BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg917426
Length=1773
Score E
Sequences producing significant alignments: (Bits) Value
AT5G57200.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | c... 2789 0.0
AT4G25940.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | c... 1382 0.0
> AT5G57200.1 | Symbols: | ENTH/ANTH/VHS superfamily protein |
chr5:23177696-23180601 FORWARD LENGTH=1776
Length=1776
Score = 2789 bits (1510), Expect = 0.0
Identities = 1693/1781 (95%), Gaps = 13/1781 (1%)
Strand=Plus/Plus
Query 1 ATGGGAACGTTCACGAGCTTTCGAAAAGCGTATGGAGCACTCAAAGACACAACCACCGTT 60
||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct 1 ATGGGAACGTTCACGAGCTTTCGAAAAGCCTATGGAGCGCTCAAAGATACAACCACCGTT 60
Query 61 GGTCTCGCTAAGGTCAACAGCGAATTCAAGGATTTAGATATTGCGATCGTTAAAGCAACC 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 61 GGTCTCGCTAAGGTCAACAGCGAATTCAAGGATTTAGATATTGCGATCGTCAAAGCGACG 120
Query 121 AATCATGTTGAATCTCCACCAAAAGAACGTCATGTTCGTAAAATATTCTCGGCGACATCT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AATCATGTTGAATCTCCACCAAAAGAACGTCATGTTCGTAAAATATTCTCGGCGACATCT 180
Query 181 GTAATACAACCACGAGCAGATGTAGCTTATTGCATTCATGCATTATCTAAAAGATTATCG 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GTGATACAACCACGAGCAGATGTAGCTTATTGCATTCATGCATTATCTAAAAGATTATCG 240
Query 241 AAAACTCGCAATTGGGTTGTTGCAATGAAGGTGTTAATAGTAATTCACAGAACATTAAGA 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 241 AAAACTCGCAATTGGGTTGTTGCAATGAAAGTGTTAATAGTAATTCACAGAACATTAAGA 300
Query 301 GAAGGTGATCCAACATTCAGAGAAGAGCTTCTAAATTACTCACATAGAAGACATATACTC 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GAAGGTGATCCAACATTTAGAGAAGAGCTTCTAAATTACTCACATAGAAGACATATACTC 360
Query 361 AGAATATCTAACTTCAAAGACGATACAAGTCCTCTTGCGTGGGATTGTTCTGCTTGGGTT 420
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 361 AGAATATCTAACTTCAAAGATGACACAAGTCCTCTTGCGTGGGATTGTTCTGCTTGGGTT 420
Query 421 AGAACATACGCGCTCTTTCTTGAAGAGCGGCTTGAATGTTATCGGGTTTTAAAGTATGAC 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 421 AGAACATACGCGCTCTTTCTAGAAGAGCGGCTTGAATGTTATCGGGTTTTAAAGTATGAC 480
Query 481 ATCGAGGCAGAGCGTTTACCAAAAGCTTCAGGTGCAGCTTCCAAGACGCATAGAACAAGG 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 481 ATCGAGGCAGAGCGTTTACCAAAAGCTTCAGGTGCAGCTTCAAAGACGCATAGAACAAGG 540
Query 541 ATGTTGTCTGGTGAAGATCTATTAGAACAATTACCCGCGTTACAACAGCTTCTTTACCGG 600
|||||||||||||||||| | |||||||| ||||| || || ||||||||||||||||||
Sbjct 541 ATGTTGTCTGGTGAAGATTTGTTAGAACAGTTACCTGCATTGCAACAGCTTCTTTACCGG 600
Query 601 CTTATCGGATGTCAGCCTGAAGGAGCAGCTTATAGCAACTATCTAATCCAATACGCTCTT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 601 CTTATCGGATGTCAGCCTGAAGGAGCAGCTTATAGCAACTATCTAATCCAATATGCTCTT 660
Query 661 GCATTGGTGCTTAAAGAAAGCTTCAAAATCTATTGTGCCATCAATGATGGAATCATTAAT 720
|||||||||||||||||||||||||||||||||||||| || || |||||||||||||||
Sbjct 661 GCATTGGTGCTTAAAGAAAGCTTCAAAATCTATTGTGCTATAAACGATGGAATCATTAAT 720
Query 721 CTTGTAGACATGTTCTTTGAGATGTCAAGACATGATGCAGTTAAAGCTCTAAACGTATAC 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 721 CTTGTAGACATGTTCTTTGAGATGTCAAGACATGATGCAGTTAAAGCTCTAAACATATAC 780
Query 781 AAACGGGCTGGTCAACAGGCTGAAAATCTGGCTGAGTTTTATGATTACTGCAAAGGGCTA 840
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 781 AAACGGGCTGGTCAACAGGCTGAAAATCTAGCTGAGTTTTATGATTACTGCAAAGGACTA 840
Query 841 GAGCTAGCTAGGAACTTTCAGTTCCCAACCTTAAGACAGCCTCCTCCTTCGTTTCTCGCG 900
||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 841 GAGCTTGCTAGAAACTTTCAGTTCCCAACTTTAAGACAGCCTCCTCCTTCGTTTCTGGCG 900
Query 901 ACAATGGAAGAGTACATTAAAGAAGCGCCTCAGAGTGGTTCTGTACagaaaaaactggag 960
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 901 ACAATGGAAGAGTACATTAAAGAAGCGCCTCAAAGTGGTTCTGTACAGAAAAAGCTGGAG 960
Query 961 tatcaggaaaaagaggaagaagaagaagaacaagaacaa---cagcctgaagaacctgca 1017
|||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||
Sbjct 961 TATCAGGAAAAAGAGGAAGAAGAACAAGAACAAGAAGAAGAACAGCCTGAAGAACCAGCA 1020
Query 1018 gaagaagaaaaccaaaacgaaaacaccgaaaaTGATCAGCCGGTTATCgaagaagaggaa 1077
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1021 GAAGAAGAAAACCAAAACGAAAACACCGAAAATGATCAGCCGCTTATCGAAGAAGAGGAA 1080
Query 1078 gaagagcctgaagaggagaaaaaagaggaagaagCTAAACCTTCACCATTGATAGACACT 1137
||||||||| ||||||||| | ||| |||||||||||||||||||||| |||||||||||
Sbjct 1081 GAAGAGCCTAAAGAGGAGATAGAAGTGGAAGAAGCTAAACCTTCACCACTGATAGACACT 1140
Query 1138 GATGACTTACTGGGAT-TGCATGAAATAAATCCAAAAGCCGCAGAGATTGAGCAAAACAA 1196
||||||||||| || | ||||||||||||| || |||||||||||||| |||||||||||
Sbjct 1141 GATGACTTACTAGG-TCTGCATGAAATAAACCCGAAAGCCGCAGAGATAGAGCAAAACAA 1199
Query 1197 CGCATTCGCTCTCGCGATATATCCACCAGGACATGAAACTTCAGGCCCATCTAATAGTCT 1256
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1200 CGCATTCTCTCTCGCGATATATCCACCAGGACATGAAACTTCAGCCCCATCTAATAGTCT 1259
Query 1257 AAGCTTAATAGAAGCTGGAGGAAGTGGTTGGGAACTTGCACTAGTCACACCACAGaacaa 1316
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 AAGCTTAATAGAAGCAGGGGGAAGTGGTTGGGAACTTGCACTAGTCACACCACAGAACAA 1319
Query 1317 caacaacaacaataacaacaaTCCTCGTCCCGCAATAGCAACAAAACTCGGTGGAGGATT 1376
||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1320 CAACAACAA---TAACAACAATCCTCGTCCCGTTATAGCAACAAAACTCGGCGGAGGATT 1376
Query 1377 CGACAATCTTCTACTAGACAGTCTCTACGAAGACGATACAGCAAGAAGACAGATCCAATT 1436
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 1377 CGACAATCTTCTACTAGACAGTCTTTACGAAGACGATACAGCAAGAAGACAGATTCAGTT 1436
Query 1437 AACAAACGCCGGTTACGGATTTGGAGCCACCGCTATACCCGGAGAACCAGCCTT-ATCAA 1495
|||||||||||||||||||||||||||||| ||||||||||||| || ||| || ||| |
Sbjct 1437 AACAAACGCCGGTTACGGATTTGGAGCCACGGCTATACCCGGAGCACTAGC-TTCATCGA 1495
Query 1496 ACCCAAACCCATTCGGGATGCAACAAGATCCTTTCGCAATGTCAAACAACATGGCTCCAC 1555
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 ACCCAAACCCGTTCGGGGTGCAACAAGATCCTTTCGCAATGTCAAACAACATGGCTCCAC 1555
Query 1556 CAACCAACGTCCAAATGGCAATGCAACAACAACAAATGATGATGATGAATAATCGAAGTC 1615
||||||| || ||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1556 CAACCAATGTTCAAATGGCAATGCAACAACAACAAATGATGATGATGAATAACCAAAGTC 1615
Query 1616 CATATAACAACAACTATTCACCTTATCATCATCATCAGTTCTCACCAAATCCTTCAACTT 1675
||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1616 CATATAATAACAACTATTCACCATATCATCATCATCAATTCTCACCAAATCCTTCAACTT 1675
Query 1676 C---ATCTCCTAATCCTTTTGGTGACCCTTTCCTTGCCCTCCCAGCTCCTCCTTCATCTG 1732
| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1676 CTTCATCTCCTAACCCTTTTGGTGACCCTTTCCTTGCTCTCCCAGCTCCTCCTTCATCTA 1735
Query 1733 CTACTCAGCAACAACACAGTCATAATCATATGCTTCTCTAG 1773
|||| ||||| ||| |||||| |||||||||||||||||||
Sbjct 1736 CTACACAGCAGCAATACAGTCCTAATCATATGCTTCTCTAG 1776
> AT4G25940.1 | Symbols: | ENTH/ANTH/VHS superfamily protein |
chr4:13169641-13172881 REVERSE LENGTH=2138
Length=2138
Score = 1382 bits (748), Expect = 0.0
Identities = 1507/1854 (81%), Gaps = 129/1854 (7%)
Strand=Plus/Plus
Query 1 ATGGGAACG-TTCACGAGCTTTCGAAAAGCGTAT-GGAGCACTCAAAGACACAACCACCG 58
|||| |||| || || ||||| || ||||| | | |||||| ||||||| | || ||||
Sbjct 182 ATGGCAACGTTTAAC-AGCTTCCGTAAAGC-TGTCGGAGCAATCAAAGATTCCACTACCG 239
Query 59 TTGGTCTCGCTAAGGTCAACAGCGAATTCAAGGATTTAGATATTGCGATCGTTAAA-GCA 117
| || |||| |||||||||||||||||||||||||| ||| ||||||||| |||| ||
Sbjct 240 TAAGTATCGCCAAGGTCAACAGCGAATTCAAGGATTTGGATGTTGCGATCG-TAAAGGCC 298
Query 118 ACCAATCATGTTGAATCTCCACCAAAAGAACGTCATGTTCGTAAAATATTCTCGGCGACA 177
|| ||||| || |||||| | || ||||||||||| |||||| ||||||||||||||||
Sbjct 299 ACAAATCACGTAGAATCTGCTCCCAAAGAACGTCACATTCGTAGAATATTCTCGGCGACA 358
Query 178 TCTGTAATACAACCACGAGCAGATGTAGCTTATTGCATTCATGCATTATCTAAAAGATTA 237
|| ||| | ||||||||||||||||| ||||| |||||||| |||||| | ||||||||
Sbjct 359 TCGGTAGTGCAACCACGAGCAGATGTTGCTTACTGCATTCACGCATTAGCCAAAAGATTG 418
Query 238 TCGAAAACTCGCAATTGGGTTGTTGCAATGAAGGTGTTAATAGTAATTCACAGAACATTA 297
|| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| ||
Sbjct 419 TCAAAAACTCGCAATTGGGTTGTTGCGATCAAGGTGTTAATAGTCATTCATAGAACACTA 478
Query 298 AGAGAAGGTGATCCAACATTCAGAGAAGAGCTTCTAAATTACTCACATAGAAGACATATA 357
|||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||
Sbjct 479 AGAGAAGGTGATCCAACATTTAGAGAAGAGCTTCTCAATTACTCACATAGAGGACATATA 538
Query 358 C-TCAGAATATCTAACTTCAAAGACGATACAAGTCCTCTTGCGTGGGATTGTTCTGCTTG 416
| || ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct 539 CTTC-GAATATCAAACTTCAAAGACGATACAAGTCCTCTTGCTTGGGATTGCTCTGCGTG 597
Query 417 GGTTAGAACATACGCGCTCTTT-CTTGAAGAGCGGCTTGAATGTTATCGGGTTTTAAAGT 475
| |||| ||||||||||| ||| || || |||||||||||||| ||||||||||| ||||
Sbjct 598 GATTAGGACATACGCGCT-TTTCCTCGAGGAGCGGCTTGAATGCTATCGGGTTTTGAAGT 656
Query 476 ATGACATCGAGGCAGAGCGTTTACC-AAA-----A---G---CTTC--AG---GT-G--- 514
||||||| || ||||| |||||||| ||| | | |||| || || |
Sbjct 657 ATGACATAGAAGCAGAACGTTTACCAAAAGGTTCAGGTGCATCTTCAAAGAACGTAGATT 716
Query 515 -C-A-GCTTC-CAAGACGCATAGAACAAGGATGTTGTCTGGTGAAG-ATCTATTAGAACA 569
| | ||||| ||| ||| |||||||||||||| | || | ||||| || | |||| ||
Sbjct 717 TCAATGCTTCTCAA-ACGTATAGAACAAGGATGCTCTCCGATGAAGAAT-TGCTAGAGCA 774
Query 570 ATTACCCGCGTTACAACAGCTTCTTTACCGGCTTATCGGATGTCAGCCTGAAGGAGCAGC 629
||||| || || |||||||| ||||| ||||||| || ||||||||||||||| ||||
Sbjct 775 GTTACCTGCTTTGCAACAGCTGCTTTATAGGCTTATTGGTTGTCAGCCTGAAGGATCAGC 834
Query 630 TTATAGCAACTATCTAATCCAATACGCTCTTGCATTGGTGCTTAAAGAAAGCTTCAAAAT 689
||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 835 ATATAGCAACTACCTAATCCAGTATGCTCTTGCATTGGTGCTTAAAGAAAGCTTCAAAAT 894
Query 690 CTATTGTGCCATCAATGATGGAATCATTAATCTTGTAGACATGTTCTTTGAGATGTCAAG 749
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 CTACTGTGCCATTAATGATGGAATCATTAATCTTGTAGACATGTTCTTTGAGATGTCAAG 954
Query 750 ACATGATGCAGTTAAAGCTCTAAACGTATACAAACGGGCTGGTCAACAGGCTGAAAATCT 809
|||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||| |
Sbjct 955 ACATGATGCAGTTAAAGCTCTAAATATATATAAACGAGCTGGCCAACAGGCTGAAAATTT 1014
Query 810 GGCTGAGTTTTATGATTACTGCAAAGGGCTAGAGCTAGCTAGGAACTTTCAGTTCCCAAC 869
|||||| |||||||| ||||||||||| ||||||||||| || |||||||||||||||||
Sbjct 1015 GGCTGACTTTTATGAATACTGCAAAGGTCTAGAGCTAGCGAGAAACTTTCAGTTCCCAAC 1074
Query 870 CTTAAGACAGCCTCCTCCTTCGTTTC-TCGCGACAATGGAAGAGTACATTAAAGAAGCGC 928
||||||||||||||||||||| |||| | || ||||||||||| ||||||||||||||||
Sbjct 1075 CTTAAGACAGCCTCCTCCTTC-TTTCCTAGCAACAATGGAAGACTACATTAAAGAAGCGC 1133
Query 929 CTCAGAGTGGTTCTGTACagaaaaaactggagtatcaggaaaaagaggaagaagaa---g 985
|||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 1134 CTCAAAGTGGTTCTGTACAGAAAAAGCTGGAGTATCAGGAAAAAGAGGAAGAAGAACAAG 1193
Query 986 aagaacaagaa-ca-a-ca----g-cc----tgaagaacctgcagaagaagaaaaccaaa 1033
||||| ||||| || | || | || ||||||||||||||||| || || ||||
Sbjct 1194 AAGAAGAAGAAGCAGAACACTCTGTCCAGCCTGAAGAACCTGCAGAAGCCGATAATCAAA 1253
Query 1034 acgaaaacaccgaaa-aTGATCAGCCGGTTATCgaagaagaggaagaagagcctgaagag 1092
| ||||||| |||| | || |||||| |||||||||||||||||||||| || ||||
Sbjct 1254 AGGAAAACAGCGAAGGA-GACCAGCCGCTTATCGAAGAAGAGGAAGAAGA-CC--AAGAA 1309
Query 1093 gagaaa-a-aagaggaagaagCTAAACCTTCA--CCATTGATAGACACTGATGA-CTTAC 1147
| ||| | |||||||||| ||||||||||| || | ||||||||||||||| || |
Sbjct 1310 -A-AAATAGAAGAGGAAGATGCTAAACCTTCTTTCC-T-GATAGACACTGATGATCTG-C 1364
Query 1148 TGGGATTGCATGAAATAAATCCAAAAGCCGCAGAGATTGAGCAAA-ACAACGCATTCGCT 1206
||||| | |||| || || || |||||||||||||| ||| | | || ||||| |||
Sbjct 1365 TGGGACTAAATGAGATCAACCCTAAAGCCGCAGAGATAGAGGACCGA-AATGCATTGGCT 1423
Query 1207 CTCGCGATATATCCACCAGGACATGAAACTTCAGGCCCATCTAATAGTCTAAGCTTAATA 1266
|| || |||||||||||||| |||||| || |||| ||||| || | | |||| ||||||
Sbjct 1424 CTTGCAATATATCCACCAGGTCATGAAGCTCCAGGACCATCAAACATTTTAAGTTTAATA 1483
Query 1267 GAAGCTGGAGGAAGTGGTTGGGAACTTG-CACTAGTCACACCACAGaacaacaacaacaa 1325
||| | || ||| || |||||| ||| |||| ||||| || |||||||||||||||||
Sbjct 1484 GAAACCGGTGGATCCGGCTGGGAA-TTGGCACTGGTCACTCCTCAGAACAACAACAACAA 1542
Query 1326 caataacaacaaTCCTCGTCC--CGCAATAGCAACAAAACTCGGTGGAGGATTCGACAAT 1383
|||||| |||||| || ||| || || |||| || | |||||||| ||||||
Sbjct 1543 CAATAA------TCCTCGCCCTGCGCC-TAACACCAAA-CTTGCAGGAGGATTTGACAAT 1594
Query 1384 CT-TCTACTAGACAGTCTCTACGAAGACGATACAGCAAGAAGACAGATCCAATTAACAAA 1442
|| | | || |||||||| ||||| || ||| |||| || ||||||||||| |||| ||
Sbjct 1595 CTAT-TGCTTGACAGTCTGTACGAGGATGATTCAGCTAGGAGACAGATCCAGCTAACCAA 1653
Query 1443 CGCCGGTTACGGATTTGGAGCCACCGCTATACCCGGAGAACCAGCCTTATCAAAC-CCAA 1501
|| || || ||| ||| | || || || | | | | ||| | || | ||||
Sbjct 1654 TGCGGGCTATGGACATGGTGGCA----TAGACAC--A-A-C-AGC---AGCAC-CGCCAA 1700
Query 1502 ACCCATTCGGGATGCAACAAGATCCTTTCGCAATGTCAAACAACATGGCTCCACCAACCA 1561
|||||||| ||||||||||||||||| |||||||| |||||||| ||||| || || |
Sbjct 1701 ACCCATTCCAAATGCAACAAGATCCTTTTGCAATGTCCAACAACATTGCTCCTCCCACTA 1760
Query 1562 ACGTCCAAATGGCAATGCAACAACAACA--AAT----GATGATGATGAATA-ATC-GAAG 1613
| || ||||||||||||||||||||||| || ||||| ||||| | ||| || |
Sbjct 1761 ATGTTCAAATGGCAATGCAACAACAACAGCAACAACAGATGACGATGA-TGCATCAGA-G 1818
Query 1614 TCCATATAACAACAACT-AT--TCACC-TTATCATCA---TCATCAGTTC-TCACCAAAT 1665
||| || || ||| || || ||| ||||||||| |||||| | | ||| || |
Sbjct 1819 TCCCTACAATTACA-CTCATCCTCATGATTATCATCAAAATCATCA-T-CATCATCAGTT 1875
Query 1666 CCTTCAACT--TCAT-CTCCT---AATCCTTTTGGTGACCCTTTCCTTGCCCTCCCAGCT 1719
| | || | || | ||||| ||||||||||| ||| ||||||||||||||||| ||
Sbjct 1876 C-T-CAGCCGGTCCTTCTCCTTCTAATCCTTTTGGAGACGCTTTCCTTGCCCTCCCACCT 1933
Query 1720 CCTCCTTCATCTGCTACTCAGCAACAACACAGTCATAATCATATGCTTCTCTAG 1773
|| || ||| ||| || ||||||| ||| ||| |||||||||| ||||||
Sbjct 1934 CCGCCAGGATCAGCTGGTCCGCAACAAAACAACCATCATCATATGCTCCTCTAG 1987
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87700352115
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5