BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg916815
Length=1683
Score E
Sequences producing significant alignments: (Bits) Value
AT5G51930.1 | Symbols: | Glucose-methanol-choline (GMC) oxidor... 2019 0.0
AT5G51950.1 | Symbols: | Glucose-methanol-choline (GMC) oxidor... 1086 0.0
AT3G56060.1 | Symbols: | Glucose-methanol-choline (GMC) oxidor... 1014 0.0
> AT5G51930.1 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase
family protein | chr5:21101123-21103568 FORWARD LENGTH=1749
Length=1749
Score = 2019 bits (1093), Expect = 0.0
Identities = 1435/1599 (90%), Gaps = 28/1599 (2%)
Strand=Plus/Plus
Query 90 TACATTTATGAATGATGCAACATTGGCACCAAAGCATGCTCGTTTCAACGACATAACCAT 149
|||||||||||| ||||||||||||||||||||| ||||| ||||| || |||||| |||
Sbjct 174 TACATTTATGAAAGATGCAACATTGGCACCAAAGAATGCTAGTTTCGACTACATAATCAT 233
Query 150 CGGTGGAGGAACCGCAGGTTGTGCATTAGCCGCAACACTCTCTCAAAACGCCAGCGTTTT 209
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 234 CGGAGGAGGAACCGCAGGTTGTGCATTAGCCGCAACGCTCTCTCAAAACGCCAGCGTTTT 293
Query 210 GGTTCTAGAACGCGGTGGCTCGCCCTATGACAATCCCACGGCCAGTGATATTGGCAACTT 269
|||||| |||||||| || ||||| ||||| || |||||||||| |||||| |||||||
Sbjct 294 GGTTCTTGAACGCGGCGGGTCGCCATATGAGAACCCCACGGCCACTGATATGGGCAACTC 353
Query 270 CGCCAACACACTCTTTAACAACACACCGAACTCATGGTCGCAGCATTTCATCTCCGAGGA 329
|| |||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||
Sbjct 354 CGTCAACACACTCTTAAACAACACACCAAACTCATGGTCGCAGCTTTTCATCTCCGAAGA 413
Query 330 CGGCGTTTACAACACACGGCCACGTGTCCTCGGTGGAGGCTCGGTAATAAACGGTGGATT 389
||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct 414 CGGCGTTTACAACACGCGGCCACGTGTCCTCGGTGGAGGGTCGGTGATAAACGGAGGATT 473
Query 390 CTACACGCGTGCGGGCGATGATTACGTGGATGAAGCTGAGTGGGAGATGGAGGAAGTGGA 449
|||| ||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 474 CTACTCGCGTGCGGGCAATGATTACGTGGAGGAAGCTGAGTGGGAGATGGAAGAAGTGGA 533
Query 450 AGCTTCTTACCAGTGGGTCGAGAAGAAACTTGTGTTCAAGCCACAAGTGATGGGATGGCA 509
|||| ||||| |||||||||||||||||||||||||| |||||||||| || | ||||||
Sbjct 534 AGCTGCTTACGAGTGGGTCGAGAAGAAACTTGTGTTCGAGCCACAAGTAATAGAATGGCA 593
Query 510 ATCGGCGTTCAAAGATGGGCTTTTGGAGGCTGGAGAGTTTCCGGACAATGGTTTCACGTA 569
| |||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||||
Sbjct 594 AAAGGCGTTTAAAGATGGGCTTCTGGAGGCTGGAGAGTCTCCGGACAACGGTTTCACGTA 653
Query 570 CGATCATATCTACGGGACTAAGATCGGTGGTACGATCTTTGACCATGCCGGTCATAGACA 629
||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||||||
Sbjct 654 CGATCATATCTACGGCACTAAGATCGGTGGTACAATCTTTGACCGTGCTGGTCATAGACA 713
Query 630 TACCGCGGCCAATTTGTTAGAGTATGCTGATCCGGAGGC-GATTGTTGTTTACTTGCATG 688
||||||||| ||| |||||||||||||| |||| | | ||||||||||||||||||||
Sbjct 714 TACCGCGGCGAATCTGTTAGAGTATGCTAATCC-CAACCGGATTGTTGTTTACTTGCATG 772
Query 689 CTTATGTTCAC-AAGATCCTCTTCACCACCAAAGGTAGCCAGAAACCAAAAGCATACGAA 747
||| ||||||| ||| |||||||||||||| | | || | | || |||
Sbjct 773 CTTCTGTTCACAAAG-TCCTCTTCACCACC----G-A---AG----C----G--TATGAA 813
Query 748 GTGATATTTGAGGACGCAAATGGAATGTTCCACAAGGCAGAGCTAGCAAATAACGCAATG 807
||| |||||||||| ||||||||| |||||||||||||| | ||||||||||| |||| |
Sbjct 814 GTGCTATTTGAGGATGCAAATGGAGTGTTCCACAAGGCAAATCTAGCAAATAAGGCAACG 873
Query 808 AACGAAGTGATCTTGTCTGCTGGAGCAATGGGTAGCCCGCAACTGTTGATGCTAAGTGGC 867
||||||||||||||||| |||||||| |||||||||| ||||| || ||| | |||||
Sbjct 874 AACGAAGTGATCTTGTCAGCTGGAGCCCTGGGTAGCCCACAACTATTAATGTTGAGTGGA 933
Query 868 GTAGGTCCTGCAGCCCATCTTGCGGCTCACGGCGTGAATCCACTCGTCCTAGATCA-CCC 926
||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||| |||
Sbjct 934 GTAGGTCCTGCCGTCCATCTTGAGGCTCACGGCGTGAACCCACTCGTCCTAGATCAGCCC 993
Query 927 TATGGTTGGGCATGAGATCGCTGATAATCCCATGAACGTTGTATTCATCCCTTCTCCTCA 986
||||||||||| | ||| |||||||||||||||||| ||||| ||| |||||||||||
Sbjct 994 -ATGGTTGGGCAGGGGATGGCTGATAATCCCATGAACTTTGTAGCCATTCCTTCTCCTCA 1052
Query 987 ACCAGTAGAAGTGTCCCTCATACAAACTGTTGGGATCACAAAGTTTGATAGTTACATTGA 1046
|||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1053 ACCAGTAGAACTATCCCTCATACAAGCTGTTGGGATCACAAAGTTTGATAGTTACATTGA 1112
Query 1047 AGGTGGAAGTGGCTTGAGTCTCTCTTTTGACT-TGACCCGTAGGTTTTTCGATGGTGTTT 1105
|||| |||||||||||||||||||||||| | | || ||||||||||||||||||||||
Sbjct 1113 AGGTCTAAGTGGCTTGAGTCTCTCTTTTGA-TATAACTCGTAGGTTTTTCGATGGTGTTT 1171
Query 1106 TGAATCTTTTTAACGAGACAAGCCGTACTACATCTAGGAATATCCTGACCCACTCTATTG 1165
|||||||||| ||||||||||| | ||||||||||||||| ||||||||||| || ||||
Sbjct 1172 TGAATCTTTTAAACGAGACAAGTCATACTACATCTAGGAAAATCCTGACCCAATCCATTG 1231
Query 1166 AAGTCCTTTTGAAATCTTTGGATCTTGGATTGGACGTAATGATTAATGGGGGTTTGATCG 1225
||||||||| |||||||| ||| || |||||| || | ||| |||||||||||||||
Sbjct 1232 CAGTCCTTTTAAAATCTTTTGATGTTAAATTGGAAGTGAGGATGAATGGGGGTTTGATCT 1291
Query 1226 TTCAAAAAATCGATGGACCGGCCTCAAAAGGACACATGGAGCTCCGGAACACGGACCCAA 1285
|||||||| ||||||||||||||||||||||||| ||| |||| ||||||||| ||||||
Sbjct 1292 TTCAAAAAGTCGATGGACCGGCCTCAAAAGGACATATGAAGCTACGGAACACGAACCCAA 1351
Query 1286 GGGATAACCCTTCAGTGACATTCAACTACTATCAAGAACCTGAGGATTTGAACAAGTGTG 1345
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1352 GGGATAATCCTTCAGTGACATTCAACTACTATCAAGAACCAGAGGATTTGAACAAGTGTG 1411
Query 1346 TTAAAGGGCTTAACACCGTTATTCAGAC-GATAAATTCTAAAGCCTTCTCCAAGTACAAG 1404
||||||||||||||||| ||||| ||| ||||||||| ||||| |||||||||||||||
Sbjct 1412 TTAAAGGGCTTAACACCATTATT-AGAATGATAAATTCCAAAGCTTTCTCCAAGTACAAG 1470
Query 1405 TACCCAGGTGTGACCGCACGTGAGCTGCTCAATCTCATGTTGGGCCTTCCCATCAATCTG 1464
|| || |||||||| |||||||| ||||||||||||||||||| ||||||||||||| ||
Sbjct 1471 TATCCGGGTGTGACGGCACGTGAACTGCTCAATCTCATGTTGGCCCTTCCCATCAATTTG 1530
Query 1465 AGGACAAGGCACGTGACCTCAACGTTCAACTTGACGCAGTTTTGCATCGACACTGTGATG 1524
||| ||||||||||||||||| |||||||||||| |||||||||||||||||| |||| |
Sbjct 1531 AGGCCAAGGCACGTGACCTCAGCGTTCAACTTGAAGCAGTTTTGCATCGACACCGTGACG 1590
Query 1525 AGTATTTGGCATTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAGAATTACAAA 1584
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1591 AGTGTTTGGCATTACCATGGAGGTTGCCAAGTTGGAAAAGTGGTTGACAAGAATTACAAA 1650
Query 1585 GTCATAGGCATAGATTCCTTAAGGGTAATCGATGGATCCACATTTCTGAAGTCTCCAGGG 1644
||| ||||||||||| ||||||||| |||||||||||||||||||| |||||||| |||
Sbjct 1651 GTCTTAGGCATAGATGGCTTAAGGGTCATCGATGGATCCACATTTCTCAAGTCTCCCGGG 1710
Query 1645 ACTAATCCCCAAGCCACGGTCATGATGCTTGGAAGGTAA 1683
|||||||| ||||||||||||||||||||||||||||||
Sbjct 1711 ACTAATCCTCAAGCCACGGTCATGATGCTTGGAAGGTAA 1749
> AT5G51950.1 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase
family protein | chr5:21105909-21108605 REVERSE LENGTH=1991
Length=1991
Score = 1086 bits (588), Expect = 0.0
Identities = 1317/1660 (79%), Gaps = 85/1660 (5%)
Strand=Plus/Plus
Query 73 GATAAAGCCGGAC-ATTATACATTTATGAATGATGCAACATTGGCACCAAAGCAT-GCTC 130
|||||||| || | |||| | |||||||| ||||||||||| ||||||| | | ||||
Sbjct 122 GATAAAGCTGG-CTATTACAGTTTTATGAAAGATGCAACATTAGCACCAATG-TTCGCTC 179
Query 131 -GTTTCAACGACATAACCATCGGTGGAGGAACCGCAGGTTGTGCATTAGCCGCAACACTC 189
|||| | |||||| |||||| ||||| || | ||||| || |||||||| || ||
Sbjct 180 GGTTT-GATTACATAATCATCGGAGGAGGGACTTCGGGTTGCGCGTTAGCCGCGACGCTA 238
Query 190 TCTCAAAACGCCAGCGTTTTGGTTCTAGAACGCGGTGGCT-CGCCCTATGACAATCCCAC 248
||||||||||| |||||||||||||| ||||||||||| | | ||||| |||||||| ||
Sbjct 239 TCTCAAAACGCTAGCGTTTTGGTTCTTGAACGCGGTGG-TGCTCCCTACGACAATCCTAC 297
Query 249 GGCCAGTGATATTGGCAACTTCGCCAACACACTCTTTAACAACA-CACCGAACTCATGGT 307
||| | ||||| | ||||| |||| |||||||| ||| ||| ||||||| || ||||
Sbjct 298 GGCAACAGATATCGAAAACTTTGCCACCACACTCTCAAAC-ACATCACCGAAATCTTGGT 356
Query 308 CGCAGCATTTCATCTCCGAGGACGGCGTTTACAACACACG-GCCACGTGTCCTCGGTGGA 366
|||| | ||| |||||||||||||||||||||||||| || | |||| |||||||||||
Sbjct 357 CGCAACTTTTTATCTCCGAGGACGGCGTTTACAACACTCGTG-CACGCGTCCTCGGTGGT 415
Query 367 GGCTCGGTAATAAACGGTGGATTCTACACGCGTGCGGGCGATGATTACGTGGATGAAG-C 425
||||| || |||||| || |||||||| |||||||| ||||| ||||| || | || |
Sbjct 416 GGCTCCGTGTTAAACGCCGGGTTCTACACACGTGCGGGAGATGAGTACGT-GAAGGAGAC 474
Query 426 TGAGTGGGAGA-TGGAGGAAGTGGAAGCTTCTTACCAGTGGGTCGAGAAGAAACTTGTG- 483
||||||| ||| | || |||||||||||| ||||| ||||||||||||||||| | | |
Sbjct 475 TGAGTGGAAGACT-GATGAAGTGGAAGCTGCTTACGAGTGGGTCGAGAAGAAAGTGGCGT 533
Query 484 TTCAAGCCACAAGTGATGGGATGGCAATCGGCGTTCAAAGATGGGCTTTTGGAGGCTGGA 543
||||| || | || ||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 534 TTCAA-CCGCCGGTTCTGGGATGGCAAACGGCGTTTAAAGATGGGCTTTTGGAGGCTGGT 592
Query 544 GAGTTTCCGGACAATGGTTTCACGTACGATCATATCTACGGGACTAAGATCGGTGGTACG 603
|||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 593 GAGTTTCCTTACAATGGTTTCACGTATGATCATATCTATGGGACTAAGATCGGTGGTACG 652
Query 604 ATCTTTGACCATGCCGGTCATAGACATACCGCGGCCAATTTGTTAGAGTATGCTGATCCG 663
|||||||||| ||| ||||||||||| || || || ||||||| || |||||| |||||
Sbjct 653 ATCTTTGACCGTGCTGGTCATAGACACACGGCCGCTGATTTGTTGGAATATGCTAATCCG 712
Query 664 GAGGCGA--TTGTTGTTTACTTGCATGCTTATGTTCACAAGATCCTCTTCACCACCAAAG 721
| | | | ||||||| ||||||||||| | |||||||||||||||||||||||||||||
Sbjct 713 G-G-CAACATTGTTGTCTACTTGCATGCCTCTGTTCACAAGATCCTCTTCACCACCAAAG 770
Query 722 GTAG-CCAGAAACCAAAAGCATACGAAGTGATATTTGAGGACGCAAATGGAATGTTCCAC 780
| || ||| | ||||||||||||| |||||||||| | ||||| || ||| |||| |||
Sbjct 771 GAAGGCCA-AGGCCAAAAGCATACGGAGTGATATTTCAAGACGCGAACGGAGTGTTACAC 829
Query 781 AAGGCAGAGCTAGCA-AATAACGCAATGAACGAAGTGATCTTGTCTGCTGGAGCAAT-GG 838
||||||||| ||| | || || |||||||||| ||||| ||||| || || || || ||
Sbjct 830 AAGGCAGAGTTAG-AGAAGAATTCAATGAACGAGGTGATTTTGTCCGCGGGGGCGATTGG 888
Query 839 GTAGCCCGCAACTGTTGATGCTAAGTGGCGTAGGTCCTGCAGCCCATCTTGCGGCTCACG 898
| ||||||||| |||||||||| || ||| ||||||| ||||| ||||| ||||||||||
Sbjct 889 G-AGCCCGCAATTGTTGATGCTGAGCGGCATAGGTCCCGCAGCTCATCTCGCGGCTCACG 947
Query 899 GCG-TGAATCCACTCGTCCTAGATCACCCTATGGTTGGGCATGAG-ATCGCTGATAATCC 956
| | | || || | ||| ||||||| || ||||| ||||| | | || | ||||||||
Sbjct 948 G-GATTAAACCGTTGGTCTTAGATCATCCGATGGTAGGGCAAG-GTATGGGAGATAATCC 1005
Query 957 CATGAACGTTGTATTCATCCCTTCTCCT-CAACCAGTAGAAGTGTCCCTCATACAAA-CT 1014
|||||| | |||| || ||||||||| | || || || || || || |||||| |
Sbjct 1006 CATGAATGCCATATTTATTCCTTCTCCTACGCCC-GTGGAGGTTTCTCTAATACAAGTC- 1063
Query 1015 GTTGGGATCACAAAGTTTGATAGTTACATTGAAGGTGGAAGTGGCT-TGAGTCT-CTCTT 1072
||||| |||||||||||||| |||||||| ||||| | |||||| | | | ||| ||| |
Sbjct 1064 GTTGGAATCACAAAGTTTGAAAGTTACATAGAAGGAGCAAGTGG-TGTAA-TCTTCTCAT 1121
Query 1073 TTGACTTG-ACCCGTAGGTTTTTCGATGGTGTTTTGAATCTTTTT-AACGAGA--CA-A- 1126
| | ||| || ||||| ||||||||||||||||||||| | | | ||||||| || |
Sbjct 1122 AT-AGTTGGACTCGTAGATTTTTCGATGGTGTTTTGAAT-TATCTCAACGAGATGCAGAC 1179
Query 1127 --GCCGTACTAC-A-T-CTAGGAA-T--ATC-CTG---ACCCACTCTATTGA-AG-TCCT 1172
|||||||||| | | ||| | | | | ||| ||||| || || | || | |
Sbjct 1180 AAGCCGTACTACTAGTACTAC-ATCTCCAACACTGTCGACCCAATCCATC-ACAGATT-T 1236
Query 1173 TTTGAAATCTT-TGGATCTTGGATTGGACG-TA--ATGATTAATGGGGGTTTGATCGTTC 1228
||| || || | ||| | |||| | | || | || | | ||||||||| | |
Sbjct 1237 TTTCAA-TCCCATCAATCCTCTATTGAATGCTACCACGAG-A--GCCGGTTTGATCCTCC 1292
Query 1229 AAAAAATCGATGGACCGGCCTCAAAAGGACACATGGAGCTCCGGAACACGGACCCA-AGG 1287
| ||||||| |||||| ||| | ||| || | ||||| ||||||| |||| | |
Sbjct 1293 AGAAAATCGCGGGACCGATCTCGAGAGGTCATTTAGAGCTTAGGAACACAAACCCGGATG 1352
Query 1288 GATAACCCTTCAGTGACATTCAACTACTATCAAGAACCTGAGGATTTGA-ACA-AGTGTG 1345
|||| |||||||| | |||||||| |||||||| || |||||| | | | | | ||||
Sbjct 1353 -ATAATCCTTCAGTAAGGTTCAACTATTATCAAGAGCCAGAGGATCT-ACAGATA-TGTG 1409
Query 1346 TTAAAGGGCTTAACACCGTTATTCA-GACGATAAATTCTAAAGCCTTCTCCAAGTACAAG 1404
|| ||||| | |||||| ||||| | | ||| || || || || |||||||| | ||||
Sbjct 1410 TTGAAGGGATCAACACCATTATTAAAGT-GATCAACTCCAAGGCATTCTCCAAATTCAAG 1468
Query 1405 TACCCAGGT-GTGACCGCACGTG-AGCTGCTCAATCTCATGTTGGGCCTTCCCATCAATC 1462
||||| || | |||| || || | || ||| |||| ||| | || |||| | |||||
Sbjct 1469 TACCC-GGACGCGACCATACATGGA-CTACTCGATCTAATGCTAAGCGTTCCTACCAATC 1526
Query 1463 TGAGGACAAGGCACGTGACCTCAACGTTCAACTTGACGCAGTTTTGCATCGACACTGTGA 1522
||||| | |||| | ||||| | |||||| || | |||||||||||| ||||||||||
Sbjct 1527 TGAGGCCGCGGCATATAACCTCGATGTTCAATTTAAGGCAGTTTTGCATTGACACTGTGA 1586
Query 1523 TGAGTATTTGGCATTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAGAATTACA 1582
||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1587 TGACAATTTGGCACTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAGAATTACA 1646
Query 1583 AAGTCATAGGCATAGATTCCTTAAGGGTAATCGATGGATCCACATTTCTGAAGTCTCCAG 1642
|||| ||||||| |||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct 1647 GAGTCTTAGGCATTGATTCCTTAAGGGTCATCGATGGATCCACATTTCTCAAGTCTCCGG 1706
Query 1643 GGACTAATCCCCAAGCCACGGTCATGATGCTTGGAAGGTA 1682
|||||||||| ||||| || || |||||||| ||||||||
Sbjct 1707 GGACTAATCCTCAAGCTACTGTTATGATGCTCGGAAGGTA 1746
> AT3G56060.1 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase
family protein | chr3:20803133-20806013 REVERSE LENGTH=1959
Length=1959
Score = 1014 bits (549), Expect = 0.0
Identities = 1328/1693 (78%), Gaps = 98/1693 (6%)
Strand=Plus/Plus
Query 30 TATTCTCGTCGCAATTTTAATCTTATC-TGGCTCTTGTTATTGCGATAAAGCCGGACATT 88
||| ||||||||| |||| ||||| | | ||| ||||||| |||| |||| ||| | |
Sbjct 63 TATCCTCGTCGCAGTTTTCATCTT-CCACGACTCGTGTTATTCCGATGAAGCTGGAAACT 121
Query 89 ATACATTTATGAATGATGCAACATTGGCACCAAAG-CATGCTCGTTTCAACGACATAACC 147
||| ||||||||| ||||||||||| ||||||||| || ||| ||| || |||||| |
Sbjct 122 ATAGATTTATGAAAGATGCAACATTAGCACCAAAGTTAT-CTCACTTCGACTACATAATC 180
Query 148 ATCGGTGGAGGAACCGCAGGTTGTGCATTAGCCGCAACACTCTCTCAAAACGCCAGCGTT 207
||||| ||||||||||| || ||||||||||||||||| |||||||||||||| | ||||
Sbjct 181 ATCGGAGGAGGAACCGCTGGATGTGCATTAGCCGCAACGCTCTCTCAAAACGCAACCGTT 240
Query 208 TTGGTTCTAGAACGCGGTGGCTCGCCC-TATGACAATCCCA-CGGCCAGTGATATTGGCA 265
| || || |||||||| || || ||| || ||| || ||| |||| | || || || |
Sbjct 241 CTAGTCCTCGAACGCGGAGGTTC-CCCTTACGACGAT-CCAGCGGCAACAGACATCGGAA 298
Query 266 ACTTCGCCAACACACTCTTTAACA-ACACACCGAACTCATGGTCGCAGCATTTCATCTCC 324
||||||| ||||||||||| |||| | || || |||||||||||||||| ||||||||||
Sbjct 299 ACTTCGCAAACACACTCTTGAACATA-ACTCCAAACTCATGGTCGCAGCTTTTCATCTCC 357
Query 325 GAGGACGGCGTTTACAACACACGGC-CACGTGTCCTCGGTGGAGGCTCGGTAATAAACGG 383
|| |||||||||| |||| ||| || | ||||| |||||||||||| | || |||||||
Sbjct 358 GAAGACGGCGTTTTCAACTCAC-GCGCTCGTGTACTCGGTGGAGGCACAGTCATAAACGC 416
Query 384 TGGATTCTACACGCGTGCGGGCGATGATTACGTGGATGAAGC-TGAGTGGGAGATG-GAG 441
||||||||| | ||||||| || |||| ||||| ||||| || ||||||| | ||
Sbjct 417 AGGATTCTACTCACGTGCGGAAGAAGATTTCGTGGCGGAAGCAGGA-TGGGAGA-GAGAC 474
Query 442 GAAGTGGAAGCTTCTTACCAGTGGGTCGAGAAGAAACTTG-TGTTCAAGCCACAAGTGAT 500
|| || ||||| ||||| ||||||||||||||||| | | | || || |||| || |
Sbjct 475 GAGGTCGAAGCGGCTTACGAGTGGGTCGAGAAGAAAGTGGTTTTTGAA-CCACCGGTTAA 533
Query 501 GGGATGGCAATCGGCG-TTCAAAGATGGGCTTTTGGAGGCTGGAGAGTTTCCGGACAATG 559
||||||||| ||| ||| ||||||||||||||| ||||| | | ||| ||||||
Sbjct 534 CAAATGGCAATCAGCGTTTC-GAGATGGGCTTTTGGAAGCTGGTGTGACTCCATACAATG 592
Query 560 GTTTCACGTACGATCATATC-TACGGGACTAAGA-TCGGTGGTACGATCTTTGACCATGC 617
||||||||||||| |||||| | |||||||| | | ||||||||||| ||||||| |
Sbjct 593 GTTTCACGTACGAACATATCGT-TGGGACTAA-ATTTGGTGGTACGATATTTGACCGGGA 650
Query 618 CGGTCATAGACATACCGCGGCCAATTTGTTAGAGTATGCTGATCCGGAGGCGATTGTTGT 677
||||||||||| || ||||| |||||||| ||||||||| ||||| | ||| |||||
Sbjct 651 TGGTCATAGACACACGGCGGCGAATTTGTTGGAGTATGCTAATCCGAACATGATAGTTGT 710
Query 678 TTACTTGCATGCTTATGTTCACAAGATCCTCTTCACCACCAAAGGTAGCCAGAAACCAAA 737
||||||||||||| ||| || |||||||||||||| | ||||||| ||||| || ||
Sbjct 711 CTACTTGCATGCTTCTGTCCATAAGATCCTCTTCACTATTAAAGGTAACCAGAGGCCCAA 770
Query 738 AGCATACGAAGTGATATTTGAGGACGCAAATGGAATGTTCC-ACAAGGCAG-A---GCTA 792
|||||| | ||||||||| ||||||||||||| || ||| ||||||||| | || |
Sbjct 771 AGCATATGGGGTGATATTTCTGGACGCAAATGGAGTG-TCCTACAAGGCAGAATTGGCAA 829
Query 793 -GCAAATA-ACG-CAATGAACGAAGTGATCTTGTCTGCTGGAGCAAT-GGGTAGCCCGCA 848
|| || | || |||||| || |||||||| || || || || || | | ||||| ||
Sbjct 830 CGC-AAGACTCGACAATGAGTGAGGTGATCTTATCAGCAGGTGCCATCGCG-AGCCCTCA 887
Query 849 ACTGTTGATGCTAAGTGGCGTAGGTCCTGCAGCCCATCTTGC-GGCTCACGGCGTGAATC 907
||| |||||||||||||| || || ||||| || |||||||| | || | | ||||| |
Sbjct 888 ACTATTGATGCTAAGTGGTGTGGGCCCTGCGGCTCATCTTGCAGCCT-ATAGAGTGAACC 946
Query 908 CACTCGTCCTAGATC-ACCCTATGGTTGGG-CATGAGATCGCTGATAATCCC-ATGAA-- 962
| || || |||||| |||| |||| |||| || | ||| | |||||| ||| |||||
Sbjct 947 CGGTCATCGTAGATCAACCC-ATGG-TGGGCCAAGGGATGGGTGATAA-CCCGATGAATC 1003
Query 963 C-GTTGTATTCATCCCTTCTCCTCAACCAGTAGAAGTGTCCCTCATACAAACTGTTGGGA 1021
| ||| | || |||||||||||| |||| ||||||||||| || ||||| | || || |
Sbjct 1004 CGGTT-T-TT-ATCCCTTCTCCTGAACCCGTAGAAGTGTCTCTTGTACAAGCCGTAGGAA 1060
Query 1022 TCACAAAGTTTGATAGTTACATTGAAGGTGGAAGTGGCTTGAGTCTCTCT-TTTGACTTG 1080
|||| ||||||| ||||||||||||||||||||||| ||| ||||||||| || | |||
Sbjct 1061 TCACCAAGTTTGGTAGTTACATTGAAGGTGGAAGTGCCTTAAGTCTCTCTATTAG-TTTG 1119
Query 1081 ACCCGTAGGTTTTTCGATGGTGTTTTGAATCTTTTTAACGAGACAAGCCGTACTACATCT 1140
|||||||| || ||||||||||||||||||||| || | | | || | || | |
Sbjct 1120 ACCCGTAGCTTCTTCGATGGTGTTTTGAATCTTCTT-A--A-A-AA---G-AC-A-A--- 1165
Query 1141 AGGAATATCCTGACCCACTCTAT-T-GAAGTCCTTTTGAAATCTTTGGATCTTGGATTGG 1198
| | | |||| ||||| || || | |||| |||| ||||||||||||||| |||
Sbjct 1166 A--ACT-TCCT-ACCCAATCCATCTCAAAGT--TTTTCAAATCTTTGGATCTTACCTTGA 1219
Query 1199 ACGT-AATGATTAATGGGGGTTTGATCGTTCAAAAAATCG-ATGGACCGGC-CTCAAAAG 1255
|||| | | | || | |||| ||||| | |||||| | | ||||||| || ||| | ||
Sbjct 1220 ACGTGACT-ACAAAAGCGGGTGTGATCATCCAAAAAGT-GAATGGACC-GCTCTCGAGAG 1276
Query 1256 GACACATGGAGCTCCGGAACACGGACCCAAG-GGATAACCCTTCAGTGACATTCAACTAC 1314
| ||| ||||| | ||||| ||| | || || |||||||||||||||||||||||||||
Sbjct 1277 GTCACTTGGAGTTGCGGAATACGAATCC-AGATGATAACCCTTCAGTGACATTCAACTAC 1335
Query 1315 TATCAAGAA-CCTGAGGATTTGAACAAGTGTGTTAAAGGGCTTAACACCGTTATTCA-GA 1372
| | ||| | || ||||||||||||||||||||| |||| |||| ||| ||||| | |
Sbjct 1336 TTT-AAGGATCCAGAGGATTTGAACAAGTGTGTTGAAGGACTTAGTACCATTATTAAAGT 1394
Query 1373 CGATAAATTCTAAAGCCTTCTCCAAGTACAAGTACCCAGGT-GTGACCGCACGTG-AGCT 1430
|||| |||| || | | |||||||||||||||||| | | || ||||||| | ||
Sbjct 1395 -GATAGATTCGAAGGGATACTCCAAGTACAAGTACCCTT-TAGCGAGTGCACGTGGA-CT 1451
Query 1431 GCTCAATCTCATG-TTGGGCCTTCCCA-TCAATCTGAGGACAAGGCACGTGACCTCAACG 1488
|| |||||||| ||| | |||||| | ||| | ||| |||| ||| | || ||||||
Sbjct 1452 ACTAAATCTCATTCTTGCTC-TTCCCACT-AATTTAAGGCCAAGACACATAACTTCAACG 1509
Query 1489 TTCAACTTG-ACGCAGTTTTGCATCGACACTGTGATGAGTATTTGGCATTACCATGGAGG 1547
|| | ||| | ||||| ||| ||||| || ||||||| ||||| ||||||||||||||
Sbjct 1510 TTTGATTTGGA-GCAGTATTGTATCGATACCGTGATGACTATTTATCATTACCATGGAGG 1568
Query 1548 TTGCCAAGTTGGAAGAGTGGTTGACAAGAATTACAAAGTCAT-AGGCATAGATTCCTTAA 1606
||| |||||||||| |||||| ||||| ||||||||||| || ||| | ||| | || |
Sbjct 1569 TTGTCAAGTTGGAAAAGTGGTCGACAACAATTACAAAGT-ATTAGGGGTTGATGCTTTGA 1627
Query 1607 GGGTAATCGATGGATCCACATTTCTGAAGTCTCCAGGGACTAATCCCCAAGCCACGGTCA 1666
|| | |||||||||||||| ||||| |||||||| ||||||||||| || ||||| |||
Sbjct 1628 GGATCATCGATGGATCCACGTTTCTCAAGTCTCCGGGGACTAATCCACAGGCCACAATCA 1687
Query 1667 TGATGCTTGGAAG 1679
||||||| |||||
Sbjct 1688 TGATGCTCGGAAG 1700
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83182303065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5