BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg917668
Length=2538
Score E
Sequences producing significant alignments: (Bits) Value
AT3G46740.1 | Symbols: TOC75-III, MAR1 | translocon at the oute... 1435 0.0
AT4G09080.1 | Symbols: TOC75-IV, ATTOC75-IV | Outer membrane OM... 876 0.0
AT1G35860.1 | Symbols: TOC75-I | translocon outer membrane comp... 654 0.0
AT1G35880.1 | Symbols: | unknown protein; Has 251 Blast hits t... 532 5e-150
> AT3G46740.1 | Symbols: TOC75-III, MAR1 | translocon at the outer
envelope membrane of chloroplasts 75-III | chr3:17215813-17219343
REVERSE LENGTH=2795
Length=2795
Score = 1435 bits (777), Expect = 0.0
Identities = 1701/2139 (80%), Gaps = 96/2139 (4%)
Strand=Plus/Plus
Query 442 gatggcggattttggaggaAATTGTTTTCT-CTGGCAGTACCAGTGGCTGTCGCCGACGA 500
||||| ||||||||| |||||||||||||| || | ||||| || | | || || ||
Sbjct 420 GATGGTGGATTTTGGGGGAAATTGTTTTCTCCT-TC---ACCAGCGG-T-T-GCTGATGA 472
Query 501 AGAACAGTCACCGGATTGGGATTCTCACGGTTTACCGGCGAACATTGTTGTACAGTTGAA 560
|||||| |||||||||||||||||||| |||||||||||||| || ||||| || |||||
Sbjct 473 AGAACAATCACCGGATTGGGATTCTCATGGTTTACCGGCGAATATCGTTGTGCAATTGAA 532
Query 561 CAAGCTAAGTGGTTTGAAAAAGTATAAAATCTCAGATATTATGTTCTTTGATCGACGAAG 620
|||||| |||||||| || |||||||| | || ||||||||||||||||||||||| ||
Sbjct 533 CAAGCTTAGTGGTTTCAAGAAGTATAAGGTATCTGATATTATGTTCTTTGATCGACGGAG 592
Query 621 A-AAAGCCACCGTTGAAACAGATGATTCTTTCTTCGAGATGGTGTCGATTCAAGAAGGAG 679
| ||| |||| ||| || || ||||| |||||||||||||| ||||||| || |
Sbjct 593 ACAAA-CCACTATTGGTACTGAAGATTCCTTCTTCGAGATGGTCTCGATTCGTCCTGGTG 651
Query 680 GAGTTTACACAAAAGCTCAGTTACAGAAGGAG-TTAGAAACCCTAACTACTTGCGG-ATG 737
|||||||||| |||||||| || ||||||||| || ||||||||| ||||||| || ||
Sbjct 652 GAGTTTACACTAAAGCTCAATTGCAGAAGGAGCTT-GAAACCCTAGCTACTTGTGGAAT- 709
Query 738 GTTTGAGAAAGTCGATTTCGAAGGGAAGACGAAGCCTGACGGAACCCTAGGTGTTACAAT 797
|||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 710 GTTTGAGAAAGTTGATTTGGAAGGGAAAACGAAACCTGATGGAACCCTAGGTGTTACAAT 769
Query 798 CTC-TTTCGCAGAGAGCATGTGGCAAGGC-GCGGAGAGATTTCGATGCATCAACGTAGGG 855
||| ||| || ||||| | |||||| | || || || ||| |||| || ||||| |||
Sbjct 770 CTCGTTT-GCTGAGAGTACATGGCAA-TCTGCTGATAGGTTTAGATGTATTAACGTTGGG 827
Query 856 TTAATGACACAACCAAAACCTGTAAAGATTGATTCAGACATGACAGAAAAAGAGATGATT 915
|||||| ||| | |||||| | |||| |||||||| ||||| || ||||||| | ||
Sbjct 828 TTAATGGTACAGTCGAAACCTATTGAGATGGATTCAGATATGACTGATAAAGAGAAGCTT 887
Query 916 GAGTACTT-GAGAAGTCAAGAGAAGGAATATAAGCA-GAGGATTAAGAAGGCGA-GGCCG 972
||||| || || ||| |||||||| || ||| | ||| ||| | | ||| | ||||
Sbjct 888 GAGTA-TTACAGGAGTTTGGAGAAGGATTACAAG-AGGAGAATTGATAGGGC-ACGGCCT 944
Query 973 TGTTTGCTT-CCGGGATC-GAT-TCAACGAGAGGCGATGCTTATGCTAAGGGATCAAAGG 1029
|||||| || || | | | | | | | | |||| |||| ||| | ||||||||| ||
Sbjct 945 TGTTTG-TTGCCTGCACCTG-TGT-ATGGTGAGGTTATGCAGATGTTGAGGGATCAAGGG 1001
Query 1030 AGTTTAAGTGCGAGGCTTTTGCATAAGG-TTAAGGAACGAGTTCTTAAGTGGTACCAAGA 1088
| | ||||| ||||| ||||| ||| ||| ||| || |||| || ||||| || ||
Sbjct 1002 AAAGTGAGTGCTAGGCTGTTGCA-GAGGATTAGGGACCGTGTTCAGAAATGGTATCATGA 1060
Query 1089 CCAAGGGTATAG-TTATGCT-AATGTTGTGAATTTTGGGAACTTGAACAGTAAGGAACTT 1146
|||||||| | || |||| || ||||||||||||||||| ||||| | |||||| ||
Sbjct 1061 TGAAGGGTAT-GCTTGTGCTCAA-GTTGTGAATTTTGGGAATTTGAATACTAAGGAGGTT 1118
Query 1147 GTTTTTGAAGTTATGGAAGGAGACATAACACAGTTGGTTATTCAGTTTCAAGATAAGCTT 1206
|||| ||||||| ||||||| || ||||| ||| | ||||||||||||||||||||||||
Sbjct 1119 GTTTGTGAAGTTGTGGAAGGTGATATAACTCAGCTAGTTATTCAGTTTCAAGATAAGCTT 1178
Query 1207 GGTAATGTAGTTGAAGGTAACACAC-AGATTCCTGTCGTGCGCAGACAAATT-CCAAAAC 1264
|||||||| |||||||| || || | || ||||||| |||||||| |||| || || |
Sbjct 1179 GGTAATGTGGTTGAAGGAAATACTCAAG-TTCCTGTGGTGCGCAG-GGAATTGCCTAAGC 1236
Query 1265 AG-TTACGTCC-AGGTC-ATGTGCTCAACA-TGAAAGTTGCGAACGAAGCTGTGAGGAAC 1320
|| || || || ||| | |||| |||||| || ||| || ||| ||||| | || |||
Sbjct 1237 AGCTT-CG-CCAAGG-CTATGTTTTCAACATTG-AAGCTGGGAAAAAAGCTCTCAGTAAC 1292
Query 1321 ATTC-ATTCTTTAGGATTGTTCTCTAACATCG-AGAT-TATGCCA-GTACCAGATGAGAA 1376
| || |||| || || ||||||||||||| | || | || ||| | |||||||||||
Sbjct 1293 A-TCAATTCATTGGGGCTGTTCTCTAACATTGAAG-TCAAT-CCACG-CCCAGATGAGAA 1348
Query 1377 AAAGGAAGGAGGTGTAATTGTTGAGGTCAAGCTTCAA-GAGGC-AGATCAGAAATCTG-T 1433
||| ||||| || | ||||||||| |||||||| || || || ||| ||||| || | |
Sbjct 1349 AAATGAAGGGGGCATTATTGTTGAGATCAAGCTT-AAGGA-GCTAGAACAGAAGTCAGCT 1406
Query 1434 AGACGTCAGTGCAGATTGGAGTATTGTTCCAGGTCCTGGAGGATATCCTTCACTGGCGTC 1493
|| |||||| |||| |||||||||||||| || | ||||||| ||| || |||| ||
Sbjct 1407 -GAAGTCAGTACAGAATGGAGTATTGTTCCTGGGCGTGGAGGAGCTCCCACATTGGCTTC 1465
Query 1494 GTTCCAGCCAAGCGGGACTGTTTCTTTCGAACATCGAAACATCAAGGGTCTTAATCGATC 1553
||||||||| | || ||||| ||||||| ||||||||| || ||||||||||| | ||
Sbjct 1466 ATTCCAGCCAGGTGGTTCTGTTACTTTCGAGCATCGAAACCTCCAGGGTCTTAATAGGTC 1525
Query 1554 TCTCATTGGTTCAGTAACCACTAGTAACTTCTTGAATCCTGAGCAGGATGATCTTTCGTT 1613
|||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1526 TCTCATGGGTTCAGTGACCACTAGCAACTTCTTGAATCCT---CAGGATGATCTTTCGTT 1582
Query 1614 TAAGCTTGAGTATGTACACCCATATCTAGACGGTGTTAACAATCCTAGAAACCGTACCTT 1673
||||||||||||||| ||||| ||||| || |||||| |||||||| | ||||| || ||
Sbjct 1583 TAAGCTTGAGTATGTGCACCCGTATCTGGATGGTGTTTACAATCCTCGGAACCGAACATT 1642
Query 1674 CAAAACGAG-TATCTTCAACAGTAGTAAACTTAGCCCAGTGTTCACTGGAGGCCCTGGAT 1732
|||||| || | ||||||||| | |||||||||||||| ||||||||||| ||||| |
Sbjct 1643 CAAAACAAGCTG-CTTCAACAGCCGCAAACTTAGCCCAGTATTCACTGGAGGACCTGG-T 1700
Query 1733 -TTGAGGAAGCAGTGGCTCCAATCTTGG-TGGATCGAGCTGGTGTGAAAGCTACTATAAC 1790
||||||||| || | ||||| |||| | || ||||||||||||||||||| ||||||
Sbjct 1701 GTTGAGGAAG---TGCCACCAAT-TTGGGTTGACCGAGCTGGTGTGAAAGCTAATATAAC 1756
Query 1791 TGAGGACTTCACACGTCAGAGTAAATTAACATATGGAGTTGTGTTGGAAGAGATAACAAC 1850
|||| ||||||| ||||||||||| || ||||||||| ||||| |||| |||||||||||
Sbjct 1757 TGAGAACTTCACCCGTCAGAGTAAGTTTACATATGGACTTGTGATGGAGGAGATAACAAC 1816
Query 1851 TAGAGATGAAAACGGGAAAATCT-CTTCAAATGGTCAG-GTTTTATTACCTAATGGAGGA 1908
||||||||| | | | || | || ||||||||||| | | | |||||| || |||
Sbjct 1817 CCGAGATGAAAGCAGTCACAT-TGCTGCAAATGGTCAGAGACT-ACTACCTAGCGGTGGA 1874
Query 1909 ATCAATGTTAATGGACCTCCAACAACTCTCAGTGGTACTGGTATTGATCGTGTAGCCTTT 1968
|||| || | |||||||||||||||||||||||||||| ||| | ||||| | || |||
Sbjct 1875 ATCAGTGCTGATGGACCTCCAACAACTCTCAGTGGTACCGGTGTCGATCGAATGGCTTTT 1934
Query 1969 CTACAAGGTAATATAACCCAAGACAACACCAAGTTTGTGAATGTAGCTA-TTGTCGGAGA 2027
||||||| || || |||| ||||| ||||| ||||| |||| || | |||| ||| |
Sbjct 1935 CTACAAGCCAACATCACCCGTGACAATACCAAATTTGTTAATGGGGC-AGTTGTTGGACA 1993
Query 2028 TAGGAA-GATCTTTCAGGTGGATCAAGGCTTAGGTATAGGAAGCAA-TTCCCCACTCTTC 2085
|||| | |||||||||| ||||| || || ||||| || ||||| ||||| |||||
Sbjct 1994 GAGGACTG-TCTTTCAGGTTGATCAGGGATTGGGTATTGGGAGCAAATTCCCGT-TCTTC 2051
Query 2086 AACCGCCATCAACTAACTTTAACAAAATTTATTCCACT-GAGACAAGTAGAAGAAGGTCC 2144
|||||||| || |||| | |||||||| |||| | | | | |||||||| |||| |
Sbjct 2052 AACCGCCACCAGTTAACCATGACAAAATTCATTC-AGTTGCGGGAAGTAGAACAAGGGGC 2110
Query 2145 CGGTAAACCGCAACCACCAGTTCTAGTTCTCCATGGCCATTACGCTGGATGTGTAGGTGA 2204
||||| | | ||||||||||||||| |||||||| ||||||| || || || || ||
Sbjct 2111 TGGTAAGTCACCACCACCAGTTCTAGTCCTCCATGGGCATTACGGAGGCTGCGTTGGCGA 2170
Query 2205 TCTACCTGGATATGATGCTTTTGCTCTT-GGAGGTCC-TAACTCTGTTCGAGGTTACA-C 2261
|| || | || |||||||||| || | || ||||| || |||||| || || |||| |
Sbjct 2171 CCTTCCAAGCTACGATGCTTTTG-TCCTCGGTGGTCCGTA-CTCTGTCCGTGGCTACAAC 2228
Query 2262 TAAGGGAGAGCTCGGTGCAGCTAGAAACATTGTCGAGGTTGGTGCTGAGGTTAGAGTACC 2321
| ||||||||||||||| ||||||||||||| |||||| ||||||||| | ||| ||||
Sbjct 2229 -ATGGGAGAGCTCGGTGCTGCTAGAAACATTGCCGAGGTCGGTGCTGAGATCAGAATACC 2287
Query 2322 TATAAAGAACACACAAGTGTATGCATTTGCTGAGCATGGAAACGATTTGGGAAGCTCAAA 2381
| ||||||||||| || || || |||| |||||||||||| ||||| |||||||||||
Sbjct 2288 CGTGAAGAACACACATGTCTACGCTTTTGTTGAGCATGGAAATGATTTAGGAAGCTCAAA 2347
Query 2382 GGATGTGAAAGGAAATCCGACCGCGGCTTT-CAGAAGAAAGGGACATGGTTCATCTTATG 2440
||||||||| ||||| || || || | | | ||| |||| ||| || |||||||| ||||
Sbjct 2348 GGATGTGAAGGGAAACCCTACAGCAG-TGTACAGGAGAACGGGTCAGGGTTCATCCTATG 2406
Query 2441 GTGTGGGTGTGAAACTTGGTCAGATACGAGCTGAATATGCTGTTGATCACAATTGTGGAA 2500
||| ||||||||||| ||| | | |||||||| |||||||| |||||||| |||||
Sbjct 2407 GTGCAGGTGTGAAACTCGGTTTGGTCCGAGCTGAGTATGCTGTAGATCACAACAATGGAA 2466
Query 2501 CCGGTGCTCTGTCTCTTCAG-TTCGGAGAAAGATATTAA 2538
|||||||||||| ||||| | || ||||| || ||||||
Sbjct 2467 CCGGTGCTCTGT-TCTTCCGATTTGGAGAGAGGTATTAA 2504
> AT4G09080.1 | Symbols: TOC75-IV, ATTOC75-IV | Outer membrane
OMP85 family protein | chr4:5803811-5806355 FORWARD LENGTH=1584
Length=1584
Score = 876 bits (474), Expect = 0.0
Identities = 842/1017 (83%), Gaps = 35/1017 (3%)
Strand=Plus/Plus
Query 1538 AGGG-TCTTAATCGA-TCTCTCATTGGTTCAGTAACCACTAGTAACTTCTTGAATCCTGA 1595
|||| || ||||| | |||||||| ||||| || |||| ||| ||| |||| |||||| |
Sbjct 325 AGGGATC-TAATC-AGTCTCTCATGGGTTCTGTGACCATTAGGAACATCTTTAATCCTAA 382
Query 1596 GCAGGATGATCTTTCGTTTAAGCTTGAGTATGTACACCCATATCTAGACGGTGTTAACAA 1655
|| ||||||||||| || |||| |||||||||| | | | ||| || | |||||| ||
Sbjct 383 GCTGGATGATCTTTTGTCTAAGATTGAGTATGT--A-CGGTTTCTGGAAGCTGTTAAAAA 439
Query 1656 TCCTAGAAACCGTACCTTCAAAACGAG-TATCTTCAACAGTAGTAAACTTAGCCCAGTGT 1714
|||||||||||||||||||||||||| | ||||||| || || ||||||||||||||||
Sbjct 440 ACCTAGAAACCGTACCTTCAAAACGAGCT-TCTTCAATAGCAGAAAACTTAGCCCAGTGT 498
Query 1715 TCACTGGAGGCCCTGGATTTGAGGAAGC-AGTGGCTCCAATCTTGGTGGATCGAGCTGGT 1773
|||||||||| || || | ||||| | | |||| ||||||| || |||| ||||| | ||
Sbjct 499 TCACTGGAGGACCAGGCTATGAGG-ATCTAGTGCCTCCAATGTTTGTGGGTCGAGATTGT 557
Query 1774 GTGAAAGCTACTATAACTGAGGACTTCACACGTCAGAGTA-AATTAACATATGGAGTTGT 1832
| |||||||||||||||||| |||| || |||||||| | || | |||||||||||| |
Sbjct 558 CTTAAAGCTACTATAACTGAGAACTTAACCCGTCAGAG-AGAACTCACATATGGAGTTAT 616
Query 1833 GTTGGAAGAGATAACAACTAGAGATGAAAACGGGAAAATCTCTTCAAATGGTCAGGTT-T 1891
||| |||||||||| ||| ||||||||||| || ||||||| |||||| | || |
Sbjct 617 GTTTGAAGAGATAATAACCCGAGATGAAAACAGGCGAATCTCTGAAAATGGGC-TCTTGT 675
Query 1892 TATTACCTAATGGAGGAATCAATGTTAATGGACCTCCAACAACTCTCAGTGGTACTGGTA 1951
||| ||| | || ||||||| | |||||||||||||||||||||| |||||||| ||||
Sbjct 676 TATCGCCTGACGGTGGAATCAGTATTAATGGACCTCCAACAACTCTAAGTGGTACCGGTA 735
Query 1952 TTGATCGTGTAGCCTTTCTACAAGGTAATATAACCCAAGACAACACCAAGTTTGTGAATG 2011
|||| | | ||| |||||||| || ||||||| ||||||||||||| | |||||||
Sbjct 736 TTGACCACATTGCCACTCTACAAGCCAACATAACCCGAGACAACACCAAGCTAGTGAATG 795
Query 2012 TAGCTATTGTCGGAGATAGGAAGATCTTTCAGGTGGATCAAGGCTTAGGTATAGGAAGCA 2071
||| |||| ||||| | ||| |||||||||||||||||||||||||||||||||| |
Sbjct 796 GGGCTGTTGTTGGAGAGAAGAATATCTTTCAGGTGGATCAAGGCTTAGGTATAGGAAATA 855
Query 2072 ATTCCCCACTCTTCAACCGCCATCAACTAACTTTAACAAAATTT-ATTCCA-CTG-AGAC 2128
||| || |||||||||||||| |||||| | ||||| || ||| ||| || ||| || |
Sbjct 856 ATTTTCCGCTCTTCAACCGCCACCAACTATCATTAAC-AAGTTTCATT-CAGCTGAAG-C 912
Query 2129 AAGTAGAAGAAGG-TCCCGGTAAACCGCAACCACCAGTTCTAGTTCTCCATGGCCATTAC 2187
||||||||||||| | ||| |||||| ||||||||||||||||| |||||||| | ||||
Sbjct 913 AAGTAGAAGAAGGAT-CCGATAAACCACAACCACCAGTTCTAGTCCTCCATGGTCGTTAC 971
Query 2188 GCTGGATGTGTAGGTGATCTACCTGGATATGATGCTTTTGCTCTTGGAGGTCCTAACTCT 2247
| ||| || |||| ||||| || | ||||||| |||||||||||| || ||||||||
Sbjct 972 GGTGGCTGCATAGGCGATCTTCCAAGCTATGATGTTTTTGCTCTTGGTGGACCTAACTCC 1031
Query 2248 GTTCGAGGTTACA-CTAAGGGAGAGCTCGGTGCAGCTAGAAACATTGTCGAGGTTGGTGC 2306
|||||||| |||| | | |||||| || |||||||||| ||||||| ||||| |||||||
Sbjct 1032 GTTCGAGGATACAGC-ATGGGAGAACTTGGTGCAGCTAAAAACATTCTCGAGCTTGGTGC 1090
Query 2307 TGAGGTTAGAGTACCTATAAAGAACACACAAGTGTATGCATTTGCTGAGCATGGAAACGA 2366
|||| ||||| | ||| | ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1091 TGAGATTAGAATTCCTGTCAAGAACACACATGTGTATGCATTTGCTGAGCATGGAAACGA 1150
Query 2367 TTTGGGAAGCTCAAAGGATGTGAAAGGAAATCCGACCGCGGCTTT-CAGAAGAAA-GGGA 2424
||||||||| ||||||||||||||||| ||||| || | |||||| ||| | ||| ||||
Sbjct 1151 TTTGGGAAGTTCAAAGGATGTGAAAGGGAATCCAACAG-GGCTTTACAGGA-AAATGGGA 1208
Query 2425 CATGGTTCATCTTATGGTGTGGGTGTGAAACTTGGTCA-GATACGAGCTGAATATGCTGT 2483
||||||||||| |||||| ||||||||||||| ||| | | | |||||||||||| ||||
Sbjct 1209 CATGGTTCATCGTATGGTTTGGGTGTGAAACTCGGT-ATGGTGCGAGCTGAATATACTGT 1267
Query 2484 T-GATCACAATTGTGGAACCGGTGCTCTGTCTCTTCAG-TTCGGAGAAAGATATTAA 2538
| ||||||| |||||||||||||||||| ||| ||| ||||| || ||||| |||
Sbjct 1268 ACG-TCACAATCGTGGAACCGGTGCTCTGTTTCT-CAGGTTCGGGGAGAGATACTAA 1322
> AT1G35860.1 | Symbols: TOC75-I | translocon outer membrane complex
75-I | chr1:13332047-13334050 REVERSE LENGTH=1200
Length=1200
Score = 654 bits (354), Expect = 0.0
Identities = 452/499 (91%), Gaps = 7/499 (1%)
Strand=Plus/Plus
Query 1275 AGGTCATGTGCTCAACATGAAAGTTGCGAACGAAGCTGTGAGGAACATTCATTCTTTAGG 1334
|||||||||||||||||| ||||||| | |||||||||| ||||||||||| ||||||||
Sbjct 288 AGGTCATGTGCTCAACATAAAAGTTGTGCACGAAGCTGTTAGGAACATTCACTCTTTAGG 347
Query 1335 ATTGTTCTCTAACATCGAGATTATGCCAGTACCAGATGAGAAAAAGGAAGGAGGTGTAAT 1394
|||||||| || |||||||| |||||| | ||| ||||||||| |||||||||||||||
Sbjct 348 CTTGTTCTCAAATATCGAGATCATGCCAATTCCAAATGAGAAAAGGGAAGGAGGTGTAAT 407
Query 1395 TGTTGAGGTCAAGCTTCAAGAGGCAGATCAGAAATCTGTAGACG-TCAGTGCAGATTGGA 1453
|||||||||||||||||||||| ||||||| ||||| ||||| | | ||||||||| |||
Sbjct 408 TGTTGAGGTCAAGCTTCAAGAGACAGATCAAAAATCAGTAGAAGGT-AGTGCAGATCGGA 466
Query 1454 GTATTGTTCCAGGTCCTGGAGGATATCCTTCACTGGCGTCGTTC-CAGCCAAGCGGGACT 1512
|||||||||| | ||| ||||||||||||||| |||| || ||| |||||||||||||||
Sbjct 467 GTATTGTTCCTGATCCCGGAGGATATCCTTCATTGGCTTC-TTCTCAGCCAAGCGGGACT 525
Query 1513 GTTTCTTTCGAACATCGAAACATCAAGGGTCTTAATCGATCTCTCATTGGTTCAGTAACC 1572
||||||||||||||| ||||||||||||||||||||||||||| || |||||| || ||
Sbjct 526 ATTTCTTTCGAACATCCAAACATCAAGGGTCTTAATCGATCTCTTATAGGTTCAATAGCC 585
Query 1573 ACTAGTAACTTCTTGAATCCTGAGCAGGATGATCTTTCGTTTAAGCTTGAGTATGTACAC 1632
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 586 ACTAGTAACTTCTTGAATCCTGAG--G-ATGATCTTTCGTTTAAGCTTGAGTATGTACAT 642
Query 1633 CCATATCTAGACGGTGTTAACAATCCTAGAAACCGTACCTTCAAAACGAGTATCTTCAAC 1692
|||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||
Sbjct 643 CCATATCTAGACGGTGTTTCCAATCCTAGAAACCGTACCTTCAAAACAAGCATCTTCAAC 702
Query 1693 AGTAGTAAACTTAGCCCAGTGTTCACTGGAGGCCCTGGATTTGAGGAAGCAGTGGCTCCA 1752
||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||
Sbjct 703 AGTAGTAAACTTAGCTCAGTACTCACTGGAGGACCTGGATTTGAGGAAGCAGTGGCACCA 762
Query 1753 ATCTTGGTGGATCGAGCTG 1771
|||||| ||||||||||||
Sbjct 763 ATCTTGATGGATCGAGCTG 781
Score = 353 bits (191), Expect = 4e-96
Identities = 216/228 (95%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 997 CGAGAGGCGATGCTTATGCTAAGGGATCAAAGGAGTTTAAGTGCGAGGCTTTTGCATAAG 1056
|||||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 65 CGAGAGGCAATGCATATGCTAAGAGATC-AAGGAGTTTAAGTGCGAGGCTTTTGCATAAG 123
Query 1057 GTTAAGGAACGAGTTCTTAAGTGGTACCAAGACCAAGGGTATAGTTATGCTAATGTTGTG 1116
|||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||
Sbjct 124 GTTAAGGAACGAGTTCTTAAATGGTACCCAGACCAAGGGTATAGTTTTGCTAATGTTGTG 183
Query 1117 AATTTTGGGAACTTGAACAGTAAGGAACTTGTTTTTGAAGTTATGGAAGGAGACATAACA 1176
| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 184 AGTTTTGGTAACTTGAACAGTAAGGAACTTATTTTTGAAGTTATGGAAGGAGACATAACT 243
Query 1177 CAGTTGGTTATTCAGTTTCAAGATAAGCTTGGTAATGTAGTTGAAGGT 1224
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 244 CAGTTGGTTATTCAGTTTCAAGATAAGCTTGGTAATGTAGCTGAAGGT 291
Score = 344 bits (186), Expect = 2e-93
Identities = 243/269 (90%), Gaps = 9/269 (3%)
Strand=Plus/Plus
Query 2198 TAGGTGATCTACCTGGATATGATGCTTTTGCTCTTGGAGGTCCTAACTCTGTTCGAGGTT 2257
||||||||||||| || |||||||||||| |||||||||||||||||| ||||| | |
Sbjct 932 TAGGTGATCTACCAGGCTATGATGCTTTTTCTCTTGGAGGTCCTAACTATGTTC---GCT 988
Query 2258 ACACTAAGGGAGAGCTCGGTGCAGCTAGAAACATTGTC--G----AGGTTGGTGCTGAGG 2311
|||||||||||||||| ||||||||||||||||||||| | ||||||||||||||
Sbjct 989 ACACTAAGGGAGAGCTTGGTGCAGCTAGAAACATTGTCGAGCTAAAGGTTGGTGCTGAGC 1048
Query 2312 TTAGAGTACCTATAAAGAACACACAAGTGTATGCATTTGCTGAGCATGGAAACGATTTGG 2371
|||||||| | | ||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 1049 TTAGAGTAAATGTGAAGAATACACAAGGGTATGCATTTGCTGAGCATGGAAACGATTTGG 1108
Query 2372 GAAGCTCAAAGGATGTGAAAGGAAATCCGACCGCGGCTTTCAGAAGAAAGGGACATGGTT 2431
|||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 1109 GAAGCTCAAAGGATATGAAAGGGAATCCGACCGCGGCTTTCAGAAGAGAGGGACATGGTT 1168
Query 2432 CATCTTATGGTGTGGGTGTGAAACTTGGT 2460
||||||||||||||||| |||||||||||
Sbjct 1169 CATCTTATGGTGTGGGTATGAAACTTGGT 1197
> AT1G35880.1 | Symbols: | unknown protein; Has 251 Blast hits
to 234 proteins in 66 species: Archae - 2; Bacteria - 48; Metazoa
- 87; Fungi - 9; Plants - 70; Viruses - 0; Other Eukaryotes
- 35 (source: NCBI BLink). | chr1:13339851-13341228 REVERSE
LENGTH=669
Length=669
Score = 532 bits (288), Expect = 5e-150
Identities = 481/568 (85%), Gaps = 38/568 (7%)
Strand=Plus/Plus
Query 1 ATGCCCACAATCTCCCTCAACGGCCAGCTTATCGCGGCGCCGATAGTTTACACCACCGCT 60
|||||||||||| |||||||||||||||||||||||| ||| |||| |||||| ||||||
Sbjct 101 ATGCCCACAATCGCCCTCAACGGCCAGCTTATCGCGG-GCCTATAGCTTACACTACCGCT 159
Query 61 TCTTCTTATCTCTCTTCTCGCCGTCAATATTATCCCT-TATCTTCCTCTCGCGAACTTCG 119
||||||||||||||||||| ||||||||| || |||| ||||||| |||| | ||||||
Sbjct 160 TCTTCTTATCTCTCTTCTCACCGTCAATA-TAACCCTCTATCTTCTTCTCCCAAACTTCA 218
Query 120 TTTCAACGCATCTTCTTCCTCTCGCTTCAAATCCTTAACTTGCTCAGCAAACTTACCT-A 178
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | |
Sbjct 219 TTTCATCGCATCTTCTTCCCCTCGCTTCAAATCCTTAACTTGCTCAGCAAACTTACATTA 278
Query 179 CTCGGAAGAAGATCGAACCTTCCTCCAACAA-TGTTCTTGTTAAATC-TTTGTCGAAATC 236
|||||||||||| || ||||| ||||| || | |||| |||| || |||| |||||||
Sbjct 279 -TCGGAAGAAGATTGAGCCTTCATCCAAAAAAT-TTCTCCTTAACTCATTTG-CGAAATC 335
Query 237 TTT---CGTCTTCTGT-TCCTCCGCTAAGCCGAAGGATTCGTCCAACTGT-AATCCCCGT 291
||| ||||| ||| ||||||||||||||||| ||||||||||| ||| |||| ||||
Sbjct 336 TTTTATCGTCT-CTGCGTCCTCCGCTAAGCCGAAAGATTCGTCCAA-TGTTAATCTCCGT 393
Query 292 AAGCCACTTGCGATATCTCTCGTAGTCACCT-CTGTTTCCTCCGCCGCGGCTCTGTTTCT 350
||||||||||||||||||||||| ||||| | ||||||| ||| |||| | |||||||
Sbjct 394 AAGCCACTTGCGATATCTCTCGTCGTCAC-TACTGTTTCTTCCTCCGCATATGTGTTTCT 452
Query 351 TCCACGACTATTTTCTCT--CCTGTCGATTGTAAGAGGCGGCGGCggaggaggaaaagga 408
|| |||||| |||||||| ||| ||||| ||| | | | |||||||||||| |||
Sbjct 453 TCTACGACTCTTTTCTCTTGCCT--CGATTCTAA-ATG-GT-GGCGGAGGAGGAG--GGA 505
Query 409 ggt-ggacgtggaggaggagggaa-tttcggtggag-a-----tggcggattttggagga 460
| || |||||||||||||||| ||| ||||||| | ||||||||||||||||
Sbjct 506 ATTTGG--GTGGAGGAGGAGGGAAATTT-GGTGGAGGAGGAGATGGCGGATTTTGGAGGG 562
Query 461 AATTGTTTTCTCTGGCAGTACCAGTGGCTGTCGCCGACGAAGAACAGTCACCGGATTGGG 520
||||||| |||||||| ||||||||||| ||||| |||||||||| |||| |||||||
Sbjct 563 GATTGTTTGCTCTGGCAATACCAGTGGCTATCGCCAACGAAGAACACTCACATGATTGGG 622
Query 521 ATTCTCACGGTTTACCGGCGAACATTGT 548
||||| |||||||||| |||||||||||
Sbjct 623 ATTCTTACGGTTTACCAGCGAACATTGT 650
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 125969193873
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5