BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg916430 Length=258 Score E Sequences producing significant alignments: (Bits) Value AT5G48953.1 | Symbols: LCR86 | low-molecular-weight cysteine-ri... 344 2e-94 > AT5G48953.1 | Symbols: LCR86 | low-molecular-weight cysteine-rich 86 | chr5:19847711-19848250 REVERSE LENGTH=258 Length=258 Score = 344 bits (186), Expect = 2e-94 Identities = 235/259 (91%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 1 ATGCAAAACAAGAAACAATCACATATATTCATTGCCATAACAATTGTTCTCTTGTTTGCG 60 ||||| ||| ||||||| ||||||||| | | |||||||||||||||||||||||||||| Sbjct 1 ATGCAGAACCAGAAACATTCACATATACTGACTGCCATAACAATTGTTCTCTTGTTTGCG 60 Query 61 ATGGCATATAAAATAAACGCTATTGACGTTCATGACGCCGTTTGTTTTCGGTCAGAGTGT 120 ||||| ||||||||||||||||||||||||||||||| | |||| |||||| |||||| Sbjct 61 ATGGCCGCTAAAATAAACGCTATTGACGTTCATGACGCCATGTGTTATCGGTCCGAGTGT 120 Query 121 ACAAGCGTATGTGAT-ACGATTTGCTTAAGCAAAGGCTATAAAAATGGATGGTATTGTGG 179 ||||||||||||||| | ||||||||||||| | || |||| |||||||||||||||||| Sbjct 121 ACAAGCGTATGTGATCA-GATTTGCTTAAGCCACGGGTATACAAATGGATGGTATTGTGG 179 Query 180 AACATTTAGACTGCACACTGGATGTTGTTGTCTAAAAAAGAAAGAACTCAACCAAATAAT 239 |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 180 AACATTTAGACTCCACACTGGATGTTGTTGTCTCAAGAAGAAAGAACTCAACCAAATAAT 239 Query 240 ATATCCATCAAAAAACTAA 258 || |||||| ||||||||| Sbjct 240 ATCTCCATCGAAAAACTAA 258 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11762653266 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5