BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg917298 Length=1224 Score E Sequences producing significant alignments: (Bits) Value AT5G56090.1 | Symbols: COX15 | cytochrome c oxidase 15 | chr5:2... 1424 0.0 AT5G56110.1 | Symbols: AtMYB103, ATMYB80, MYB103, MS188 | myb d... 660 0.0 > AT5G56090.1 | Symbols: COX15 | cytochrome c oxidase 15 | chr5:22714518-22716835 FORWARD LENGTH=1720 Length=1720 Score = 1424 bits (771), Expect = 0.0 Identities = 814/835 (97%), Gaps = 2/835 (0%) Strand=Plus/Plus Query 391 CATCGAATGTGGGGAAGAGGATTGGGAATCATGTTTGCTTTGCCGTTTTCTTATTTTCTG 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 657 CATCGAATGTGGGGAAGAGGATTGGGAATCATGTTTGCTTTGCCGTTTTCTTATTTTCTG 716 Query 451 CGGAAAGGGTATATTACTCTACGTCTTGGAGTTCAGCTCTCTGGTTTATTTGCGCTTGGT 510 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 717 CGTAAAGGGTATATTACTCTACGTCTTGGAGTTCAGCTCTCTGGTTTATTTGCGCTTGGT 776 Query 511 GCTGGACAAGGTCTCATTGGTTGGTGGATGGTTAAAAGTGGTTTAGAGGAGCCGCCGTCT 570 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 777 GCTGGACAAGGTTTCATTGGTTGGTGGATGGTTAAAAGTGGTTTAGAGGAGCCACCGTCT 836 Query 571 GAATATTCTCAACCGAGGGTAAGCCCATACCGTCTTGCAGCTCACCTGACCTCAGCTTTT 630 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 837 GAGTATTCTCAACCGAGGGTAAGCCCATACCGTCTTGCAGCTCACCTGACCTCAGCTTTT 896 Query 631 GCCATTTATTGTGGACTTTTCTGGACCGCTCTCTCTGTTGTTATGCCTGAACCACCAGCT 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 897 GCCATTTATTGTGGACTTTTCTGGACCGCTCTCTCTGTTGTTATGCCTGAACCACCAGCT 956 Query 691 GAGTCACTGGCTTGGGTTCGGGGAGCAGCTAAAGTGAAGAAGCTTGCATTACCAGTAAGC 750 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 957 GAGTCACTGGCTTGGGTTCGCGGAGCAGCTAAAGTGAAGAAGCTTGCATTACCAGTAAGC 1016 Query 751 TTGATTGTTGGTATCACTACGATTTCAGGAGCATTTGTTGCTGGAAATGATGCTGGTCGT 810 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 1017 TTGATTGTTGGTATCACTGCAATTTCAGGAGCATTTGTTGCTGGAAATGATGCTGGTCGT 1076 Query 811 GCATTCAACACATT-CCCAAAAATGGGTGACACATGGATCCCAGATAATATATTTGAGAT 869 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1077 GCATTCAACACATTTCCCAAAA-TGGGTGACACATGGATCCCAGATAATATATTTGAGAT 1135 Query 870 GAAACCACTTTTACGCAACTTTTTCGAGAACACAGCAACTGTTCAGCTTGATCATCGCCT 929 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1136 GAAACCACTTTTACGCAACTTTTTCGAGAACACAGCAACTGTTCAGCTTGATCATCGCCT 1195 Query 930 TCTTGCAACCACAACGCTAATAGCAATTGGAACAATGTGGTGGTTCACAAGGAAGCTAGA 989 ||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1196 TCTGGCAACCACAACATTAATCGCAATCGGAACAATGTGGTGGTTCACAAGGAAGCTAGA 1255 Query 990 CATACATCCAGCCGTTAAAGCTTTGATCGGAAGTACTGTGGGAATGACTGCTGTTCAGGT 1049 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1256 CATACATCCAGCTGTTAAAGCTTTGATCGGAAGTACTGTTGGAATGACTGCTGTTCAGGT 1315 Query 1050 GACATTAGGTGTATTAACGCTTCTGAGTTATGTTCCGGTCTCACTAGGAAGTGCACATCA 1109 |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| || Sbjct 1316 GACATTAGGTGTATCAACGCTTCTGAGTTATGTTCCGGTTTCACTAGGAAGTGCACACCA 1375 Query 1110 AGCAGGAGCTTTAACACTTCTCACTTTGATGCTACTTCTCAATCACACTCTTCGGAGGCC 1169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1376 AGCAGGAGCTTTAACACTTCTCACTTTGATGCTACTTCTCAATCACACTCTTCGGAGGCC 1435 Query 1170 ATCGCCTTCTCTTCTCAAATCCCTTCCACAAGTTGCTAAATCAAATTTCAGCTAA 1224 ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1436 ATCACCTTCTCTTCTCAAATCTCTTCCACAAGTTGCTAAATCAAATTTCAGCTAA 1490 > AT5G56110.1 | Symbols: AtMYB103, ATMYB80, MYB103, MS188 | myb domain protein 103 | chr5:22719191-22720664 FORWARD LENGTH=963 Length=963 Score = 660 bits (357), Expect = 0.0 Identities = 385/399 (96%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 1 ATGGGTCGGATTCCATGTTGTGAAAAGGAGAATGTGAAGAGAGGACAATGGACTCCTGAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGGTCGGATTCCATGTTGTGAAAAGGAGAATGTGAAGAGAGGACAATGGACTCCTGAA 60 Query 61 GAAGACAACAAATTGGCTTCTTATATTGCTCAACATGGTACTCGTAATTGGCGTCTCATC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GAAGACAACAAATTGGCTTCTTATATTGCTCAACATGGTACTCGTAATTGGCGTCTCATC 120 Query 121 CCTAAGAACGCTGGGTTGCAAAGATGCGGGAAGAGTTGTAGGCTGCGATGGACGAACTAT 180 |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 121 CCTAAGAATGCTGGGTTGCAAAGATGTGGGAAGAGTTGTAGGCTGCGATGGACAAACTAT 180 Query 181 TTGCGTCCGGATTTGAAACACGGCCAGTTCTCGGAGACTGAGGAACATATCATTGTCAAG 240 ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| Sbjct 181 CTGCGTCCGGATTTGAAACATGGCCAGTTCTCGGAGGCTGAAGAACATATCATTGTCAAG 240 Query 241 TTTCACTCTGTTCTTGGTAACCGGTGGTCGTTGATTGCGGCGCAACTTCCTGGTCGAACG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 241 TTTCACTCTGTTCTTGGTAACCGGTGGTCGTTGATTGCGGCGCAACTTCCTGGTCGGACA 300 Query 301 GACAACGATGTGAAAAACTATTGGAACACGAAGCTGAAGAAGAAGTTGTCGGGAATGGGA 360 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 301 GACAACGATGTGAAAAATTATTGGAACACGAAGCTGAAGAAGAAGTTGTCAGGAATGGGA 360 Query 361 ATAGATCCAGTGACCCACAAGCCTTCCTCGCATCGAATG 399 |||||||| |||||||||||||||| |||||||| |||| Sbjct 361 ATAGATCCGGTGACCCACAAGCCTTTCTCGCATCTAATG 399 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60140252910 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5