BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg917292
Length=3273
Score E
Sequences producing significant alignments: (Bits) Value
AT5G56040.2 | Symbols: | Leucine-rich receptor-like protein ki... 5131 0.0
AT4G26540.1 | Symbols: | Leucine-rich repeat receptor-like pro... 2078 0.0
AT4G26542.1 | Symbols: | Potential natural antisense gene, loc... 1618 0.0
> AT5G56040.2 | Symbols: | Leucine-rich receptor-like protein
kinase family protein | chr5:22694878-22698628 FORWARD LENGTH=3663
Length=3663
Score = 5131 bits (2778), Expect = 0.0
Identities = 3116/3281 (95%), Gaps = 16/3281 (0%)
Strand=Plus/Plus
Query 1 ATGCCACGTAACCCTAGATTCTGCTTCTTCCTCTTCCTTCTCTTTCACTCCTCTGTTTTC 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 173 ATGCCACGTAACCCTAGATTCTGCTTCTTCCTCTTCCTTCTTTTTCACTCCTCTCTTTTC 232
Query 61 TTCAT-CACCCCCTGTTTCTCCATAGACGAACAAGGTCTAGCTCTCCTCTCATGGAAATC 119
||| | || ||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 233 TTC-TCCATCCCCTGTTTTTCCATAGACGAACAGGGTCTAGCTCTCCTCTCATGGAAATC 291
Query 120 TCAGTTAAACATCTCCGGAGACGCTTTATCTTCTTGGAAAGCCTCCGAATCGAATCCTTG 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 TCAGTTGAACATCTCCGGAGACGCTTTATCTTCTTGGAAAGCCTCCGAATCGAATCCTTG 351
Query 180 TCAATGGGTCGGAATCAGATGCAACGAAAGAGGTCAAGTCTCGGAGATACAACTCCAAGT 239
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 TCAATGGGTGGGAATCAAATGCAACGAAAGAGGTCAAGTCTCGGAGATACAACTCCAAGT 411
Query 240 CATGGATTTTCAAGGTCCGTTACCGGCGACGAATCTCCGGCAGTTAAAGTCTCTGACTTT 299
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 412 CATGGATTTTCAAGGTCCGTTACCGGCGACGAATCTCCGACAGATAAAGTCTCTGACTTT 471
Query 300 ACTCAGTTTAACCTCCGTGAATCTCACCGGTTCAATTCCTAAAGAGCTTGGAGACTTGTC 359
||||| |||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct 472 GCTCAGCTTAACCTCCGTGAATCTCACTGGTTCAATCCCTAAGGAGCTTGGAGACTTGTC 531
Query 360 GGAGCTAGAAGTTCTTGATTTAGCTGATAATTCTCTCTCTGGTGAAATCCCAGTGGAAAT 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 532 GGAGCTAGAAGTTCTTGATTTAGCTGATAATTCTCTCTCTGGTGAAATCCCTGTGGATAT 591
Query 420 CTTCAAGCTCAAGAAACTCAAGACTCTGTCTCTCAACACAAACAATCTCGAAGGTGTGAT 479
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct 592 CTTCAAGCTCAAGAAACTAAAGATTCTGTCTCTCAACACAAATAATCTCGAAGGTGTGAT 651
Query 480 TCCATCGGAGTTAGGGAATCTCGTGAACCTCGTCGAGCTCACTCTCTTCGACAATAAACT 539
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 652 TCCATCGGAGTTAGGGAATCTCGTTAACCTCATCGAGCTCACTCTCTTCGACAATAAACT 711
Query 540 CGCCGGAGAGATTCCTAGAACCATCGGAGAACTCAAGAATCTAGAAATCTTCCGTGCAGG 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 CGCCGGAGAGATTCCTAGAACCATCGGAGAACTCAAGAATCTAGAAATCTTCCGTGCAGG 771
Query 600 TGGGAACAAGAATCTCAGAGGAGAGCTTCCTTGGGAGATTGGTAACTGCGAGAGTCTTGT 659
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 TGGTAACAAGAATCTCAGAGGAGAGCTTCCTTGGGAGATTGGTAACTGCGAGAGTCTTGT 831
Query 660 GACTTTAGGTCTCGCCGAAACAAGTCTCTCCGGTAAACTTCCGGAGTCGATCGGAGACCT 719
||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||
Sbjct 832 GACTTTAGGTCTCGCCGAAACAAGTCTCTCCGGTAGACTTCCGGCGTCGATCGGAAACCT 891
Query 720 GAAAAAAGTTCAGACAATAGCCCTGTACACGTCACTCTTGTCTGGTCCAATCCCTGATGA 779
|||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 892 GAAAAAGGTTCAGACAATAGCTCTTTACACGTCACTCTTGTCTGGTCCAATCCCTGATGA 951
Query 780 GATTGGAAACTGCACAGAGCTTCAAAACCTCTACTTGTACCAAAACTCAATCTCTGGATC 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 GATTGGAAACTGCACAGAGCTTCAAAACCTCTACTTGTACCAAAACTCAATCTCTGGATC 1011
Query 840 GATTCCT-TCATCACTGGGACGTCTCAAGAAGCTTCAAAGTCTTCTCTTATGGCAAAACA 898
||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 GATTCCTGT-ATCAATGGGACGTCTCAAGAAGCTTCAAAGTCTTCTCTTATGGCAAAACA 1070
Query 899 ATCTCGTCGGAAAAATACCC-ACCGAGCTAGGCACCTGTCCGGAGCTTTTCCTCGTCGAT 957
||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1071 ATCTCGTCGGAAAGAT-CCCTACCGAGCTAGGCACCTGTCCGGAGCTTTTCCTCGTCGAT 1129
Query 958 TTATCTGAAAATCTTCTCACCGGAAACATCCCAAGAAGCTTCGGAAACCTTCCAAATCTC 1017
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1130 TTATCGGAAAATCTCCTCACCGGAAACATCCCAAGAAGCTTCGGAAACCTTCCAAATCTC 1189
Query 1018 CAAGAACTTCAGCTCAGCGTTAACCAACTCTCCGGTACAATCCCTGAAGAGCTCGCGAAC 1077
||||| |||||||| || |||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1190 CAAGAGCTTCAGCTAAGTGTTAACCAGCTCTCCGGTACAATCCCTGAAGAACTCGCGAAT 1249
Query 1078 TGCACGAAGCTAACACATTTAGAGATCGATAACAACCAAATCTCCGGCGAGATTCCACCG 1137
||||||||| | || ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1250 TGCACGAAGTTGACGCATTTAGAGATCGATAACAACCAAATCTCCGGCGAGATTCCGCCG 1309
Query 1138 TTGATCGGAAAATTAACAAGCTTGACGATGTTCTTCGCGTGGCAGAATCAGTTAACCGGA 1197
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1310 TTGATCGGGAAATTAACAAGCTTGACGATGTTCTTTGCGTGGCAGAATCAGTTAACCGGA 1369
Query 1198 AAAATTCCAGAATCTCTTTCTCAATGCCAAGAGCTTCAAGCGATCGATCTCTCTTACAAT 1257
| ||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct 1370 ATAATTCCAGAGTCTCTTTCTCAATGTCAAGAGCTTCAAGCGATTGATCTCTCCTACAAC 1429
Query 1258 AATCTCTCTGGTTCGATACCTAATGGAATCTTCGAAATACGAAACCTCACGAAGCTTCTT 1317
|||||||||||||||||||||||||||||||| || || |||||||||||||||||||||
Sbjct 1430 AATCTCTCTGGTTCGATACCTAATGGAATCTTTGAGATTCGAAACCTCACGAAGCTTCTT 1489
Query 1318 CTTCTCTCTAACTACTTATCTGGATTCATACCACCGGATATTGGAAACTGCACGAATCTC 1377
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1490 CTTCTCTCTAACTACTTATCTGGATTCATACCACCGGATATTGGAAACTGCACGAATCTT 1549
Query 1378 TACAGGTTAAGACTCAACGGAAACAGACTTGCGGGGAATATTCCGGCGGAGATTGGGAAT 1437
||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1550 TACCGGTTAAGACTCAACGGTAACAGACTCGCGGGGAATATTCCGGCGGAGATTGGGAAT 1609
Query 1438 CTGAAAAA-CATCAACTTTATCGATATAAGTGATAATCGTCTCATCGGAAACATTCCTCC 1496
|||||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1610 CTGAAAAATC-TCAACTTCATCGATATAAGTGAGAATCGTCTCATCGGAAACATTCCTCC 1668
Query 1497 GGCGATCTCCGGTTGTACAAGTCTCGAATTCGTCGATCTACATTCAAACGGTTTAACCGG 1556
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1669 GGAGATCTCCGGTTGTACAAGTCTCGAATTCGTCGATCTACATTCAAACGGTTTAACCGG 1728
Query 1557 TGGTTTACCCGGTACACTTCCGAGGAGCTTACAATTCATCGATTTATCCGATAATTCATT 1616
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 1729 TGGTTTACCCGGTACACTTCCGAAGAGCTTACAATTCATTGATTTATCCGATAATTCATT 1788
Query 1617 AACCGGTCCTCTACCAACCGGAATCGGATCGTTAACCGAACTAACGAAGCTCAATCTCGC 1676
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1789 AACCGGTTCTCTACCAACCGGAATCGGATCGTTAACCGAACTCACGAAGCTCAATCTCGC 1848
Query 1677 TAAGAACCGATTCTCCGGCGAAATCCCAAGAGAGATCTCGTCTTGTCGGAGTCTTCAGCT 1736
||||| || ||||||||||||||||| ||||||| || || |||||||||||||||||
Sbjct 1849 GAAGAATCGTTTCTCCGGCGAAATCCCTCGAGAGATATCTTCCTGTCGGAGTCTTCAGCT 1908
Query 1737 TCTCAACCTTGGCGACAATAGCTTCACCGGAGAAATCCCAAACGACCTAGGACGAATCCC 1796
||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||
Sbjct 1909 TCTCAACCTCGGCGACAATGGCTTCACCGGAGAAATCCCTAACGAGTTAGGACGGATCCC 1968
Query 1797 GTCTCTTGCCATAGCTCTGAATCTCAGCTGCAATAACTTCGCCGGAGAAATCCCGACGAG 1856
||||||||| || |||| ||||||||||||||| ||||| ||||||| |||||| ||||
Sbjct 1969 GTCTCTTGCGATCTCTCTAAATCTCAGCTGCAATCACTTCACCGGAGAGATCCCGTCGAG 2028
Query 1857 ATTCTCGAGCCTCACTAATCTCGGAACCCTCGATATCTCTCACAACAAACTCGCCGGAAA 1916
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2029 ATTCTCTAGCCTCACTAATCTCGGAACCCTCGATGTCTCTCACAACAAACTCGCCGGAAA 2088
Query 1917 CTTAAACGTCTTAGCTGATCTACAGAACCTCGTCTCACTCAACATCTCATTCAACGAATT 1976
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2089 CCTAAACGTCTTAGCTGATCTACAGAACCTCGTCTCACTCAACATCTCCTTCAACGAATT 2148
Query 1977 CTCCGGCGAGTTACCAAACACTCTGTTTTTCAGGAAACTGCCACTCTCTGTTCTTGAATC 2036
||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 2149 CTCAGGCGAGTTACCAAATACTCTGTTTTTCAGGAAACTTCCACTCTCTGTTCTTGAATC 2208
Query 2037 AAACAAAGGGCTTTTTATCTCGACCCGACCCGAGAATGGGATCCAAACCCGACACCGCTC 2096
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 2209 AAACAAAGGGCTATTTATTTCGACCCGACCCGAGAATGGGATCCAAACCCGACACCGTTC 2268
Query 2097 CGCCGTGAAACTAACCATGTCGATCCTCGTCGCAGCAAGCGTCGTTCTTGTTCTCATGGC 2156
|| || ||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2269 GGCTGTCAAAGTAACCATGTCGATCCTCGTAGCAGCAAGCGTCGTTCTTGTTCTCATGGC 2328
Query 2157 GATTTACACTCTCGTCAAAGCACA--GAAAGTCGCCGGAAAACATGAGGAACTAGATTCT 2214
| ||||||||||||||||||| || ||| || |||||||||| ||||| ||||||||
Sbjct 2329 GGTTTACACTCTCGTCAAAGCTCAACGAA--TCACCGGAAAACAAGAGGAGTTAGATTCT 2386
Query 2215 TGGGAAGTGACTCTTTATCAAAAACTCGATTTCTCAATCGACGACATCGTCAAGAATCT- 2273
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct 2387 TGGGAAGTGACTCTTTATCAGAAACTCGATTTCTCCATCGACGACATCGTCAAGAA-CTT 2445
Query 2274 AACTTCAGCTAACGTGATCGGAACTGGAAGCTCCGGTGTAGTTTACAGAGTCACAATCCC 2333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2446 AACTTCAGCTAACGTGATCGGAACTGGAAGCTCCGGTGTAGTTTACAGAGTCACAATCCC 2505
Query 2334 GTCCGGTGAAACTTTAGCCGTGAAGAAAATGTGGTCAAAGGAAGAAAACGGAGCGTTTAA 2393
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct 2506 GTCCGGTGAAACTTTAGCTGTGAAGAAAATGTGGTCAAAGGAAGAAAACAGAGCGTTTAA 2565
Query 2394 CTCAGAGATCAACACTCTTGGATCTATTCGACATCGGAACATAATCCGTCTCTTGGGTTG 2453
|||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||
Sbjct 2566 CTCAGAGATCAACACTCTTGGATCGATTCGACATAGGAACATAATCCGTCTTTTGGGTTG 2625
Query 2454 GTGTTCGAATCGGAATCTGAAGCTTTTGTTCTATGATTATCTTCCTAACGGAAGTTTAAG 2513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2626 GTGTTCGAATCGGAATCTGAAGCTTTTGTTCTATGATTATCTTCCTAACGGAAGTTTAAG 2685
Query 2514 CTCTCTGCTTCATGGTGCCGGTAAAGGAAGTGGAGGAGCTGATTGGCAAGCACGTTACGA 2573
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2686 CTCTCTGCTTCACGGTGCCGGTAAAGGAAGTGGAGGAGCTGATTGGGAAGCACGTTACGA 2745
Query 2574 CGTCGTTTTAGGCGTTGCACATGCTCTTGCTTATCTTCATCATGATTGT-TTACCTCCGA 2632
|||||||||||||||||||||||| || ||||||||||||||||||||| || |||||||
Sbjct 2746 CGTCGTTTTAGGCGTTGCACATGCACTAGCTTATCTTCATCATGATTGTCTT-CCTCCGA 2804
Query 2633 TTCTACACGGTGACGTTAAAGCTATGAATGTCTTATTGGGTTCCCGGTTCGAATCTTACT 2692
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2805 TTCTACACGGTGACGTTAAAGCTATGAATGTCTTATTGGGTTCCCGCTTCGAATCTTACT 2864
Query 2693 TAGCCGATTTCGGTTTAGCGAAAATCGTATCCGGTGAGGGAGTTATCGATGGAGATTCGT 2752
||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||
Sbjct 2865 TAGCCGATTTCGGTTTAGCAAAAATCGTCTCCGGTGAGGGAGTTACCGATGGAGATTCGT 2924
Query 2753 CGAAATTGAGTAACCGGCCTCCGTTAGCCGGTTCTTACGGCTATATGGCTCCAGAACATG 2812
| ||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct 2925 CTAAATTGAGTAACCGGCCTCCGTTAGCCGGTTCTTATGGTTACATGGCTCCAGAACATG 2984
Query 2813 CTTCAATGCAACATATAACCGAAAAGAGTGATGTGTATAGCTATGGAGTGGTGCTACTAG 2872
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2985 CTTCGATGCAACATATAACAGAAAAGAGTGATGTGTATAGCTATGGAGTGGTGCTACTAG 3044
Query 2873 AAGTTTTAACCGGGAAGCATCCATTGGATCCGGATCTACCCGGTGGTGCTCATTTGGTTC 2932
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 3045 AAGTTTTAACCGGGAAGCATCCATTGGACCCGGATCTACCCGGAGGTGCTCATTTGGTTC 3104
Query 2933 AATGGGTGAGAGATCATTTAGCCGGAAAGAAAGATCCTAGAGAAATTCTTGACCCGAGAC 2992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3105 AATGGGTGAGAGATCATTTAGCCGGAAAGAAAGATCCTAGAGAAATTCTTGACCCGAGAC 3164
Query 2993 TCCGCGGACGGGCAGATCCCATAATGCATGAGATGCTACAAACTCTAGCAGTCGCGTTCC 3052
||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||
Sbjct 3165 TCCGCGGGCGGGCAGATCCTATAATGCATGAGATGCTACAAACTCTAGCGGTCTCGTTCC 3224
Query 3053 TTTGCGTGAGCAACAAGGCAGCTGATAGGCCTATGATGAAAGACATTGTGGCGATGCTTA 3112
|||| ||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||
Sbjct 3225 TTTGTGTGAGCAACAAGGCATCCGATCGGCCTATGATGAAAGACATTGTGGCAATGCTTA 3284
Query 3113 AAGAGATTAGACAGTTTGATATCGAGCGATCGGAAACCGATATGATTAAAGGGGGAAAAT 3172
|||||||||| ||||||||||| || |||||||| |||||||||| ||||| |||||||
Sbjct 3285 AAGAGATTAGGCAGTTTGATATGGATAGATCGGAATCCGATATGATAAAAGGCGGAAAAT 3344
Query 3173 GCGAAAAATGGCAGCCGCAACCGTTACCACCGGAGAAAATTGTCAATACTCCTCGAGGTT 3232
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3345 GCGAAAAATGGCAGCCGCAACCGTTACCACCGGAGAAAATTGTCAGTACTCCTCGAGGTT 3404
Query 3233 CATCTAATTGTTCGTTTGCTTTCTCGGATGAATCCGTATAA 3273
||||||||||||||||||||| |||||||||||||||||||
Sbjct 3405 CATCTAATTGTTCGTTTGCTTACTCGGATGAATCCGTATAA 3445
> AT4G26540.1 | Symbols: | Leucine-rich repeat receptor-like protein
kinase family protein | chr4:13394522-13398112 REVERSE
LENGTH=3511
Length=3511
Score = 2078 bits (1125), Expect = 0.0
Identities = 2625/3333 (79%), Gaps = 168/3333 (5%)
Strand=Plus/Plus
Query 31 CTCTTCCTTC-TCT-TTCACTCCTCTGTTTTCTTCATCACCCCCTGTTTCTC-CATAGAC 87
||| |||||| ||| || || ||||| ||||||| ||| |||||||||||| | | |||
Sbjct 106 CTC-TCCTTCTTCTCATCCCTACTCTG-TTTCTTCTTCATCCCCTGTTTCTCTC-TCGAC 162
Query 88 GAACAAGGTCTAGCTCTCCTCTCATGGAAATCTCAGTTAAACATCTCCGGAGACGCTTTA 147
||||||||| ||||||| | |||||||| ||||| | ||||||||||| ||||||||
Sbjct 163 CAACAAGGTCAAGCTCTCTTGTCATGGAAGTCTCAACTGAACATCTCCGGCGACGCTTTT 222
Query 148 TCTTCTTGGAAAGCCTCCGA-ATCGA-ATCCTTGTCAA-TGGGTCGGAATCAGATGCAA- 203
|| || ||| | | | |||| | | | ||| || ||| |||||||| | | ||| ||
Sbjct 223 TCCTCCTGGCACGTCGCCGACA-C-ATCTCCCTG-CAATTGGGTCGGCGTAAAATGTAAC 279
Query 204 CGAAAGAGGTCAAGTCTCGGAGATACAACTCCAA-GTCATGGATTTTCAAGGTCCGT-TA 261
|| |||||| |||| ||||||||||| ||| || || ||||| || |||||| | | |
Sbjct 280 CG-TAGAGGTGAAGTTTCGGAGATACAGCTCAAAGGT-ATGGACTTGCAAGGTTC-TCTG 336
Query 262 CCGGCGACGAATCTCCGGCAG-TTAAAGTCTCTGACTTTACTCAGTTTAACCTC-CGTGA 319
|||| ||| | ||||||| || | |||||||| |||| |||| |||| | || | |||
Sbjct 337 CCGGTGACTAGTCTCCGG-AGCCTCAAGTCTCTTACTTCCCTCACTTTATCTTCAC-TGA 394
Query 320 ATCTCACCGG-TTCAATTCCTAAAGAGCTTGGAGACTTGTCGGAGCTAGAAGTT-CTTGA 377
|||||||||| | ||| || || ||| | |||||||| ||||||| | |||| || ||
Sbjct 395 ATCTCACCGGAGT-AATCCCCAAGGAGATCGGAGACTTCACGGAGCTTG-AGTTACTCGA 452
Query 378 TTTAG-CTGATAATTCTCTCTCTGGTGAAATCCCAGTGGAAATCTTCAAGCTCAAGAAAC 436
||| | | |||||||||||||| ||||| ||||| ||||||||||||| |||||||||||
Sbjct 453 TTT-GTCGGATAATTCTCTCTCCGGTGATATCCCTGTGGAAATCTTCAGGCTCAAGAAAC 511
Query 437 TCAAGACTCTGTCTCTCAACACAAACAATCTCGAAGGT-GTGATTCC-ATCGGAG-TTAG 493
|||||||||||||||| ||||| |||||||| |||||| | ||||| || |||| || |
Sbjct 512 TCAAGACTCTGTCTCTGAACACTAACAATCTAGAAGGTCAT-ATTCCGAT-GGAGATT-G 568
Query 494 GGAATC--TCGTGAACCTCGTCGAGCTCACT-CTCTTCGACAATAAACTCGCCGGAGAGA 550
|||||| ||| | ||||| ||||| | | || |||||||| || || |||||||||
Sbjct 569 GGAATCTTTCG-G-GTCTCGTAGAGCTTA-TGCTTTTCGACAACAAGCTATCCGGAGAGA 625
Query 551 TTCCTAGAACCATCGGAGAACTCAAGAATCTAGAAATCTTCCGTGCAGGTGGGAACAAGA 610
| || || | |||||||| |||||||||||| || |||| ||||| |||||||||||||
Sbjct 626 TCCCAAGGAGTATCGGAGAGCTCAAGAATCTACAAGTCTTACGTGCTGGTGGGAACAAGA 685
Query 611 ATCTCAGAGGAGAGCTTCCTTGGGAGATTGGTAACTGCGAGAGTCTTGTGACT--TTAGG 668
|||| ||||| ||||||||||||||||| ||||||||||||| |||||| | | || ||
Sbjct 686 ATCTAAGAGGTGAGCTTCCTTGGGAGATAGGTAACTGCGAGAATCTTGT-AATGCTT-GG 743
Query 669 TCTCGCCGAAACAAGTCTCTCCGGTAAACTTCCGGAGTCGATCGGAGACCTGAAAAAAGT 728
|||||| || || ||||||||||| |||||||||| |||||| ||| |||||||| ||
Sbjct 744 TCTCGCTGAGACTAGTCTCTCCGGGAAACTTCCGGCGTCGATTGGAAACCTGAAACGTGT 803
Query 729 TCAGACAATAGCCCTGTACACGTCACTCTTGTCTGGTCCAATCCCTGATGAGATTGGAAA 788
|||||||||||| | |||||||||||||||||||||||||| || |||||||||||| |
Sbjct 804 TCAGACAATAGCAATTTACACGTCACTCTTGTCTGGTCCAATTCCGGATGAGATTGGATA 863
Query 789 CTGCACAGAGCTTCAAAACCTCTACTTGTACCAAAACTCAATCTCTGGATCGATTCCT-T 847
|||||||||||| ||||||||||||||||| || || |||||||| |||||||| |||
Sbjct 864 CTGCACAGAGCTCCAAAACCTCTACTTGTATCAGAATTCAATCTCAGGATCGATCCCTAC 923
Query 848 CATCACTGGGACGTCTCAAGAAGCTTCAAAGTCTTCTCTTATGGCAAAACAATCTCGTCG 907
|| || | ||| || | |||||||| || ||||| || |||||||| ||||||||||| |
Sbjct 924 CACCA-TTGGAGGTTTAAAGAAGCTGCAGAGTCTACTTTTATGGCAGAACAATCTCGTTG 982
Query 908 GAAAAATACCC-ACCGAGCTAGGCACCTGTCCGGAGCTTTTCCTCGTCGATTTATCTGAA 966
| ||||| ||| |||||||| || | |||||| ||||| | || ||||||| || ||
Sbjct 983 GGAAAAT-CCCAACCGAGCTTGGGAACTGTCCCGAGCTCTGGCTTATCGATTTTTCCGAG 1041
Query 967 AATCTTCTCACCGGAAACATCCCAAGAAGCTTCGGAAACCTTCCA-AATCTCCAAGAACT 1025
||||| |||||||| | ||||||||| ||||||||||| ||| | ||||| ||||| ||
Sbjct 1042 AATCTCCTCACCGGGACCATCCCAAGGAGCTTCGGAAAACTT-GAGAATCTACAAGAGCT 1100
Query 1026 TCAGCTCAGCGTTAACCA-ACTCTCCGGTACAATCCCTGAAGAGCTCGCGAACTGCACGA 1084
|||||| || || ||||| | |||| || ||||||||||||||||| |||| |||||||
Sbjct 1101 TCAGCTGAGTGTAAACCAGA-TCTCAGGAACAATCCCTGAAGAGCTAACGAATTGCACGA 1159
Query 1085 AGCTAACACATTTAGAGATCGATAACAACCAAATCTCCGGCGAGATTCCACCGTTGATCG 1144
|||| || |||||||||||||| || || | ||| | || |||||||| | ||||| |
Sbjct 1160 AGCTGACGCATTTAGAGATCGACAATAATCTCATCACAGGAGAGATTCCGTCATTGAT-G 1218
Query 1145 -GAAAATTAACAAGCTTGACGATGTTCTTCGCGTGGCAGAATC-AGTTAACCGGAAAAAT 1202
| || ||| |||||| || ||||||||||| |||||||| | ||||||| ||||| ||
Sbjct 1219 AGTAACCTAAGAAGCTTAACCATGTTCTTCGCATGGCAGAA-CAAGTTAACTGGAAACAT 1277
Query 1203 TCCAGAATCTCTTTCTCAATGCCAAGAGCTTCAAGCGATCGATCTCTCTTACAATAATCT 1262
|| || ||| || || || | ||||||||||| ||||||||||||||||| | |||
Sbjct 1278 CCCTCAAAGTCTCTCCCAGTGTCGTGAGCTTCAAGCCATCGATCTCTCTTACAACAGTCT 1337
Query 1263 CTCTGGTTCGATACCTAATGGA-ATCTTCGAAATACGAAACCTCACGAAGCTTCTTCTTC 1321
|||||| || || || || || || |||| |||||||||||||||||||||||||||
Sbjct 1338 CTCTGGCTCCAT-CCCAAAAGAGATATTCGGGTTACGAAACCTCACGAAGCTTCTTCTTC 1396
Query 1322 TCTCTAACT-ACTTATCTGGATTCATACCACCGGATATTGGAAACTGCACGAATCTCTAC 1380
|||| || | | || || || |||||||| ||||||||||||||||| |||||||| |||
Sbjct 1397 TCTCCAA-TGATTTGTCGGGTTTCATACCTCCGGATATTGGAAACTGTACGAATCTTTAC 1455
Query 1381 AGGTTAAGACTCAACGGAAACAGACTTGCGGGGAA-TATTCCGGCGGAGATTGGGAATCT 1439
|||||||||||||||| |||||||| || || || ||| ||| |||| || ||||||||
Sbjct 1456 CGGTTAAGACTCAACGGTAACAGACTCGCCGG-AAGTATCCCGTCGGAAATCGGGAATCT 1514
Query 1440 GAAAAA-CATCAACTTTATCGATATAAGTGATAATCGTCTCATCGGAAACATTCC-TCCG 1497
|||||| | |||||||| | ||||||||||| || |||||| |||| || ||| ||||
Sbjct 1515 GAAAAATC-TCAACTTTGTTGATATAAGTGAGAACCGTCTCGTCGGGT-CAATCCCTCCG 1572
Query 1498 GCGATCTCCGGTTGT-ACAAGTCTCGAATT-CGTCGATCTACATTCAAACGGTTTAACCG 1555
|||||||| |||||| | ||| ||||| || | ||||||| || | || || | |||
Sbjct 1573 GCGATCTCTGGTTGTGA-AAGCCTCGAGTTTC-TCGATCTTCACACGAATAGTCTCTCCG 1630
Query 1556 GTGGTTTACCCGGTAC-ACT-TCCGAG-GAGCTTACAA-TTCATCGATTTATCCGATAAT 1611
|| || | |||||| || ||| | |||||| || ||||||||||| |||||||||
Sbjct 1631 GTTCATTGCTCGGTACTACACTCCCAAAGAGCTTG-AAGTTCATCGATTTCTCCGATAAT 1689
Query 1612 TCAT-TAACCGGTCCTCTACCAACCGG-AATCGGATCGTTAACCGAACTAACGAAGCTCA 1669
| | | || || |||| || |||| ||| |||| ||| || || || || |||||||
Sbjct 1690 GC-TCTGTCCAGTACTCTGCCT-CCGGGAATAGGATTGTTGACAGAGCTTACAAAGCTCA 1747
Query 1670 ATCTCGCTAAGAACCGATTCTCCGGCGAAATCCCAAGAGAGATCTCGTCTTGTCGGAGTC 1729
||||||| |||||| |||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct 1748 ATCTCGCCAAGAACAGATTATCCGGCGAAATCCCTAGAGAAATCTCCACTTGTCGGAGTC 1807
Query 1730 TTCAGCTTCTCAACCTTGGCGACAAT-AGCTTCACCGGAGAAATCCCAAACGACCTAGGA 1788
| ||||||||||| || ||||| ||| | ||| | || |||||||| |||| | ||
Sbjct 1808 TACAGCTTCTCAATCTCGGCGAAAATGA-CTTTTCTGGTGAAATCCCTGACGAATTGGGT 1866
Query 1789 CGAATCCCGTCTCTTGCCATAGCTCTGAATCTCAGCTGCAATAACTTCGCCGGAGAAATC 1848
| |||||||||||| || ||| |||| |||||||||||||||| |||| ||||||||||
Sbjct 1867 CAAATCCCGTCTCTGGCGATATCTCTTAATCTCAGCTGCAATAGGTTCGTCGGAGAAATC 1926
Query 1849 CCGACGAGATTCTC-GAGCCTCACTAATCTCGGAACCCTCGATATCTCTCACAACAAACT 1907
||| | |||||||| || | | | || || ||| ||||| | ||||||||| ||||
Sbjct 1927 CCGTCTAGATTCTCCGA-CTTGAAAAACCTTGGAGTGCTCGACGTATCTCACAACCAACT 1985
Query 1908 CGCCGGAAACTTAAACGTCTTAGCTGATCTACAGAACCTCGTCTCACTCAACATCTCATT 1967
| |||||||||||||||| ||| | ||| | || ||||||||||| ||||||||||| |
Sbjct 1986 CACCGGAAACTTAAACGTTTTAACGGATTTGCAAAACCTCGTCTCTCTCAACATCTCCTA 2045
Query 1968 CAACGAATTCTCCGGCGAGTTACCAAACACTCTGTTTTTCAGGAAACTGCCACTCTCTGT 2027
|||||| ||||||||||| ||||| ||||| | |||||| || ||| ||||| ||||
Sbjct 2046 CAACGATTTCTCCGGCGATTTACCCAACACGCCCTTTTTCCGGCGACTTCCACTTTCTGA 2105
Query 2028 TCTTGAATCAAACAAAGGGCTTTTTATCTCGACC-CGACC-CGA---GAATGGGATCCAA 2082
||| | ||||||| |||||||| ||||||| | | | | ||| || | | || |
Sbjct 2106 TCTCGCCTCAAACAGAGGGCTTTACATCTCGAACGCAATCTCGACCCGACCCG-ACCCGA 2164
Query 2083 --ACCCG-ACACCGCTCCGCCGTGAAACTAACCATGTCGATCCTCGTCG-CAG-CAA-GC 2136
||| | | || |||||| ||| | | | || || | || ||||||| | | || ||
Sbjct 2165 CGACCAGGA-ACAGCTCCGTCGTTAGATTGACTATTTTAATTCTCGTCGTC-GTCACTGC 2222
Query 2137 GTCGTTCTTGTTCTCATGGCGATTTACACTCTCGTCAAAGCACAGAAAGTCGCCGGAAAA 2196
||| ||||||||||||||| |||||||||| ||| ||| ||| | ||||||||||
Sbjct 2223 --CGTACTTGTTCTCATGGCGGTTTACACTCTAGTCCGGGCA-AGA--GCCGCCGGAAAA 2277
Query 2197 CA--T----G-AG--GAACTAGATTCTTGGGAAGTGACTCTTTATCAAAAACTCGATTTC 2247
|| | | || ||| ||||||| ||||||||||| ||||| ||||||||||||||
Sbjct 2278 CAACTCCTCGGAGAAGAAATAGATTCGTGGGAAGTGACGCTTTACCAAAAACTCGATTTT 2337
Query 2248 TCAATCGACGACATCGTCAAGAATCTAACTTCAGCTAACGTGATCGGAACTGGAAGCTCC 2307
|||||||||||||| || |||||||| || ||||| |||||||||||||| |||||||||
Sbjct 2338 TCAATCGACGACATTGTTAAGAATCTGACGTCAGCAAACGTGATCGGAACCGGAAGCTCC 2397
Query 2308 GGTGTAGTTTACAG-AGTCACAAT-CCCGTCCGGTGAAACTTTAGCCGTGAAGAAAATGT 2365
||||| |||||| | | | || || ||| ||||| || | | || |||||||||||||
Sbjct 2398 GGTGTGGTTTACCGTA-TAACGATTCCC-TCCGGCGAGTCACTCGCGGTGAAGAAAATGT 2455
Query 2366 GGTCAAAGGAAGAAAACGGAGCGTTTAACTCAGAGATCAACACTCTTGGATCTATTCGAC 2425
||||||||||||| | || ||||||||||| ||||| || ||||| ||||| ||||| |
Sbjct 2456 GGTCAAAGGAAGAGAGTGGTGCGTTTAACTCCGAGATTAAAACTCTAGGATCGATTCGTC 2515
Query 2426 ATCGGAA-CATAATCCGTCT-CTTGGGTTGGTGTTCGAATCGGAATCTGAAGCTTTTGTT 2483
| | ||| ||| | ||||| ||||| |||||| || |||||||||||||| || |||||
Sbjct 2516 A-CAGAAACATCGTTCGTCTTCTTGG-TTGGTGCTCTAATCGGAATCTGAAACTCTTGTT 2573
Query 2484 CTATGATTATCTTCCTAACGGAAGTTTAAGCTCTCTGCTTCATGGTGCCGGTAAAGGAAG 2543
||| || ||||| |||||||| || || || |||| |||||| || ||||| |||||| |
Sbjct 2574 CTACGACTATCTCCCTAACGGTAGCTTGAGTTCTCGGCTTCACGGCGCCGGAAAAGGA-G 2632
Query 2544 TGGAGGAGCTGATTGGCAAGCACGTTACGACGTCGTT-TTAGGCGTTGCACATGCTCTTG 2602
| | | | ||||||| | || || |||||||||||| || || || || ||||| ||||
Sbjct 2633 -G-ATGTGTTGATTGGGAGGCGCGATACGACGTCGTTCTT-GGTGTGGCCCATGCACTTG 2689
Query 2603 CTTATCTTCATCATGATTGTTTACCTC-CGATTCTACACGGTGACGTTAAAGCTATGAAT 2661
||||||| || ||||||||| | || | | ||| |||| |||||||||||||||||||||
Sbjct 2690 CTTATCTCCACCATGATTGTCTCCC-CACAATTATACATGGTGACGTTAAAGCTATGAAT 2748
Query 2662 GTCTTATTGGGTTCC-CGGTTCGAATCTTACTTAGCCGATTTCGGTTTAGCGAAAATCGT 2720
|||||||||||| || | || ||| | |||||||| |||||||||||||| | || | |
Sbjct 2749 GTCTTATTGGGT-CCTCACTTTGAACCCTACTTAGCTGATTTCGGTTTAGCTAGAACCAT 2807
Query 2721 ATCCGGTGAGGGAGTTATCG-A-TGGAGATTCGTCGAAATTGAGTAACCGGCCTCCGTTA 2778
|||||| | | || || | | || || | ||||| | || ||||||||| |
Sbjct 2808 CTCCGGTTATCCAAATACCGGAATCGAT-TTAG-CGAAACCCACCAATCGGCCTCCGATG 2865
Query 2779 GCCGGTTCTTACGGCTATATGGCTCCAGAACATGCTTCAATGCAACATATAACCGAAAAG 2838
|| || || || || || |||||||||||||||||||| ||||||| ||| ||||| |||
Sbjct 2866 GCTGGCTCCTATGGTTACATGGCTCCAGAACATGCTTCGATGCAACGTATTACCGAGAAG 2925
Query 2839 AGTGATGTGTATAGCTATGGAGTGGTGCTACTAGAAGTTTTAACCGGGAAGCATCCATTG 2898
|| ||||| ||||| || || ||||| | |||| ||||||||||| |||||||| ||
Sbjct 2926 AGCGATGTTTATAGTTACGGGGTGGTATTGTTAGAGGTTTTAACCGGAAAGCATCCGTTA 2985
Query 2899 GATCCGGATCTACCCGGTGGTGCTCATTTGGTTCAA-TGGGTGAGAGATCATTTAGCCG- 2956
|||||||||||||| || ||||| ||||||||| || |||||||||||||| || || |
Sbjct 2986 GATCCGGATCTACCAGGAGGTGCACATTTGGTT-AAGTGGGTGAGAGATCACTTGGCTGA 3044
Query 2957 GAAAGAAAGATCCTAG-AGAAATTCTTGACCCGAGACTCCGC-GGACGGGCAGA-TCCCA 3013
|||| ||||||||||| || ||||||| ||||||||| | |||||| | || || |
Sbjct 3045 GAAA-AAAGATCCTAGCAGGC-TTCTTGATCCGAGACTC-GATGGACGGACTGACTCG-A 3100
Query 3014 TAATGCATGAGATGCTACAAACTCTAGCAGTCGCGTTCCTT-TGCGTGAGCAACAAGGCA 3072
|||||||||||||||| |||||||| || || |||||| || || || ||||||||||||
Sbjct 3101 TAATGCATGAGATGCTTCAAACTCTTGCGGTTGCGTTC-TTGTGTGTTAGCAACAAGGCA 3159
Query 3073 G-CTGATAGG-CCTATGATGAAAGACATTGTGGCGATGCTTAAAGAGATTAGACAGT-TT 3129
| || | | ||| | |||||||| ||||||| ||||| | ||| || || || | ||
Sbjct 3160 AAC-GA-ACGACCTTTAATGAAAGATGTTGTGGCAATGCTCACAGAAATAAGGCA-TATT 3216
Query 3130 GATATCG-AGCGATCGGAAACCGATATGATTAAAGGGGGAAAATGCG-AA--AAATGGCA 3185
||| | | | ||||||| || || | ||| |||| || |||| || ||| | |
Sbjct 3217 GATGTTGGAA-GATCGGAGACAGAGAAGATCAAAGCTGGTGGTTGCGGAAGCAAA-G--A 3272
Query 3186 GCCGCAACCGTT-AC--C-ACCGGAGAAAATTGTCAATACTCCTCGAGGTTCATCTAATT 3241
||| |||| || | | | | ||||||| ||||| ||| || | ||| |||||||
Sbjct 3273 GCCACAACAATTTATGTCGAATG-AGAAAATCATCAATTCTCA-CG-G-TTCGTCTAATT 3328
Query 3242 GTTCGTTTGC-TTTCTCGGATGAATCCGTATAA 3273
|||| ||||| ||| |||||||| ||||| |||
Sbjct 3329 GTTCATTTGCGTTT-TCGGATGACTCCGTTTAA 3360
> AT4G26542.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT4G26540 | chr4:13395493-13397838 FORWARD
LENGTH=2346
Length=2346
Score = 1618 bits (876), Expect = 0.0
Identities = 1895/2378 (80%), Gaps = 105/2378 (4%)
Strand=Plus/Minus
Query 208 AGAGGTCAAGTCTCGGAGATACAACTCCAA-GTCATGGATTTTCAAGGTCCGT-TACCGG 265
|||||| |||| ||||||||||| ||| || || ||||| || |||||| | | | ||||
Sbjct 2338 AGAGGTGAAGTTTCGGAGATACAGCTCAAAGGT-ATGGACTTGCAAGGTTC-TCTGCCGG 2281
Query 266 CGACGAATCTCCGGCAG-TTAAAGTCTCTGACTTTACTCAGTTTAACCTC-CGTGAATCT 323
||| | ||||||| || | |||||||| |||| |||| |||| | || | |||||||
Sbjct 2280 TGACTAGTCTCCGG-AGCCTCAAGTCTCTTACTTCCCTCACTTTATCTTCAC-TGAATCT 2223
Query 324 CACCGG-TTCAATTCCTAAAGAGCTTGGAGACTTGTCGGAGCTAGAAGTT-CTTGATTTA 381
|||||| | ||| || || ||| | |||||||| ||||||| | |||| || |||||
Sbjct 2222 CACCGGAGT-AATCCCCAAGGAGATCGGAGACTTCACGGAGCTTG-AGTTACTCGATTT- 2166
Query 382 G-CTGATAATTCTCTCTCTGGTGAAATCCCAGTGGAAATCTTCAAGCTCAAGAAACTCAA 440
| | |||||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||
Sbjct 2165 GTCGGATAATTCTCTCTCCGGTGATATCCCTGTGGAAATCTTCAGGCTCAAGAAACTCAA 2106
Query 441 GACTCTGTCTCTCAACACAAACAATCTCGAAGGT-GTGATTCC-ATCGGAG-TTAGGGAA 497
|||||||||||| ||||| |||||||| |||||| | ||||| || |||| || |||||
Sbjct 2105 GACTCTGTCTCTGAACACTAACAATCTAGAAGGTCAT-ATTCCGAT-GGAGATT-GGGAA 2049
Query 498 TC--TCGTGAACCTCGTCGAGCTCACT-CTCTTCGACAATAAACTCGCCGGAGAGATTCC 554
|| ||| | ||||| ||||| | | || |||||||| || || |||||||||| ||
Sbjct 2048 TCTTTCG-G-GTCTCGTAGAGCTTA-TGCTTTTCGACAACAAGCTATCCGGAGAGATCCC 1992
Query 555 TAGAACCATCGGAGAACTCAAGAATCTAGAAATCTTCCGTGCAGGTGGGAACAAGAATCT 614
|| | |||||||| |||||||||||| || |||| ||||| |||||||||||||||||
Sbjct 1991 AAGGAGTATCGGAGAGCTCAAGAATCTACAAGTCTTACGTGCTGGTGGGAACAAGAATCT 1932
Query 615 CAGAGGAGAGCTTCCTTGGGAGATTGGTAACTGCGAGAGTCTTGTGACT--TTAGGTCTC 672
||||| ||||||||||||||||| ||||||||||||| |||||| | | || ||||||
Sbjct 1931 AAGAGGTGAGCTTCCTTGGGAGATAGGTAACTGCGAGAATCTTGT-AATGCTT-GGTCTC 1874
Query 673 GCCGAAACAAGTCTCTCCGGTAAACTTCCGGAGTCGATCGGAGACCTGAAAAAAGTTCAG 732
|| || || ||||||||||| |||||||||| |||||| ||| |||||||| ||||||
Sbjct 1873 GCTGAGACTAGTCTCTCCGGGAAACTTCCGGCGTCGATTGGAAACCTGAAACGTGTTCAG 1814
Query 733 ACAATAGCCCTGTACACGTCACTCTTGTCTGGTCCAATCCCTGATGAGATTGGAAACTGC 792
|||||||| | |||||||||||||||||||||||||| || |||||||||||| |||||
Sbjct 1813 ACAATAGCAATTTACACGTCACTCTTGTCTGGTCCAATTCCGGATGAGATTGGATACTGC 1754
Query 793 ACAGAGCTTCAAAACCTCTACTTGTACCAAAACTCAATCTCTGGATCGATTCCT-TCATC 851
|||||||| ||||||||||||||||| || || |||||||| |||||||| ||| || |
Sbjct 1753 ACAGAGCTCCAAAACCTCTACTTGTATCAGAATTCAATCTCAGGATCGATCCCTACCACC 1694
Query 852 ACTGGGACGTCTCAAGAAGCTTCAAAGTCTTCTCTTATGGCAAAACAATCTCGTCGGAAA 911
| | ||| || | |||||||| || ||||| || |||||||| ||||||||||| || ||
Sbjct 1693 A-TTGGAGGTTTAAAGAAGCTGCAGAGTCTACTTTTATGGCAGAACAATCTCGTTGGGAA 1635
Query 912 AATACCC-ACCGAGCTAGGCACCTGTCCGGAGCTTTTCCTCGTCGATTTATCTGAAAATC 970
||| ||| |||||||| || | |||||| ||||| | || ||||||| || || ||||
Sbjct 1634 AAT-CCCAACCGAGCTTGGGAACTGTCCCGAGCTCTGGCTTATCGATTTTTCCGAGAATC 1576
Query 971 TTCTCACCGGAAACATCCCAAGAAGCTTCGGAAACCTTCCA-AATCTCCAAGAACTTCAG 1029
| |||||||| | ||||||||| ||||||||||| ||| | ||||| ||||| ||||||
Sbjct 1575 TCCTCACCGGGACCATCCCAAGGAGCTTCGGAAAACTT-GAGAATCTACAAGAGCTTCAG 1517
Query 1030 CTCAGCGTTAACCA-ACTCTCCGGTACAATCCCTGAAGAGCTCGCGAACTGCACGAAGCT 1088
|| || || ||||| | |||| || ||||||||||||||||| |||| |||||||||||
Sbjct 1516 CTGAGTGTAAACCAGA-TCTCAGGAACAATCCCTGAAGAGCTAACGAATTGCACGAAGCT 1458
Query 1089 AACACATTTAGAGATCGATAACAACCAAATCTCCGGCGAGATTCCACCGTTGATCG-GAA 1147
|| |||||||||||||| || || | ||| | || |||||||| | ||||| | | |
Sbjct 1457 GACGCATTTAGAGATCGACAATAATCTCATCACAGGAGAGATTCCGTCATTGAT-GAGTA 1399
Query 1148 AATTAACAAGCTTGACGATGTTCTTCGCGTGGCAGAATC-AGTTAACCGGAAAAATTCCA 1206
| ||| |||||| || ||||||||||| |||||||| | ||||||| ||||| || ||
Sbjct 1398 ACCTAAGAAGCTTAACCATGTTCTTCGCATGGCAGAA-CAAGTTAACTGGAAACATCCCT 1340
Query 1207 GAATCTCTTTCTCAATGCCAAGAGCTTCAAGCGATCGATCTCTCTTACAATAATCTCTCT 1266
|| ||| || || || | ||||||||||| ||||||||||||||||| | |||||||
Sbjct 1339 CAAAGTCTCTCCCAGTGTCGTGAGCTTCAAGCCATCGATCTCTCTTACAACAGTCTCTCT 1280
Query 1267 GGTTCGATACCTAATGGA-ATCTTCGAAATACGAAACCTCACGAAGCTTCTTCTTCTCTC 1325
|| || || || || || || |||| |||||||||||||||||||||||||||||||
Sbjct 1279 GGCTCCAT-CCCAAAAGAGATATTCGGGTTACGAAACCTCACGAAGCTTCTTCTTCTCTC 1221
Query 1326 TAACT-ACTTATCTGGATTCATACCACCGGATATTGGAAACTGCACGAATCTCTACAGGT 1384
|| | | || || || |||||||| ||||||||||||||||| |||||||| ||| |||
Sbjct 1220 CAA-TGATTTGTCGGGTTTCATACCTCCGGATATTGGAAACTGTACGAATCTTTACCGGT 1162
Query 1385 TAAGACTCAACGGAAACAGACTTGCGGGGAA-TATTCCGGCGGAGATTGGGAATCTGAAA 1443
||||||||||||| |||||||| || || || ||| ||| |||| || ||||||||||||
Sbjct 1161 TAAGACTCAACGGTAACAGACTCGCCGG-AAGTATCCCGTCGGAAATCGGGAATCTGAAA 1103
Query 1444 AA-CATCAACTTTATCGATATAAGTGATAATCGTCTCATCGGAAACATTCC-TCCGGCGA 1501
|| | |||||||| | ||||||||||| || |||||| |||| || ||| ||||||||
Sbjct 1102 AATC-TCAACTTTGTTGATATAAGTGAGAACCGTCTCGTCGGGT-CAATCCCTCCGGCGA 1045
Query 1502 TCTCCGGTTGT-ACAAGTCTCGAATT-CGTCGATCTACATTCAAACGGTTTAACCGGTGG 1559
|||| |||||| | ||| ||||| || | ||||||| || | || || | |||||
Sbjct 1044 TCTCTGGTTGTGA-AAGCCTCGAGTTTC-TCGATCTTCACACGAATAGTCTCTCCGGTTC 987
Query 1560 TTTACCCGGTAC-ACT-TCCGAG-GAGCTTACAA-TTCATCGATTTATCCGATAATTCAT 1615
|| | |||||| || ||| | |||||| || ||||||||||| ||||||||| | |
Sbjct 986 ATTGCTCGGTACTACACTCCCAAAGAGCTTG-AAGTTCATCGATTTCTCCGATAATGC-T 929
Query 1616 -TAACCGGTCCTCTACCAACCGG-AATCGGATCGTTAACCGAACTAACGAAGCTCAATCT 1673
| || || |||| || |||| ||| |||| ||| || || || || |||||||||||
Sbjct 928 CTGTCCAGTACTCTGCCT-CCGGGAATAGGATTGTTGACAGAGCTTACAAAGCTCAATCT 870
Query 1674 CGCTAAGAACCGATTCTCCGGCGAAATCCCAAGAGAGATCTCGTCTTGTCGGAGTCTTCA 1733
||| |||||| |||| |||||||||||||| ||||| ||||| ||||||||||||| ||
Sbjct 869 CGCCAAGAACAGATTATCCGGCGAAATCCCTAGAGAAATCTCCACTTGTCGGAGTCTACA 810
Query 1734 GCTTCTCAACCTTGGCGACAAT-AGCTTCACCGGAGAAATCCCAAACGACCTAGGACGAA 1792
||||||||| || ||||| ||| | ||| | || |||||||| |||| | || | ||
Sbjct 809 GCTTCTCAATCTCGGCGAAAATGA-CTTTTCTGGTGAAATCCCTGACGAATTGGGTCAAA 751
Query 1793 TCCCGTCTCTTGCCATAGCTCTGAATCTCAGCTGCAATAACTTCGCCGGAGAAATCCCGA 1852
|||||||||| || ||| |||| |||||||||||||||| |||| |||||||||||||
Sbjct 750 TCCCGTCTCTGGCGATATCTCTTAATCTCAGCTGCAATAGGTTCGTCGGAGAAATCCCGT 691
Query 1853 CGAGATTCTC-GAGCCTCACTAATCTCGGAACCCTCGATATCTCTCACAACAAACTCGCC 1911
| |||||||| || | | | || || ||| ||||| | ||||||||| ||||| ||
Sbjct 690 CTAGATTCTCCGA-CTTGAAAAACCTTGGAGTGCTCGACGTATCTCACAACCAACTCACC 632
Query 1912 GGAAACTTAAACGTCTTAGCTGATCTACAGAACCTCGTCTCACTCAACATCTCATTCAAC 1971
|||||||||||||| ||| | ||| | || ||||||||||| ||||||||||| | ||||
Sbjct 631 GGAAACTTAAACGTTTTAACGGATTTGCAAAACCTCGTCTCTCTCAACATCTCCTACAAC 572
Query 1972 GAATTCTCCGGCGAGTTACCAAACACTCTGTTTTTCAGGAAACTGCCACTCTCTGTTCTT 2031
|| ||||||||||| ||||| ||||| | |||||| || ||| ||||| |||| |||
Sbjct 571 GATTTCTCCGGCGATTTACCCAACACGCCCTTTTTCCGGCGACTTCCACTTTCTGATCTC 512
Query 2032 GAATCAAACAAAGGGCTTTTTATCTCGACC-CGACC-CGA---GAATGGGATCCAA--AC 2084
| ||||||| |||||||| ||||||| | | | | ||| || | | || | ||
Sbjct 511 GCCTCAAACAGAGGGCTTTACATCTCGAACGCAATCTCGACCCGACCCG-ACCCGACGAC 453
Query 2085 CCG-ACACCGCTCCGCCGTGAAACTAACCATGTCGATCCTCGTCG-CAG-CAA-GCGTCG 2140
| | | || |||||| ||| | | | || || | || ||||||| | | || || ||
Sbjct 452 CAGGA-ACAGCTCCGTCGTTAGATTGACTATTTTAATTCTCGTCGTC-GTCACTGC--CG 397
Query 2141 TTCTTGTTCTCATGGCGATTTACACTCTCGTCAAAGCACAGAAAGTCGCCGGAAAACA-- 2198
| ||||||||||||||| |||||||||| ||| ||| ||| | ||||||||||||
Sbjct 396 TACTTGTTCTCATGGCGGTTTACACTCTAGTCCGGGCA-AGA--GCCGCCGGAAAACAAC 340
Query 2199 T----G-AG--GAACTAGATTCTTGGGAAGTGACTCTTTATCAAAAACTCGATTTCTCAA 2251
| | || ||| ||||||| ||||||||||| ||||| |||||||||||||| ||||
Sbjct 339 TCCTCGGAGAAGAAATAGATTCGTGGGAAGTGACGCTTTACCAAAAACTCGATTTTTCAA 280
Query 2252 TCGACGACATCGTCAAGAATCTAACTTCAGCTAACGTGATCGGAACTGGAAGCTCCGGTG 2311
|||||||||| || |||||||| || ||||| |||||||||||||| |||||||||||||
Sbjct 279 TCGACGACATTGTTAAGAATCTGACGTCAGCAAACGTGATCGGAACCGGAAGCTCCGGTG 220
Query 2312 TAGTTTACAG-AGTCACAAT-CCCGTCCGGTGAAACTTTAGCCGTGAAGAAAATGTGGTC 2369
| |||||| | | | || || ||| ||||| || | | || |||||||||||||||||
Sbjct 219 TGGTTTACCGTA-TAACGATTCCC-TCCGGCGAGTCACTCGCGGTGAAGAAAATGTGGTC 162
Query 2370 AAAGGAAGAAAACGGAGCGTTTAACTCAGAGATCAACACTCTTGGATCTATTCGACATCG 2429
||||||||| | || ||||||||||| ||||| || ||||| ||||| ||||| || |
Sbjct 161 AAAGGAAGAGAGTGGTGCGTTTAACTCCGAGATTAAAACTCTAGGATCGATTCGTCA-CA 103
Query 2430 GAA-CATAATCCGTCT-CTTGGGTTGGTGTTCGAATCGGAATCTGAAGCTTTTGTTCTAT 2487
||| ||| | ||||| ||||| |||||| || |||||||||||||| || ||||||||
Sbjct 102 GAAACATCGTTCGTCTTCTTGG-TTGGTGCTCTAATCGGAATCTGAAACTCTTGTTCTAC 44
Query 2488 GATTATCTTCCTAACGGAAGTTTAAGCTCTCTGCTTCA 2525
|| ||||| |||||||| || || || |||| ||||||
Sbjct 43 GACTATCTCCCTAACGGTAGCTTGAGTTCTCGGCTTCA 6
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 162841896978
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5