BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg916656 Length=1131 Score E Sequences producing significant alignments: (Bits) Value AT2G19500.1 | Symbols: CKX2, ATCKX2 | cytokinin oxidase 2 | chr... 549 2e-155 > AT2G19500.1 | Symbols: CKX2, ATCKX2 | cytokinin oxidase 2 | chr2:8444204-8447355 REVERSE LENGTH=1667 Length=1667 Score = 549 bits (297), Expect = 2e-155 Identities = 353/379 (93%), Gaps = 7/379 (2%) Strand=Plus/Plus Query 1 ATGGCTAATCTTCGTCTAATAATCACAGTTTTGAT--TTGTTTATTCTCGAGCACCAAAT 58 ||||||||||||||| |||| ||||| ||| || |||| | | || |||||||| Sbjct 55 ATGGCTAATCTTCGTTTAATGATCAC---TTTAATCACGGTTT-TAAT-GATCACCAAAT 109 Query 59 CATCAAACGTTATTAAAATTGATTTACCTAAATCCCTTAACCTCACCCTCTCCACTGATC 118 ||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 110 CATCAAACGGTATTAAAATTGATTTACCTAAATCCCTTAACCTCACCCTCTCTACCGATC 169 Query 119 CTTCCATCATCTCCGCCGCCTCTCATGACTTCGGGAACATAACCACCGTGACCCCCGGCG 178 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 170 CTTCCATCATCTCCGCAGCCTCTCATGACTTCGGAAACATAACCACCGTGACCCCCGGCG 229 Query 179 GCGTTATCTGCCCCTCCTCCTCCGCTGATATATCTCGTCTCCTCCAATACGCCGCGAACG 238 |||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| Sbjct 230 GCGTAATCTGCCCCTCCTCCACCGCTGATATCTCTCGTCTCCTCCAATACGCCGCAAACG 289 Query 239 GAAAAAGTACATTCCAAGTAGCGGCTCGTGGCCAAGGCCACTCCTTAAACGGCCAAGCCT 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290 GAAAAAGTACATTCCAAGTAGCGGCTCGTGGCCAAGGCCACTCCTTAAACGGCCAAGCCT 349 Query 299 CGGTCTCCGGCGGAGTAATCGTCAACATGACGTGTCTCACTGACGTGGTGGTTTCAAAAG 358 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 350 CGGTCTCCGGCGGAGTAATCGTCAACATGACGTGTATCACTGACGTGGTGGTTTCAAAAG 409 Query 359 ACAAGAAGTATGCTGACGT 377 |||||||||| |||||||| Sbjct 410 ACAAGAAGTACGCTGACGT 428 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55471602225 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5