BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg917212 Length=342 Score E Sequences producing significant alignments: (Bits) Value AT5G55170.1 | Symbols: SUM3, SUMO 3, SUMO3, ATSUMO3 | small ubi... 464 2e-130 > AT5G55170.1 | Symbols: SUM3, SUMO 3, SUMO3, ATSUMO3 | small ubiquitin-like modifier 3 | chr5:22385307-22386114 REVERSE LENGTH=540 Length=540 Score = 464 bits (251), Expect = 2e-130 Identities = 311/339 (92%), Gaps = 8/339 (2%) Strand=Plus/Plus Query 1 ATGTCTAACTCTCAAGAAGATGACAAGAATCCCATCGACCAAGAACAAGAAGCTCATGTC 60 ||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 44 ATGTCTAACCCTC---AAGATGACAAG---CCCATCGACCAAGAACAAGAAGCTCATGTC 97 Query 61 ATCCTCAAGGTCAAGAGCCAGGATGGAGATGAAGTCTTATTTAAGATCAAGAAAAGCACT 120 || |||||||||||||||||||||||||| |||||||||||||||| ||| |||||| || Sbjct 98 ATTCTCAAGGTCAAGAGCCAGGATGGAGACGAAGTCTTATTTAAGAACAAAAAAAGCGCT 157 Query 121 CCGCTTAGAAAGCTCATGTACGCTTACTGCGACCGCCGAGGTTTGAAATTAGACGCATTC 180 || |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 158 CCACTTAAAAAGCTCATGTATGTTTACTGCGACCGCCGAGGTTTGAAATTAGACGCATTC 217 Query 181 GCTTTCATTTTTGATGGAGCTCGTATCCATGGCAC-GCAGACTCCAGATGAGCTTGATAT 239 |||||||||||| ||||||||||||| |||| | | |||||||||||||||||||||| Sbjct 218 GCTTTCATTTTTAATGGAGCTCGTATAGGTGGC-CTGGAGACTCCAGATGAGCTTGATAT 276 Query 240 GGAAGATGGAGATGAGATCGATGCGTGCCGGGCGATGAGTGGTGGTCTACGAGCAAATCA 299 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 277 GGAAGATGGAGATGTGATAGATGCGTGCCGGGCGATGAGTGGTGGTCTACGAGCAAATCA 336 Query 300 GCTTCAGTGGTCTTATATGGTTTTCGATCATAATCGGCT 338 || |||||||||||||||| |||||||||||||| |||| Sbjct 337 GCGTCAGTGGTCTTATATGCTTTTCGATCATAATGGGCT 375 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15985144182 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5