BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg917162 Length=1554 Score E Sequences producing significant alignments: (Bits) Value AT1G51150.1 | Symbols: DegP6 | DegP protease 6 | chr1:18948370-... 793 0.0 AT5G54745.1 | Symbols: | Trypsin family protein | chr5:2224025... 339 7e-92 > AT1G51150.1 | Symbols: DegP6 | DegP protease 6 | chr1:18948370-18949290 REVERSE LENGTH=660 Length=660 Score = 793 bits (429), Expect = 0.0 Identities = 538/588 (91%), Gaps = 18/588 (3%) Strand=Plus/Plus Query 1 ATGTTGTTCCGGTCTG-T--TCATATTGTGGCTAGGTTCAGCAACTCCACGAGCACTTCG 57 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || Sbjct 1 ATGTTGTTCCGGTCTGTTCATCATATTGTGGCTAGGTTCAGCAACTCCACGAGCACTCCG 60 Query 58 GTTGC-TCGATTTTTCTATTCTCCTTCCCTTCTTCGTCGTGGTTGGTCTTTTAGA-GCTT 115 || | |||||||||||||||||||||||||||||||||| ||| |||||||| | |||| Sbjct 61 ATT-CATCGATTTTTCTATTCTCCTTCCCTTCTTCGTCGTCGTTCGTCTTTTA-ATGCTT 118 Query 116 CTTTTATATCTCGTTGTTGTTCTTCTGTGTGCGTTCGGTCTGATATTGATGTGGCTCGAG 175 |||| |||||||||||||||||||| ||| | | | ||| ||||||||||||||| Sbjct 119 CTTTGATATCTCGTTGTTGTTCTTC--TGT--G---AG-C-GATGTTGATGTGGCTCGAG 169 Query 176 ACTCGGTGGTGAAGATCTTTTCCTTTTCTAGAGAGCCAAATGTTGTTCAACCTTGGCAAA 235 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 170 ACGCGGTGGTGAAGATCTTCTCCTTTTCTAGAGAGCCAAATGTTGTTCAACCTTGGCAAA 229 Query 236 CAACTGAGAAAGAATACTCAAGCTCTGGATTTGTAATATCCGGAAGGAGGATTCTTACAA 295 ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct 230 CAACTGAGAAAGAATACTCAAGCTCTGGATTTGCAATCTCCGGGAGGAGGATTCTTACAA 289 Query 296 ACTCTCATGTTGCGGGTGATCACCCATACGTGCAAGTGAGAAAGCATGGTTCATCCACTA 355 || ||||||||| |||||||||| |||| ||||||||||||| ||||||||| |||||| Sbjct 290 ACGCTCATGTTGTGGGTGATCACTTATACCTGCAAGTGAGAAAACATGGTTCACCCACTA 349 Query 356 AGTACAAAGCAGAAGTTAAAGCGCAT-GGATATGGATGTGACTTAGCTATTTTAAGCATT 414 | |||||||| |||||||||||| | || |||||||||||||||||||| ||| | ||| Sbjct 350 AATACAAAGCTGAAGTTAAAGCGTTTAGG-TATGGATGTGACTTAGCTATCTTAGGTATT 408 Query 415 AATAGTGAAGAGTTTTGGGAGGATATGAATCCTTTGGAGCTCGGAGACATACCTTTTATT 474 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 409 GATAGTGAAGAGTTTTGGGAGGATATAAATCCTTTGGAGCTCGGAGGCATACCTTTTATC 468 Query 475 GGTGAAACTGTCTACGCTTTAGGTTATCCTCGTGGTGGTGATAGCATATCGGTCACAAAA 534 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 469 GGTGAAACTGTCTACGCTTTAGGTTATCCTCGTGGTGGTGATACCATATCGGTCACAAAA 528 Query 535 GGTATTGTAACGAGAGTTGAACCTCAAACGTATTCTCACAGCTCCATT 582 |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 529 GGTATTGTAACGAGAGTTGAACCTCAAAAGTATTCTCACAGCTCCATT 576 > AT5G54745.1 | Symbols: | Trypsin family protein | chr5:22240256-22241233 REVERSE LENGTH=597 Length=597 Score = 339 bits (183), Expect = 7e-92 Identities = 216/232 (93%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 157 GATATTGATGTGGCTCGAGACTCGGTGGTGAAGATCTTTTCCTTTTCTAGAGAGCCAAAT 216 ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||| Sbjct 112 GATATTGATCTGGCTCAAGACTCGGTGGTGAAGATCTTCTCCTTTTCAAGAGAGCCAAAT 171 Query 217 GTTGTTCAACCTTGGCAAACAACTGAGAAAGAATACTCAAGCTCTGGATTTGTAATATCC 276 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 172 GTTGTTCAACCTTGGCAAACAACTGAGAAAGAATACTCAAGCTCTGGATTTGCAATCTCC 231 Query 277 GGAAGGAGGATTCTTACAAACTCTCATGTTGCGGGTGATCACCCATACGTGCAAGTGAGA 336 || |||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||| Sbjct 232 GGGAGGAGGATTCTTACAAACGCTCATGTTGTGGGTGATCACTCATACCTGCAAGTGAGA 291 Query 337 AAGCATGGTTCATCCACTAAGTACAAAGCAGAAGTTAAAGCGCATGG-ATAT 387 || ||||||||| ||||||||||||||||||||||||||||| ||| |||| Sbjct 292 AAACATGGTTCACCCACTAAGTACAAAGCAGAAGTTAAAGCGTTTGGGATAT 343 Score = 339 bits (183), Expect = 7e-92 Identities = 219/236 (93%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 447 TTTGGAGCTCGGAGACATACCTTTTATTGGTGAAACTGTCTACGCTTTAGGTTATCCTCG 506 ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| Sbjct 343 TTTGGAGCTCGGAGATATACC-TTTATTGGTGAAACTATCTACGCTTTAGGTTATCCTCG 401 Query 507 TGGTGGTGATAGCATATCGGTCACAAAAGGTATTGTAACGAGAGTTGAACCTCAAACGTA 566 || |||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 402 TGATGGTGATATCATATCTGTCACAAAAGGTATTGTAACGAGAGTTGAACCTCAAAAGTA 461 Query 567 TTCTCACAGCTCCATTGGAATATTAACGATACAAACAGATGCG-GCTATTAACGATGGAA 625 | ||||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||| Sbjct 462 TGCTCACAGCTCCATTGAAATATTAACGATACAAACAGATGCGTG-TATTAACGGTGGAA 520 Query 626 ATAATGGTGGTCCGGTGGTCATGGACAACAAAGTTGCTGGTGTGGTATATGAAAAT 681 | | ||||||||| |||||||||| ||||||||||||||||||||||| ||||||| Sbjct 521 AGAGTGGTGGTCCAGTGGTCATGGGCAACAAAGTTGCTGGTGTGGTATTTGAAAAT 576 Score = 69.4 bits (37), Expect = 1e-10 Identities = 37/37 (100%), Gaps = 0/37 (0%) Strand=Plus/Plus Query 18 TCATATTGTGGCTAGGTTCAGCAACTCCACGAGCACT 54 ||||||||||||||||||||||||||||||||||||| Sbjct 71 TCATATTGTGGCTAGGTTCAGCAACTCCACGAGCACT 107 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76706432760 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5