BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg917385 Length=264 Score E Sequences producing significant alignments: (Bits) Value AT5G56920.1 | Symbols: | Cystatin/monellin superfamily protein... 241 3e-63 > AT5G56920.1 | Symbols: | Cystatin/monellin superfamily protein | chr5:23024896-23025915 FORWARD LENGTH=938 Length=938 Score = 241 bits (130), Expect = 3e-63 Identities = 167/185 (90%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 1 ATGGAGGACTCTGGTTTGATAGAGGTTAACTGTCACCGGCCTCAAAAGATTCCAAAGTTG 60 |||| ||||||| |||||| |||||||||| || ||||||| |||||||||| |||||| Sbjct 105 ATGGCGGACTCTCTTTTGATGGAGGTTAACTATCGCCGGCCTGAAAAGATTCCGAAGTTG 164 Query 61 GACGAAGATTGCGAAGGATCGAAATCTTCCTCGAAACAGCGCGTGATCAAGTGGGGAA-A 119 ||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||| | Sbjct 165 GACGAAGATTGTGAAGGATCGGAATCTTCGTCGAAACAGCGCGTGGTCAAGTGGGGAACA 224 Query 120 GGGGGAAGATGACGAATACTTACGACAGTATTTGTTGTTTCACTATCAATTCGAGAAAAC 179 | ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 225 -GCGGAAGATGATGAATACTTGCGACAGTATTTGTTGTTTCACTATCAATTCCAGAAAAC 283 Query 180 TCAGG 184 ||||| Sbjct 284 TCAGG 288 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12064259760 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5