATTGCAAAAAGTTGAAGGAACTTCCAGATGGACTCAAGTACATAACATCCTTA 2794
Query 1498 AAGGAACTGAAGATTAAAAGAATGAAGAGGGAGTGGAAGGAGAAATTGGTACCAGGT 1554
||||||||||||||| || |||||||||||||||||||||||||| |||||||||||
Sbjct 2795 AAGGAACTGAAGATTGAAGGAATGAAGAGGGAGTGGAAGGAGAAACTGGTACCAGGT 2851
Score = 483 bits (261), Expect = 3e-135
Identities = 332/367 (90%), Gaps = 2/367 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGCCATGGGAAAGGAAATGGTCAAACATTGTGGAGGACTACCATTAGCTGTTAAA 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1232 ATGGAAGCCATGGGAAAGGAAATGGTCACACATTGTGGAGGACTACCATTAGCTGTTAAA 1291
Query 61 GTGTTGGGAGGCTTGTTAGTTAATAAACATACAGTTCATGAGTGGAAAAGAGTTTCTGAC 120
| ||||||||||||||||| |||||||||||| |||| ||||||||||||||||| ||||
Sbjct 1292 GCGTTGGGAGGCTTGTTAGCTAATAAACATACTGTTCCTGAGTGGAAAAGAGTTTTTGAC 1351
Query 121 AATATCGGAGATCAAATCGTAGGAAAATCTTGCTTAAATGACAACAGTCTCAATTCGGTT 180
||||| ||| |||||| |||||| ||| || ||| |||||||||||||||||||||||
Sbjct 1352 AATATTGGATCTCAAATAGTAGGAGGATCGTGGTTAGATGACAACAGTCTCAATTCGGTT 1411
Query 181 AACCGAATATTGTCTCTGAGTTATGAAGATTTGCCAACGCATTTAAAGCATTGCTTCCTT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1412 TACCGAATATTGTCTCTGAGTTATGAAGATTTGCCAACGCATTTAAAGCATTGCTTCCTT 1471
Query 241 TATCTAGCCCATTACCGGGAAGATTCCAAGATATATATGTGGAATTTGTTCAATTACTGG 300
| |||||||||| || ||||||||| |||||| || || | ||||||| ||||||||
Sbjct 1472 AACCTAGCCCATTTCCCCGAAGATTCCGAGATATCTACGTATAGTTTGTTCTATTACTGG 1531
Query 301 GCTGCAGAAGGAATTTGTTATGGATCAACCATCAGA-GATAGTGGAGAAGACTACCTAGA 359
||||||||||| |||| |||||||||||||| || |||||||||||| ||||||||||
Sbjct 1532 GCTGCAGAAGGGATTTACGATGGATCAACCATC-GAAGATAGTGGAGAATACTACCTAGA 1590
Query 360 AGAGCTA 366
|||||||
Sbjct 1591 AGAGCTA 1597
Score = 62.1 bits (33), Expect = 2e-08
Identities = 33/33 (100%), Gaps = 0/33 (0%)
Strand=Plus/Plus
Query 1555 ACACATTCCCGATGTTCAATTTATCAACTGTGA 1587
|||||||||||||||||||||||||||||||||
Sbjct 2875 ACACATTCCCGATGTTCAATTTATCAACTGTGA 2907
> AT5G48620.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr5:19716476-19721452 FORWARD LENGTH=3790
Length=3790
Score = 1437 bits (778), Expect = 0.0
Identities = 1062/1197 (89%), Gaps = 27/1197 (2%)
Strand=Plus/Plus
Query 373 GACATGATGAGAGAAGTATGTTTATCTAAAGCCAAAGAAGAGAGCTTCCTACAAATTATC 432
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 2023 GACATGATGAGAGAAGTATGTTTATCTAAAGCCAAAGAAGAGAACTTCTTACAAATTATC 2082
Query 433 AAAGTCCCTACTTCCACATCTACCATCAATGCTCAATCTCCTAGTAGATCTCGCAGACTC 492
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2083 AAAGACCCTACTTCCACCTCTACCATCAATGCTCAATCTCCTAGTAGATCTCGCAGATTC 2142
Query 493 ACCATACGTAGTGGTAAAGCCTTTCATATACTGGGACACAAAAACAATAAAAAAGTCAGA 552
| ||||| |||||||||||||||||||||| ||||||||| ||||||| ||| || |||
Sbjct 2143 AGCATACATAGTGGTAAAGCCTTTCATATATTGGGACACAGAAACAATCCAAAGGTGAGA 2202
Query 553 TCTCTTATAGTTTTGGGACTCGAGGAAGACTTTTGGATACAG-TCAGCTTCAGTCTTCCA 611
||||||||||||| | || ||||||||||||||||||||| | |||||||||||||||||
Sbjct 2203 TCTCTTATAGTTTCGAGATTCGAGGAAGACTTTTGGATAC-GATCAGCTTCAGTCTTCCA 2261
Query 612 AAATTTACCATTGCTCAGGGTGTTGGATCTTACTGA-GGTGAAGTTTAAAGGAGGGAAGT 670
|| ||| ||||||||||||||||||||||| || | ||| |||||| ||||||||||||
Sbjct 2262 CAACTTAACATTGCTCAGGGTGTTGGATCTTTCT-AGGGTAAAGTTTGAAGGAGGGAAGT 2320
Query 671 TACCTTCTAGTATTGGAGGGCTTATCCACTTGAGATTCTTGAGCTTAGAC-GATGCTGGG 729
|||||||||| ||||||||||| ||||||||||||| |||||||||| || || |||| |
Sbjct 2321 TACCTTCTAGCATTGGAGGGCTCATCCACTTGAGATACTTGAGCTTATACGGA-GCTGTG 2379
Query 730 GTATCTCAGCTACCTTCTTCTATGCGGAATTTAAAGCTTCTCCTCTATTTAG-ACTTAAG 788
|||||||| ||||||||| |||||||||| ||||||||||| |||| ||| | ||||| |
Sbjct 2380 GTATCTCATCTACCTTCTACTATGCGGAACTTAAAGCTTCTGCTCT-TTTTGAACTTACG 2438
Query 789 TGTTGCTGCCGAGGAACCAG-TTCATGTGCCAAATGTTTTGAAAGAGATGCTAGAGTTGA 847
||||| | | ||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct 2439 TGTTGATAACAAGGAACC-GATTCACGTGCCAAATGTTTTGAAAGAGATGCTAGAGTTGA 2497
Query 848 GGAACCTTGT-CCTACCTCA-TAAGATGCATGATAAAACCAAGTTGGAATTGGGTGATCT 905
|| ||||| | ||||||||| || ||| |||||||||||||||||||||||||||||||
Sbjct 2498 GGTACCTT-TCCCTACCTCAGGAA-ATGGATGATAAAACCAAGTTGGAATTGGGTGATCT 2555
Query 906 AGTGAACCTGGTGCACTTGTGGTATTTCTCAACGCAACACAGTAGTGTGACAGACCTCCT 965
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2556 AGTGAACCTGGAGTACTTGTGGTATTTCTCAACGCAACACAGTAGTGTGACAGACCTCCT 2615
Query 966 CCGTATGACCAAGCTCAGGTATCTCTCTGTATCTTTGAGCGAAAGGTGTACTTTTGAAAC 1025
||||||||| |||||| || ||||| ||||||||||||||||||||| | |||||||||
Sbjct 2616 CCGTATGACTAAGCTCCGGAATCTCGGTGTATCTTTGAGCGAAAGGTGCAATTTTGAAAC 2675
Query 1026 CCTATCGTCATCTCTCCGTCAATTGCGTAACCTCGAGACGCTTTATTTGGATTTT-CGGT 1084
|||||||||||||||||| ||||||| |||||||| | |||| || | |||| ||
Sbjct 2676 TCTATCGTCATCTCTCCGTGAATTGCGAAACCTCGAAATGCTTAATGTCCTTTTTTCGCC 2735
Query 1085 ACAAAACC-TATACGGTTGATTATGTGGGAGAGTTGGATCTGGAT--TTT-ATTCATCTA 1140
| ||| | | || ||||||| || |||||||||| | ||||||| ||| |||||||||
Sbjct 2736 -CGAAATCGT-TATGGTTGATCATATGGGAGAGTTTGTTCTGGATCATTTTATTCATCTA 2793
Query 1141 AAAGAGTTAGGATTGACAGGACGTATGTCAAAGATTCCTGATCAACATCAATTCCCTCCC 1200
||| |||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2794 AAACAGTTGGGATTGGCAGTACGTATGTCAAAGATTCCTGATCAACATCAATTCCCTCCC 2853
Query 1201 CACCTTGAACACATATC-TCTATTTAATTGCCG-CATGGAGGAGGATCCAATGCCAATTC 1258
||||||| |||||| | |||| | ||||| | |||| | |||||||||||||||||||
Sbjct 2854 CACCTTGCCCACATA-CATCTAGTGCATTGC-GTCATGAAAGAGGATCCAATGCCAATTC 2911
Query 1259 TAGAAAAGTTGCTTCATTTGAAGTCGGTTAAATTAGGATCTGACGCTTTCGTTGGGAGGA 1318
||||||||||||||||||||||||||||| |||| | | || |||||| | ||| |||
Sbjct 2912 TAGAAAAGTTGCTTCATTTGAAGTCGGTTGCATTAAGTTATGGTGCTTTCATCGGGCGGA 2971
Query 1319 AAATGTTGTGCTCAAAAGGTGGATTTCCTCAATTACGTGCTCTAGAAATATATGAAGAAT 1378
| || ||||||||||||| ||||||||||||||| |||| |||| ||||| || |||||
Sbjct 2972 GAGTGGTGTGCTCAAAAGGCGGATTTCCTCAATTATGTGCCCTAGGAATATCTGGAGAAT 3031
Query 1379 CAGAGTTGGAAGAGTGGATAGTGGAAGAAGGGTCGATGCCATGTCTTCGTACTTTAACTA 1438
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 3032 CAGAATTGGAAGAGTGGATAGTAGAAGAAGGGTCGATGCCATGTCTTCGTACTTTGACTA 3091
Query 1439 TAGATGATTGCAAAAAGTTGAAGGAACTTCCTGATGGACTCAAGTACATAACATCCTTAA 1498
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3092 TACATGATTGCGAAAAGTTGAAGGAACTTCCTGATGGACTCAAGTACATAACATCCTTAA 3151
Query 1499 AGGAACTGAAGATTAAAAGAA-TGAAGAGGGAGTGGAAGGAGAAATTGGTACCAGGT 1554
|||| || ||||||| | ||| ||||||||||||||||||||||| |||||||||||
Sbjct 3152 AGGAGCTAAAGATTAGA-GAAATGAAGAGGGAGTGGAAGGAGAAACTGGTACCAGGT 3207
Score = 516 bits (279), Expect = 3e-145
Identities = 339/368 (92%), Gaps = 4/368 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGCCATGGGAAAGGAAATGGTCAAACATTGTGGAGGACTACCATTAGCTGTTAAA 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1588 ATGGAAGCCATGGGAAAGGAAATGGTCACACATTGTGGAGGACTACCATTAGCTGTTAAA 1647
Query 61 GTGTTGGGAGGCTTGTTAGTTAATAAACATACAGTTCATGAGTGGAAAAGAGTTTCTGAC 120
| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1648 GCGTTGGGAGGCTTGTTAGCTAATAAACATACAGTTCCTGAGTGGAAAAGAGTTTCTGAC 1707
Query 121 AATATCGGAGATCAAATCGTAGGAAAATCTTGCTTAAATGACAACAGTCTCAATTCGGTT 180
||||| ||| |||||| |||||| ||| |||||| |||||||||||||||||||||||
Sbjct 1708 AATATTGGATCTCAAATAGTAGGAGGATCGTGCTTAGATGACAACAGTCTCAATTCGGTT 1767
Query 181 AACCGAATATTGTCTCTGAGTTATGAAGATTTGCCAACGCATTTAAAGCATTGCTTCCTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1768 AACCGAATATTGTCTCTGAGTTATGAAGATTTGCCAACGCATTTAAAGCATCGCTTCCTT 1827
Query 241 TATCTAGCCCATTACCGGGAAGATTCCAAGATATATATGT-GGAATTTGTTCAATTACTG 299
|| |||||||||| || ||||||||||||||||| | | ||| |||||||||||||||
Sbjct 1828 TACCTAGCCCATTTCCCTGAAGATTCCAAGATATACACGCAGGA-TTTGTTCAATTACTG 1886
Query 300 GGCTGCAGAAGGAATTTGTTATGGATCAACCATC-AGAGATAGTGGAGAAGACTACCTAG 358
|||||||||||| |||| |||||||||||||| | ||||||||||||| |||||||||
Sbjct 1887 GGCTGCAGAAGGGATTTACGATGGATCAACCATCCA-AGATAGTGGAGAATACTACCTAG 1945
Query 359 AAGAGCTA 366
||||||||
Sbjct 1946 AAGAGCTA 1953
Score = 62.1 bits (33), Expect = 2e-08
Identities = 33/33 (100%), Gaps = 0/33 (0%)
Strand=Plus/Plus
Query 1555 ACACATTCCCGATGTTCAATTTATCAACTGTGA 1587
|||||||||||||||||||||||||||||||||
Sbjct 3231 ACACATTCCCGATGTTCAATTTATCAACTGTGA 3263
> AT5G35450.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr5:13667686-13671184 FORWARD LENGTH=3231
Length=3231
Score = 1369 bits (741), Expect = 0.0
Identities = 1049/1193 (88%), Gaps = 40/1193 (3%)
Strand=Plus/Plus
Query 372 TGACATGATGAGAGAAGTATGTTTATCTAAAGCCAAAGAAGAGAGCTTCCTACAAATTAT 431
|||||||||||| ||||||||| ||||||||||||||| ||||| |||||| ||||||||
Sbjct 1584 TGACATGATGAGGGAAGTATGTATATCTAAAGCCAAAGTAGAGAACTTCCTCCAAATTAT 1643
Query 432 CAAAGTCCCTACTTCCACATCTACCATCAATGCTCAATCTCCTAGTAGATCTCGCAGACT 491
|||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||
Sbjct 1644 CAAAGTCCCTACTTCCACCTCTACCATCATTGCTCAATCTCCTAGTAGATCTCGAAGACT 1703
Query 492 CACCATACGTAGTGGTAAAGCCTTTCATATACTGGGACACAAAAACAATAAAAAAGTCAG 551
|||| ||| |||||||||||||||||||||||| |||||| | || ||||| |||||
Sbjct 1704 CACCGTACATAGTGGTAAAGCCTTTCATATACTAGGACAC----A-AA-AAAAAGGTCAG 1757
Query 552 ATCTCTTATAGTTTTGGGACTCGAGGAAGACT-TTTGGATACAGTCAGCTTCA-GTCTTC 609
||||||| |||||||||||||| ||||||| | |||||||||| ||||||||| | ||||
Sbjct 1758 ATCTCTTTTAGTTTTGGGACTCAAGGAAGA-TCTTTGGATACAATCAGCTTCACG-CTTC 1815
Query 610 CAAAATTTACCATTGCTCAGGGTGTTGGATCT-TACTGAGGTGAAGTTTAAAGGAGGGAA 668
|||| |||||||||||||||||||||||||| | || ||| || ||| ||||||||||
Sbjct 1816 CAAAGCTTACCATTGCTCAGGGTGTTGGATCTGT-CTTCGGTAAAATTTGAAGGAGGGAA 1874
Query 669 GTTACCTTCTAGTATTGGAGGGCTTATCCACTTGAGATTCTTGAGCTTAGACGATGCTGG 728
|||||||||||| ||||||||||| ||||| |||||||||||||||||| || | ||||
Sbjct 1875 GTTACCTTCTAGCATTGGAGGGCTCATCCATTTGAGATTCTTGAGCTTACACCAAGCTGT 1934
Query 729 GGTATCTCAGCTACCTTCTTCTATGCGGAATTTAAAGCTTCTCCTCTATTTAG-ACTTA- 786
||||||||| ||||||||| |||| ||||||||||||||| | |||||||| | |||||
Sbjct 1935 GGTATCTCATCTACCTTCTACTATTCGGAATTTAAAGCTTATGCTCTATTT-GAACTTAC 1993
Query 787 AGTGTTGCTGCCGAGGAACCAGTTCATGTGCCAAATGTTTTGAAAGAGATGCTAGAGTTG 846
| ||||||| || || || ||||| |||||||||||||||||||||||||||||||||
Sbjct 1994 A-TGTTGCTATCGGGGTGCCGGTTCACGTGCCAAATGTTTTGAAAGAGATGCTAGAGTTG 2052
Query 847 AGGAACCTTGT-CCTACCTCAT-AAGATGCATGATAAAACCAAGTTGGAATTGGGTGATC 904
||| ||||| | |||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct 2053 AGGTACCTT-TCCCTACCTC-TGGATATGCATGATAAAACCAAGTTGGAATTGGGTGATC 2110
Query 905 TAGTGAACCTGGTGCACTTGTGGTATTTCTCAACGCAACACAGTAGTGTGACAGACCTCC 964
|||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2111 TAGTGAACCTGGAGTACTTGTGGTGTTTCTCAACGCAACACAGTAGTGTGACAGACCTCC 2170
Query 965 TCCGTATGACCAAGCTCAGGTATCTCTCTGTATCTTTGAGCGAAAGGTGTACTTTTGAAA 1024
||||||||||||||||||||| | || ||||||||| || |||||||||||||||||||
Sbjct 2171 TCCGTATGACCAAGCTCAGGTTTTTCGGTGTATCTTTTAGTGAAAGGTGTACTTTTGAAA 2230
Query 1025 CCCTATCGTCATCTCTCCGTCAATTGCGTAACCTCGAGACGCTTTA-TTTGGATTT-T-C 1081
||||| ||||||||||||||||| || || || ||||| ||| | ||| |||| | |
Sbjct 2231 ATCTATCTTCATCTCTCCGTCAATTTCGAAAGCTGGAGACACTT-AGTTTC-ATTTATTC 2288
Query 1082 G-GTACAAAACCTATACGGTTGATTATGTGGGAGAGTTGGATCTGGATTTTATTCATCTA 1140
| | ||||||||||| |||||||||||||||||| || | |||||||||||||||||||
Sbjct 2289 GCG--CAAAACCTATATGGTTGATTATGTGGGAGAATTCGTTCTGGATTTTATTCATCTA 2346
Query 1141 AAAGA-GTTAGGATTGACAGGACGTATGTCAAAGATTCCTGATCAACATCAATTCCCTCC 1199
|| || |||| | ||| || || | |||||||||||||||||||||||||||| |||||
Sbjct 2347 AA-GAAGTTAAGTTTGGGAGTACATTTGTCAAAGATTCCTGATCAACATCAATTACCTCC 2405
Query 1200 CCACCTTGAACACATATCTCTATT-TAATTGCCGCATGGAGGAGGATCCAATGCCAATTC 1258
|||| ||| |||||||| | |||| | ||||| ||||||||||||||||||||||||||
Sbjct 2406 CCACATTGCACACATATATTTATTGTT-TTGCCACATGGAGGAGGATCCAATGCCAATTC 2464
Query 1259 TAGAAAAGTTGCTTCATTTGAAGTCGGTTAAATTAGGATCTG-ACG-CTTTCGTTGGGAG 1316
||||||||||||||||| ||||||||||| ||||| || | | | | ||||| | |||||
Sbjct 2465 TAGAAAAGTTGCTTCATCTGAAGTCGGTTGAATTAAGA-C-GCAAGGCTTTCATAGGGAG 2522
Query 1317 GAAAATGTTGTGCTCAAAAGGTGGATTTCCTCAATTACGTGCTCTAGAAATATATGAAGA 1376
|| |||| ||||||||||||| || ||||||||||||||||||||| |||||| |||| |
Sbjct 2523 GAGAATGGTGTGCTCAAAAGGCGGGTTTCCTCAATTACGTGCTCTACAAATATCTGAACA 2582
Query 1377 ATCAGAGTTGGAAGAGTGGATAGTGGAAGAAGGGTCGATGCCATGTCTTCGT-ACTTTAA 1435
||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct 2583 ATCGGAGTTGGAAGAGTGGATAGTAGAAGAAGGGTCGATGCCATGTCTTCGTGA-TTTAA 2641
Query 1436 CTATAGAT-GATTGCAAAAAGTTGAAGGAACTTCCTGATGGACTCAAGTACATAACATCC 1494
|||| || | |||| |||||||| ||||||||||||| ||||||||||| ||||||||
Sbjct 2642 TTATACATAG-TTGCGAAAAGTTGGAGGAACTTCCTGACGGACTCAAGTATGTAACATCC 2700
Query 1495 TTAAAGGAACTGAAGATTAAAAGAATGAAGAGGGAGTGGAAGGAGAAATTGGT 1547
|||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 2701 TTAAAGGAACTGAAGATTGAAGGAATGAAGAGGGAGTGGAAGGAGAAATTGGT 2753
Score = 444 bits (240), Expect = 1e-123
Identities = 326/368 (89%), Gaps = 4/368 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGCCATGGGAAAGGAAATGGTCAAACATTGTGGAGGACTACCATTAGCTGTTAAA 60
||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 1150 ATGGAAGCCATCGGAAAGGAAATGGTCACATATTGTGGAGGACTACCATTAGCTGTTAAA 1209
Query 61 GTGTTGGGAGGCTTGTTAGTTAATAAACATACAGTTCA-TGAGTGGAAAAGAGTTTCTGA 119
|| |||||||||||||||| |||||||||||||| | | |||||||||||||||| |||
Sbjct 1210 GTTTTGGGAGGCTTGTTAGCTAATAAACATACAGCT-AGTGAGTGGAAAAGAGTTAGTGA 1268
Query 120 CAATATCGGAGATCAAATCGTAGGAAAATCTTGCTTAAATGACAACAGTCTCAATTCGGT 179
|||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 1269 GAATATCGGAGCTCAAATCGTAGGAAAATCGTGCTTAGATGACAACAGTCTCAATTCGGT 1328
Query 180 TAACCGAATATTGTCTCTGAGTTATGAAGATTTGCCAACGCATTTAAAGCATTGCTTCCT 239
| |||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 1329 TTACCGAATATTGTCTTTGAGTTATGAAGATTTGCCAACGGATTTAAAGCATTGTTTCCT 1388
Query 240 TTATCTAGCCCATTACCGGGAAGATTCCAAGATATATATGTGGA-ATTTGTTCAATTACT 298
||| |||||||||| || ||||||| ||||||| | | ||| ||| || || |||||
Sbjct 1389 TTACCTAGCCCATTTCCCTGAAGATTACAAGATAAAGACACGGACATT-GTACAGTTACT 1447
Query 299 GGGCTGCAGAAGGAATTTGTTATGGATCAACCATCAGAGATAGTGGAGAAGACTACCTAG 358
|||| ||||| ||||||| |||||| ||||||| ||||||||||||||||||||||
Sbjct 1448 GGGCCGCAGAGGGAATTTACGATGGATTAACCATCCTTGATAGTGGAGAAGACTACCTAG 1507
Query 359 AAGAGCTA 366
|||| |||
Sbjct 1508 AAGAACTA 1515
> AT1G53350.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:19903899-19907515 FORWARD LENGTH=2784
Length=2784
Score = 819 bits (443), Expect = 0.0
Identities = 959/1199 (80%), Gaps = 72/1199 (6%)
Strand=Plus/Plus
Query 372 TGACATGATGAGAGAAGTATGTTTATCTAAAGCCAAAGAAGAGAGCTTCCTACAAATTAT 431
|||||||||||||||||||||||||||||||||||||||||||| ||| | | | || |
Sbjct 1476 TGACATGATGAGAGAAGTATGTTTATCTAAAGCCAAAGAAGAGAACTTTATTCGAGTTGT 1535
Query 432 CAAAGTCCCTACTTCCAC-A-T-CTACCATCAATGCTCAATCTCCTAGTAGATCTCGCAG 488
|||||||||||| | || | | ||||||||||||| ||||||||| |||||||||||||
Sbjct 1536 CAAAGTCCCTACAACTACAAGTACTACCATCAATGCACAATCTCCTTGTAGATCTCGCAG 1595
Query 489 AC-TCACCATACGTAGTGGTAAAGC-CTTTCATATACTGGGACACAAAAACAATAAAAAA 546
|| | | ||| ||||||||| || | ||||||| |||||||| ||| | |||||||||
Sbjct 1596 ACTTGTTC-TACATAGTGGTAATGCAC-TTCATATGCTGGGACATAAAGATAATAAAAAA 1653
Query 547 GTCAGATCTCTTATAG-T-TTTGGGACTCGAGGAAGACTTTTGGATACAGTCAGCTTC-A 603
| ||||||| ||| | | ||| ||| |||||||| | |||||| | || | | || |
Sbjct 1654 GCCAGATCT-GTATTGATATTT-GGAGTCGAGGAAAAGTTTTGG--A-AG-C--C-TCGA 1704
Query 604 -GTCTTCCAAAATTTACCATTGCTCAGGGTGTTGGATCTTACTGAGGTGA-AGTTTAAAG 661
|| |||||| ||| || ||||| || ||||| |||||| || | || | ||||| |||
Sbjct 1705 GGT-TTCCAATGTTTGCCTTTGCTTAGAGTGTTAGATCTTTCTTACGT-ACAGTTTGAAG 1762
Query 662 GAGGGAAGTTACCTTCTAGTATTGGAGGGCTTATCCACTTGAGATTCTTGAGCTTAGACG 721
||||||||||||| || || ||||||| || || ||||||||||||||||||||| |||
Sbjct 1763 GAGGGAAGTTACCATCCAGCATTGGAGATCTCATTCACTTGAGATTCTTGAGCTTATACG 1822
Query 722 ATGCTGGGGTATCTCAGCTACCTTCTTCTATGCGGAATTTAAAGCTTCTCCTCTATTTAG 781
| ||||| |||||||| |||||||||||| || ||||| |||||||||| |||| ||| |
Sbjct 1823 AGGCTGGAGTATCTCATCTACCTTCTTCTCTGGGGAATCTAAAGCTTCTGCTCTGTTT-G 1881
Query 782 -ACTTAAGTGTTGCTG-CCGAGGAACCAGTTCATGTGCCAAATGTTTTGAAAGAGATGCT 839
||||| ||||||||| || | || ||||||||||||||||||||||||||||||||
Sbjct 1882 AACTTAGGTGTTGCTGATCG-GTTACTAGTTCATGTGCCAAATGTTTTGAAAGAGATGCA 1940
Query 840 AGAGTTGAGGAACCTT-GTCCTACCTCATA-AGATGCATGATAAAACCAAGTTGGAATTG 897
||| ||||| ||||| | | |||||| | | |||| || ||||||||||||||||||
Sbjct 1941 AGAACTGAGGTACCTTCG-CTTACCTCGTTCA-ATGCCTGCTAAAACCAAGTTGGAATTA 1998
Query 898 GGTGATCTAGTGAACCT-G-GTGCACTTGTGGTATTTCTCAACGCAACACAGTAGTGTGA 955
||||||||||||||| | | || | ||| | ||||||||||| ||||| |||||||||
Sbjct 1999 GGTGATCTAGTGAACTTAGAGT-CG-TTGACGAATTTCTCAACGAAACACGGTAGTGTGA 2056
Query 956 CAGACCTCCTCCGTATGACCAAGCTCA-GGTATCTCT-C-TGTATCTTTGAGCGAA-AGG 1011
| ||||||||||||||||| |||||| ||| |||| | || || ||| || | ||
Sbjct 2057 CGGACCTCCTCCGTATGACTAAGCTCTCGGT-TCTCAACGTG-AT-TTTCAGTGGCGAG- 2112
Query 1012 TGTACTTTTGAAACCCTATCGTCATCTCTCCGTCAATTGCGTAACCTCGAGACGCTTTA- 1070
|||||||| ||||| |||| || |||||| ||| | ||| | || |||||||||||| |
Sbjct 2113 TGTACTTTCGAAACTCTATTGTTATCTCTTCGTGAGTTGAGAAATCTCGAGACGCTT-AG 2171
Query 1071 TTTGGAT--TTTCGGTACAAAAC-CTATACGGTTG-AT-T-ATGTGGGAGAG-T--TGGA 1121
||| || |||| | |||| | | || | | | | ||| ||||||| | | |
Sbjct 2172 TTTTCATGATTTCC--A-AAAAGTC-AG-CG-TGGCAAATCATGGGGGAGAGCTCCTCGT 2225
Query 1122 TCTGGATTTTATTCATCTAAAAGAGTTAGGATTGACAG-GACGTATGTCAAAGATTCCTG 1180
||| ||||||||||||||||| || ||| |||| || | | | || ||| | |||| |
Sbjct 2226 TCTTGATTTTATTCATCTAAAGGATTTAACATTGTCAATG-CATCTGCCAAGGTTTCCGG 2284
Query 1181 ATCAACATCAATTCCCTCCCCACCTTGAACACATATCTCTATTTA-ATTGCCGCATGGAG 1239
||||| | | ||||||||| ||||||| ||||||| ||| | || |||||||||||
Sbjct 2285 ATCAATACCGATTCCCTCCTCACCTTGCCCACATATGGCTAATCGGAT-GCCGCATGGAG 2343
Query 1240 GAGGATCCAATGCCAATTCTAGAAAAGTTGCTTCATTTGAAGTCGGTTAAA-TTAGGATC 1298
|| ||||||||||| |||||||| ||||||||||||||||| |||||| | || |||
Sbjct 2344 GAAGATCCAATGCCGATTCTAGAGAAGTTGCTTCATTTGAAATCGGTTTATCTTTC-ATC 2402
Query 1299 TGACGCTTTCGTTGGGA-GGAAAATGTTGTGCTCAAAAGGTGGATTTCCTCAATTACGTG 1357
| || ||| |||||| ||| |||| ||||||| ||||| |||||||||||| ||| ||
Sbjct 2403 CGGTGCATTC-TTGGGAAGGAGAATGGTGTGCTCGAAAGGCGGATTTCCTCAACTACTTG 2461
Query 1358 CTCTAGAAATATATGAAGAATCA-GAGTTGGAAGAGTGGATAGTGGAAGAAGGGTCGATG 1416
||||| |||| | | | || | ||||||| |||||||| ||| |||||||||||||||
Sbjct 2462 CTCTAAAAATGTC-GTATAAAAAAGAGTTGGTAGAGTGGAGAGTAGAAGAAGGGTCGATG 2520
Query 1417 CCATGTCTTCGTACTTTAACTATAGATGATTGCAAAAAGTTGAAGGAACTTCCTGATGGA 1476
||||||||||||||| | |||||||| ||||||| ||||||||| ||||||| |||||
Sbjct 2521 CCATGTCTTCGTACTCTGACTATAGACAATTGCAAGAAGTTGAAGCAACTTCCGGATGGG 2580
Query 1477 CTCAAGTACATAACATCCTTAAAGGAACTGAAGATTA-AAAGAATGAAGAGGGAGTGGA 1534
||||| ||| |||||| |||||||||||||||||| | |||||||||| ||||||||||
Sbjct 2581 CTCAAATACGTAACATGCTTAAAGGAACTGAAGAT-AGAAAGAATGAAAAGGGAGTGGA 2638
Score = 289 bits (156), Expect = 7e-77
Identities = 314/385 (82%), Gaps = 32/385 (8%)
Strand=Plus/Plus
Query 4 GAAGCCATGGGAAAGGAAATGGTCAAACATTGTGGAGGACTACCATTAGCTGTTAAAGTG 63
||||||||||||||||| ||||||| | |||||||||||||||| ||||| |||||||||
Sbjct 1033 GAAGCCATGGGAAAGGAGATGGTCACATATTGTGGAGGACTACCGTTAGCCGTTAAAGTG 1092
Query 64 TTGGGAGGCTTGTTAGTTAATAAACATACAGTTCAT-GAGTGGAAAAGAGTTTC-TGA-C 120
||||||| ||||||| ||| ||||||||||||| | ||||||||||||| | | | | |
Sbjct 1093 CTGGGAGGGTTGTTAGCTAAGAAACATACAGTTC-TAGAGTGGAAAAGAG-TACAT-AGC 1149
Query 121 AATATCGGAGA-TCAAATCGTAGGAAAATCTTGCTTAAATGACAAC-AGTCTCAATTCGG 178
||||| | | | ||| || |||||||||||| | |||| |||| || | || ||| ||||
Sbjct 1150 AATATTGTA-ACTCATATAGTAGGAAAATCTGGTTTAAGTGACGACAATTC-CAACTCGG 1207
Query 179 TTAACCGAATATTGTCTCTGAGTTATGAAGATTTGCCAACGCATTTAAAGCATTGCTTCC 238
|| ||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||
Sbjct 1208 TTTACCGAGTATTGTCTCTGAGTTATGAAGATTTGCCTATGCAGTTAAAGCATTGCTTCT 1267
Query 239 TTTATCTAG-CCCATTA-CCGGGAAGATTCCAAGATATATATGTGGA-ATTTGTTCAATT 295
|||| || | |||||| || | |||||| ||||||| || || || ||| ||||||||
Sbjct 1268 TTTA-CTTGGCCCATTTTCCTG-AAGATTACAAGATAGATGTGAAGATATT-GTTCAATT 1324
Query 296 ACTGGGCTGCAGAAGGAATT-T---G---TT--ATG--G-ATCAACCAT-CAGAGATAGT 342
| |||| |||||||||||| | | || ||| | ||||||||| || ||||| |
Sbjct 1325 ATTGGGTTGCAGAAGGAATAATAACGCCGTTTCATGATGGATCAACCATTCA-AGATACT 1383
Query 343 GGAGAA-GACTACCTAGAAGAGCTA 366
|||||| | ||| ||||||||||||
Sbjct 1384 GGAGAAAG-CTATCTAGAAGAGCTA 1407
> AT1G10920.1 | Symbols: LOV1 | NB-ARC domain-containing disease
resistance protein | chr1:3644420-3647768 REVERSE LENGTH=2847
Length=2847
Score = 710 bits (384), Expect = 0.0
Identities = 961/1225 (78%), Gaps = 97/1225 (8%)
Strand=Plus/Plus
Query 372 TGACATGATGAGAGAAGTATGTTTATCTAAAGCCAAAGAAGAGAGCTTCCTACAAAT-TA 430
||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |||| |
Sbjct 1621 TGACATGATGAGAGAAGTATGTTTATCAAAAGCCAAAGAGGAGAACTTCCTAGAAATCT- 1679
Query 431 TCAAAGTCCCTACTTCCACATCTACCATCAATGCTCAATCTCCTAGTAGATCTCGCAGAC 490
|||||||| |||| |||| ||| |||||||||||| ||||| ||| | |||||||||||
Sbjct 1680 TCAAAGTCTCTACAGCCACCTCTGCCATCAATGCTCGATCTCTTAGCAAATCTCGCAGAC 1739
Query 491 TCACCATACGTAGTGGTAAAG-CCTTTCATA-TACTGGGACACAA-AAACAATAAAAAAG 547
|| || ||| | ||||||| | |||| || | | ||||||| || || |||||||||||
Sbjct 1740 TCTCCGTACATGGTGGTAATGCCCTTCCA-AGT-TTGGGACA-AACAATCAATAAAAAAG 1796
Query 548 TCAGATCTCTTATAGT-TTTGGGACTCGAGGAAGACTTTTGGATAC---AGT---CAGCT 600
||||||||||| | || ||| | ||||||| || ||||| |||| ||| || |
Sbjct 1797 TCAGATCTCTT-TTGTATTTTGCTTTCGAGGATGAGTTTTGTATACTAGAGTCAACAACC 1855
Query 601 TCAGT-CTTCCAAAATTTACCATTGCTCAGGGTGTTGGATCTTACT-GAGGTGAAGTTTA 658
|| | ||||| || |||||||||||| ||||||||||||||| || | ||| ||||||
Sbjct 1856 CCA-TGCTTCCGAAGTTTACCATTGCTTAGGGTGTTGGATCTTTCTCG-GGTAAAGTTTG 1913
Query 659 AAGGAGGGAAGTTACCTTCTAGTATTGGAGGGCTTATCCACTTGAGATTCTTGAGCTTAG 718
||||||||||||||||||| || ||||||| || ||||||||||||||||||||||||
Sbjct 1914 AAGGAGGGAAGTTACCTTCCAGCATTGGAGATCTCATCCACTTGAGATTCTTGAGCTTAC 1973
Query 719 A-CGATGC-TGGGGTATCTCAGCTACCTTCTTCTATGCGGAAT-TTAAAGCTTCTCCTCT 775
| || || | || ||||||| |||||||||||| |||||||| || |||||||| ||||
Sbjct 1974 ACCG-GGCAT-GGATATCTCATCTACCTTCTTCTCTGCGGAATCTT-AAGCTTCTGCTCT 2030
Query 776 ATTTAG-ACTTAAGTGTTGCTGCCGA-GGAACCAGTTCATGTGCCAAATGTTTTGAAAGA 833
|||| | |||| | | ||| | | || | ||||||||||||||||||||||||||
Sbjct 2031 ATTT-GAACTT--G-G--GCT-TCAATGGGA-TGGTTCATGTGCCAAATGTTTTGAAAGA 2082
Query 834 GATGCTAGAGTTGAGGAACCTT--GTCCTACCTCATAAGA-TGCATGATAAAACCAAGTT 890
||||| ||| ||||| ||||| || ||||| || | ||||||||||||| |||||
Sbjct 2083 GATGCAAGAACTGAGGTACCTTCAGT--TACCT-ATGTCAATGCATGATAAAACAAAGTT 2139
Query 891 GGAATTGGGTGATCTAGTGAACCTGGTGCACTTGTGGT-A-TTTCTCAACGCAAC-ACAG 947
||||||| |||| ||||||||||||| | ||| || | | ||| ||||| || || |
Sbjct 2140 GGAATTGAGTGACCTAGTGAACCTGGAGT-CTT-TGATGAATTTTTCAACA-AAGTAC-G 2195
Query 948 -TAGTGTGACAGACCTCCTCCGTATGACCAAGCTCAGGTATCTCTCTGTATCT-TTGAGC 1005
|||||||| |||||||||| |||||| ||||| ||| | ||| | ||| | || | |
Sbjct 2196 CTAGTGTGATGGACCTCCTCCATATGACTAAGCTAAGGGAGCTCAGTCTATTTATT-A-C 2253
Query 1006 -GAAAGGTGTACTTTTGAAACCCTATCGTCATCTCTCCGTCAATTGCGTAACC-TCGAGA 1063
|| || || || ||| || |||||||||||||| |||||||| | | || | |||
Sbjct 2254 TGAC-GG-GT-CTAGTGACACTCTATCGTCATCTCTTGGTCAATTGAG-ATCCCTGGAGG 2309
Query 1064 CGCTTTATTTGGATTTTCGGTACAA-AACCTA-TACGG-TTGATTATGTGGGAGAG-TTG 1119
|||| |||| || | || ||| ||||| | | || || ||| |||||| |||
Sbjct 2310 TGCTTCATTTATATGATAGG--CAAGAACCTCGTGTAGCTT-ATCATGGGGGAGAAATTG 2366
Query 1120 GATCTGGATTTTATTCATCTAAAAGAGTTAG-GATTGAC-AGGACGTATGTCAAAGATTC 1177
|||| ||| |||||| ||||| || |||| | ||| | | || |||| ||| | |||
Sbjct 2367 T-TCTGAATTGTATTCACCTAAAGGAATTAGAG-TTGGCGAT-ACATATGCCAAGGTTTC 2423
Query 1178 CTGATCAACATCAATTCCCTCCCCACCTTGAACACATATCTCTATT-TAATTGCCGCATG 1236
|||||||| ||| ||||| |||||||||| |||||||| ||||| | |||| |||||
Sbjct 2424 CTGATCAATATCTATTCCATCCCCACCTTTCACACATATATCTATGGTG-TTGCAGCATG 2482
Query 1237 GAGGAGGATCCAATGCCAATTCTAGAAAAGTTGCTTCATTTGAAGTCGGTTAAATTAGGA 1296
|||||||||||||| || ||||| |||| | |||| ||||||||||| |||| |||| |
Sbjct 2483 GAGGAGGATCCAATCCCGATTCTTGAAAGGCTGCTGCATTTGAAGTCAGTTATATTAACA 2542
Query 1297 TCTGACGCTTTCGTTGGGAGGAAAATGTTGTGCTCAAAAGGTGGATTTCCTCAATTACGT 1356
| || |||||||| || |||| |||| ||||||||||||| || |||||||||||| ||
Sbjct 2543 TTTGGTGCTTTCGTCGGAAGGAGAATGGTGTGCTCAAAAGGCGGTTTTCCTCAATTATGT 2602
Query 1357 GCTCTAGAAATATATGAAGAA-TC-AG-AGTTGGAAGAGTGGATAGTGGAAGAAGGGTCG 1413
| || ||| || |||||| | || ||||||||||||||||||| ||||||||| ||
Sbjct 2603 TTTTTA-AAAC-TA-GAAGAACTAGAGGAGTTGGAAGAGTGGATAGTAGAAGAAGGG-CG 2658
Query 1414 ATGCCA-TGTCTTCGTACTTTAACTATA-GATGATTGCAAAAAGTTGAAGGAACTTCCTG 1471
|||||| | ||||||| |||| |||||| | | |||||| |||||||||| ||||| |
Sbjct 2659 ATGCCACT-TCTTCGTGCTTTGACTATATG-TAATTGCAGAAAGTTGAAG---CTTCCGG 2713
Query 1472 ATGG-ACTCAAGTACATAACATCCTTAAAGGAACTGA-AGATTAAAAGAATGAAGAGGGA 1529
||| | |||| |||||||| |||||||||||| ||| | ||| | ||||||||
Sbjct 2714 GTGGGA-TCAATTACATAACCTCCTTAAAGGAATTGACA-ATTGTAGGAATGAAG----- 2766
Query 1530 GTGGAAGGAGAAATTGGTACCAGGT 1554
|||||||||||| ||||||| |||
Sbjct 2767 -TGGAAGGAGAAACTGGTACCGGGT 2790
Score = 274 bits (148), Expect = 2e-72
Identities = 310/384 (81%), Gaps = 27/384 (7%)
Strand=Plus/Plus
Query 1 ATGGAAGCCATGGGAAAGGAAATGGTCAAACATTGTGGAGGACTACCATTAGCTGTTAAA 60
|||||||||||||||||||||||||||| |||||||||||||||||| || ||||||
Sbjct 1178 ATGGAAGCCATGGGAAAGGAAATGGTCACGTGTTGTGGAGGACTACCATTGGCCGTTAAA 1237
Query 61 GTGTTGGGAGGCTTGTTAGTTAATAAACATACAGTTCATGAGTGGAAAAGAGTTTCTGAC 120
|| ||||||||||| |||| || ||||||||||||| |||||||||||||| | ||||
Sbjct 1238 GTTTTGGGAGGCTTATTAGCTACGAAACATACAGTTCCCGAGTGGAAAAGAGTATATGAC 1297
Query 121 AATATCGGAGATCAAATCGTAGGAAAATCTTGCTTAAATGACAACAGTCTCAATTCGGTT 180
||||| ||| || ||| ||||| |||| ||||| ||||||| |||||||||| ||
Sbjct 1298 AATATTGGACCCCATCTCGCAGGAAGATCTAGCTTAGATGACAA---TCTCAATTCGATT 1354
Query 181 AACCGAATATTGTCTCTGAGTTATGAAGATTTGCCAACGCATTTAAAGCATTGCTTCCTT 240
| ||| ||||||||||||| |||||| ||||||||| | |||||||||||||||||||
Sbjct 1355 TATCGAGTATTGTCTCTGAGCTATGAAAATTTGCCAATGTGTTTAAAGCATTGCTTCCTT 1414
Query 241 TATCTAGCCCATTA-CCGGGAAGATTCCAAGATATATATGTG--GA-ATTTGTTCAATTA 296
|| |||||||||| || | || ||| | | | ||| ||||| || ||| |||||||||
Sbjct 1415 TACCTAGCCCATTTTCCCG-AATATTACGA-A-ATACATGTGAAGAGATT-GTTCAATTA 1470
Query 297 CTGGGCTGCAGAAGGAATT-T---GTTAT--G--GAT----CAACCATC-AGAGATA-GT 342
| || ||||||||||| | || || | ||| |||||||| | ||||| |
Sbjct 1471 TTTAGCGGCAGAAGGAATAATAACGTCATCTGACGATGGAACAACCATCCA-AGATAAG- 1528
Query 343 GGAGAAGACTACCTAGAAGAGCTA 366
||||||||||||||||||||||||
Sbjct 1529 GGAGAAGACTACCTAGAAGAGCTA 1552
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78363050745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5